BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NZ_CP025268	4,608,154	G→A	noncoding (48/87 nt)	CXP41_RS23870 ←	tRNA‑Leu

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NZ_CP025268	4,608,154	0	G	A	96.2%	1462.1 / NA	455	noncoding (48/87 nt)	CXP41_RS23870	tRNA‑Leu
Reads supporting (aligned to +/- strand): ref base G (5/0); major base A (227/203); minor base T (13/4); total (246/209)
Fisher's exact test for biased strand distribution p-value = 8.04e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 455 total aligned reads displayed.

CCCACGTCCGTAAGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGTTTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACTAACACCTGAAGCTAGC  >  NZ_CP025268/4608019‑4608290

 ccACGTCCGTAAGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAacccg                                                                                                                                     >  1:11055778/1‑137 (MQ=255)

   aCGTCCGTAAGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTaa                                                                                                                                   <  1:1074242/140‑1 (MQ=255)

   aCGTCCGTAAGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTaa                                                                                                                                   <  2:4866237/140‑1 (MQ=255)

        cGTAAGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCAAAGACTTCTTACTTATATAGTAATCGGCTCGTTTAGTGCGAGTGGGGGGTGTTGAAGCCGTACGTACGTAAGAACTCTAAGACCt                                                                                                                              >  2:9237293/1‑140 (MQ=12)

               tcacTAACACCTGAAGCTATAGCGTATAAAAATTCCGCCACCTTCTCACATTCATCTTACTTTTTTTGATATCTCCTCTTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTa                                                                                                                       <  2:768313/139‑1 (MQ=21)

               acacTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCTTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTa                                                                                                                       >  1:1191380/1‑140 (MQ=255)

               acacTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTa                                                                                                                       >  1:5756962/1‑140 (MQ=255)

                cacTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAg                                                                                                                      >  1:553858/1‑140 (MQ=255)

                    aaCACCTGAAGCTAGCGCTTCTAACAATTCCGCCACCTTCTCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGcgcg                                                                                                                  <  2:6651168/140‑1 (MQ=255)

                    aaCACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGcgcg                                                                                                                  <  1:943949/140‑1 (MQ=255)

                        ccTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACACACATCTTACTTTTTTTGATATCGCCACGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGTAAACTAACACCTGAAGCTAGCGCGTCTa                                                                                                              >  1:4881753/1‑140 (MQ=25)

                             aGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTAGTTTTTTTGATTTCGACTCTTTTGGTGCGATGGGGGGGACTTGAACCCACACGTCCGTAAGTACAATAACACATGTAGCTAGAGCGTCTACCAAt                                                                                                         >  2:1599691/1‑140 (MQ=21)

                             aGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACTAACACCTGAAGCTAGCGCGTCTACCAAt                                                                                                         >  2:2898665/1‑140 (MQ=255)

                             aGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGTAGCTAGCGCGTCTACCAAt                                                                                                         >  1:7057965/1‑140 (MQ=255)

                             aGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAAt                                                                                                         >  2:6313170/1‑140 (MQ=255)

                             aGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAAt                                                                                                         >  1:5003993/1‑140 (MQ=255)

                             aGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGGCAGCTTACTTTTGTAGATATCGCCTCGTGTGGTGCGAGGGGGGGGACTTGACCCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCGACCact                                                                                                         >  2:10742550/1‑138 (MQ=21)

                               cTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTACGAACACTAACACCTGAAGAAAGCGCGTCTACCAATTc                                                                                                       >  2:6852989/1‑140 (MQ=255)

                                 aGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCTACTCGTTTGGTGCGAGGGGGGGGACTTGAACCACCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACACATTCCg                                                                                                     >  2:11322205/1‑140 (MQ=25)

                                 aGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCACTTCCg                                                                                                     >  1:6010821/1‑140 (MQ=255)

                                 aGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCg                                                                                                     >  1:3555141/1‑140 (MQ=255)

                                  gcgcGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGc                                                                                                    <  1:9989030/140‑1 (MQ=255)

                                  gcgcGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGc                                                                                                    <  1:2740937/140‑1 (MQ=255)

                                   cgcgTCTACCAAATACGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCACGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAAAACCTGAAGCTAGCGCGTCTACCAATTCCGcc                                                                                                   >  1:10645659/1‑140 (MQ=21)

                                       tCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTATTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAATAACAATAACACATGAAGCTAGCGCGTCTACCAATTCCGCCACCt                                                                                               >  2:7497809/1‑140 (MQ=21)

                                          aCCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCg                                                                                            <  1:3047253/140‑1 (MQ=255)

                                           cccaTTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAAGTCCGCCACCTTCGc                                                                                           <  2:4054943/137‑1 (MQ=255)

                                            cAATTCCGCCACCTTCGCACATTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGcc                                                                                          <  1:4339181/140‑1 (MQ=255)

                                            cAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGcc                                                                                          <  1:46046/140‑1 (MQ=255)

                                            cAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGcc                                                                                          <  1:3316745/140‑1 (MQ=255)

                                            cAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGcc                                                                                          <  1:3093489/140‑1 (MQ=255)

                                            cAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGcc                                                                                          <  1:7877600/140‑1 (MQ=255)

                                            cAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTAGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGcc                                                                                          <  2:3151836/140‑1 (MQ=255)

                                             aaTTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGccc                                                                                         <  1:11528266/140‑1 (MQ=255)

                                              aTTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCa                                                                                        <  2:7194581/140‑1 (MQ=255)

                                              aTTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCa                                                                                        <  2:9679753/140‑1 (MQ=255)

                                               ttCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGATTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAg                                                                                       >  2:5102026/1‑140 (MQ=255)

                                                tCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGcagaca                                                                                      >  1:6849720/1‑135 (MQ=255)

                                                tCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGt                                                                                      <  2:3446204/140‑1 (MQ=255)

                                                tCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGt                                                                                      <  2:1210889/140‑1 (MQ=255)

                                                tCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGt                                                                                      <  1:1671462/140‑1 (MQ=255)

                                                tCCGCCACCTTCGAACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGt                                                                                      <  2:2632284/140‑1 (MQ=255)

                                                  cGCCACCTTCGCAGAGGCATCTTACTTTTTTTGATCTCGCCTCGTGTGGTGCGAGGGGGGGGACTTGACCCCCCACGTCCGTAAGAACACTAACACCTGAAGCTCGCGCGGCTGCCAATGCCGCCGCCGTCGCCCAGTGc                                                                                    >  2:9029631/1‑140 (MQ=18)

                                                  cGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGc                                                                                    >  2:11011379/1‑140 (MQ=255)

                                                  cGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGAGc                                                                                    >  1:2205180/1‑140 (MQ=255)

                                                     cACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAg                                                                                 <  1:395853/140‑1 (MQ=255)

                                                     cACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAg                                                                                 <  2:4775818/140‑1 (MQ=255)

                                                     cACCTTCGCACAGTCATCTTACTTTTATTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAg                                                                                 <  1:6602869/140‑1 (MQ=255)

                                                     cACCTACGCACATTCATCGTACTATTGGTGATCTCGCCTCGTTTGGGGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGCAGCTAGCGCGTCTACCAATTCCGCCACCATCGCCCAGTGCGAg                                                                                 <  2:758206/140‑1 (MQ=17)

                                                       ccTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGAGCGAGCa                                                                               >  2:6157058/1‑140 (MQ=255)

                                                       ccTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTGCGCCCAGTGCGAGCa                                                                               >  2:3852186/1‑140 (MQ=255)

                                                        cTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCaa                                                                              <  1:7227601/140‑1 (MQ=255)

                                                                 gTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGt                                                                     >  1:1993195/1‑140 (MQ=255)

                                                                 gTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGAAATATCAACGt                                                                     >  2:5327316/1‑140 (MQ=255)

                                                                    aTCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCAAAGAGCGAGATATATAAACGAGGt                                                                  >  2:5921602/1‑140 (MQ=17)

                                                                     tCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCt                                                                                                                        >  2:5595148/1‑85 (MQ=255)

                                                                     tCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGtt                                                                 >  1:1376238/1‑140 (MQ=255)

                                                                      cTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGttt                                                                >  1:3835041/1‑140 (MQ=255)

                                                                       ttACTTTTTATGATATCTACTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGtttt                                                               <  2:2973745/140‑1 (MQ=255)

                                                                          cTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTaa                                                                                                                                   <  1:7667408/69‑1 (MQ=255)

                                                                          cTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGTTTTTgg                                                            >  2:3675311/1‑140 (MQ=255)

                                                                          cTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGTGTTTgg                                                            >  1:5434381/1‑140 (MQ=255)

                                                                          cTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGAGCGAGCACTATCAACGTGGTTTTTgg                                                            >  2:7923260/1‑140 (MQ=255)

                                                                          cTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCAACATAGAGAACTATCAAAGTGTTTTTTgg                                                            >  2:10485722/1‑140 (MQ=17)

                                                                           ttttttaGATCTCGCATCGTGTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGACGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGATTTTGGt                                                           <  2:8271203/140‑1 (MQ=18)

                                                                            ttttttGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGTTTTTGGTg                                                          >  2:2578087/1‑140 (MQ=255)

                                                                            ttttttGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGTTTTTGGTg                                                          >  1:612764/1‑140 (MQ=255)

                                                                            ttttttGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGAGCGAGCACTATCAACGTGGTTATAGGTg                                                          >  2:8207437/1‑140 (MQ=18)

                                                                               tttGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGAGCGAGCACTATCAACGTGGTTTTTGGTGCGa                                                       >  2:10613937/1‑140 (MQ=255)

                                                                               tttGATATCGACTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGTTTTTGGTGCGa                                                       <  2:243877/140‑1 (MQ=255)

                                                                                ttGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGAGAGAGCACTATCAACGTGGTTTTTGGTGCGAg                                                      >  2:7367282/1‑140 (MQ=255)

                                                                                     atCGCCTCGTTTGGTGCGAGGGGGGGGACTAGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGTTTTTGGTGCGAgggggg                                                 <  2:9840530/140‑1 (MQ=255)

                                                                                       ctccTCGTGTGGTGGGAGGGGGGGGACATGAACACCACATTCCGAAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGTTTTTGGTGCGAgggggggg                                               <  2:8720125/138‑1 (MQ=21)

                                                                                       cGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCAAGAGCGAGCAATATCAACGTGGTTTTTGGTGCGAgggggggg                                               >  2:11482151/1‑140 (MQ=255)

                                                                                             gTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATCTCAACGTGGTTTTTGGTGCGAGGGGGGGGACTTGa                                         >  1:10432997/1‑140 (MQ=255)

                                                                                              tttGGTGCGAGGGGGGGTACTTGAACCCCCACGTCCGTCAGAACACTACCACCTGAAGCTTCCGCGTATACCACTTCCGCCACCTTCGCCCATTGCGAGCAATAACAACGTGGTTTTTGGTGCGAGGGGGGGGACTTGaa                                        <  2:2189987/140‑1 (MQ=21)

                                                                                                   tGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCACTATCAACGTGGTTTTTGGTGCGAGGGGGGGGACTGGAAccccc                                   >  2:9491780/1‑140 (MQ=255)

                                                                                                    gtgtggggggggACTTTAACCCCCACGTCCGTAAGAACACTTACACCTGAAGCTAGCGCGTCTACCTATTCCTCCACCTTCGCCCATTGCGAGCAATATAAACGTGGTTTTTGGTGCGAGGGGGGGGACTTGAACCCCCa                                  <  1:2395681/136‑1 (MQ=21)

                                                                                                    gCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTACCACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGTTTTTGGTGCGAGGGGGGGGACTTGAACCCCCa                                  <  1:9664160/140‑1 (MQ=255)

                                                                                                      gAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGTTTTTGGTGCGAGGGGGGGGACTTGAACCCCCACg                                <  2:449131/140‑1 (MQ=255)

                                                                                                      gAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGTTTTTGGTGCGAGGGGGGGGACTTGAACCCCCACg                                <  1:2578178/140‑1 (MQ=255)

                                                                                                       aGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGTTTTTGGTGCGAGGGGGGGGACTTGAACCACCACGt                               >  1:11282707/1‑140 (MQ=255)

                                                                                                       aGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGTTTTTGGTGCGAGGGGGGGGACTTGAACACCCACGt                               >  2:8500318/1‑140 (MQ=255)

                                                                                                          ggggggACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTTGCGCGTCTACCTAGACCTACACCTTCGCACATTTCTAGCAATATCTACGTGGTTTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCg                            <  2:1924633/140‑1 (MQ=21)

                                                                                                           gggggACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTCGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGTTTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGt                           <  1:4067211/140‑1 (MQ=255)

                                                                                                           gggggACTTGAAACCCCACGTCCGTAAGAACACTACCACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGTTTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGt                           <  1:7469278/140‑1 (MQ=255)

                                                                                                             gggACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGcc                                                                                          <  1:9349888/75‑1 (MQ=14)

                                                                                                             gggACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCACTATCAACGTGGTTATTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGaaa                         >  2:1364553/1‑140 (MQ=255)

                                                                                                             gggACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGTTTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTaa                         >  1:10985380/1‑140 (MQ=255)

                                                                                                                    taaCCCCCACTTCCTTAAGTCCACTACCACATGAATCTTTCGCTTATACCAATACCTCCACATTCGCCCAGTGCTAGCAATATCAACTTGGTTATTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACt                  <  2:402563/139‑1 (MQ=18)

                                                                                                                    gAACCCCCACTTACGTAAGAACACTACCACCTGAATCTTCCTCTTCTACCCCTTCCGCCACATTCGCCCAGTGCGAGCAATATCAACTTGTTTTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACt                  <  1:8477912/140‑1 (MQ=21)

                                                                                                                    gAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGTTTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACt                  <  1:6344126/140‑1 (MQ=255)

                                                                                                                    gAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGTTTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACt                  >  1:9045658/1‑140 (MQ=255)

                                                                                                                    gAACCCCCACGTCCGTAAGAACACCAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCACTATCAACGTGGTTTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACt                  >  2:8066043/1‑140 (MQ=255)

                                                                                                                      aCCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGGGAGCAATTTAAACGTGGGTGGTGGTGCGAGGGGGGGGACTTGAACCCCCACGTGCGTAAGTACACTaa                >  2:3110708/1‑140 (MQ=21)

                                                                                                                          ccACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGTTTTTGGTGCGAGGGGGGGGACGTGAAACCCCACCTACGTAAGGAAACaaaaaac            >  1:10167183/1‑136 (MQ=25)

                                                                                                                            aCGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGTTTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACTAACACCTg          >  1:817519/1‑140 (MQ=255)

                                                                                                                               tCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGTTTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACTAACACCTGAAg       >  1:8751568/1‑140 (MQ=255)

                                                                                                                                  gTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGTTTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACTAACACCTGAAGCTa    >  1:5868752/1‑140 (MQ=255)

                                                                                                                                   tAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGAGGTTTTTGGTGCGAGGGGGGGGCCTTGACCCCCCACGACCGAAAGGACACTAACTCCTGAAGCTAg   >  1:11357309/1‑140 (MQ=37)

CCCACGTCCGTAAGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGTTTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACTAACACCTGAAGCTAGC  >  NZ_CP025268/4608019‑4608290

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`