Predicted mutation
evidence seq id position mutation annotation gene description
JC NZ_CP025268 4,492,041 +ATACGTGTAAT intergenic (‑52/+15) yjgR ← / ← idnR DUF853 domain‑containing protein/DNA‑binding transcriptional regulator IdnR

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NZ_CP025268 = 44920415 (0.010)660 (1.060)
+ATACGTGTAAT
138/252 0.1 99.3% intergenic (‑52/+15) yjgR/idnR DUF853 domain‑containing protein/DNA‑binding transcriptional regulator IdnR
?NZ_CP025268 4492042 = 5 (0.010)intergenic (‑53/+14) yjgR/idnR DUF853 domain‑containing protein/DNA‑binding transcriptional regulator IdnR

Only 100 of 740 total aligned reads displayed.

GTAATCAGCCCATGACGGTTAGCCATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAGAAGAGAAAATAACTTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAATATCAAAACGGGGAGTAAT  >  NZ_CP025268/4491904‑4492181
                                                                                                                                          |                                                                                                                                           
atgacggttagcctttcccggcagtaaaaacagttctgtgtccggcgtgcgggcaattaacaggggttcactcatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGa                                                                                                                                            >  1:10018588‑M2/139‑140 (MQ=255)
atgacggttagccattcccggcagtaaaaacagttctgtgtccggcgtgcgggcaattaacaggggttcactcatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGa                                                                                                                                            >  1:2630761‑M2/139‑140 (MQ=255)
  gacggttagccattcccggcagtaaaaacagttctgtgtccggcgtgcgggcaattaacaggggttcactcatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAag                                                                                                                                          >  2:10026179‑M2/137‑140 (MQ=255)
  gacggttagccattcccggcagtaaaaacagttctgtgtccggcgtgcgggcaattaacaggggttcactcatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAag                                                                                                                                          >  1:1242102‑M2/137‑140 (MQ=255)
   acggttagccattcccggcagtaaaaacagttctgtgtccggcgtgcgggcaattaacaggggttcactcatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAaga                                                                                                                                         <  1:4805852‑M2/5‑1 (MQ=255)
   acggttagccattcccggcagtaaaaacagttctgtgtccggcgtgcgggcaattaacaggggttcactcatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAaga                                                                                                                                         <  1:2182569‑M2/5‑1 (MQ=255)
       ttagccattcccggcagtaaaaacagttctgtgtccggcgtgcgggcaattaacaggggttcactcatgagatatcctccagtttcctgcctggagtataggcaacgtgcggcaatgagaatacgtgtaatGTCGAGaaa                                                                                                                                     >  1:9183398‑M2/132‑140 (MQ=255)
       ttagccattcccggcagtaaaaacagttctgtgtccggcgtgcgggcaattaacaggggttcactcatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGaaa                                                                                                                                     >  2:6113476‑M2/132‑140 (MQ=255)
       ttagccattcccggcagtaaaaacagttctgtgtccggcgtgcgggcaattaacaggggttcactcatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGaaa                                                                                                                                     >  2:11445928‑M2/132‑140 (MQ=255)
       ttagccattcccggcagtaaaaacagttctgtgtccggcgtgcgggcaattaacaggggttcactcatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGaaa                                                                                                                                     >  1:9343779‑M2/132‑140 (MQ=255)
           ccattcccggcagtaaaaacagttctgtgtccggcgtgcgggcaattaacaggggttcactcatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATaa                                                                                                                                 >  2:4791282‑M2/128‑140 (MQ=255)
               tcccggcagtaaaaacagttctgtgtccggcgtgcgggcaattaacaggggttcactcatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTa                                                                                                                             >  1:10169739‑M2/124‑140 (MQ=255)
                   ggcagtaaaaacagttctgtgtccggcgtgcgggcaattaacaggggttcactcatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgggtaatGAAGCGAAAATAACCTAACGc                                                                                                                         >  2:1951085‑M2/120‑140 (MQ=255)
                       gtaaaaacagttctgtgtccggcgtgcgggcaattaacaggggttcactcatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCgtgt                                                                                                                     >  2:4940553‑M2/116‑140 (MQ=255)
                        taaaaacagttctgtgtccggcgtgcgggcaattaacaggggttcactcatgagatatcctctagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTa                                                                                                                             <  2:11617003‑M2/17‑1 (MQ=255)
                        taaaaacagttctgtgtccggcgtgcgggcaattaacaggggttcactcatgagatatcctctagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTa                                                                                                                             >  1:11617004‑M2/115‑131 (MQ=255)
                        taaaaacagttctgtgtccggcgtgcgggcaattaacaggggttcactcatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGtt                                                                                                                    >  1:3459674‑M2/115‑140 (MQ=255)
                          aaaacagttctgtgtccggcgtgcgggcaattaacaggggttcactcatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGc                                                                                                                  <  2:249926‑M2/28‑1 (MQ=255)
                                gttctgtgtccggcgtgcgggcaattaacaggggttcactcatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGAt                                                                                                            <  1:1733656‑M2/34‑1 (MQ=255)
                                  tctgtgtccggcgtgcgggcaattaacaggggttcactcatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATaa                                                                                                          <  2:2816021‑M2/36‑1 (MQ=255)
                                  tctgtgtccggcgtgcgggcaattaacaggggttcactcatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATaa                                                                                                          >  1:5976950‑M2/105‑140 (MQ=255)
                                      tgtccggcgtgcgggcaattaacaggggttcactcatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCt                                                                                                      >  1:5696763‑M2/101‑140 (MQ=255)
                                      tgtccggcgtgcgggcaattaacaggggttcactcatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCt                                                                                                      >  1:4127656‑M2/101‑140 (MQ=255)
                                      tgtccggcgtgcgggcaattaacaggggttcactcatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCt                                                                                                      >  1:4305872‑M2/101‑140 (MQ=255)
                                           ggcgtgcgggcaattaacaggggttcactcatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTACAGCGTGTTGCCGTGATAAATCTGATAc                                                                                                 <  2:5869374‑M2/45‑1 (MQ=255)
                                           ggcgtgcgggcaattaacaggggttcactcatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATAc                                                                                                 >  1:328960‑M2/96‑140 (MQ=255)
                                             cgtgcgggcaattaacaggggttcactcatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATAccc                                                                                               <  1:9706187‑M2/47‑1 (MQ=255)
                                             cgtgcgggcaattaacaggggttcactcatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATAccc                                                                                               >  1:447814‑M2/94‑140 (MQ=255)
                                             cgtgcgggcaattaacaggggttcactcatgagatatcctccagtttcctgcctggaggataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATAccc                                                                                               <  2:7340688‑M2/47‑1 (MQ=255)
                                               tgcgggcaattaacaggggttcactcatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGa                                                                                             >  2:3807391‑M2/92‑140 (MQ=255)
                                                gcgggcaattaacaggggttcactcatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAg                                                                                            <  1:10284810‑M2/50‑1 (MQ=255)
                                                  gggcaattaacaggggttcactcatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGt                                                                                          <  2:1329649‑M2/52‑1 (MQ=255)
                                                  gggcaattaacaggggttcactcatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTAGCCGTGATAAATCTGATACCCGAGGt                                                                                          <  1:3776347‑M2/52‑1 (MQ=255)
                                                     caattaacaggggttcactcatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTACAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCaa                                                                                       <  2:1050935‑M2/55‑1 (MQ=255)
                                                     caattaacaggggttcactcatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCaa                                                                                       <  1:3679085‑M2/55‑1 (MQ=255)
                                                     caattaacaggggttcactcatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCaa                                                                                       <  2:4617209‑M2/55‑1 (MQ=255)
                                                     caattaacaggggttcactcatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCaa                                                                                       <  1:10566142‑M2/55‑1 (MQ=255)
                                                       attaacaggggttcactcatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACa                                                                                     <  2:3340959‑M2/57‑1 (MQ=255)
                                                        ttaacaggggttcactcatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAg                                                                                    <  1:5103929‑M2/58‑1 (MQ=255)
                                                        ttaacaggggttcactcatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAg                                                                                    <  1:8908888‑M2/58‑1 (MQ=255)
                                                        ttaacaggggttcactcatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAg                                                                                    <  1:6135500‑M2/58‑1 (MQ=255)
                                                        gtaacaggggttcactcatgagatatcctccagtttcctgccgggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAg                                                                                    <  1:2460179‑M2/58‑1 (MQ=255)
                                                          aacaggggttcactcatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAgtg                                                                                  <  1:3996814‑M2/60‑1 (MQ=255)
                                                              ggggttcactcatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGtgttgt                                                                              >  1:11497507‑M2/77‑140 (MQ=255)
                                                                ggtacacacatgagatatcctccagtttcctgcctggagtaaagtcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGACGTGATAAATCTGATACCCGAGGTCAACAGtgttgtgt                                                                            >  2:5237341‑M2/75‑139 (MQ=255)
                                                                  ttcactcatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTgttgtggtt                                                                          >  2:5367717‑M2/73‑140 (MQ=255)
                                                                  ttcactcatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaaaacgtgtaatGAAGAGAAAAAAACCTCAAGCGTGTAGCCGTGATAAATCTGATACCCGAGGTCAACAGTgttgtggtt                                                                          >  2:3192246‑M2/73‑140 (MQ=255)
                                                                  gtcactcaagagatatcctccaggttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTgttgtggtt                                                                          <  2:10203758‑M2/68‑1 (MQ=255)
                                                                     actcatgagatatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTgttgtggttgtg                                                                       >  1:7734020‑M2/70‑140 (MQ=255)
                                                                              atatcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTAtt                                                              <  1:8164790‑M2/80‑1 (MQ=255)
                                                                                atcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTACAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTAtttt                                                            <  2:6674958‑M2/82‑1 (MQ=255)
                                                                                atcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGGTGTGATCGTTAtttt                                                            >  2:8496523‑M2/59‑140 (MQ=255)
                                                                                 tcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtactGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTAttttt                                                           >  1:7511977‑M2/58‑140 (MQ=255)
                                                                                 tcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGATGTCAACAGTGTTGTGGTGTTGATCGTTAttttt                                                           >  2:9097862‑M2/58‑140 (MQ=255)
                                                                                 tcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCg                                                                   >  1:6462081‑M2/58‑132 (MQ=255)
                                                                                 tcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTAttttt                                                           >  1:3140693‑M2/58‑140 (MQ=255)
                                                                                 tcctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCAGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTAttttt                                                           >  1:7042232‑M2/58‑140 (MQ=255)
                                                                                   ctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTaa                                                         >  1:8836279‑M2/56‑140 (MQ=255)
                                                                                   ctccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGACGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTaa                                                         >  2:2157261‑M2/56‑140 (MQ=255)
                                                                                     ccagtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAAtt                                                       >  2:9358632‑M2/54‑140 (MQ=255)
                                                                                        gtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTg                                                    >  2:9837702‑M2/51‑140 (MQ=255)
                                                                                        gtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTg                                                    >  1:7218891‑M2/51‑140 (MQ=255)
                                                                                        gtttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTg                                                    >  2:10385015‑M2/51‑140 (MQ=255)
                                                                                         tttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGc                                                   <  1:1496314‑M2/91‑1 (MQ=255)
                                                                                         tttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGc                                                   >  1:11243903‑M2/50‑140 (MQ=255)
                                                                                          ttcctgcctggagtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCt                                                  <  1:11131325‑M2/92‑1 (MQ=255)
                                                                                                     agtataggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACAttt                                       >  1:8474341‑M2/38‑140 (MQ=255)
                                                                                                          aggcaacgtcctgcaaagagaatacgtgtaatTTAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTTTTATCGTTATTTTTAATTTTGATCAGCAAAATTTGcgcg                                  >  2:8380285‑M2/33‑140 (MQ=255)
                                                                                                          aggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAACGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGggcg                                  <  2:10970047‑M2/108‑1 (MQ=255)
                                                                                                          aggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGggcg                                  >  2:5525081‑M2/33‑140 (MQ=255)
                                                                                                           ggcaacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGggcgg                                 <  1:4704862‑M2/109‑1 (MQ=255)
                                                                                                              aacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCa                              >  1:3048634‑M2/29‑140 (MQ=255)
                                                                                                              aacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCa                              >  2:6773904‑M2/29‑140 (MQ=255)
                                                                                                              aacgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCa                              >  2:11225151‑M2/29‑140 (MQ=255)
                                                                                                               acgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATCCCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCAt                             <  2:1838949‑M2/113‑1 (MQ=255)
                                                                                                               acgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCAt                             >  2:8722033‑M2/28‑140 (MQ=255)
                                                                                                               acgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCAt                             >  1:10862569‑M2/28‑140 (MQ=255)
                                                                                                               acgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCAt                             >  1:2914698‑M2/28‑140 (MQ=255)
                                                                                                               acgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCAt                             <  1:8615985‑M2/113‑1 (MQ=255)
                                                                                                               acgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCAt                             <  1:5387110‑M2/113‑1 (MQ=255)
                                                                                                                cgtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTggg                                    <  1:1920788‑M2/106‑1 (MQ=255)
                                                                                                                 gtccggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATcc                           >  2:10739608‑M2/26‑140 (MQ=255)
                                                                                                                 gtccgacaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATATTGCTCAGCAACATTTGGGCGGCCATcc                           >  1:7848163‑M2/26‑140 (MQ=255)
                                                                                                                    cggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGAc                        <  2:1598195‑M2/118‑1 (MQ=255)
                                                                                                                    cggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGAc                        <  2:7153842‑M2/118‑1 (MQ=255)
                                                                                                                     ggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGAcc                       <  1:6861397‑M2/119‑1 (MQ=255)
                                                                                                                     ggcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGAcc                       <  2:4315261‑M2/119‑1 (MQ=255)
                                                                                                                      gcacagagaatacgtgtaagGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGGGTTGTGGTTGTGATCGATATTTTTAATTTTGCGCAGCATCATTTGGGCGGCCATCCGACCa                      >  2:8123468‑M2/21‑140 (MQ=255)
                                                                                                                      gcaaagagaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCt                                                  <  2:788315‑M2/92‑1 (MQ=255)
                                                                                                                            agaatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTAGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAATATCa                >  1:8312733‑M2/15‑140 (MQ=255)
                                                                                                                              aatacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAATATCaaa              >  2:3016475‑M2/13‑140 (MQ=255)
                                                                                                                               atacgtgtaatGAAGAGAAAATAACATAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAATATCaaaa             <  2:10817704‑M2/129‑1 (MQ=255)
                                                                                                                                tacgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGATGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAATATCAAAAc            <  2:357466‑M2/130‑1 (MQ=255)
                                                                                                                                 acgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAATATCAAAACg           <  2:9574976‑M2/131‑1 (MQ=255)
                                                                                                                                 acgtgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAATATCAAAACg           <  2:1468548‑M2/131‑1 (MQ=255)
                                                                                                                                    tgtaatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAATATCAAAACgggg        >  1:6533283‑M2/7‑140 (MQ=255)
                                                                                                                                      taatGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGTGCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAATATCAAAACGGGGAg      >  1:7993655‑M2/5‑140 (MQ=255)
                                                                                                                                        atGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAATATCAAAACGGGGAgtc    >  2:6372915‑M2/3‑139 (MQ=255)
                                                                                                                                        atGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAATATCAAAACGGGGAGTa    >  1:10640733‑M2/3‑140 (MQ=255)
                                                                                                                                        atGAAGAGAAAATAACCTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAATATCAAAACGGGGAGTa    >  2:7646261‑M2/3‑140 (MQ=255)
                                                                                                                                          |                                                                                                                                           
GTAATCAGCCCATGACGGTTAGCCATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAGAAGAGAAAATAACTTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAATATCAAAACGGGGAGTAAT  >  NZ_CP025268/4491904‑4492181

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.