BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NZ_CP025268	1,588,591	A→G	L63S (TTG→TCG)	safA ←	two‑component system connector SafA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NZ_CP025268	1,588,591	0	A	G	100.0%	1086.7 / NA	311	L63S (TTG→TCG)	safA	two‑component system connector SafA
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (222/89); total (222/89)

Only 100 of 313 total aligned reads displayed.

ATGTTAGCGTTGAAGGCATGATGAATAAATATAACAGAACAAACGAGCGACATTTTATCTCCTTAAAACAATAAAGTTTTTATCGATACTTTTTTAACATTTCATATTTATAATTTGCTGTTTGTTTTCAGCCTTGCAAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGACAACCACAATTGCAGACATGATTTC  >  NZ_CP025268/1588454‑1588727

            aaGGCATTATGAATAAATATAACAGAACAAACGAGCGACATTTTATCTCCTTAAAACAATAAAGTTTTTATCGATACTTTTTTAACATTTCATATTTATAATTTGCTGTTTGTTTTCAGCCTTGCGAACTATTGATAATg                                                                                                                            <  2:8546657/140‑1 (MQ=255)

             aGGCATGATGAATAAATATAACAGAACAAACGAGCGACATTTTATCTCCTTAAAACAATAAAGTTTTTATCGATACTTTTTTAACATTTCATATTTATAATTTGCTGTTTGTTTTCAGCCTTGCGAACTATTGATAATGa                                                                                                                           <  2:8251267/140‑1 (MQ=255)

              ggCATGATGAATAAATATAACAGAACAAACGAGCGACATTTTATCTCCTTAAAACAATAAAGTTTTTATCGATACTTTTTTAACATTTCATATTTATAATTTGCTGTTTGTTTTCAGCCTTGCGAACTATTGATAATGaa                                                                                                                          <  1:9145885/140‑1 (MQ=255)

                 atgatgAATAAATATAACAGAACAAACGAGCGACATTTTATCTCCTTAAAACAATAAAGTTTTTATCGATACTTTTTTAACATTTCATATTTATAATTTGCTGTTTGTTTTCAGCCTTGCGAACTATTg                                                                                                                                  >  1:3600596/1‑129 (MQ=255)

                   gatgaATAAATATAACAGAACAAACGAGCGACATTTTATCTCCTTAAAACAATAAAGTTTTTATCGATACTTTTTTAACATTTCATATTTATAATTTGCTGTTTGTTTTCAGCCTTGCGAACTATTGATAATGAAAtgtg                                                                                                                     >  2:9599305/1‑140 (MQ=255)

                     tgaATAAATATAACAGAACAAACGAGCGACATTTTATCTCCTTAAAACAATAAAGTTTTTATCGATACTTTTTTAACATTTCATATTTATAATTTGCTGTTTGTTTTCAGCCTTGCGAACTATTGATAATGAAATGTGTa                                                                                                                   <  2:11323475/140‑1 (MQ=255)

                       aataaataTAACAGAACAAACGAGCGACATTTTATCTCCTTAAAACAATAAAGTTTTTATCGATACTTTTTTAACATTTCATATTTATAATTTGCTGTTTGTTTTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAg                                                                                                                 >  2:12649/1‑140 (MQ=255)

                       aataaataTAACAGAACAAACGAGCGACATTTTATCTCCTTAAAACAATAAAGTTTTTATCGATACTTTTTTAACATTTCATATTTATAATTTGCTGTTTGTTTTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAg                                                                                                                 <  2:11513136/140‑1 (MQ=255)

                       aataaataTAACAGAACAAACGAGCGACATTTTATCTCCTTAAAACAATAAAGTTTTTATCGATACTTTTTTAACATTTCATATTTATAATTTGCTGTTTGTTTTCAGCATTGCGAACTATTGATAATGAAATGTGTAAg                                                                                                                 >  2:7662902/1‑140 (MQ=255)

                        ataaataTAACAGAACAAACGAGCGACATTTTATCTCCTTAAAACAATAAAGTTTTTATCGATACTTTTTTAACATTTCATATTTATAATTTGCTGTTTGTTTTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGa                                                                                                                <  2:8355715/140‑1 (MQ=255)

                         taaataTAACAGAACAAACGAGCGACATTTTATCTCCTTAAAACAATAAAGTTTTTATCGATACTTTTTTAACATTTCATATTTATAATTTGCTGTTTGTTTTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGAt                                                                                                               <  2:4142688/140‑1 (MQ=255)

                              ataACAGAACAAACGAGCGACATTTTATCTCCTTAAAACAATAAAGTTTTTATCGATACTTTTTTAACATTTCATATTTATGATTTGCTGTTTGTTTTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCtt                                                                                                          >  1:10342349/1‑140 (MQ=255)

                                 aCAGAACAAACGAGCGACATTTTATCTCCTTAAAACAATAAAGTTTTTATCGATACTTTTTTAACATTTCATATTTATAATTTGCTGTTTGTTTTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCa                                                                                                       >  1:8211905/1‑140 (MQ=255)

                                     aaCAAACGAGCGACATTTTATCTCCTTAAAACAATAAAGTTTTTATCGATACTTTTTTAACATTTCATATTTATAATTTGCTGTTTGTTTTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGc                                                                                                   >  1:6085214/1‑140 (MQ=255)

                                       cAAACGAGCGACATTTTATCTCCTTAAAACAATAAAGTTTTTATCGATACTTTTTTAACATTTCATATTTATAATTTGCTGTTTGTTTTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGa                                                                                                 >  1:7519800/1‑140 (MQ=255)

                                         aaCGAGCGACATTTTATCTCCTTAAAACAATAAAGTTTTTATCGATACTTTTTTAACATTTCATATTTATAATTTGCTGTTTGTTTTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGAcc                                                                                               <  1:9790722/140‑1 (MQ=255)

                                         aaCGAGCGACATTTTATCTCCTTAAAACAATAAAGTTTTTATCGATACTTTTTTAACATTTCATATTTATAATTTGCTGTTTGTTTTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGAcc                                                                                               <  2:4742004/140‑1 (MQ=255)

                                          aCGAGCGACATTTTATCTCCTTAAAACAATAAAGTTTTTATCGATACTTTTTTAACATTTCATATTTATAATTTGCTGTTTGTTTTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGAccc                                                                                              >  1:6173664/1‑140 (MQ=255)

                                          aCGAGCGACATTTTATCTCCTTAAAACAATAAAGTTTTTATCGATACTTTTTTAACATTTCATATTTATAATTTGCTGTTTGTTTTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGAccc                                                                                              <  1:9529901/140‑1 (MQ=255)

                                            gAGCGACATTTTATCTCCTTAAAACAATAAAGTTTTTATCGATACTTTTTTAACATTTCATATTTATAATTTGCTGTTTGTTTTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCAt                                                                                            <  2:7209/140‑1 (MQ=255)

                                                      ttATCTCCTTAAAACAATAAAGTTTTTATCGATACTTTTTTAACATTTCATATTTATAATTTGCTGTTTGTTTTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATa                                                                                  <  1:6725019/140‑1 (MQ=255)

                                                            ccTTAAAACAATAAAGTTTTTATCGATACTTTTTTAACATTTCATATTTATAATTTGCTGTTTGTTTTCAGCCTTGCGAACTATTGATAATGAAATGGGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGc                                                                            >  1:9987182/1‑140 (MQ=255)

                                                                       tAAAGTTTTTATCGATACTTTTTTAACATTTCATATTTATAATTTGCTGTTTGTTTTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTg                                                                                       <  2:10237083/118‑1 (MQ=255)

                                                                       tAAAGTTTTTATCGATACTTTTTTAACATTTCATATTTATAATTTGCTGTTTGTTTTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGc                                                                 >  1:4639489/1‑140 (MQ=255)

                                                                       tAAAGTTTTTATCGATACTTTTTTAACATTTCATATTTATAATTTGCTGTTTGTTTTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGc                                                                 >  1:11416013/1‑140 (MQ=255)

                                                                       tAAAGTTTTTATCGATACTTTTTTAACATTTCATATTTATAATTTGCTGTTTGTTTTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGc                                                                 >  1:11523728/1‑140 (MQ=255)

                                                                       tAAAGTTTTTATCGATACTTTTTTAACATTTCATATTTATAATTTGCTGTTTGTTTTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGc                                                                 >  1:3324725/1‑140 (MQ=255)

                                                                                tATCGATACTTTTTTAACATTTCATATTTATAATTTGCTGTTTGTTTTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAAt                                                        <  2:2855920/140‑1 (MQ=255)

                                                                                      tACTTTTTTAACATTTCATATTTATAATTTGCTGTTTGTTTTCAGCCTTGCGAACTATTGATACTGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTAt                                                  <  2:3498170/140‑1 (MQ=255)

                                                                                      tACTTTTTTAACAGTTCATATTTATAATTTGCTGTTTGTTTTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTAt                                                  <  2:6712131/140‑1 (MQ=255)

                                                                                              tAACATTTCATATTTATAATTTGCTGTTTGTTTTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTaa                                          <  1:920333/140‑1 (MQ=255)

                                                                                                  aTTTCATATTTATAATTTGCTGTTTGTTTTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAgtgt                                      <  1:772200/140‑1 (MQ=255)

                                                                                                   tttCATATTTATAATTTGCTGTTTGTTTTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACt                                                                                <  2:60910/97‑1 (MQ=255)

                                                                                                   tttCATATTTATAATTTGCTGTTTGTTTTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTc                                     >  2:1089672/1‑140 (MQ=255)

                                                                                                   tttCATATTTATAATTTGCTGTTTGTTTTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTc                                     >  2:11106017/1‑140 (MQ=255)

                                                                                                   tttCATATTTATAATTTGCTGTTTGTTTTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTc                                     >  1:7911080/1‑140 (MQ=255)

                                                                                                   tttCATATTTATAATTTGCTGTTTGTTTTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTc                                     >  1:3828649/1‑140 (MQ=255)

                                                                                                   tttCATATTTATAATTTGCTGTTTGTTTTCAGCCTTGCGAACTATTGATAATGAAATGNGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTc                                     >  1:6295631/1‑140 (MQ=255)

                                                                                                   cttCATATTTATAATTTGCTGTTTGTTTTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTc                                     >  2:5531456/2‑140 (MQ=255)

                                                                                                           ttATAATTTGCTGTTTGTTTTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGtaataa                             >  1:5920661/1‑140 (MQ=255)

                                                                                                           ttATAATTTGCTGTTTGTTTTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGtaataa                             >  2:628844/1‑140 (MQ=255)

                                                                                                            tataATTTGCTGTTTGTTTTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAg                            <  1:11140578/140‑1 (MQ=255)

                                                                                                            tataATTTGCTGTTTGTTTTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAg                            >  2:1391161/1‑140 (MQ=255)

                                                                                                            tataATTTGCTGTTTGTTTTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAg                            >  2:10798431/1‑140 (MQ=255)

                                                                                                            tataATTTGCTGTTTGTTTTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAg                            >  2:7105891/1‑140 (MQ=255)

                                                                                                             ataATTTGCTGTTTGTTTTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGa                           >  1:7109366/1‑140 (MQ=255)

                                                                                                              taATTTGCTGTTTGTTTTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGAc                          <  2:3900127/140‑1 (MQ=255)

                                                                                                                 tttGCTGTTTGTTTTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGACAAc                       >  1:7269862/1‑140 (MQ=255)

                                                                                                                 tttGCTGTTTGTTTTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGACAAc                       <  2:11433362/140‑1 (MQ=255)

                                                                                                                  ttGCTGTTTGTTTTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGt                                  >  2:2912974/1‑128 (MQ=255)

                                                                                                                  ttGCTGTTTGTTTTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGACAAcc                      >  2:4614494/1‑140 (MQ=255)

                                                                                                                   tGCTGTTTGTTTTCAGCCTTGCGAACTATTGATAATGAAAt                                                                                                                        <  2:7599000/41‑1 (MQ=255)

                                                                                                                   tGCTGTTTGTTTTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGACAACca                     >  1:2924881/1‑140 (MQ=255)

                                                                                                                   tGCTGTTTGTTTTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGACAACca                     >  1:11217691/1‑140 (MQ=255)

                                                                                                                   tGCTGTTTGTTTTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGACAACca                     >  1:5739357/1‑140 (MQ=255)

                                                                                                                   tGCTGTTTGTTTTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGACAACca                     >  2:4448544/1‑140 (MQ=255)

                                                                                                                    gCTGTTTGTTTTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGACAACcac                    >  2:10372220/1‑140 (MQ=255)

                                                                                                                    gCTGTTTGTTTTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGACAACcac                    >  1:2960133/1‑140 (MQ=255)

                                                                                                                    gCTGTTTGTTTTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGACAACcac                    >  1:9033954/1‑140 (MQ=255)

                                                                                                                    gCTGTTTGTTTTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGACAACcac                    >  1:1246114/1‑140 (MQ=255)

                                                                                                                     cTGTTTGTTTTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGACAACcaca                   >  2:7915426/1‑140 (MQ=255)

                                                                                                                     cTGTTTGTTTTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGACAACcaca                   >  2:4486387/1‑140 (MQ=255)

                                                                                                                     cTGTTTGTTTTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGACAACcaca                   >  1:8411446/1‑140 (MQ=255)

                                                                                                                     cTGTTTGTTTTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGACAACcaca                   >  2:9385217/1‑140 (MQ=255)

                                                                                                                     cTGTTTGTTTTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGACAACcaca                   >  2:6539700/1‑140 (MQ=255)

                                                                                                                     cTGTTTGTTTTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGACAACcaca                   >  1:10043818/1‑140 (MQ=255)

                                                                                                                       gtttgtttTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGACAACCACAAt                 >  1:1342576/1‑140 (MQ=255)

                                                                                                                        tttgtttTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGACAACCACAAtt                >  2:8662362/1‑140 (MQ=255)

                                                                                                                         ttgtttTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGACAACCACAATTg               >  1:4006886/1‑140 (MQ=255)

                                                                                                                           gtttTCAGCCTTGCGAACTATTGATAATGAAATGTGTAAg                                                                                                                 >  2:11547799/1‑40 (MQ=255)

                                                                                                                                cAGCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGACAACCACAATTGCAGACAt        <  1:4818896/140‑1 (MQ=255)

                                                                                                                                  gCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGACAACCACAATTGCAGACATGa      >  1:5203729/1‑140 (MQ=255)

                                                                                                                                  gCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGACAACCACAATTGCAGACATGa      >  2:3684533/1‑140 (MQ=255)

                                                                                                                                  gCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGACAACCACAATTGCAGACATGa      >  2:31390/1‑140 (MQ=255)

                                                                                                                                  gCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGACAACCACAATTGCAGACATGa      >  2:2224661/1‑140 (MQ=255)

                                                                                                                                  gCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGACAACCACAATTGCAGACATGa      >  2:1975215/1‑140 (MQ=255)

                                                                                                                                  gCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGACAACCACAATTGCAGACATGa      >  2:11233721/1‑140 (MQ=255)

                                                                                                                                  gCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGACAACCACAATTGCAGACATGa      >  1:4107549/1‑140 (MQ=255)

                                                                                                                                  gCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGACAACCACAATTGCAGACATGa      >  2:10518473/1‑140 (MQ=255)

                                                                                                                                  gCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGACAACCACAATTGCAGACATGa      <  2:5713648/140‑1 (MQ=255)

                                                                                                                                  gCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGACAACCACAATTGCAGACATGa      >  1:206758/1‑140 (MQ=255)

                                                                                                                                  gCCTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAAGTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGACAACCCCAATAGCAGACATGa      >  2:1683325/1‑140 (MQ=255)

                                                                                                                                   ccTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGACAACCACAATTGCAGACATGAt     <  1:3203279/140‑1 (MQ=255)

                                                                                                                                   ccTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGACAACCACAATTGCAGACATGAt     <  1:6666223/140‑1 (MQ=255)

                                                                                                                                   ccTTGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGACAACCACAATTGCAGACATGAt     <  1:5517982/140‑1 (MQ=255)

                                                                                                                                      tGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTACTAAGACAACCCCAATTGCAGACATTAtttg  >  2:6432022/1‑139 (MQ=255)

                                                                                                                                      tGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGACAACCACAATTGCAGACATGa      <  1:4277773/136‑1 (MQ=255)

                                                                                                                                      tGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGACAACCACAATTGCAGACATGATTTc  >  2:10736485/1‑140 (MQ=255)

                                                                                                                                      tGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGACAACCACAATTGCAGACATGATTTc  >  2:6013173/1‑140 (MQ=255)

                                                                                                                                      tGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGACAACCACAATTGCAGACATGATTTc  >  2:5463892/1‑140 (MQ=255)

                                                                                                                                      tGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGACAACCACAATTGCAGACATGATTTc  >  2:4983138/1‑140 (MQ=255)

                                                                                                                                      tGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGACAACCACAATTGCAGACATGATTTc  >  2:4265950/1‑140 (MQ=255)

                                                                                                                                      tGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGACAACCACAATTGCAGACATGATTTc  >  2:3225280/1‑140 (MQ=255)

                                                                                                                                      tGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGACAACCACAATTGCAGACATGATTTc  >  2:2665787/1‑140 (MQ=255)

                                                                                                                                      tGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGACAACCACAATTGCAGACATGATTTc  >  1:5389626/1‑140 (MQ=255)

                                                                                                                                      tGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGACAACCACAATTGCAGACATGATTTc  >  1:5056336/1‑140 (MQ=255)

                                                                                                                                      tGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGACAACCACAATTGCAGACATGATTTc  >  1:4429709/1‑140 (MQ=255)

                                                                                                                                      tGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGACAACCACAATTGCAGACATGATTTc  >  1:1076813/1‑140 (MQ=255)

                                                                                                                                      tGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGACAACCACAATTGCAGACATGATTTc  >  1:10239084/1‑140 (MQ=255)

                                                                                                                                      tGCGAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCAGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGACAACCACAATTGCAGACATGATTTc  >  2:8738742/1‑140 (MQ=255)

ATGTTAGCGTTGAAGGCATGATGAATAAATATAACAGAACAAACGAGCGACATTTTATCTCCTTAAAACAATAAAGTTTTTATCGATACTTTTTTAACATTTCATATTTATAATTTGCTGTTTGTTTTCAGCCTTGCAAACTATTGATAATGAAATGTGTAAGATCTCTTGCAATGCGACCCATTTCTGAAATACTCAGCTGATCAATTGCCGAAAAAATGGCTATCAACGTAAGTGTCAGTAATAAGACAACCACAATTGCAGACATGATTTC  >  NZ_CP025268/1588454‑1588727

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`