Predicted mutation
evidence seq id position mutation annotation gene description
RA NZ_CP025268 3,090,561 C→T intergenic (+397/‑27) metK → / → galP methionine adenosyltransferase/galactose/proton symporter

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NZ_CP0252683,090,5610CT99.0% 1549.7 / NA 412intergenic (+397/‑27)metK/galPmethionine adenosyltransferase/galactose/proton symporter
Reads supporting (aligned to +/- strand):  ref base C (0/0);  major base T (352/54);  minor base G (4/0);  total (358/54)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 424 total aligned reads displayed.

TTTAATCTATGATGATATAACTCAATTATTTTCATGCACTTAAATCATAACTAAGATAAATGTTAGTGTAAGCGATTACACTGATGTGATTTGCTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAACAAAAAATAACCATATTGGAGGGCATCATGCCTGACGCTAAAAAACAGGGGCGGTCAAACAAGGCAATGACGTTTTTCGTCTGCTTCCTTGCCGCTCTGGCGGGATTACTCTTTGGCCTGGATATCGGTGTAATTGC  >  NZ_CP025268/3090425‑3090697
                                                                                                                                        |                                                                                                                                        
tttAATCTATGATGATATAACTCAATTATTTTCATGCACTTAAATCATAACTAAGATAAATGTTAGTGTAAGCGATTACACTGATGTGATTTGCTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATaaa                                                                                                                                       >  2:1211229/1‑140 (MQ=255)
 ttAATCTATGATGATATAACTCAATTATTTTCATGCACTTAAATCATAACTAAGATAAATGTTAGTGTAAGCGATTACACTGATGTGATTTGCTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATaaaa                                                                                                                                      >  1:1712396/1‑140 (MQ=255)
   aaTCTATGATGATATTACTCAATTATTTTCATGCACTTAAATCATAACTCAGATAAATGTTAGTGTAAGCGATTACACTGATGTGATTTGCTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATaaaaaa                                                                                                                                    >  2:335940/1‑140 (MQ=255)
    aTCTATGATGATATAACTCAATTATTTTCATGCACTTAAATCATAACTAAGATAAATGTTAGTGTAAGCGATTACACTGATGTGATTTGCTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATAAAAAAt                                                                                                                                   <  1:5197818/140‑1 (MQ=255)
      cgatgctgAAATAACTCACTTATTTTCATGCACTTAACACCTAACTAAGATAAAAGATAGTGTAAGCGATTACACTGATGTGATTTGCTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACCATAAAAAATaa                                                                                                                                 <  2:8401224/138‑1 (MQ=255)
        atgatgATATAACTCAATTATTTTCATGCACTTAAATCATAACTAAGATAAATGTTAGTGTAAGCGATTACACTGATGTGATTTGCTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATAAAAAATAAca                                                                                                                               >  2:10089303/1‑139 (MQ=255)
        atgatgATATAACTCAATTATTTTCATGCACTTAAATCATAACTAAGAAAAATGTTAGTGTAAGCGATTACACTGATGTGATTTGCTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAAGAAAAAATAAcc                                                                                                                               >  2:5173771/1‑140 (MQ=255)
                    cTCAATTATTTTCATGCACTTAAATCATAACTAAGATAAATGTTAGTGTAAGCGATTACACTGATGTGATTTGCTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATAAAAAATAACCATATTGGAGGGc                                                                                                                   >  1:7300302/1‑140 (MQ=255)
                    cTCAATTATTTTCATGCACTTAAATCATAACTAAGATAAATGTTAGTGTAAGCGATTACACTGATGTGATTTGCTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATAAAAAATAACCATATTGGAGGGc                                                                                                                   >  2:3957179/1‑140 (MQ=255)
                     tCAATTATTTTCATGCACTTAAATCATAACTAAGATAAATGTTAGTGTAAGCGATTACACTGATGTGATTTGCTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATAAAAAATAACCAGAGTGGAGGGca                                                                                                                  >  1:6569957/1‑140 (MQ=255)
                     acAAATATTATCATGCACTTAATTCATAACTAAGAGTCATGTTAGTGTAAGCGAGGACACTGAGGTGATTTGCTTCACATCTTTTTACGTCGTACTCGCCTATCTGAATTCACCATAATAATGTACCATCTGGGAGGGcc                                                                                                                  >  2:1069879/2‑139 (MQ=255)
                       aaTTATTTTCATGCACTTAAATCATAACTAAGATAAATGTTAGTGTAAGCGATTACACTGATGTGATTTGCTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATAAAAAATATCCATATTGGAGGGcatc                                                                                                                >  1:10772120/1‑140 (MQ=255)
                        attattTTCATGCACTTAAATCATAACTAAGATAAATGTTAGTGTAAGCGATTACACTGATGTGATTTGCTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATAAAAAATAACCATATTGGAGGGcatca                                                                                                               >  2:5304556/1‑140 (MQ=255)
                         ttattTTCATGCACTTAAATCATAACTAAGATAAATGTTAGTGTAAGCGATTACACTGATGTGATTTGCTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATAAAAAATAACCATATTGGAGGGcatcat                                                                                                              >  1:6180983/1‑140 (MQ=255)
                         ttattTTCATGCACTTAAATCATAACTAAGATAAATGTTAGTGTAAGCGATTACACTGATGTGATTTGCTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATAAAAAATAACCATATTGGAGGGcatcat                                                                                                              >  1:3005266/1‑140 (MQ=255)
                              ttCATGCACTTAAATCATAACTAAGATAAATGTTAGTGTAAGCGATTACACTGATGTGATTTGCTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATAAAAAATAACCATATTGGAGGGCATCATGCCTg                                                                                                         >  1:671558/1‑140 (MQ=255)
                              ttCATGCACTTAAATCATAACTAAGATAAATGTTAGTGTAAGCGATTACACTGATGTGATTTGCTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATAAAAAATAACCATATTGGAGGGCATCATGCCTg                                                                                                         >  1:9038469/1‑140 (MQ=255)
                               tCATGCACTTAAATCATAACTAAGATAAATGTTAGTGTAAGCGATTACACTGATGTGATTTGCTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATAAAAAATAACCATATTGGAGGGCATCATGCCTGa                                                                                                        <  1:1211229/140‑1 (MQ=255)
                                   gCACTTAAATCATAACTAAGATAAATGTTAGTGTAAGCGATTACACTGATGTGATTTGCTTCACATCTTTTTACGTCGTACTCACCTCTCTTAATTCACAATAAAAAATAACCATATTGGAGGGCATCATGCCTGACGCt                                                                                                    >  2:1460237/1‑140 (MQ=255)
                                      catAAATCATAACTAAGATAAATGTTAGTGTAAGCGATTACACTGATGTGATTTGCTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATAAAAAATAACCATATAGGAGGGCATCATGCCTGACGCTaaa                                                                                                 >  2:6662617/3‑140 (MQ=255)
                                      cTTAAATCATAACTAAGATAAATGTTAGTGTAAGCGATTACACTGATGTGATTTGCTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATAAAAAATAACCATAGTGGAGGGCATCATGCCTGAGGCTaga                                                                                                 >  1:11028074/1‑138 (MQ=255)
                                               tAACTAAGATAAATGTTAGTGTAAGCGATTACACTGATGTGATTTGCTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATAAAAAATAACCATATTGGAGGGCATCATGCCTGACGCTAAAAATCAgggg                                                                                        >  1:7797373/1‑140 (MQ=255)
                                               tAACTAAGATAAATGTTAGTGTAAGCGATTACACTGATGTGATTTGCTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATAAAAAATAACCATATTGGAGGGCATCATGCCTGACGCTAAAAAACAgggg                                                                                        >  2:1995297/1‑140 (MQ=255)
                                               tAACTAAGATAAATGTTAGTGTAAGCGATTACACTGATGTGATTTGCTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATAAAAAATAACCATATTGGAGGGCATCATGCCTGACGCTAAAAAACAgggg                                                                                        >  1:4942021/1‑140 (MQ=255)
                                               tAACTAAGATAAATGTTAGTGTAAGCGATTACACTGATGTGATTTGCTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATAAAAAATAACCATATTGGAGGGCATCATGCCTGAAGCTAAACAACAgggg                                                                                        >  2:9323203/1‑140 (MQ=255)
                                                 aCTAAGATAAATGTTAGTGTAAGCGATTACACTGATGTGATTTGCTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATAAAAAATAACCATATTGGAGGGCATCATGCCTGACGCTAAAAAACAGGGGCg                                                                                      >  1:260553/1‑140 (MQ=255)
                                                       aTAAATGTTAGTGTAAGCGATTACACTGATGTGATTTGCTTCACATCTTTATACGTCGTACTCACCTATCTTAATTCACAATAAAAAATAAACATATTGTAGGGCATCATGCCTGTCGCTAAAAAACAGGGTCGGTCaaa                                                                                >  2:7023878/1‑140 (MQ=255)
                                                             gTTAGTGTAAGCGATTACACTGATGTGATTTGCTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATAAAAAATAACCATATTGGa                                                                                                                       <  1:3245487/95‑1 (MQ=255)
                                                             gTTAGTGTAAGCGATTACACTGATGTGATTTGCTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATAAAAAATAACCATATTGGAGGGCATCATGCCTGACGCTAAAAAACAGGGGCGGTCAAACAAGGc                                                                          >  1:10605653/1‑140 (MQ=255)
                                                                aGTGTAAGCGATTACACTGATGTGATTTGCTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATAAAAAATAACCATATTGGAGGGCATCATGCCTGACGCTAAAAAACAGGGGCGGTCAAACAAGGCAAt                                                                       >  1:8205822/1‑140 (MQ=255)
                                                                aGTGTAAGCGATTACACTGATGTGATTTGCTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATAAAAAATAACCATATTGGAGGGCATCATGCCTGACGCTAAAAAACAGGGGCGGTCAAACAAGGCAAt                                                                       >  2:1885118/1‑140 (MQ=255)
                                                                aGTGTAAGCGATTACACTGATGTGATTTGCTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATAAAAAATAACCATATTGGAGGGCATCATGCCTGACGCTAAAAAACAGGGGCGGTCAAACAAGGCAAt                                                                       >  1:3096232/1‑140 (MQ=255)
                                                                 gtgtAAGCGATTACACTGATGTGATTTGCTTCACATCTTTTTACGTCGTACTCACCTCTCTTAATTCCCACTCAAAAATAACCATATTGGAGGGCATCATGCCTGCCGCTACAAAACAGGGGCGGTCAAACAAGGCACTg                                                                      >  2:8727678/1‑140 (MQ=255)
                                                                 gtgtAAGCGATTACACTGATGTGATTTGCTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATAAAAAATAACCATATTGGAGGGCATCATGCCTGACGCTAAAAAACAGGGGCGGTCAAACAAGGCAATg                                                                      >  2:2165011/1‑140 (MQ=255)
                                                                 gtgtAAGCGATTACACTGATGTGATTTGCTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATAAAAAATAACCATATTGGAGGGCATCATGCCTGACGCTAAAAAACAGGGGCGGTCAAACAAGGCAATg                                                                      >  2:8160692/1‑140 (MQ=255)
                                                                 gtgtAAGCGATTACACTGATGTGATTTGCTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATAAAAAATAACCATATTGGAGGGCATCATGCCTGACGCTAAAAAACAGGGGCGGTCAAACAAGGCAATg                                                                      >  2:6518652/1‑140 (MQ=255)
                                                                      aGCGATTACACTGATGTGATTTGCTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATAAAAAATaa                                                                                                                                 >  2:3614968/1‑76 (MQ=255)
                                                                      aGCGATTACACTGATGTGATTTGCTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATAAAAAATaa                                                                                                                                 <  1:3614969/76‑1 (MQ=255)
                                                                      aGCGATTACACTGATGTGATTTGCTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATAAAAAATAACCATATTGGAGGGCATCATGCCTGACGCTAAAAAACAGGGGCGGTCAAACAAGGCAATGACGtt                                                                 >  2:749736/1‑140 (MQ=255)
                                                                      aGCGATTACACTGATGTGATTTGCTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATAAAAAATAACCATATTGGAGGGCATCATGCCTGACGCTAAAAAACAGGGGCGGTCAAACAAGGCAATGACGtt                                                                 >  1:5813279/1‑140 (MQ=255)
                                                                      aGCGATTACACTGATGTGATTTGCTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATAAAAAATAACCATATTGGAGGGCATCATGCCTGACGCTAAAAAACAGGGGCGGTCAAACAAGGCAATGACGtt                                                                 >  1:751913/1‑140 (MQ=255)
                                                                      aGCGATTACACTGATGTGATTTGCTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATAAAAAATAACCAGATTGGAGGGCATCATGCCTGACGCTAAAAAACAGGGGCGGTCAAACAAGGCAATGACGtt                                                                 >  1:8811819/1‑140 (MQ=255)
                                                                          aTTACACTGATGTGATTTGCTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATAAAAAATAACCATATTGGAGGGCATCATGCCTGACGCTAAAAAACAGGGGCGGTCAAACAAGGCAATGACGTTTTTc                                                             >  1:8426826/1‑140 (MQ=255)
                                                                            tACACTGATGTGATTTGCTTCACATCTTTTTACGTCGTACTCTCATATCTTAATTCACAATAAAAAATAACCAGATTGGAGGGCCTCATGCCTGACGCTAAAAATCAGGGGCGGTCAAACAAGGCAATGACGGTTTTCGt                                                           >  2:7960644/1‑140 (MQ=255)
                                                                            tACACTGATGTGATTTGCTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATAATAAATAACCATATTGGAGGGCATCATGCCTGACGCTAAAAAACAGGGGCGGTCATACAAGGCAATGACGTTTTTCGt                                                           >  2:4024346/1‑140 (MQ=255)
                                                                            tACACTGATGTGATTTGCTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATAAAAAATAACCATATTGGAGGGCATCATGCCTGACGCTAAAAAACCGGGGCGGTCAAACAAGGCAATGACGTTTTTCGt                                                           >  1:1890920/1‑140 (MQ=255)
                                                                            tACACTGATGTGATTTGCTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATAAAAAATAACCATATTGGAGGGCATCATGCCTGACGCTAAAAAACAGGGGCGGTCAAACAAGGCAATGACGTTTTTCGt                                                           >  2:1744530/1‑140 (MQ=255)
                                                                            tACACTGATGTGATTTGCTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATAAAAAATAACCATATTGGAGGGCATCATGCCTGACGCTAAAAAACAGGGGCGGTCAAACAAGGCAATGACGTTTTTCGt                                                           >  1:5377624/1‑140 (MQ=255)
                                                                                 tGATGTGATTTGCTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATAAAAAATAACCATATTGGAGGGCATCATGCCTGACGCTAAAAAACAGGGGCGGTCAAACAAGGCAATGACGTTTTTCGTCTGCt                                                      >  1:10758966/1‑140 (MQ=255)
                                                                                   aTGTGATTTGCTTNACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATAAAAAATAACCATATTGGAGGGCATCATGCCTGACGCTAAAAAACAGGGGCGGTCAAACNAGGCAATGACGTTTTTCGTCTGCTTc                                                    >  1:6259213/1‑140 (MQ=255)
                                                                                   aTGTGATTTGCTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATAATAAATAACCCTATTGGAGGGCCTCATGCCTGACGCTAAAACCCAGGGGCGGTCAATCAAGGCTATGACGTTTTTGGTCTGCtgc                                                    >  2:10317976/1‑138 (MQ=255)
                                                                                   aTGTGATTTGCTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATAAAAAATAACCATATTGGAGGGCATCATGCCTTACGCTAAAAAACTGGGTCGGTCAAACAAGGCAATGACGTTTTTCGTCTGGTTc                                                    >  2:4401713/1‑140 (MQ=255)
                                                                                   aTGTGATTTGCTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATAAAAAATAACCATATTGGAGGGCATCATGCCTGACGCTTAAAAACAGGGGCGGTCAAACAAGGCAATGACGTTTTTCGTCTGCTTc                                                    >  2:11617905/1‑140 (MQ=255)
                                                                                   aTGTGATTTGCTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATAAAAAATAACCATATTGGAGGGCATCATGCCTGACGCTAAAAAACAGGGGCGGTCAAACACGGCAATGACGTTTTTCGTCTGCTTc                                                    >  2:4533684/1‑140 (MQ=255)
                                                                                   aTGTGATTTGCTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATAAAAAATAACCATATTGGAGGGCATCATGCCTGACGCTAAAAAACAGGGGCGGTCAAACAAGGCAATGACGTTTTTCGTCTGCTTc                                                    >  2:9519309/1‑140 (MQ=255)
                                                                                   aTGTGATTTGCTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATAAAAAATAACCATATTGGAGGGCATCATGCCTGACGCTAAAAAACAGGGGCGGTCAAACAAGGCAATGACGTTTTTCGTCTGCTTc                                                    >  1:1333984/1‑140 (MQ=255)
                                                                                   aTGTGATTTGCTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATAAAAAATAACCATATTGGAGGGCATCATGCCTGACGCTAAAAAACAGGGGCGGTCAAACAAGGCAATGACGTTTTTCGTCTGCTTc                                                    >  2:11405710/1‑140 (MQ=255)
                                                                                   aTGTGATTTGCTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATAAAAAATAACCATATTGGAGGGCATCATGCCTGACGCTAAAAAACAGGGGCGGTCAAACAAGGCAATGACGTTTTTCGTCTGCTTc                                                    >  2:6295007/1‑140 (MQ=255)
                                                                                   aTGTGATTTGCTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATAAAAAATAACCATATTGGAGGGCATCATGCCTGACGCTAAAAAACAGGGGCGGTCAAACAAGGCAATGACGTTTTTCGTCTGCTTc                                                    >  1:6337079/1‑140 (MQ=255)
                                                                                   aTGTGATTTGCTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTAACAATAAAAAATAACCATATTGGAGGGCATCTTGCCTGAGGCTAAATTTCAGGGGCGGTCAAACAAGGCAATGAGGTTTTTCGTCTGCGTc                                                    >  2:7727174/1‑140 (MQ=255)
                                                                                    tgtgATTTGCTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATAAAAAATAACCATATTGGAGGGCATCATGCCTGACGCTAAAAAACAGGGGCGGTCAAACAAGGCAATGACGTTTTTCGTCTGCTTcc                                                   >  1:6414547/1‑140 (MQ=255)
                                                                                     gtgATTTGCTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATAAAAAATAACCATATTGGAGGGCATCATGCCTGACGCTAAAAAACAGGGGCGGTCAAACAAGGCAATGACGTTTTTCGTCTGCTTCCt                                                  >  1:9542058/1‑140 (MQ=255)
                                                                                     gtgATTTGCTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATAAAAAATAACCATATTGGAGGGCATCATGCCTGACGCTAAAAAACAGGGGCGGTCAAACAAGGCAATGACGTTTTTCGTCTGCTTCCt                                                  >  1:9401619/1‑140 (MQ=255)
                                                                                     gtgATTTGCTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATAAAAAATAACCATATTGGAGGGCATCATGCCTGACGCTAAAAAACAGGGGCGGTCAAACAAGGCAATGACGTTTTTCGTCTGCTTCCt                                                  >  1:2096819/1‑140 (MQ=255)
                                                                                     gtgATTTGCTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATAAAAAATAACCATAGTGGAGGGCATCATGGCTGACGCTAAAAAACAGGGGCGGTCACACAAGGCAATGTCGTTTTTCGTCTGCTTCCt                                                  >  2:6390082/1‑140 (MQ=255)
                                                                                        aTTTGCTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATAAAAAATAACCATATTGGAGGGCATCATGCCTGACGCTAAAAAACAGGGGCGGTCAAACAAGGCAATGACGTTTTTCGTCTGCTTCCTTGc                                               >  1:9773545/1‑140 (MQ=255)
                                                                                        aTTTGCTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATAAAAAATAACCATATTGGAGGGCATCATGCCTGACGCTAAAAAACAGGGGCGGTCAAACAAGGCAATGACGTTTTTCGTCTGCTTCCTTGc                                               >  1:457678/1‑140 (MQ=255)
                                                                                        aTTTGCTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATAAAAAATAACCATATTGGAGGGCATCATGCCTGACGCTAAAAAACAGGGGCGGTCAAACAAGGCAATGACGTTTTTCGTCTGCGTCCTTGc                                               >  1:6940473/1‑140 (MQ=255)
                                                                                             cTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATAAAAAATAACCATATTGGAGGGCATCATGCCTGACGCTAAAAAACAGGGGCGGTCAAACAAGGCAATGACGTTTTTCGTCTGCTTCCTTGCCGctc                                          >  1:10093221/1‑140 (MQ=255)
                                                                                             cTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATAAAAAATAACCATATTGGAGGGCATCATGCCTGACGCTAAAAAACAGGGGCGGTCAAACAAGGCAATGACGTTTTTCGTCTGCTTCCTTGCCGctc                                          >  2:5483358/1‑140 (MQ=255)
                                                                                             cTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATAAAAAATAACCATATTGGAGGGCATCATGCCTGACGCTAAAAAACAGGGGCGGTCAAACAAGGCAATGACGTTTTTCGTCTGCTTCCTTGCCGctc                                          >  2:5971563/1‑140 (MQ=255)
                                                                                             cTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATAAAAAATAACCATATTGGAGGGCATCATGCCTGACGCTAAAAAACAGGGGCGGTCAAACAAGGCAATGACGTTTTTCGTCTGCTTCCTTGCCGctc                                          >  2:6810323/1‑140 (MQ=255)
                                                                                             cTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATAAAAAATAACCATATTGGAGGGCATCATGCCTGACGCTAAAAAACAGGGGCGGTCAAACAAGGCAATGACGTTTTTCGTCTGCTTCCTTGCCGctc                                          >  1:7749546/1‑140 (MQ=255)
                                                                                             cTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATAAAAAATAACCATATTGGAGGGCATCATGCCTGACGCTAAAAAACAGGGGCGGTCAAACAAGGCAATGACGTTTTTCGTCTGCTTCCTTGCCGctc                                          >  1:4437613/1‑140 (MQ=255)
                                                                                             cTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAATAAAAAATAACCATATTGGAGGGCATCATGCCTGACGCTAAAAAACAGGGGCGGTCAAACAAGGCAATGACGTTTTTCGTCTGCTTCCTTGCCGctc                                          >  1:2224822/1‑140 (MQ=255)
                                                                                             cTTCACATCTTTTTACGTCGTACTCACCTAACTTAATTCACAATAAAAAATAACCATATTGGAGGGCATCATGCCTGACGCTAAAAAACAGGGGCGGTCAAACAAGGCAATGACGTTTTTCGTCTGCTTCCTTGCCGctc                                          >  2:2414318/1‑140 (MQ=255)
                                                                                                       ttttACGTCGTACTCACCTATCTTAATTCACAATAAAAAATAACCATATTGGAGGGCATCATGCCTGACGCTAAAAAACAGGGGCGGTCAAACAAGGCAATGACGTTTTTCGTCTGCTTCCTTGCCGCTCTGGCGGGAtt                                <  2:2526138/140‑1 (MQ=255)
                                                                                                             gtcgtACTCACCTATCTTAATTCACAATAAAAAATAACCATATTGGAGGGCATCATGCCTGACGCTAAAAAACAGGGGCGGTCAAACAAGGCAATGACGTTTTTCGTCTGCTTCCTTGCCGCTCTGGCGGGATTACTCtt                          >  1:1314541/1‑140 (MQ=255)
                                                                                                               cgtACTCACCTATCTTAATTCACAATAAAAAATAACCATATTGGAGGGCATCATGCCTGACGCTAAAAAACAGGGGCGGTCAAACAAGGCAATGACGTTTTTCGTCTGCTTCCTTGCCGCTCTGGCGGGATTACTCTTTg                        >  2:2967034/1‑140 (MQ=255)
                                                                                                               cgtACTCACCTATCTTAATTCACAATAAAAAATAACCATATTGGAGGGCATCATGCCTGACGCTAAAAAACAGGGGCGGTCAAACAAGGCAATGACGTTTTTCGTCTGCTTCCTTGCCGCTCTGGCGGGATTACTCTTTg                        >  1:7851487/1‑140 (MQ=255)
                                                                                                               cgtACTCACCTATCTTAATTCACAATAAAAAATAACCATATTGGAGGGCATCATGCCTGACGCTAAAAAACAGGGGCGGTCAAACAAGGCAATGACGTTTTTCGTCTGCTTCCTTGCCGCTCTGGCGGGATTACTCTTTg                        >  1:3991199/1‑140 (MQ=255)
                                                                                                               cgtACACACCTATCTTAATTCACAATAAAAAAAAACCATATTGGAGGGCATAATGCCTGACGCTCAAAAACAGGTGCGGTCAAAAAAGGAAATGACGTTTTTCGTCTGCTTCCTTGCCGCTCAGGCGGGATTActctgag                        >  2:11321691/1‑137 (MQ=255)
                                                                                                                gtACTCACCTATCTTAATTCACAATAAAAAATAACCATATTGGAGGGCATCATGCCTGACGCTAAAAAACAGGGGCGGTCAAACAAGGCAATGACGTTTTTCGTCTGCTTCCTTGCCGCTCTGGCGGGATTACTCTTTgg                       >  1:10361693/1‑140 (MQ=255)
                                                                                                                 tACTCACCTATCTTAATTCACAATAAAAAATAACCATATTGGAGGGCATCATGCCTGACGCTAAAAAACAGGGGCGGTCAAACAAGGCAATGACGTTTTTCGTCTGCTTCCTTGCCGCTCTGGCGGGATTACTCTTTGGc                      <  2:1333984/140‑1 (MQ=255)
                                                                                                                      aCCTATCTTAATTCACAATAAAAAATAACCATATTGGAGGGCATCATGCCTGACGCTAAAAAACAGGGGCGGTCAAACAAGGCAATGACGTTTTTCGTCTGCTTCCTTGCCGCTCTGGCGGGATTACTCTTTGGCCTGGa                 >  2:2836220/1‑140 (MQ=255)
                                                                                                                        cTATCTTAATTCACAATAAAAAATAACCATATTGGAGGGCATCATGCCTGACGCTAAAAAACAGGGGCGGTCAAACAAGGCAATGACGTTTTTCGTCTGCTTCCTTGCCGCTCTGGCGGGATTACTCTTTGGCCTGGata               >  2:6177689/1‑140 (MQ=255)
                                                                                                                         tATCTTAATTCACAATAAAAAATAACCATATTGGAGGGCATCATGCCTGACGCTAAAAAACAGGGGCGGTCAAACAAGGCAATGACGTTTTTCGTCTGCTTCCTTGCCGCTCTGGCGGGATTACTCTTTGGCCTGGatat              <  2:496729/140‑1 (MQ=255)
                                                                                                                         tATCTTAATTCACAATAAAAAATAACCATATTGGAGGGCATCATGCCTGACGCTAAAAAACAGGGGCGGTCAAACAAGGCAATGACGTTTTTCGTCTGCTTCCTTGCCGCTCTGGCGGGATTACTCTTTGGCCTGGatat              <  1:1995297/140‑1 (MQ=255)
                                                                                                                           tCTTAATTCACAATAAAAAATAACCATATTGGAGGGCATCATGCCTGACGCTAAAAAACAGGGGCGGTCAAACAAGGCAATGTCGTTTTTCGTCTGCTTCCTTGCCGCTCTGGCGGGATTACTCTTTGGCCTGGAGATCg            >  1:11367683/1‑140 (MQ=255)
                                                                                                                           tCTTAATTCACAATAAAAAATAACCATATTGGAGGGCATCATGCCTGACGCTAAAAAACAGGGGCGGTCAAACAAGGCAATGACGTTTTTCGTCTGCTTCCTTGCCGCTCTGGCGGGATTACTCTTTGGCCTGGATATCg            >  1:8462566/1‑140 (MQ=255)
                                                                                                                           tCTTAATTCACAATAAAAAATAACCATATTGGAGGGCATCATGCCTGACGCTAAAAAACAGGGGCGGTCAAACAAGGCAATGACGTTTTTCGTCTGCTTCCTTGCCGCTCTGGCGGGATTACTCTTTGGCCTGGATATCg            >  1:5905752/1‑140 (MQ=255)
                                                                                                                                aTTCACAATAAAAAATAACCATATTGGAGGGCATCATGCCTGACGCTAAAAAACAGGGGCGGTCAAACAAGGCAATGACGTTTTTCGTCTGCTTCCTTGCCGCTCTGGCGGGATTACTCTTTGGCCTGGATATCGGTGTa       >  2:227838/1‑140 (MQ=255)
                                                                                                                                aTTCACAATAAAAAATAACCATATTGGAGGGCATCATGCCTGACGCTAAAAAACAGGGGCGGTCAAACAAGGCAATGACGTTTTTCGTCTGCTTCCTTGCCGCTCTGGCGGGATTACTCTTTGGCCTGGATATCGGTGTa       >  2:1102899/1‑140 (MQ=255)
                                                                                                                                aTTCACAATAAAAAATAAACATATTGGAGGGCATCATGCCTGACGCTAAAAAAAAGGGGCGGTCAAACAAGGCAATGACGTTTTTCGTCTGCTTCCTTGCCGCTCTCGCGGGATTACTCTTTGGCCTGGATATCGGTGTa       >  1:9256882/1‑140 (MQ=255)
                                                                                                                                  tCACAATAAAAAATAAGCATATTGGAGGGCATCATGCCTGACGCTAAAAAACAGGGGCGGTCAATCAAGGCAATGACGTTTTTAGTCTGCTTCCTTGCCGCTCTGGCGGGATTACTCTTTGGCCTGGATATCGGTTTAAt     >  2:9635720/1‑140 (MQ=255)
                                                                                                                                     caataaAAAATAACCATATTGGAGGGCATCATGCCTGACGCTAAAAAACAGGGGCGGTCAAACAAGGCAATGACGTTTTTCGTCTGCTTCCTTGCCGCTCTGGCGGGATTACTCTTTGGCCTGGatat              <  2:5584392/128‑1 (MQ=255)
                                                                                                                                     caataaAAAATAACCATATTGGAGGGCATCATGCCTGACGCTAAAAAACAGGGGCGGTCAAACAAGGCAATGACGTTTTTCGTCTGCTTCCTTGCCGCTCTGGCGGGATTACTCTTTGGCCTGGATATCGGTGTAATTGc  >  1:5554971/1‑140 (MQ=255)
                                                                                                                                     caataaAAAATAACCATATTGGAGGGCATCATGCCTGACGCTAAAAAACAGGGGCGGTCAAACAAGGCAATGACGTTTTTCGTCTGCTTCCTTGCCGCTCTGGCGGGATTACTCTTTGGCCTGGATATCGGTGTAATTGc  >  1:2425357/1‑140 (MQ=255)
                                                                                                                                     caataaAAAATAACCATATTGGAGGGCATCATGCCTGACGCTAAAAAACAGGGGCGGTCAAACAAGGCAATGACGTTTTTCGTCTGCTTCCTTGCCGCTCTGGCGGGATTACTCTTTGGCCTGGATATCGGTGTAATTGc  >  1:9329156/1‑140 (MQ=255)
                                                                                                                                     caataaAAAATAACCATATTGGAGGGCATCATGCCTGACGCTAAAAAACAGGGGCGGTCAAACAAGGCAATGACGTTTTTCGTCTGCTTCCTTGCCGCTCTGGCGGGATTACTCTTTGGCCTGGATATCGGTGTAATTGc  >  2:5881841/1‑140 (MQ=255)
                                                                                                                                        |                                                                                                                                        
TTTAATCTATGATGATATAACTCAATTATTTTCATGCACTTAAATCATAACTAAGATAAATGTTAGTGTAAGCGATTACACTGATGTGATTTGCTTCACATCTTTTTACGTCGTACTCACCTATCTTAATTCACAACAAAAAATAACCATATTGGAGGGCATCATGCCTGACGCTAAAAAACAGGGGCGGTCAAACAAGGCAATGACGTTTTTCGTCTGCTTCCTTGCCGCTCTGGCGGGATTACTCTTTGGCCTGGATATCGGTGTAATTGC  >  NZ_CP025268/3090425‑3090697

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: