| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 2,167,134 | A→G | N74D (AAT→GAT) | baeS → | two‑component system sensor histidine kinase BaeS |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 2,167,134 | 0 | A | G | 99.5% | 3645.9 / NA | 1046 | N74D (AAT→GAT) | baeS | two‑component system sensor histidine kinase BaeS |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (674/367); minor base T (4/1); total (678/368) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.62e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 1119 total aligned reads displayed.
ACTGGGCGGTGCGTATCAGTTTTGAGCGTGGCTTTATTGATTACATCAAGCATGGTAATGAACAGCGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACAATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGATAATTCGGAAGATAAACCCGGCCCGGGTATGCCACCGCACGGCTGGCGTACCCAGTTCTGGGTGGTTGATCAAAACAACAAAGTGCTGGTTGG > NZ_CP025268/2166997‑2167270 | cTGGGCGGTGCGTATCAGTTTTGAGCGTGGCTTTATTGATTACATCAAGCATGGTAATGAACAGCGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATg < 2:10964070/140‑1 (MQ=255) gtgCGGTGCGTATCAGTTTTGAGCGTGGCTTTATAGATTACAACAAGCATGGTAATGAACAGCGAATACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACgatgat > 1:44099/3‑140 (MQ=255) gggCGGTGCGTATCAGTTTTGAGCGTGGCTTTATTGATTACATCAAGCATGGTAATGAACAGCGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACgatgat > 2:9495745/1‑140 (MQ=255) gggCGGTGCGTATCAGTTTTGAGCGTGGCTTTATTGATTACATCAAGCATGGTAATGAACAGCGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACgatgat > 1:5336275/1‑140 (MQ=255) gggCGGTGCGTATCAGTTTTGAGCGTGGCTTTATTGATTACATCAAGCATGGTAATGAACAGCGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACgatgat > 1:6377940/1‑140 (MQ=255) gggCGGTGCGTATCAGTTTTGAGCGTGGCTTTATTGATTACATCAAGCATGGTAATGAACAGCGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACgatgat > 1:7809182/1‑140 (MQ=255) gggCGGTGCGTATCAGTTTTGAGCGTGGCTTTATTGATTACATCAAGCATGGTAATGAACAGCGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACgatgat > 1:3570767/1‑140 (MQ=255) gggCGGTGCGTATCAGTTTTGAGCGTGGCTTTATTGATTACATCAAGCATGGTAATGAACAGCGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACgatgat > 1:9855843/1‑140 (MQ=255) gggCGGTGCGTATCAGTTTTGAGCGTGGCTTTATTGATTACATCAAGCATGGTAATGAACAGCGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACgatgat > 2:10095108/1‑140 (MQ=255) gggCGGTGCGTATCAGTTTTGAGCGTGGCTTTATTGATTACATCAAGCATGGTAATGAACAGCGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACgatgat > 2:10752807/1‑140 (MQ=255) gggCGGTGCGTATCAGTTTTGAGCGTGGCTTTATTGATTACATCAAGCATGGTAATGAACAGCGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATg > 1:659161/1‑138 (MQ=255) gggCGGTGCGTATCAGTTTTGAGCGTGGCTTTATTGATTACATCAAGCATGGTAATGAACAGCGATTACAACTGTTAAGTGATGCGCTAGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACgatgat > 2:1551750/1‑140 (MQ=255) ggCGGTGCGTATCAGTTTTGAGCGTGGCTTTATTGATTACATCCAGCATGGTAATGAACAGCGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCACCTGGCGCTTCCTGCGCAACGATGATc > 2:5489768/1‑140 (MQ=255) ggCGGTGCGTATCAGTTTTGAGCGTGGCTTTATTGATTACATCAAGCATGGTAATGAACAGCGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATc > 1:4591728/1‑140 (MQ=255) ggCGGTGCGTATCAGTTTTGAGCGTGGCTTTATTGATTACATCAAGCATGGTAATGAACAGCGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATc > 1:4025603/1‑140 (MQ=255) ggCGGTGCGTATCAGTTTTGAGCGTGGCTTTATTGATTACATCAAGCATGGTAATGAACAGCGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATc > 2:6461938/1‑140 (MQ=255) ggCGGTGCGTATCAGTTTTGAGCGTGGCTTTATTGATTACATCAAGCATGGTAATGAACAGCGATTACAACTGGTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATc > 2:11409445/1‑140 (MQ=255) gCGGTGCGTATCAGTTTTGAGCGTGGCTTTATTGATTACATCAAGCATGGTAATGAACAGCGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCg > 1:1806706/1‑140 (MQ=255) gCGGTGCGTATCAGTTTTGAGCGTGGCTTTATTGATTACATCAAGCATGGTAATGAACAGCGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCg > 1:10710159/1‑140 (MQ=255) gCGGTGCGTATCAGTTTTGAGCGTGGCTTTATTGATTACATCAAGCATGGTAATGAACAGCGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCg > 2:8717113/1‑140 (MQ=255) gCGGTGCGTATCAGTTTTGAGCGTGGCTTTATTGATTACATCAAGCATGGTAATGAACAGCGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCg > 1:3284554/1‑140 (MQ=255) gCGGTGCGTATCAGTTTTGAGCGTGGCTTTATTGATTACATCAAGCATGGTAATGAACAGCGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCg > 2:2555159/1‑140 (MQ=255) ggTGCGTATCAGTTTTGAGCGTGGCTTTATTGATTACATCAAGCATGGTAATGAACAGCGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCGCt > 1:11071514/1‑140 (MQ=255) ggTGCGTATCAGTTTTGAGCGTGGCTTTATTGATTACATCAAGCATGGTAATGAACAGCGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCGCt < 1:2406938/140‑1 (MQ=255) tGCGTATCAGTTTTGAGCGTGGCTTTATTGATTACATCAAGCATGGTAATGAACAGCGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCGCttt > 1:9644656/1‑140 (MQ=255) tGCGTATCAGTTTTGAGCGTGGCTTTATTGATTACATCAAGCATGGTAATGAACAGCGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCGCttt < 1:6800283/140‑1 (MQ=255) tGCGTATCAGTTTTGAGCGTGGCTTTATTGATTACATCAAGCATGGTAATGAACAGCGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCGCttt < 1:2256321/140‑1 (MQ=255) cGTATCAGTTTTGAGCGTGGCTTTATTGATTACATCAAGCATGGTAATGAACAGCGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGt < 2:1405859/140‑1 (MQ=255) tATCAGTTTTGAGCGTGGCTTTATTGATTACATCAAGCATGGTAATGAACAGCGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCt < 2:3730625/140‑1 (MQ=255) aTCAGTTTTGAGCGTGGCTTTATTGATTACATCAAGCATGGTAATGAACAGCGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCtt > 2:4896019/1‑140 (MQ=255) aTCAGTTTTGAGCGTGGCTTTATTGATTACATCAAGCATGGTAATGAACAGCGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCtt > 2:9672985/1‑140 (MQ=255) ttttGAGCGTGGCTTTATTGATTACATCAAGCATGGTAATGAACAGCGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGa > 1:708398/1‑140 (MQ=255) ttGAGCGTGGCTTTATTGATTACATCAAGCATGGTAATGAACAGCGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATc < 2:5803439/140‑1 (MQ=255) ttGAGCGTGGCTTGATTGATTACATCAAGCATGGTCATGAACAGCGATTACAACTGTGAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTGCCTGCGCAACGATGATCGCTTTGTATTTCAGATc > 2:7237449/1‑140 (MQ=255) gAGCGTGGCTTTATTGATTACATCAAGCATGGTAATGAACAGCGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCt > 2:4684667/1‑140 (MQ=255) aGCGTGGCTTTATTGATTACATCAAGCATGGTAATGAACAGCGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCCTGGCAACTGGCGCTGCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTg > 2:2330458/1‑140 (MQ=255) ttGATTACATCAAGCATGGTAATGAACAGCGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGaa < 1:2092079/140‑1 (MQ=255) ttGATTACATCAAGCATGGTAATGAACAGCGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGaa < 1:2946314/140‑1 (MQ=255) ttGATTACATCAAGCATGGTAATGAACAGCGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGaa < 2:8355720/140‑1 (MQ=255) aTCAAGCATGGTAATGAACAGCGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGATaa > 1:5155250/1‑140 (MQ=255) aGCATGGTAATGAACAGCGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGATAATTCg < 1:10379132/140‑1 (MQ=255) aGCATGGTAATGAACAGCGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGATAATTCg < 1:3054799/140‑1 (MQ=255) gCATGGTAATGAACAGCGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGATAATTCgg > 2:3536754/1‑140 (MQ=255) gTAATGAACAGCGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGATAATTCGGAAGAt > 2:10014725/1‑140 (MQ=255) tGAACAGCGATTACAACTGTTAAGTGATGCGCTGGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCAGTTGCACACGATCAGTCGGCAGGTaagc > 2:2951864/1‑138 (MQ=255) aaCAGCGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGATAATTCGGAAGATAAAccc > 1:4889329/1‑140 (MQ=255) aGCGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGATAATTCGGAAGATAAAcccggc < 1:47837/140‑1 (MQ=255) aGCGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGATAATTCGGAAGATAAAcccggc > 1:8065746/1‑140 (MQ=255) aGCGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGATAATTCGGAAGATAAAcccggc > 1:9441367/1‑140 (MQ=255) aGCGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGATAATTCGGAAGATAAAcccggc < 1:11531197/140‑1 (MQ=255) cGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGATAATTCGGAAGATAAAcccggccc > 1:7231802/1‑140 (MQ=255) cGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGATAATTCGGAAGATAAAcccggccc > 1:10054583/1‑140 (MQ=255) cGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGATAATTCGGAAGATAAAcccggccc > 2:3833708/1‑140 (MQ=255) cGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGATAATTCGGAAGATAAAcccggccc > 1:8488011/1‑140 (MQ=255) cGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGATAATTCGGAAGATAAAcccggccc > 2:7935982/1‑140 (MQ=255) cGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGATAATTCGGAAGATAAAcccggccc > 2:8139303/1‑140 (MQ=255) cGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGATAATTCGGAAGATAAAcccggccc > 1:7442279/1‑140 (MQ=255) cGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGATAATTCGGAAGATAAAcccggcac > 2:5067117/1‑138 (MQ=255) cGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTCGTCTTTCAGATCCTGCGTTCATTTGAACACGATAATTCGGAAGATAAAcccggccc > 1:5603289/1‑140 (MQ=255) aCTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGATAATTCGGAAGATAAACCCGGCCCGGGTATGc < 2:1940857/140‑1 (MQ=255) gTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGATAATTCGGAAGATAAACCCGGCCCGGGTATGCCAc > 2:4480632/1‑140 (MQ=255) gTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGATAATTCGGAAGATAAACCCGGCCCGGGTATGCCAc > 1:4253810/1‑140 (MQ=255) ttAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGATAATTCGGAAGATAAACCCGGCCCGGGTATGCCAcc > 1:925202/1‑140 (MQ=255) ttAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTGTCAGATCCTGCGTTCATTTGAACACGATAATTCGGAAGATAAACCCGGCCCGGGTATGCCAcc > 2:6947697/1‑140 (MQ=255) gTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGATAATTCGGAAGATAAACCCGGCCCGGGTATGCCACCGCAc < 1:11321759/140‑1 (MQ=255) gATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGATAATTCGGAAGATAAACCCGGCCCGGGTATGCCACCGCACgg < 2:7837785/140‑1 (MQ=255) gATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCGTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGATAATTCGGAAGATAAACCCGGCCCGGGTATGCCACCGCACgg < 2:9044301/140‑1 (MQ=255) gATGCGCTCGGCGAGCAGTCTGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCAATTGAACACGATAATTCGGAAGATAAACCCGGCCCGGGTATGCCACCGCACgg < 1:1218868/140‑1 (MQ=255) tGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGATAATTCGGAAGATAAACCCGGCCCGGGTATGCCACCGCACGGCt > 1:8944012/1‑140 (MQ=255) tGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGATAATTCGGAAGATAAACCCGGCCCGGGTATGCCACCGCACGGCt > 2:417852/1‑140 (MQ=255) tGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTGCATTTGACCACGATAATTCGGAAGATAAACACGGCCCGGGTATGCCACCGCACGGCt > 2:7352404/1‑140 (MQ=255) cgcTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGATACTTCGGAAGATAAACCCGGCCCGGGTATGCCACCGCACGGCTgg > 2:9231797/1‑140 (MQ=255) gcTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGATAATTCGGAAGATAAACCCGGCCCGGGTATGCCACCGCACGGCTGGc < 1:1589243/140‑1 (MQ=255) gcTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGATAATTCGGAAGATAAACCCGGCCCGGGTATGCCACCGCACGGCTGGc < 2:31225/140‑1 (MQ=255) gcTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGATAATTCGGAAGATAAACCCGGCCCGGGTATGCCACCGCACGGCTGGc < 1:1438729/140‑1 (MQ=255) gcTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCGTCCTGCGCACCGAGGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACTCGATACTTCGGAAGATAAACCCGGCCCGGGTATGCCACCGCACGGCTGGc < 2:7726128/140‑1 (MQ=255) ggCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGATAATTCGGAAGATAAACCCGGCCCGGGTATGCCACCGCACGGCTGGCGTAc > 1:11156899/1‑140 (MQ=255) gCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGATAATTCGGAAGATAAACCCGGCCCGGGTATGCCACCGCACGGCTGGCGTAcc < 1:6136582/140‑1 (MQ=255) cAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGATAATTCGGAAGATAAACCCGGCCCGGGTATGCCACCGCACGGCTGGCGTACCCAGtt > 2:10427204/1‑140 (MQ=255) gcaTGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGATAATTCGGAAGATAAACCCGGCCCGGGTATGCCACCGCACGGCTGGCGTACCCAGTTCTGGGTGGTTg < 1:10871976/140‑1 (MQ=255) gcaTGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGATAATTCGGAAGATAAACCCGGCCCGGGTATGCCACCGCACGGCTGGCGTACCCAGTTCTGGGTGGTTg > 1:8670709/1‑140 (MQ=255) gcaTGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGATAATTCGGAAGATAAACCCGGCCCGGGTATGCCACCGCACGGCTGGCGTACCCAGTTCTGGGTGGTTg < 2:6112364/140‑1 (MQ=255) gcaTGGCAACTGGCGCTTCCTGCGCAACGATGATCGCGTGGTCTTGCAGTTCCTGCGTGCATTGGCCCACGATTATTCGGAAGAGCAACCCGGCCCGGGGATGCCACCGCTCGGCTGGGGTACCCAGTGCTGGGTGGTTg > 2:2201440/1‑140 (MQ=255) caTGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGATAATTCGGAAGATAAACCCGGCCCGGGTATGCCACCGCACGGCTGGCGTACCCAGTTCTGGGTGGTTGa > 2:2732589/1‑140 (MQ=255) aTGGCAACTGGCGCTTCCTGCGCAACTATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGATAATTCGGAAGATAAACCCGGCCCGGGTATGCCACCGCACGGCTGGCGTACCCAGTTCTGGGTGGTTGAt > 1:3223797/1‑140 (MQ=255) aTGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGATACTTCGGAAGAGAAACCCGGCCCGGGTATGCCACCGCACGGCTGGCGTACCCAGTTCTGGGTGGTTGAt < 2:5252492/140‑1 (MQ=255) aTGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGATAATTCGGACGATAAACCCGGCCCGGGTATGCCACCGCACGGCTGGCGTACCCAGTTCTGGGTGGTTGAt > 2:11198386/1‑140 (MQ=255) aTGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGATAATTCGGAAGATAAACCCGGCCCGGGTATGCCACCGCACGGCTGGCGTACCCAGTTCTGGGTGGTTGAt > 2:5683017/1‑140 (MQ=255) aTGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGATAATTCGGAAGATAAACCCGGCCCGGGTATGCCACCGCACGGCTGGCGTACCCAGTTCTGGGTGGTTGAt > 2:1274069/1‑140 (MQ=255) aTGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGATAATTCGGAAGATAAACCCGGCCCGGGTATGCCACCGCACGGCTGGCGTACCCAGTTCTGGGTGGTTGAt > 1:5856532/1‑140 (MQ=255) aTGGCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGATAATGCGGAAGATAAACCCGGCCCGGGTATGCCACCGCACGGCTGGCGTACCCAGTGCTGGGTGGTTGAt > 1:250663/1‑140 (MQ=255) ggCTACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGATAATTCGGAAGATAAACCCGGCCCGGGTATGCCACCGCACGGCTGGCGTACCCAGTTCTGGGTGGTTGATCa > 1:5034537/1‑140 (MQ=255) ggCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGATAATTCGGAAGATAAACCCGGCCCGGGTATGCCACCGCACGGCTGGCGTACCCAGTTCTGGGTGGTTGATCa > 2:672590/1‑140 (MQ=255) ggCAACTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGATAATTCGGAAGATAAACCCGGCCCGGGTATGCCACCGCACGGCTGGCGTACCCAGTTCTGGGTGGTTGATCa > 2:3335051/1‑140 (MQ=255) aaCTGGCGCTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGATAATTCGGAAGATAAACCCGGCCCGGGTATGCCACCGCACGGCTGGCGTACCCAGTTCTGGGTGGTTGATCaaaa < 2:6232528/140‑1 (MQ=255) ggCGCTTCCTGCGCAACGATGATCGCTTGGTCTTTCAGATCCTGCGTTCATTTGAACACGATAATGCGGAAGATAAACCCGGACCGGGTATGCCACAGCACGGCTGGCGTACCCAGTTCTGGGTGGTTGAGCCAgacaac > 2:1692926/1‑140 (MQ=255) gcgcTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGATAATTCGGAAGATAAACCCGGCCCGGGTATGCCACCGCACGGCTGGCGTACCCAGTTCTGGGTGGTTGATCAAAacaaca < 1:2729936/140‑1 (MQ=255) cgcTTCCTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACTATAATTAGGAAGATAAACCCGTCACGTGTAAGCCACCGCACGGCTGGCGTACCCACTTCTGGGTGGTTGATCAAAAcaacaa > 1:8259786/1‑140 (MQ=255) cTGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGATAATTCGGAAGATAAACCCGGCCCGGGTATGCCACCGCACGGCTGGCGTACCCAGTTCTGGGTGGTTGATCAAAACAACAAAGTGCt > 1:388378/1‑140 (MQ=255) tGCGCAACGATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGATAATTCGGAAGATAAACCCGGCCCGGGTATGCCACCGCACGGCTGGCGTACCCAGTTCTGGGTGGTTGATCAAAACAACAAAGTGCtg < 2:3962336/140‑1 (MQ=255) | ACTGGGCGGTGCGTATCAGTTTTGAGCGTGGCTTTATTGATTACATCAAGCATGGTAATGAACAGCGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACAATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGATAATTCGGAAGATAAACCCGGCCCGGGTATGCCACCGCACGGCTGGCGTACCCAGTTCTGGGTGGTTGATCAAAACAACAAAGTGCTGGTTGG > NZ_CP025268/2166997‑2167270 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |