| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 3,353,806 | T→C | *310* (TAA→TAG) | yhcC ← | TIGR01212 family radical SAM protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 3,353,806 | 0 | T | C | 99.8% | 2234.4 / NA | 643 | *310* (TAA→TAG) | yhcC | TIGR01212 family radical SAM protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (317/324); minor base A (1/0); total (318/325) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.95e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 643 total aligned reads displayed.
CAGGTCAACATAATACTGCGCCAGCAGACGAATTTGCTTCATTAGGGAATTCCTTCACGACAACCTGCCCCAATAATACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACTTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCGACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCGGGCGACGG > NZ_CP025268/3353669‑3353941 | aGGTCAACATAATACTGCGCCAGCAGACGAATTTGCTTCATTAGGGAATTCCTTCACGACAACCTGCCCCAATAATACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTAc > 2:2085483/1‑140 (MQ=255) aGGTCAACATAATACTGCGCCAGCAGACGAATTTGCTTCATTAGGGAATTCCTTCACGACAACCTGCCCCAATAATACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTAc < 1:9777571/140‑1 (MQ=255) aGGTCAACATAATACTGCGCCAGCAGACGAATTTGCTTCATTAGGGAATTCCTTCACGACAACCTGCCCCAATAATACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTAc < 1:9409174/140‑1 (MQ=255) aGGTCAACATAATACTGCGCCAGCAGACGAATTTGCTTCATTAGGGAATTCCTTCACGACAACCTGCCCCAATAATACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTAc < 1:7759862/140‑1 (MQ=255) aGGTCAACATAATACTGCGCCAGCAGACGAATTTGCTTCATTAGGGAATTCCTTCACGACAACCTGCCCCAATAATACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTAc < 1:11251375/140‑1 (MQ=255) ggTCAACCTCATACTGCGCCCGCAGACGAATTTGCTGCATTAGGGAATTCCTTCACGACAACCTGCCCCAATAATACCCAAGTCTGACAGGTACGTTATCAATTGTGTGAGACATGCGGAATTCCCCTCAACGACCTACt > 2:1946608/1‑140 (MQ=255) ggTCAACATAATACTGCGCCAGCAGACGAATTTGCTTCATTAGGGAATTCCTTCACGACAACCGGCCCCAAGAATACCCACTTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACt < 2:1615449/140‑1 (MQ=255) accATTATACCGCGCCAGCAGACGAATTTGCTTCATTAGGGAATTCCTTCACGACAACCTGCCCCAATCATACCCACTTCTGACAGGTACGTTATAACTTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGt < 2:666849/138‑1 (MQ=255) aaCATAATACTGCGCCAGCAGACGAATTTGCTTCATTAGGGAATTCCTTCACGACAACCTGCCCCAATAATACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGt > 1:6969358/1‑140 (MQ=255) cATAATACTGCGCCAGCAGACGAATTTGCTTCATTAGGGAATTCCTTCACGACAACCTGCCCCAATAATACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTg > 1:8824292/1‑140 (MQ=255) aataCTGCGCCAGCAGACGAATTTGCTTCATTAGGGAATTCCTTCACGACAACCTGCCCCAATAATACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAg < 1:10474350/140‑1 (MQ=255) aataCTGCGCCAGCAGACGAATTTGCTTCATTAGGGAATTCCTTCACGACAACCTGCCCCAATAATACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAg < 1:5564946/140‑1 (MQ=255) aataCTGCGCCAGCAGACGAATTTGCTTCATTAGGGAATTCCTTCACGACAACCTGCCCCAATAATACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAg < 2:3151229/140‑1 (MQ=255) taCTGCGCCAGCAGACGAATTTGCTTCATTAGGGAATTCCTTCACGACAACCTGCCCCAATAATACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGt > 2:10196962/1‑140 (MQ=255) tGCGCCAGCAGACGAATTTGCTTCATTAGGGAATTCCTTCACGACAACCTGCCCCAATAATACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGc > 1:8675425/1‑140 (MQ=255) cgcCAGCAGACGAATTTGCTTCATTAGGGAATTCCTTCCCGACAACCTGCCCCAATAATACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCa > 2:3348507/1‑140 (MQ=255) cgcCAGCAGACGAATTTGCTTCATTAGGGAATTCCTTCACGACAACCTGCCCCAATAATACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCa > 1:9189136/1‑140 (MQ=255) cgcCAGCAGACGAATTTGCTTCATTAGGGAATTCCTTCACGACAACCTGCCCCAATAATACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCa > 1:9670245/1‑140 (MQ=255) cgcCAGCAGACGAATTTGCTTCATTAGGGAATTCCTTCACGACAACCTGCCCCAATAATACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCa > 1:5252029/1‑140 (MQ=255) cgcCAGCAGACGAATTTGCTTCATTAGGGAATTCCTTCACGACAACCTGCCCCAATAATACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCa > 1:5029784/1‑140 (MQ=255) cgcCAGCAGACGAATTTGCTTCATTAGGGAATTCCTTCACGACAACCTGCCCCAATAATACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCa > 2:6568008/1‑140 (MQ=255) cgcCAGCAGACGAATTTGCTTCATTAGGGAATTCCTTCACGACAACCTGCCCCAATAATACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCa > 1:10663109/1‑140 (MQ=255) cgcCAGCAGACGAATTTGCTTCATTAGGGAATTCCTTCACGACAACCTGCCCCAATAATACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCa > 1:2796161/1‑140 (MQ=255) cgcCAGCAGACGAATTTGCTTCATTAGGGAATTCCTTCACGACAACCTGCCCCAATAATACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCa > 1:169187/1‑140 (MQ=255) cgcCAGCAGACGAATTTGCTTCATTAGGGAATTCCTTCACGACAACCTGCCCCAATAATACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCa > 1:2069280/1‑140 (MQ=255) gacagcagACGAATTTGCTACATTAGGGAATTCCTTCACGACAACCTGCCCCAATAATACACAAATCTGACACTTACGATATAAATTGTGTGAGAAATGCGTAATTCCCCTCAACGACATACTCCGAATGAGGTAGCCAc > 1:3717180/3‑140 (MQ=255) ccAGCAGACGAATTTGCTTCATTAGGGAATTCCTTCACGACAACCTGCCCCAATAATACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACg > 2:2455644/1‑140 (MQ=255) ccAGCAGACGAATTTGCTTCATTAGGGAATTCCTTCACGACAACCTGCCCCAATAATACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACg < 1:6531690/140‑1 (MQ=255) cgcagACGACGTTGCTTCCTTAGGGAAGTCCTTCCCGACAACCCGCCCCAACCAGACCCACTTCTGACAGTTACGTTATACATTGAGTGAGAAATGCGGAATTCCCCTCAACGACCTCCTCCGTTGGAGGTAGCCACGGa < 2:1472344/139‑1 (MQ=255) agcagACGAATTTGCTTCATTAGGGAATTCCTTCACGACAACCTGCCCCACTAATCCCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGa < 1:3016768/140‑1 (MQ=255) agcagACGAATTTGCTTCATTAGGGAATTCCTTCACGACAACCTGCCCCAATAATACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTCGCCACGGa > 2:1295426/1‑140 (MQ=255) agcagACGAATTTGCTTCATTAGGGAATTCCTTCACGACAACCTGCCCCAATAATACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGa < 1:4567773/140‑1 (MQ=255) agcagACGAATTTGCTTCATTAGGGAATTCCTTCACGACAACCTGCCCCAATAATACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGa < 1:7281620/140‑1 (MQ=255) agcagACGAATTTGCTTCATTAGGGAATTCCTTCACGACAACCTGCCCCAATAATACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGa < 1:2563843/140‑1 (MQ=255) gcagACGAATTTGCTTCATTAGGGAATTCCTTCACGACAACCTGCCCCAATAATACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGAc < 1:10052292/140‑1 (MQ=255) gcagACGAATTTGCTTCATTAGGGAATTCCTTCACGACAACCTGCCCCAATAATACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGAc > 1:190191/1‑140 (MQ=255) acttctttGCTTCATTAGGGAATTCCTACACGACAACCTGCCCCAATAATTCCCAATTCTGACAGTGACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCACCGACCTACTCCGTTGGAGGTAGCCACGGACGTcc < 2:8966143/135‑1 (MQ=255) aCGAATTTGCTTCATTAGGGAATTCCTTCACGACAACCTGCCCCAATCATACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAAGTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTcc < 1:4304924/140‑1 (MQ=255) cGAATTTGCTTCATTAGGGAATTCCTTCACGACAACCTGCCCCAATAATACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTccc < 2:10911937/140‑1 (MQ=255) tGCTTCATTAGGGAATTCCTTCACGACAACCTGCCCCAATAATACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGcc < 1:11485161/140‑1 (MQ=255) tGCTTCATTAGGGAATTCCTTCACGACAACCTGCCCCAATAATACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGcc < 2:4704100/140‑1 (MQ=255) tGCTTCATTAGGGAATTCCTTCACGACAACCTGCCCCAATAATACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGcc < 2:9413128/140‑1 (MQ=255) tGCTTCATTAGGGAAGTCCTTCACGACAACCTGCCCCAATAATACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGcc < 1:4488126/140‑1 (MQ=255) gCTTCTTTAGGGAATTCCTTCTCGACAACCTGCCCCAAGACTACCCAAATCTGACAGTTACGTTATAAATTGGGTGAGAAAGGCGGACTTCCCATCTACGACCTCCTGCGTTGGAGGTAGCCACGGTCGTCCCAGCGCCg > 2:10407953/1‑140 (MQ=255) cTTCATGAGGGAATTCCTTCACGACAACCTGCCCCAATAATCCCCAATACTGACAGTTACGTTATAAATTGTGTGAGACCTGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGa < 2:7577617/140‑1 (MQ=255) ttCATTAGGGAATTCCTTCACGACAACCTGCCCCAATAATACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGAt < 1:2295695/140‑1 (MQ=255) ttCATTAGGGAATTCCTTCACGACAACCTGCCCCAATAATACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGAt < 1:11328643/140‑1 (MQ=255) ttCATTAGGGAATTCCTTCACGACAACCTGCCCCAATAATACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGAt < 2:1072723/140‑1 (MQ=255) ttCATTAGGGAATTCCTTCACGACAACCTGCCCCAATAATACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGAt < 1:10901270/140‑1 (MQ=255) tgaGGGAAGTCCTTCACGACAACCTGCCCCACTAATACCCAATTCTGACAGTGACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCACCGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCt < 2:426262/138‑1 (MQ=255) tAGGGAATTCCTTCACGACAACCTGCCCCAATAATACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTg < 1:5809214/140‑1 (MQ=255) aaTTCCTTCACGACAACCTGCCCCAATATTAACCATTTCTGACAGTTACGTTATAAATTGTGTGAGAATTGCGGTATTCCCCTCAACGACCTACTCCGTTGGTGGTAGCCTCGGACGTCCCAGCGCCGATCCCTGTACGc < 1:7980067/140‑1 (MQ=255) ttCCTTCACGACAACCTGCCCCACGAATCCCCAATTCTGACAGTTACGTTATACATTGTGTGAGAAATGCGGAATTCCCCTCACCGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCa < 2:9610914/140‑1 (MQ=255) ttCCTTCACGACAACCTGCCCCAATAATACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCa < 1:10085288/140‑1 (MQ=255) ttCCTTCACGACAACCTGCCCCAATAATACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCa > 1:10956880/1‑140 (MQ=255) ttCCTTCACGACAACCTGCCCCAATAATACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCa > 1:3393039/1‑140 (MQ=255) tCCTTCACGACAACCTGCCCCAATAATACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCAt > 2:3951942/1‑140 (MQ=255) ccTTCACGACAACCTGCCCCAATAATACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATg < 1:3951943/140‑1 (MQ=255) ttCACGACAACCTGCCCCAATTATACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGtt < 2:574914/140‑1 (MQ=255) aCGACAACCTGCCCCAATAATCCCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGttcat < 1:5435792/140‑1 (MQ=255) gACAACCTGCCCCAATAATACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGttcattc < 1:3216698/140‑1 (MQ=255) gACAACCTGCCCCAATAAGACCCACTTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGGACGCCATGttcattc < 1:6376219/140‑1 (MQ=255) aCAACCTGCCCCAATAATACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGttcattca > 1:7590006/1‑140 (MQ=255) taCCTGCCCCCATAAGACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCACCGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTCCGCCATGTTCATTCAGa < 2:2574679/139‑1 (MQ=255) aaCCTGCCCCAATAATACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGa < 2:11433885/140‑1 (MQ=255) aCCTGCCCCAATAATACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGAt > 1:825844/1‑140 (MQ=255) ccTGCGCCAATAATACCCAATTCTGACCGGTAGGTTATAAATTGTGTGAGTAATGGGGAATTCCGCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCAGTCAGAtg > 2:5355817/1‑139 (MQ=255) cccAATAATACCCAATTCTGACAGTTACGTTATAAATTGTGAGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGATGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGAt < 2:3011326/140‑1 (MQ=255) ataataCCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAg < 1:5123537/140‑1 (MQ=255) taataCCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGc < 2:5551947/140‑1 (MQ=255) ataCCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTc < 2:169187/140‑1 (MQ=255) aCCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCGAGCTCGa > 2:7781932/1‑140 (MQ=255) aCCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCGa > 1:6067332/1‑140 (MQ=255) aCCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCGa > 2:112050/1‑140 (MQ=255) aCCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCGa < 1:2349029/140‑1 (MQ=255) cAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCGACCa > 1:475936/1‑140 (MQ=255) aaTTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCGACCAt > 1:9922954/1‑140 (MQ=255) aaTTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCGACCAt > 2:8789998/1‑140 (MQ=255) ttCTGTCAGGTACGTGATCCATGGTGTGAGAAATGCGGAATTCCCCTCCACGACCTACTCCGTTGGAGGTCGCCACGGACGTCCCAGCGCCGATCCCTGGTCGCCATGTTCATGCCGTTAGCGGGCCAGCTCGACCAGTc > 2:3835927/1‑140 (MQ=255) ttCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCACAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCGACCATTc > 2:3491244/1‑140 (MQ=255) ttACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTGCTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCGACCATTCCCGTCCATc < 2:6279617/140‑1 (MQ=255) ttACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCGACCATTCCCGTCCATc < 2:6784158/140‑1 (MQ=255) ttACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCGACCATTCCCGTCCATc < 2:8508111/140‑1 (MQ=255) tACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCACAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTCCGCCATGTTCATTCAGATAGCGATCCAGCTCGACCATTCCCGTCCATCg < 2:3622829/140‑1 (MQ=255) cGTTATACAGTGTGTGAGCCAGGCGGAATTCCCCTCAACGACCTACTCCGATGGAGGTAGCCACGGACGTCCCCGCGCCGATCCCTGTACGCCATGTTCATTCAGATATCGATCCAGCTCGACCAGTCCCGTCCATCGAt < 2:5158447/140‑1 (MQ=255) cGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCGACCATTCCCGTCCATCGAt < 1:669578/140‑1 (MQ=255) cGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCGACCATTCCCGTCCATCGAt < 1:8476845/140‑1 (MQ=255) cGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCGACCATCCCCGTCCATCGAt < 1:9999822/140‑1 (MQ=255) gTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCGACCATTCCCGTCCTTCGAtt > 2:7939159/1‑140 (MQ=255) taAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCGACCATTCCCGTCCATCGATTTTCg < 2:7282155/140‑1 (MQ=255) aagtgtctgCGAAATGCGGAATGCCCCTCCACGCCCGACTCCGTTGGAGGTAGCCACGGACGCCCCAGCGCCGATCCCTGGACGCCCGGGTCATTCAGAGAGCGATCCCGCTCGACCATGCCCGTCCATCGATTTTCGcc < 2:6075756/137‑2 (MQ=255) gtgtgAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCGACCATTCCCGTCCATCGATTTTCGcaccac > 2:4920615/1‑140 (MQ=255) gtgtgAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCGACCATTCCCGTCCATCGATTTTCGcaccac > 1:8958906/1‑140 (MQ=255) tgtgAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCGACCATTCCCGTCCCTCGATTGTCGCACcaca > 2:7675028/1‑140 (MQ=255) tgtgAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCGACCATTCCCGTCCATCGATTTTCGCACcaca > 2:8074762/1‑140 (MQ=255) gtgAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCGACCATTCCCGTCCATCGATTTTCGCACCACAg < 1:10263977/140‑1 (MQ=255) gCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCGACCATTCCCGTCCATCGATTTTCGCACCACAGCGGagcaag < 1:6873707/140‑1 (MQ=255) ggAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCGACCATTCCCGTCCATCGATTTTCGCACCACAGCGGagcaagca < 2:9774449/140‑1 (MQ=255) ccccTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCGACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCg < 1:1382341/140‑1 (MQ=255) cacTCAACGACCTACTACGTTGGAGTTAGCAACGGACGTCCCAGCGCCGATCCCTGTACGACAAGTACATTCAGATAGCTATCCATCTCCACCATTCCCGGACAGCGATATACGCACCACAGCGGAGCAAGCAGCGTctg > 2:7079450/3‑138 (MQ=255) | CAGGTCAACATAATACTGCGCCAGCAGACGAATTTGCTTCATTAGGGAATTCCTTCACGACAACCTGCCCCAATAATACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACTTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCGACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCGGGCGACGG > NZ_CP025268/3353669‑3353941 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |