| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 2,771,469 | (C)8→7 | intergenic (+91/‑265) | rnlB → / → yfjP | type II toxin‑antitoxin system antitoxin RnlB/GTPase family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 2,771,462 | 0 | C | . | 96.9% | 1026.8 / 21.7 | 230 | intergenic (+84/‑272) | rnlB/yfjP | type II toxin‑antitoxin system antitoxin RnlB/GTPase family protein |
| Reads supporting (aligned to +/- strand): ref base C (1/0); major base . (23/198); minor base T (7/0); total (32/198) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.52e-07 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 274 total aligned reads displayed.
AAGCCTCTGTTTTGTCTCCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAACCCCCCCCTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAATTTCCCCCCCTTTAAACTTCTCAATAATGTCACCAATTTTCTGGAAATCCTATGATGCCTTTCCCGGTAAATGGTG > NZ_CP025268/2771323‑2771597 | aGCCTCTGTTTTGTCTCCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAAcc < 1:10918355/140‑1 (MQ=255) tccTCTGTATAGTCTCCCGATGATGTACGCCAACTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAAccc < 2:5899169/139‑1 (MQ=255) gCCTCTGTTTTGTCTCCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAAccc < 1:10618797/140‑1 (MQ=255) gCCTCTGTTTTGTCTCCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAAccc < 2:1914232/140‑1 (MQ=255) gCCTCTGTTTAGTCTCCCGATGATGTACGCCAAGTCCTGTCAATGGATATTAGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGCTCAAATAGCATTAAccc < 2:775670/140‑1 (MQ=255) gCCCCTGTTTTGTCTCCCGATGATGTACGCCTAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATGAACTTGTCCAATATGATCAAATAGCATTAAccc < 2:9410398/140‑1 (MQ=255) ccTCTGTTTTGTCTCCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAAcccc < 2:10413504/140‑1 (MQ=255) ccTCTGTTTTGTCTCCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAAcccc < 1:2594365/140‑1 (MQ=255) ctctGTTTTGTCTCCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAAccccc < 2:5453767/140‑1 (MQ=255) ctctGTTTTGTCTCCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAAccccc < 2:10957141/140‑1 (MQ=255) ctGTTTTGTCTCCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAAccccccc < 1:9790044/140‑1 (MQ=255) ctGTTTTGTCTCCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAAccccccc < 1:8071876/140‑1 (MQ=255) ttttGTCTCCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAAccccccctca < 2:8774465/140‑4 (MQ=255) ttGTCTCCCTATGATGTTCGCCAAGTCCTGTCAATGGAATTTTGAAACTCTTCTTTCTAAACGAACCAGAATAGAAGTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAAcccccccacaca < 2:1734589/140‑6 (MQ=255) ttGTCTCCCGATGTTGTACGCCATGTCCTGTCAATGGATTTTTGAAAATCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTTACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTcaca < 2:1420334/140‑1 (MQ=255) ttGTCTCCCGATGCTGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTcaca < 2:7695289/140‑1 (MQ=255) ttGTCTCCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTcaca < 2:441846/140‑1 (MQ=255) ttGTCTCCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTcaca < 2:716976/140‑1 (MQ=255) ttGTCTCCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTcaca < 2:130360/140‑1 (MQ=255) ttGTCTCCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTcaca < 2:5678136/140‑1 (MQ=255) ttGTCTCCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTcaca < 1:513760/140‑1 (MQ=255) ttGTCTCCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTcaca < 2:1542676/140‑1 (MQ=255) ttGTCTCCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTcaca < 2:9116132/140‑1 (MQ=255) ttGTCTCCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTcaca < 1:1283209/140‑1 (MQ=255) ttGTCTCCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTcaca < 1:1181753/140‑1 (MQ=255) ttGTCTCCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTcaca < 2:9248896/140‑1 (MQ=255) ttGTCTCCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTcaca < 1:169570/140‑1 (MQ=255) ttGTCTCCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTcaca < 2:7758896/140‑1 (MQ=255) ttGTCTCCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTATTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTcaca < 2:3569408/140‑1 (MQ=255) ttGTCTCCCGATGATGTACGCCAAGTCCTGTCAATGGATTTATGAAACTCTTCTTTATAAACGAACCAGTATAGAATTCGCCCTTTTGGCTTGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTcaca < 2:8559572/140‑1 (MQ=255) gTCTCCCGATGCTGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAAc < 1:3255/140‑1 (MQ=255) tctcCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACg < 1:3722290/140‑1 (MQ=255) ctcCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGt < 2:740810/140‑1 (MQ=255) ctcCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGt < 2:111441/140‑1 (MQ=255) tcCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTTAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATATCATTAA‑CCCCCCCTCACAACGTc < 2:5337711/140‑1 (MQ=255) tcCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTc < 2:8471441/140‑1 (MQ=255) tcCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTc < 2:4493272/140‑1 (MQ=255) tcCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTc < 2:4966692/140‑1 (MQ=255) tcCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTc < 1:7278374/140‑1 (MQ=255) tcCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTc < 2:5628528/140‑1 (MQ=255) tcCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTc < 2:6585592/140‑1 (MQ=255) tcCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTc < 1:10523543/140‑1 (MQ=255) atgatgTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTCCTGCa < 1:3577999/140‑1 (MQ=255) atgatgTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTCCTGCa < 2:8173194/140‑1 (MQ=255) cGCCAAGTCCTGTCAATGGATTTTTGACACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTCCTGCATAGGGAac < 1:8675483/140‑1 (MQ=255) cGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACACCGTCCTGCATAGGGAac < 1:5868481/140‑1 (MQ=255) cGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTCCTGCATAGGGAac < 2:4620934/140‑1 (MQ=255) cGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTCCTGCATAGGGAac < 1:1460702/140‑1 (MQ=255) cGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTCCTGCATAGGGAac < 1:10087397/140‑1 (MQ=255) cGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTCCTGCATAGGGAac < 2:2063698/140‑1 (MQ=255) cGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTCCTGCATAGGGAac < 2:2558696/140‑1 (MQ=255) cGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTCCTGCATAGGGAac < 1:2310862/140‑1 (MQ=255) cGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTCCTGCATAGGGAac < 1:4432006/140‑1 (MQ=255) cGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTGTGGCATGATATTCACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACACCGTCCTGCATAGGGAac < 2:2615906/140‑1 (MQ=255) cGCCAAGTCCTGTCAATGGATTTTTGAAACTCGTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTCCTGCATAGGGAac < 2:8052778/140‑1 (MQ=255) cGCCAAGACCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTTGCATGATAATAACTTGTCCAATATTATCAAATAGCATTAA‑CCCCCCCTCACAACGTCCTGCATAGGGAac < 2:993465/140‑1 (MQ=255) ccAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTCCTGCATAGGGAacac < 2:4003656/140‑1 (MQ=255) aGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTCCTGCATAGGGAACACGtt < 1:11280646/140‑1 (MQ=255) tCCTGTCTATGTATTTTTTAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATTATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTCCTGCATAGGGAACACGtttt < 1:5183523/140‑1 (MQ=255) tGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTCCTGCTTAGGGAACACGTTTTccc < 2:5872192/140‑1 (MQ=255) tGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTCCTGCATAGGGAACACGTTTTccc < 1:10296339/140‑1 (MQ=255) tGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTCCTGCATAGGGAACACGTTTTccc < 1:7564970/140‑1 (MQ=255) tGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTCCTGCATAGGGAACACGTTTTccc < 1:908320/140‑1 (MQ=255) gTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTCCTGCATAGGGAACACGTTTTcccc < 1:6053263/140‑1 (MQ=255) gTCAATGGATTTTAGAAACTCGTCCTTCGAAACGCACCAGTATAGAATTCGCCCTATTGGCATGATATTACCTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCCCAACGTCCTGCATAGGGAACACGTTTTcccc < 2:8228145/140‑1 (MQ=255) aTGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTCCTGCATAGGGAACACGTTTTCCCCtgtg < 2:10203771/140‑1 (MQ=255) aTTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCAcc < 1:2769069/140‑1 (MQ=255) aTTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCAcc < 2:2155162/140‑1 (MQ=255) tGACACTCATCTTTCTAAACTACCCACTATCGAATTCGCCCATTAGGCATGATACTAACATGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTCCGGCAGAGGGAACACGTTTTCCCCTGTGCCCCCACGa < 2:6762373/140‑1 (MQ=255) gAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGAc < 1:9901385/140‑1 (MQ=255) tttctAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAATTTccc < 1:4338001/140‑1 (MQ=255) tttctAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAATTTccc < 1:7241419/140‑1 (MQ=255) cttcgAAACGAACCAGTATAGCCTACGCCCTTATGGCAGGATACTAACTGGTCCAATATGACCAAATAGCATTAA‑CCCCCCCTCCCACCGTCCGGCAAAGGGAACACGTTGGCCCCTGTCCACCCACGACTAACTTTccc < 2:4209992/139‑1 (MQ=255) cGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAATTTCCCCCCCTTTa < 1:3712423/140‑1 (MQ=255) cGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAATTTCCCCCCCTTTa < 1:4040322/140‑1 (MQ=255) cGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAATTTCCCCCCCTTTa < 1:4642380/140‑1 (MQ=255) cGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAATTTCCCCCCCTTTa < 1:1000927/140‑1 (MQ=255) cGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAATTTCCCCCCCTTTa < 1:6458953/140‑1 (MQ=255) cGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAATTTCCCCCCCTTTa < 1:9484554/140‑1 (MQ=255) gCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAAccc < 1:4779742/52‑1 (MQ=255) gCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAAcc < 2:1024556/51‑1 (MQ=255) cccTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAATTTCCCCCCCTTTAAACTTCTCAATAATGTCAc < 1:5646316/140‑1 (MQ=255) tttGGCATGATATTAACTTGTCCAATATGATCAAATAGCATT‑GTGCGGCGCTCACTGGGTGGTGGATTGGGAACACGTGTTCCACTGTGCACCCCCGACTCGATGTCCCACCCTTTTAGCTTGTCTCTACTGTCAcatcg > 2:3234724/1‑136 (MQ=255) cATGATATTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAATTTCCCCCCCTTTAAACTTCTCAATAATGTCACCAATTTTCt < 1:9401637/140‑1 (MQ=255) ttatatTAACTTGTACAATATGATCAAATAGCATGTA‑ACACCCATCAATACGTACTGCATAGGGAACACGTTTTCCCCTTTGCAAAGAAGACTATATTTCCCCCCCGATAAATTTCTCAATAATCTCTCCAATTTTCTgg < 2:3014557/138‑1 (MQ=255) tatTAACTTGTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAATTTCCCCCCCTTTAAACTTCTCAATAATGTCACCAATTTTCTGGaaa < 1:2992799/140‑1 (MQ=255) gTCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTc > 1:1529986/1‑42 (MQ=255) tCCAATATGATCAAATAGCCTT‑AGCCCCCCCTCCCTACGTCGTGCCTAGGGAAGACGTTTTCCCCTGTGCACCCACGTCTAAATATCCCCCCCTTTAAACTGCTCCTGACTGTCACCAGTTGTGTGGTAGTGCTatgttg > 2:10709249/1‑140 (MQ=255) tCCAATATGATCAAATAGCATTGA‑GCGCCCCTCTCATCGTCCTGCTTAGGGACCACGTGTTGCCCTGTGCACCCAGGACTCAGTTTCCCCCCCTGTAATGTTCGCACTCATGGCTCCAATTTTCTGGACTTGCTaggatg > 2:6302345/1‑140 (MQ=255) tCCAATATGATCAAATAGCATTAA‑CCCCCCCTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAATTTCCCCCCCTTTAAACTTCTCAATAATGTCACCAATTTTCTGGAAATCCTatgatg < 1:2032662/140‑1 (MQ=255) tCCAATATGATCAAATAGCATT‑ATCCCACCCTCACAACGTCCTGCATAGGGAACAGGTTTTCCCGTGTGCACCCACGACTAAATTTCCCCCCCTGTAAACTTCTCAATAAGGTCACCACTGTTATGGAAATCCTctgatg > 2:7247495/1‑140 (MQ=255) tCCAATATGATCAAATAGCAATTA‑CCCGCCGTCACAACGTGCTGCATAGGGAAGACGTTGTCCCTTGTGAACCGCCGACTACATTTGCGCCCCTTTAATGTTCTCTGTTATGTCACGAGTGTTCTGGACTTCCGatgagg > 2:6090918/1‑138 (MQ=255) cAATATGATCAAATAGCATT‑ATCCCCCCCTCACAACGTCCTGCCTCGGGACCTCGTTTTCCCCTGTGCACCCACGACTACTTTTCGCCCCCGTTGATCTTCTGTATAGTGGCTGCTATGTTCTGGAAATCCTATGATGcg > 2:6927745/1‑139 (MQ=255) tCAAATAGCATTAA‑CCCCCCCGCACCACGTCCTGCCTAGGGAACCCGTTTTCCCCGGTGCACCCACGACTAAATTGCCCCCCCTTTACACTGCTCACTACTGTCACCATTTGTCTGGAGATCATATGATGCCTTTCCCgg > 2:10893541/1‑140 (MQ=255) tCAAATAGCATTAA‑CCCCCCCGCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAATTTCCCCCCCTTTAAACTTCTCAATAATGTCACCAATTTTCTGGAAATCCTATGATGCCTTTCGCgg > 2:3617137/1‑140 (MQ=255) aTAGCATTAA‑CCCCCCCTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGGGCACCCACGACTAAATTTCCCCCCCTTTAAACTTCTCAATAATGTCACCAATTTTCTGGAAATCCTATGATGCCTTTCCCGGTaaa < 1:8365415/140‑1 (MQ=255) aGCATTAA‑CCCCCCCTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAATTTCCCCCCCTTTAAACTTCTCAATAATGTCACCAATTTTCTGGAAATCCTATGATGCCTTTCCCGGTAAATg < 1:8451885/140‑1 (MQ=255) gCATTAA‑CCCCCCCTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAATTTCCCCCCCTTTAAACTTCTCAATAATGTCACCAATTTTCTGGAAATCCTATGATGCCTTTCCCGGTAAATgg < 1:5909718/140‑1 (MQ=255) gCATTAA‑CCCCCCCTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAATGTCCGCCCCTTTAAACTGCGCAATAATGTCGCCAAGTGTCTGGACTTCCTATGATGCGTGTCCCGGTCAGTgg > 2:2407383/1‑140 (MQ=255) cATTAA‑CCCCCCCTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAATTTCCCCCCCTTTAAACTTCTCAATAATGTCACCAATTTTCTGGAAATCCTATGATGCCTTTCCCGGTAAATGGt < 1:7796611/140‑1 (MQ=255) | AAGCCTCTGTTTTGTCTCCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGAAACTCTTCTTTCTAAACGAACCAGTATAGAATTCGCCCTTTTGGCATGATATTAACTTGTCCAATATGATCAAATAGCATTAACCCCCCCCTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAATTTCCCCCCCTTTAAACTTCTCAATAATGTCACCAATTTTCTGGAAATCCTATGATGCCTTTCCCGGTAAATGGTG > NZ_CP025268/2771323‑2771597 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |