| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 2,237,632 | A→G | *240* (TAA→TAG) | sanA → | outer membrane permeability protein SanA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 2,237,632 | 0 | A | G | 99.6% | 1587.2 / NA | 457 | *240* (TAA→TAG) | sanA | outer membrane permeability protein SanA |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (194/260); minor base T (0/2); total (194/263) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.10e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 459 total aligned reads displayed.
TTTTTAAACGTGAACCGCGTTTTTTAGGGCCGCTGGTCCCTATTCCGGCTATGCACCAGGTACCGGAAGATGCGCAGGGGTATCCCGCCGTCACACCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAATTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCCGCGAAGCATGGAAAGGCTGGCGCGCAGGCGCGATTGATAAACGGGTTAAAAATGCACCGGAACCGGTGTATG > NZ_CP025268/2237496‑2237767 | tttttAAACGTGAACCGCGTTTTTTAGGGCCGCTGGTCCCTATTCCGGCTATGCACCAGGTACCGGAAGATGCGCAGGGGTATCCCGCCGTCACACCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTa < 1:8780825/140‑1 (MQ=255) ttttAAACGTGAACCGCGTTTTTTAGGGCCGCTGGTCCCTATTCCGGCTATGCACCAGGTACCGGAAGATGCGCAGGGGTATCCCGCCGTCACACCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTAt < 1:9645181/140‑1 (MQ=255) ttAAACGTGAACCGCGTTTTTTAGGGCCGCTGGTCCCTATTCCGGCTATGCACCAGGTACCGGAAGATGCGCAGGGGTATCCCGCCGTCACACCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATgg > 2:11446083/1‑140 (MQ=255) ttAAACGTGAACCGCGTTTTTTAGGGCCGCTGGTCCCTATTCCGGCTATGCACCAGGTACCGGAAGATGCGCAGGGGTATCCCGCCGTCACACCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATgg < 2:11271013/140‑1 (MQ=255) aaCGTGAACCGCGTTTTTTAGGGCCGCTGGTCCCTATTCCGGCTATGCACCAGGTACCGGAAGATGCGCAGGGGTATCCCGCCGTCACACCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATg < 1:6791403/140‑1 (MQ=255) aaCCGCGTTTTTTAGGGCCGCTGGTCCCTATTCCGGCTATGCACCAGGTACCGGAAGATGCGCAGGGGTATCCCGCCGTCACACCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTAcagc > 1:700837/1‑140 (MQ=255) aaCCGCGTTTTTTAGGGCCGCTGGTCCCTATTCCGGCTATGCACCAGGTACCGGAAGATGCGCAGGGGTATCCCGCCGTCACACCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTAcagc > 1:7698288/1‑140 (MQ=255) tAGGGCCGCTGGTCCCTATTCCGGCTATGCACCAGGTACCGGAAGATGCGCAGGGGTATCCCGCCGTCACACCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCg < 1:2958005/140‑1 (MQ=255) gCCGCTGGTCCCTATTCCGGCTATGCACCAGGTACCGGAAGATGCGCAGGGGTATCCCGCCGTCACACCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGc < 1:10022634/140‑1 (MQ=255) cGCTGGTCCCTATTCCGGCTATGCACCAGGTACCGGAAGATGCGCAGGGGTATCCCGCCGTCACACCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCg > 2:7249116/1‑140 (MQ=255) cTGGTCCCTATTCCGGCTATGCACCAGGTACCGGAAGATGCGCAGGGGTATCCCGCCGTCACACCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCTGTTTTTTGTCGTTGCAG‑tt > 2:6703571/1‑140 (MQ=255) cTGGTCCCTATTCCGGCTATGCACCAGGTACCGGAAGATGCGCAGGGGTATCCCGCCGTCACACCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑tt > 1:7956943/1‑140 (MQ=255) ggTCCCTATTCCGGCTATGCACCAGGTACCGGAAGATGCGCAGGGGTATCCCGCCGTCACACCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑tttt < 1:11277304/140‑1 (MQ=255) ttCCGGCTATGCACCAGGTACCGGAAGATGCGCAGGGGTATCCCGCCGTCACACCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTa > 1:11450378/1‑140 (MQ=255) ccGGCTATGCACCAGGTACCGGAAGATGCGCAGGGGTATCCCGCCGTCACACCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATc < 1:577499/140‑1 (MQ=255) ccGGCTATGCACCAGGTACCGGAAGATGCGCAGGGGTATCCCGCCGTCACACCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATc < 2:10039568/140‑1 (MQ=255) ccGGCTATGCACCAGGTACCGGAAGATGCGCAGGGGTATCCCGCCGTCACACCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATc < 1:10864585/140‑1 (MQ=255) cGGCTATGCACCACGTACCGGAAGATGCGCAGGGGTATCCCGCCGACACACCCGAACAGTTACTTGAATGCCCCACGAAACAAGGAAAGTAGTGATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATcc < 2:6069707/140‑1 (MQ=255) gCTATGCACCAGGTACCGGAAGATGCGCAGGGGTATCCCGCCGTCACACCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCg > 2:10239953/1‑140 (MQ=255) gCTATGCACCAGGTACCGGAAGATGCGCAGGGGTATCCCGCCGTCACACCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCg > 2:3810532/1‑140 (MQ=255) cTATGCACCAGGTACCGGAAGATGCGCAGGGGTATCCCGCCGTCACACCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGa < 1:321754/140‑1 (MQ=255) aTGCACCAGGTACCGGAAGATGCGCAGGGGTATCCCGCCGTCACACCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGata > 1:1357151/1‑140 (MQ=255) aGGTACCGGAAGATGCGCAGGGGTATCCCGCCGTCACACCCGAACAGTTACTTGAATTACAAAAGAAACAAGGACAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGtt > 2:8357432/1‑140 (MQ=255) ggTACCGGAAGATGCGCAGGGGTATCCCGCCGTCACACCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGttt > 2:10653350/1‑140 (MQ=255) ggTACCGGAAGATGCGCAGGGGTATCCCGCCGTCACACCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGttt > 1:4304985/1‑140 (MQ=255) ggTACCGGAAGATGCGCAGGGGTATCCCGCCGTCACACCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGttt > 1:7364897/1‑140 (MQ=255) ggTACCGGAAGATGCGCAGGGGTATCCCGCCGTCACACCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTGTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGttt > 2:9842908/1‑140 (MQ=255) aCCGGAAGATGCGCAGGGGTATCCCGCCGTCACACCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCcg < 2:10385724/140‑1 (MQ=255) aCCGGAAGATGCGCAGGGGTATCCCGCCGTCACACCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCcg < 1:5545853/140‑1 (MQ=255) aCCGGAAGATGCGCAGGGGTATCCCGCCGTCACACCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCcg > 2:197180/1‑140 (MQ=255) aCCGGAAGATGCGCAGGGGTATCCCGCCGTCACACCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCcg < 2:3950010/140‑1 (MQ=255) aCCGGAAGATGCGCAGGGGTATCCCGCCGTCACACCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCcg > 1:4966963/1‑140 (MQ=255) cGGAAGTTGCGCAGGGGTATCCCGCCGTCACACCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGAGGTACCGCAGTATTTTGTCGTGGCCG‑TTTTTGGCCGGATCCCGACATTTTGGTTCcgcg < 2:6201760/140‑1 (MQ=255) cGGAAGATGCGCAGGGGTATCCCGCCGTCACACCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCcgcg > 1:4032207/1‑140 (MQ=255) cGGAAGATGCGCAGGGGTATCCCGCCGTCACACCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCcgcg > 2:1605431/1‑140 (MQ=255) cGGAAGATGCGCAGGGGTATCCCGCCGTCACACCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCcgcg > 2:5328716/1‑140 (MQ=255) cGGAAGATGCGCAGGGGTATCCCGCCGTCACACCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCcgcg < 2:5519577/140‑1 (MQ=255) cGGAAGATGCGCAGGGGTATCCCGCCGTCACACCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCcgcg < 1:11163880/140‑1 (MQ=255) cGGAAGATGCGCAGGGGTATCCCGCCGTCACACCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCcgcg < 1:6185473/140‑1 (MQ=255) cGGAAGATGCGCAGGGGGATCCCGCCGTCACACCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑ATTTTTTCCTTATCCCGATATTTTGTTTCcgcg < 1:8320676/140‑1 (MQ=255) cGGAAGATGCGCACGGGTATCCCGCCGTCACACCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCcgcg < 2:11595985/140‑1 (MQ=255) ggAAGATGCGCAGGGGTATCCCGCCGTCACACCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCCGCGa < 2:11023787/140‑1 (MQ=255) gAAGATGCGCAGGGGTATCCCGCCGTCACACCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCCGCGaa < 1:4847818/140‑1 (MQ=255) aaGATGCGCAGGGGTATCCCGCCGTCACACCCGAACAGTTACTTGACTTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCCGCGAAg < 1:8591674/140‑1 (MQ=255) aaGATGCGCAGGGGTATCCCGCCGTCACACCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCCGCGAAg < 1:72017/140‑1 (MQ=255) aaGATGCGCAGGGGTATCCCGCCGTCACACCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCCGCGAAg < 1:5024893/140‑1 (MQ=255) aaGATGCGCAGGGGTATCCCGCCGTCACACCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCCGCGAAg < 1:2024969/140‑1 (MQ=255) aTGCGCAGGGGTATCCCGCCGTCACACCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCCGCGAAGCAt < 2:4382243/140‑1 (MQ=255) aTGCGCAGGGGTATCCCGCCGTCACACCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTACGCGAAGCAt > 2:6378674/1‑140 (MQ=255) cgcAGGGGTATCCCGCCGTCACACCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCCGCGAAGTATGGa > 2:7806955/1‑140 (MQ=255) gTATCCCGCCGTCACACCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCCGCGAAGCATGGAAAGGCTg < 1:10212357/140‑1 (MQ=255) tCCCGCCGTCACACCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCCGCGAAGCATGGAAAGGCTGgcg > 2:9573094/1‑140 (MQ=255) tCCCGCCGTCACACCCGAACAGTTACTGGAATTACAAAAGAAACAAGGACAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCCGCGAAGCATGGAAAGGCTGgcg > 2:5191027/1‑140 (MQ=255) ccgTCACACCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCcgcg < 2:2526259/116‑1 (MQ=255) ccgTCACACCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCCGCGAAGCATGGAAAGGCTGGCGCGCAg > 1:2618342/1‑140 (MQ=255) ccgTCACACCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCCGCGAAGCATGGAAAGGCTGGCGCGCAg > 1:8979600/1‑140 (MQ=255) ccgTCACACCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCCGCGAAGCATGGAAAGGCTGGCGCGCAg > 1:3464178/1‑140 (MQ=255) cgTCACACCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCCGCGAAGCATGGAAAGGCTGGCGCGCAgg < 1:308254/140‑1 (MQ=255) cgTCACACCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCCGCGAAGCATGGAAAGGCTGGCGCGCAgg < 2:8800132/140‑1 (MQ=255) gTCACACCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCCGCGAAGCATGGAAAGGCTGGCGCGCAGgc > 2:4942544/1‑140 (MQ=255) tCACACCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCCGCGAAGCATGGAAAGGCTGGCGCGCAGgcg < 1:806696/140‑1 (MQ=255) tCACACCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCCGCGAAGCATGGAAAGGCTGGCGCGCAGgcg < 1:11067098/140‑1 (MQ=255) cacaCCCGAACAGTTACTTGAATTACNAAAGAAANAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCCGCGAAGCATGNAAAGGCTGGCGCGCAGgcgc < 1:6243369/140‑1 (MQ=255) cacaCCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCCGCGAAGCATGGAAAGGCTGGCGCGCAGgcgc < 1:5355509/140‑1 (MQ=255) cacaCCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCCGCGAAGCATGGAAAGGCTGGCGCGCAGgcgc < 2:9373447/140‑1 (MQ=255) acacCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCCGCGAAGCATGGAAAGGCTGGCGCGCAGGcgcg < 2:9721993/140‑1 (MQ=255) cacCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCCGCGAAGCATGGAAAGGCTGGCGCGCAGGCGCGa > 1:10445488/1‑140 (MQ=255) aCAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCCGCGAAGCATGGAAAGGCTGGCGCGCAGGCGCGATTGATaa > 2:889251/1‑140 (MQ=255) cAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCCGCGAAGCATGGAAAGGCTGGCGCGCAGGCGCGATTGATaaa < 1:6525059/140‑1 (MQ=255) cAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCCGCGAAGCATGGAAAGGCTGGCGCGCAGGCGCGATTGATaaa < 2:2591543/140‑1 (MQ=255) cAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCCGCGAAGCATGGAAAGGCTGGCGCGCAGGCGCGATTGATaaa < 2:1897314/140‑1 (MQ=255) cAGTTACTTGAATTACAAAAGAAACAAGGAAAGTACTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCCGCGAAGCATGGAAAGGCTGGCGCGCAGGCGCGATTGATaaa < 2:4801722/140‑1 (MQ=255) aGTTACTTGCAGTACAACAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCCGCGAAGCATGGAAAGGCTGGCGCGCAGGCGCGATTGATAAAc < 2:5603675/140‑1 (MQ=255) aGTTACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCCGCGAAGCATGGAAAGGCTGGCGCGCAGGCGCGATTGATAAAc < 1:3807053/140‑1 (MQ=255) ttACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCCGCGAAGCATGGAAAGGCTGGCGCGCAGGCGCGATTGATAAACgg > 1:4560452/1‑140 (MQ=255) ttACTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCCGCGAAGCATGGAAAGGCTGGCGCGCAGGCGCGATTGATAAACgg > 1:2506332/1‑140 (MQ=255) aCTTGAATTACAAACGTAACAAGGAAAGTAGATATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTATTTTCCTTATCCCGATATTTTGTTTCCGCGAAGCATGGAAAGGCTGGCGCGCAGGCGCGAATGATAAACGCGt < 2:7049591/140‑1 (MQ=255) aCTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTTCAGCCGTTTTTTGTCGTAGCCG‑TTTTTTTACTTATACCGATCTTTTGTTTCCGCGATGCATGGAAAGGCTGGCGCGCTGGGGCGATAGCTaatggggg > 2:5863577/1‑134 (MQ=255) aCTTGAATTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCCGCGAAGCATGGAAAGGCTGGCGCGCAGGCGCGATTGATAAACGGGt < 1:2342880/140‑1 (MQ=255) aTTACAAAAGAAACAAGGAAATTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCCGCGAAGCATGGAAAGGCTGGCGCGCAGGCGCGATTGATAAACGGGTTaaaaa < 2:6782515/140‑1 (MQ=255) aTTACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCCGCGAAGCATGGAAAGGCTGGCGCGCAGGCGCGATTGATAAACGGGTTaaaaa < 1:9709262/140‑1 (MQ=255) ttACAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCCGCGAAGCATGGAAAGGCTGGCGCGCAGGCGCGATTGATAAACGGGTTAAAAAt < 2:1461098/140‑1 (MQ=255) actaaaGAAACATGGAAAGTAGTTTTTGATGTACAGCATTTTTTTGTCGTTGCAG‑TTTTTTTCATTAGCCCGATATTTTGTTTCCGCGAAGCATGGAAAGGCTGGCGCGCAGGCGCGATTGATAAACTGGTTTAAAATGc < 2:2192993/137‑1 (MQ=255) aCAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCCGCGAAGCATGGAAAGGCTGGCGCGCAGGCGCGATTGATAAACGGGTTAAAAATGc < 1:1699510/140‑1 (MQ=255) aCAAAAGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCCGCGAAGCATGGAAAGGCTGGCGCGCAGGCGCGATTGATAAACGGGTTAAAAATGc < 1:7544781/140‑1 (MQ=255) aaaaGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCCGCGAGGCATGGAAAGGCTGGCGCGCAGGCGCGATTGATAAACGGGTTAAAAATGCAc < 1:5236958/140‑1 (MQ=255) aaaaGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCCGCGAAGCATGGAAAGGCTGGCGCGCAGGCGCGATTGATAAACGGGTTAAAAATGCAc < 1:9213522/140‑1 (MQ=255) aaaaGAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCCGCGAAGCATGGAAAGGCTGGCGCGCAGGCGCGATTGATAAACGGGTTAAAAATGCAc < 1:9815596/140‑1 (MQ=255) acacacaCAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCCGCGAAGCATGGAAAGGCTGGCGCGCAGGCGCGATTGATACACGGGTTAAAAATGCAcc < 1:8157927/134‑1 (MQ=255) gAAACAAGGAAAGTAGTTATGGATGTACCGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCCGCGAAGCATGGAAAGGCTGGCGCGCAGGCGCGATTGATAAACGGGTTAAAAATGCACCGGa < 1:1656928/140‑1 (MQ=255) gAAACAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCCGCGAAGCATGGAAAGGCTGGCGCGCAGGCGCGATTGATAAACGGGTTAAAAATGCACCGGa < 1:2157872/140‑1 (MQ=255) aaaCACGGACAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGGTTCCGCGAAGCATGGAAAGGCTGGCGCGCAGGCGCGATTGATAAACGGGTTAAAAATGCACCGGaa < 2:9066729/140‑1 (MQ=255) aaCAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCCGCGAAGCATGGAAAGGCTGGCGCGCAGGCGCGATTGATAAACGGGTTAAAAATGCACCGGAAc < 2:3396521/140‑1 (MQ=255) aaCAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCCGCGAAGCATGGAAAGGCTGGCGCGCAGGCGCGATTGATAAACGGGTTAAAAATGCACCGGAAc < 2:3061810/140‑1 (MQ=255) aaCAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCCGCGAAGCATGGAAAGGCTGGCGCGCAGGCGCGATTGATAAACGGGTTAAAAATGCACCGGAAc < 2:8058263/140‑1 (MQ=255) aaCAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCCGCGAAGCATGGAAAGGCTGGCGCGCAGGCGCGATTGATAAACGGGTTAAAAATGCACCGGAAc < 2:8171588/140‑1 (MQ=255) aaCAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCCGCGAAGCATGGAAAGGCTGGCGCGCAGGCGCGATTGATAAACGGGTTAAAAATGCACCGGAAc < 1:9164797/140‑1 (MQ=255) aCAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCGTTTTTTTTCCTTATCCCGATATTTTGTTTCCGCGAAGCATGGAAAGGCTGGCGCGCAGGCGCGATTGATACACGGGTTAAAAATGCACCGGAAc < 2:2734850/140‑1 (MQ=255) aCAAGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCCGCGAAGCATGGAAAGGCTGGCGCGCAGGCGCGATTGATAAACGGGTTAAAAATGCACCGGAAcc < 2:122444/140‑1 (MQ=255) aGGAAAGTAGTTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCCGCGAAGCATGGAAAGGCTGGCGCGCAGGCGCGATTGATAAACGGGTTAAAAATGCACCGGAACCGgt < 1:9536164/140‑1 (MQ=255) | TTTTTAAACGTGAACCGCGTTTTTTAGGGCCGCTGGTCCCTATTCCGGCTATGCACCAGGTACCGGAAGATGCGCAGGGGTATCCCGCCGTCACACCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAATTATGGATGTACAGCAGTTTTTTGTCGTTGCCG‑TTTTTTTCCTTATCCCGATATTTTGTTTCCGCGAAGCATGGAAAGGCTGGCGCGCAGGCGCGATTGATAAACGGGTTAAAAATGCACCGGAACCGGTGTATG > NZ_CP025268/2237496‑2237767 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |