BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NZ_CP025268	1,224,095	+GA	coding (248/249 nt)	CXP41_RS06440 →	protein YmgC

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NZ_CP025268	1,224,094	1	.	A	98.5%	2948.7 / 26.3	778	coding (247/249 nt)	CXP41_RS06440	protein YmgC
Reads supporting (aligned to +/- strand): ref base . (11/1); new base A (349/415); total (362/416)
Fisher's exact test for biased strand distribution p-value = 1.90e-03
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*	NZ_CP025268	1,224,094	2	.	G	98.5%	2675.8 / 27.6	778	coding (247/249 nt)	CXP41_RS06440	protein YmgC
Reads supporting (aligned to +/- strand): ref base . (11/1); new base G (350/415); total (362/416)
Fisher's exact test for biased strand distribution p-value = 1.91e-03
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 828 total aligned reads displayed.

TCAGGCTTTACGCTTGCGTTTAAAAGATGAAACCAGTGTGATTCTTTCTGATCTCTATCTGCAAATATTGCAGTACATTGAAATGCATAAGACTACACTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTC‑‑T‑‑T‑‑AACTTGAGTAAGGTTTTAGAATAAACATCAGCTGTATCACCATGCTGATGCAAAGTGAGCATTTCAGGCGTTATGCTTTCTTATTATGTCCGCAATATCAGGTGTCAAGAATGGAGAGTTCTCGCTCTCCATTCTTGAC  >  NZ_CP025268/1223955‑1224233

||

 cAGGCTTTACGCTTGCGTTTAAAAGATGAAACCAGTGTGATTCTTTCTGATCTCTATCTGCAAATATTGCAGTACATTGAAATGCATAAGACTACACTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTC‑‑T‑‑T‑‑a                                                                                                                                            >  1:10436201/1‑140 (MQ=255)

 cAGGCTTTACGCTTGCGTTTAAAAGATGAAACCAGTGTGATTCTTTCTGATCTCTATCTGCAAATATTGCAGTACATTGAAATGCATAAGACTACACTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTC‑‑T‑‑T‑‑a                                                                                                                                            >  1:9179398/1‑140 (MQ=255)

  aGGCTTTACGCTTGCGTTTAAAAGATGAAACCAGTGTGATTCTTTCTGATCTCTATCTGCAAATATTGCAGTACATTGAAATGCATAAGACTACACTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTC‑‑T‑‑T‑‑ag                                                                                                                                           <  1:8331760/140‑2 (MQ=255)

    gCTTTACGCTTGCGTTTAAAAGATGAAACCAGTGTGATTCTTTCTGATCTCTATCTGCAAATATTGCAGTACATTGAAATGCATAAGACTACACTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTC‑‑T‑‑T‑‑agaa                                                                                                                                         >  2:1595284/1‑137 (MQ=255)

    gCTTTACGCTTGCGTTTAAAAGATGAAACCAGTGTGATTCTTTCTGATCTCTATCTGCAAATATTGCAGTACATTGAAATGCATAAGACTACACTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTC‑‑T‑‑T‑‑agaa                                                                                                                                         >  1:8647938/1‑137 (MQ=255)

    gCTTTACGCTTGCGTTTAAAAGATGAAACCAGTGTGATTCTTTCTGATCTCTATCTGCAAATATTGCAGTACATTGAAATGCATAAGACTACACTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTC‑‑T‑‑T‑‑agaa                                                                                                                                         >  1:7532660/1‑137 (MQ=255)

    gCTTTACGCTTGCGTTTAAAAGATGAAACCAGTGTGATTCTTTCTGATCTCTATCTGCAAATATTGCAGTACATTGAAATGCATAAGACTACACTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTC‑‑T‑‑T‑‑agaa                                                                                                                                         >  2:7614969/1‑137 (MQ=255)

     cTTTACGCTTGCGTTTAAAAGATGAAACCAGTGTGATTCTTTCTGATCTCTATCTGCAAATATTGCAGTACATTGAAATGCATAAGACTACACTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTC‑‑T‑‑T‑‑agaac                                                                                                                                        <  1:9435874/140‑5 (MQ=255)

     cTTTACGCTTGCGTTTAAAAGATGAAACCAGTGTGATTCTTTCTGATCTCTATCTGCAAATATTGCAGTACATTGAAATGCATAAGACTACACTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTC‑‑T‑‑T‑‑agaac                                                                                                                                        <  1:9020800/140‑5 (MQ=255)

      tttACGCTTGCGTTTAAAAGATGAAACCAGTGTGATTCTTTCTGATCTCTATCTGCAAATATTGCAGTACATTGAAATGCATAAGACTACACTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTC‑‑T‑‑T‑‑agaact                                                                                                                                       >  1:325124/1‑135 (MQ=255)

              tGCGTTTAAAAGATGAAACCAGTGTGATTCTTTCTGATCTCTATCTGCAAATATTTCAGTACATTGAAATGCATAAGACTACACTAACGGATATAATTATTAATGACAGGGAATCCGTGCTCTC‑‑TTAT‑‑AACTTGAGTAAg                                                                                                                                 >  2:8478560/1‑140 (MQ=255)

              tGCGTTTAAAAGATGAAACCAGTGTGATTCTTTCTGATCTCTATCTGCAAATATTGCAGTACATTGAAATGCATAAGACTACACTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTC‑‑T‑‑TAGAACTTGAGTa                                                                                                                                   >  1:1455622/1‑138 (MQ=255)

              tGCGTTTAAAAGATGAAACCAGTGTGATTCTTTCTGATCTCTATCTGCAAATATTGCAGTACATTGAAATGCATAAGACTACACTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTC‑‑T‑‑TAGAACTTGAGTAAg                                                                                                                                 >  2:5971746/1‑140 (MQ=255)

              tGCGTTTAAAAGATGAAACCAGTGTGATTCTTTCTGATCTCTATCTGCAAATATTGCAGTACATTGAAATGCATAAGACTACACTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTC‑‑T‑‑TAGAACTTGAGTAAg                                                                                                                                 >  2:4570799/1‑140 (MQ=255)

               gCGTTTAAAAGATGAAACCAGTGTGATTCTTTCTGATCTCTATCTGCAAATATTGCAGTACATTGAAATGCATAAGACTACACTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTC‑‑T‑‑TAGAACTTGAGTAAgg                                                                                                                                >  2:52931/1‑140 (MQ=255)

                cGTTTAAAAGATGAAACCAGTGTGATTCTTTCTGATCTCTATCTGCAAATATTGCAGTACATTGAAATGCATAAGACTACACTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTC‑‑T‑‑TAGAACTTGAGTAAGGt                                                                                                                               >  2:3919843/1‑140 (MQ=255)

                cGTTTAAAAGATGAAACCAGTGTGATTCTGTCTGATCTCAATCTGCAAATATTGCAGTACATTGAAATGCATAAGACTACACTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTCGGA‑‑G‑‑AACTTGAGTAAGGt                                                                                                                               >  1:4698706/1‑140 (MQ=255)

                  tttAAAAGATGAAACCAGTGTGATTCTTTCTGATCTCTATCTGCAAATATTGCAGTACATTGAAATGCATAAGACTACACTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTC‑‑T‑‑TAGAACTTGAGTAAGGttt                                                                                                                             <  2:8274321/140‑1 (MQ=255)

                  tttAAAAGATGAAACCAGTGTGATTCTTTCTGATCTCTATCTGCAAATATTGCAGTACATTGAAATGCATAAGACTACACTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTC‑‑T‑‑TAGAACTTGAGTAAGGttt                                                                                                                             <  2:8781468/140‑1 (MQ=255)

                  tttAAAAGATGAAACCAGTGTGATTCTTTCTGATCTCTATCTGCAAATATTGCAGTACATTGAAATGCATAAGACTACACTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTC‑‑T‑‑TAGAACTTGAGTAAGGttt                                                                                                                             >  2:9332343/1‑140 (MQ=255)

                  tttAAAAGATGAAACCAGTGTGATTCTTTCTGATCTCTATCTGCAAATATTGCAGTACATTGAAATGCATAAGACTACACTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTC‑‑T‑‑TAGAACTTGAGTAAGGttt                                                                                                                             <  1:4870907/140‑1 (MQ=255)

                            gAAACCAGTGTGATTCTTTCTGATCTCTATCTGCAAATATTGCAGTACATTGAAATGCATAAGACTACACTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTC‑‑T‑‑TAGAACTTGAGTAAGGTTTTAGAATAAAc                                                                                                                   >  1:4257808/1‑140 (MQ=255)

                            gAAACCAGTGTGATTCTTTCTGATCTCTATCTGCAAATATTGCAGTACATTGAAATGCATAAGACTACACTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTC‑‑T‑‑TAGAACTTGAGTAAGGTTGTAGAATAAAc                                                                                                                   >  2:3527225/1‑140 (MQ=255)

                             aaaCCAGTGTGATTCTTTCTGATCTCTATCTGCAAATATTGCAGTACATTGAAATGCATAAGACTACACTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTC‑‑T‑‑TAGAACTTGAGTAAGGTTTTAGAATAAACa                                                                                                                  <  1:10046666/140‑1 (MQ=255)

                               aCCAGTGTGATTCTTTCTGATCTCTATCTGCAAATATTGCAGTACATTGAAATGCATAAGACTACACTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTC‑‑T‑‑TAGAACTTGAGTAAGGTTTTAGAATAAACATc                                                                                                                <  1:4476202/140‑1 (MQ=255)

                               aCCAGTGTGATTCTTTCTGATCTCTATCTGCAAATATTGCAGTACATTGAAATGCATAAGACTACACTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTC‑‑T‑‑TAGAACTTGAGTAAGGTTTTAGAATAAACATc                                                                                                                <  1:9858140/140‑1 (MQ=255)

                               aCCAGTGTGATTCTTTCTGATCTCTATCTGCAAATATTGCAGTACATTGAAATGCATAAGACTACACTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTC‑‑T‑‑TAGAACTTGAGTAAGGTTTTAGAATAAACATc                                                                                                                <  2:6499327/140‑1 (MQ=255)

                               aCCAGTGTGATTCTTTCTGATCTCTATCTGCAAATATTGCAGTACATTGAAATGCATAAGACTACACTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTC‑‑T‑‑TAGAACTTGAGTAAGGTTTTAGAATAAACATc                                                                                                                <  1:1638034/140‑1 (MQ=255)

                               aCCAGTGTGATTCTTTCTGATCTCTATCTGCAAATATTGCAGTACATTGAAATGCATAAGACTACACTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTC‑‑T‑‑TAGAACTTGAGTAAGGTTTTAGAATAAACATc                                                                                                                <  1:8803489/140‑1 (MQ=255)

                               aCCAGTGTGATTCTTTCTGATCTCTATCTGCAAATATTGCAGTACATTGAAATGCATAAGACTACACTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTC‑‑T‑‑TAGAACTTGAGTAAGGTTTTAGAATAAACATc                                                                                                                <  2:7965095/140‑1 (MQ=255)

                               aCCAGTGTGATTCTTTCTGATCTCTATCTGCAAATATTGCAGTACATTGAAATGCATAAGACTACACTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTC‑‑T‑‑TAGAACTTGAGTAAGGTTTTAGAATAAACATc                                                                                                                <  2:3069581/140‑1 (MQ=255)

                               aCCAGTGTGATTCTTTCTGATCTCTATCTGCAAATATTGCAGTACATTGAAATGCATAAGACTACACTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTC‑‑T‑‑TAGAACTTGAGTAAGGTTTTAGAATAAACATc                                                                                                                <  1:2375276/140‑1 (MQ=255)

                                 cAGTGTGATTCTTTCTGATCTCTATCTGCAAATATTGCAGTACATTGAAATGCATAAGACTACACTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTC‑‑T‑‑TAGAACTTGAGTAAGGTTTTAGAATAAACATCAg                                                                                                              <  2:2050606/140‑1 (MQ=255)

                                 cAGTGTGATTCTTTCTGATCTCTATCTGCAAATATTGCAGTACATTGAAATGCATAAGACTACACTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTC‑‑T‑‑TAGAACTTGAGTAAGGTTTTAGAATAAACATCAg                                                                                                              <  2:1442996/140‑1 (MQ=255)

                                 cAGTGTGATTCTTTCTGATCTCTATCTGCAAATATTGCAGTACATTGAAATGCATAAGACTACACTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTC‑‑T‑‑TAGAACTTGAGTAAGGTTTTAGAATAAACATCAg                                                                                                              <  2:7277632/140‑1 (MQ=255)

                                 cAGTGTGATTCTTTCTGATCTCTATCTGCAAATATTGCAGTACATTGAAATGCATAAGACTACACTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTC‑‑T‑‑TAGAACTTGAGTAAGGTTTTAGAATAAACATCAg                                                                                                              <  2:684032/140‑1 (MQ=255)

                                  aGTGTGATTCTTTCTGATCTCTATCTGCAAATATTGCAGTACATTGAAATGCATAAGACTACACTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTC‑‑T‑‑TAGAACTTGAGTAAGGTTTTAGAATAAACATCAGc                                                                                                             <  1:2536174/140‑1 (MQ=255)

                                    tgtgATTCTTTCTGATCTCTATCTGCAAATATTGCAGTACATTGAAATGCATAAGACTACACTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTC‑‑T‑‑TAGAACTTGAGTAAGGTTTTAGAATAAACATCAGCTg                                                                                                           <  1:9330780/140‑1 (MQ=255)

                                    tgtgATTCTTTCTGATCTCTATCTGCAAATATTGCAGTACATTGAAATGCATAAGACTACACTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTC‑‑T‑‑TAGAACTTGAGTAAGGTTTTAGAATAAACATCAGCTg                                                                                                           >  2:1270472/1‑140 (MQ=255)

                                    tgtgATTCTTTCTGATCTCTATCTGCAAATATTGCAGTACATTGAAATGCATAAGACTACACTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTC‑‑T‑‑TAGAACTTGAGTAAGGTTTTAGAATAAACATCAGCTg                                                                                                           <  2:10917319/140‑1 (MQ=255)

                                    tgtgATTCTTTCTGATCTCTATCTGCAAATATTGCAGTACATTGAAATGCATAAGACTACACTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTC‑‑T‑‑TAGAACTTGAGTAAGGTTTTAGAATAAACATCAGCTg                                                                                                           <  2:5005544/140‑1 (MQ=255)

                                    tgtgATTCTTTCTGATCTCTATCTGCAAATATTGCAGTACATTGAAATGCATAAGACTACACTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTC‑‑T‑‑TAGAACTTGAGTAAGGTTTTAGAATAAACATCAGCTg                                                                                                           <  1:10280067/140‑1 (MQ=255)

                                    tgtgATTCTTTCTGATCTCTATCTGCAAATATTGCAGTACATTGAAATGCATAAGACTACACTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTC‑‑T‑‑TAGAACTTGAGTAAGGTTTTAGAATAAACATCAGCTg                                                                                                           <  2:7121327/140‑1 (MQ=255)

                                        aTTCTTTCTGATCTCTATCTGCAAATATTGCAGTACATTGAAATGCATAAGACTACACTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTC‑‑T‑‑TAGAACTTGAGTAAGGTTTTAGAATAAACATCAGCTGTATc                                                                                                       >  1:5114860/1‑140 (MQ=255)

                                         ttctttctGATCTCTATCTGCAAATATTGCAGTACATTGAAATGCATAAGACTACACTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTC‑‑T‑‑TAGAACTTGAGTAAGGTTTTAGAATAAACa                                                                                                                  <  2:4937506/128‑1 (MQ=255)

                                              tctGATCTCTATCTGCAAATATTGCAGTACATTGAAATGCATAAGACTACACTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTC‑‑T‑‑TAGAACTTGAGTAAGGTTTTAGAATAAACATCAGCTGTATCACCATg                                                                                                 >  1:7357447/1‑140 (MQ=255)

                                              tctGATCTCTATCTGCAAATATTGCAGTACATTGAAATGCATAAGACTACACTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTC‑‑T‑‑TAGAACTTGAGTAAGGTTTTAGAATAAACATCAGCTGTATCACCATg                                                                                                 <  1:4040224/140‑1 (MQ=255)

                                                  aTCTCTATCTGCAAATATTGCAGTACATTGAAATGCATAAGACTACACTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTC‑‑T‑‑TAGAACTTGAGTAAGGTTTTAGAATAAACATCAGCTGTATCACCATGCTGa                                                                                             >  2:4281352/1‑140 (MQ=255)

                                                       tATCTGCAAATATTGCAGTACATTGAAATGCATAAGACTACACTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTC‑‑T‑‑TAGAACTTGAGTAAGGTTTTAGAATAAACATCAGCTGTATCACCATGCTGATGCaa                                                                                        <  2:1014012/140‑1 (MQ=255)

                                                       tATCTGCAAATATTGCAGTACATTGAAATGCATAAGACTACACTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTC‑‑T‑‑TAGAACTTGAGTAAGGTTTTAGAATAAACATCAGCTGTATCACCATGCTGATGCaa                                                                                        >  1:10711223/1‑140 (MQ=255)

                                                       tATCTGCAAATATTGCAGTACATTGAAATGCATAAGACTACACTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTC‑‑T‑‑TAGAACTTGAGTAAGGTTTTAGAATAAACATCAGCTGTATCACCATGCTGATGCaa                                                                                        <  2:10396763/140‑1 (MQ=255)

                                                       tATCTGCAAATATTGCAGTACATTGAAATGCATAAGACTACACTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTC‑‑T‑‑TAGAACTTGAGTAAGGTTTTAGAATAAACATCAGCTGTATCACCATGCTGATGCaa                                                                                        >  1:9647548/1‑140 (MQ=255)

                                                               aaTATTGCAGTACATTGAAATGCATAAGACTACACTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTC‑‑T‑‑TAGAACTTGAGTAAGGTTTTAGAATAAACATCAg                                                                                                              >  1:8096516/1‑110 (MQ=255)

                                                                   ttGCAGTACATTGAAATGCATCAGACTACACTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTC‑‑T‑‑TAGAACTTGAGTAAGGTTTTAGAATAAACATCAGCTGTATCACCATGCTGATGCAAGGTGAGCATTTc                                                                            >  2:2178396/1‑140 (MQ=255)

                                                                   ttGCAGTACATTGAAATGCATAAGACTACACTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTC‑‑T‑‑TAGAACTTGAGTAAGGTTTTAGAATAAACATCAGCTGTATCACCATGCTGATGCAAAGTGAGCATTTc                                                                            >  1:5507138/1‑140 (MQ=255)

                                                                           cATTGAAATGCATAAGACTACACTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTC‑‑T‑‑TAGAACTTGAGTAAGGTTTTAGAATAAACATCAGCTGTATCACCATGCTGATGCAAAGTGAGCATTTCAGGCGTTa                                                                    >  1:1880488/1‑140 (MQ=255)

                                                                           cATTGAAATGCATAAGACTACACTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTC‑‑T‑‑TAGAACTTGAGTAAGGTTTTAGAATAAACATCAGCTGTATCACCATGCTGATGCAAAGTGAGCATTTCAGGCGGTa                                                                    >  1:7762842/1‑140 (MQ=255)

                                                                             ttGATATGCATAAGACTACACTAACGGATATCATTATTAATGACAGTGACTCGGTGCTCTC‑‑A‑‑TAGAACTTGATTATGGTTTTAGAATAAACATCAGCTGTATCACCATGCTGATGCAAAGTGAGCATTTCAGGCTTTATg                                                                  <  2:8875474/140‑1 (MQ=255)

                                                                             ttGAAATGCATAAGACTACACTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTC‑‑T‑‑TAGAACTTGAGTAAGGTTTTAGAATAAACATCAGCTGTATCACCATGCTGATGCAAAGTGAGCATTTCAGGCGTTATg                                                                  <  1:2788249/140‑1 (MQ=255)

                                                                              tGAAATGCATAAGACTACACTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTC‑‑T‑‑TAGAACTTGAGTAAGGTTTTAGaa                                                                                                                        <  2:10594324/85‑1 (MQ=255)

                                                                              tGAAATGCATAAGACTACACTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTC‑‑T‑‑TAGAACTTGAGTAAGGTTTTAGAATAAACATCAGCTGTATCACCATGCTGATGCAAAGTGAGCATTTCAGGCGTTATGc                                                                 >  2:3370596/1‑140 (MQ=255)

                                                                               gAAATGCATAAGACTACACTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTC‑‑T‑‑TAGAACTTGAGTAAGGTTTTAGAATAAACATCAGCTGTATCACCATGCTGATGCAAAGTGAGCATTTCAGGCGTTATGCt                                                                <  2:10035876/140‑1 (MQ=255)

                                                                               gAAATGCATAAGACTACACTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTC‑‑T‑‑TAGAACTTGAGTAAGGTTTTAGAATAAACATCAGCTGTATCACCATGCTGATGCAAAGTGAGCATTTCAGGCGTTATGCt                                                                <  1:11200828/140‑1 (MQ=255)

                                                                               gAAATGCATAAGACTACACTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTC‑‑T‑‑TAGAACTTGAGTAAGGTTTTAGAATAAACATCAGCTGTATCACCATGCTGATGCAAAGTGAGCATTTCAGGCGTTATGCt                                                                <  1:5631463/140‑1 (MQ=255)

                                                                                aaaTGCATAAGACTACACTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTC‑‑T‑‑TAGAACTTGAGTAAGGTTTTAGAATAAACATCAGCTGTATCACCATGCTGATGCAAAGTGAGCATTTCAGGCGTTATGCtt                                                               <  2:5524539/140‑1 (MQ=255)

                                                                                   tGCATAAGACTACACTAACGGATATCATTATTAATGACAGGGACTCCGTGCTCTC‑‑T‑‑TAGAAATTGAGTAAGGTTTTAGAATAAACATCAGCTGTATCACCATGCTGATGCAAAGTGAGCATTTCAGGCGTTATGCTTTCt                                                            >  1:5293442/1‑140 (MQ=255)

                                                                                     cATAAGACTACACTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTC‑‑T‑‑TAGAACTTGAGTAAGGTTTTAGAATAAACATCAGCTGTATCACCATGCTGATGCACAGTGAGCATTTCAGGCGGTATGCTTTCtta                                                          >  1:1097258/1‑140 (MQ=255)

                                                                                        aaGACTACACTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTC‑‑T‑‑TAGAACTTGAGTAAGGTTTTAGAATAAACATCAGCTGTATCACCATGCTGATGCAAAGTGAGCATTTCAGGCGTTATGCTTTCttatta                                                       >  1:849874/1‑140 (MQ=255)

                                                                                            cTACACTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTC‑‑T‑‑TAGAACTTGAGTAAGGTTTTAGAATAAACATCAGCTGTATCACCATGCTGATGCAAAGTGAGCATTTCAGGCGTTATGCTTTCTTATTATGTc                                                   <  2:9522549/140‑1 (MQ=255)

                                                                                             tACACTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTC‑‑T‑‑TAGAACTTGAGTAAGGTTTTAGAATAAACATCAGCTGTATCACCATGCTGATGCAAAGTGAGCATTTCAGGCGTTATGCTTTCTTATTATGTcc                                                  <  2:1676535/140‑1 (MQ=255)

                                                                                               cacTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTC‑‑T‑‑TAGAACTTGAGTAAGGTTTTAGAATAAACATCAGCTGTATCACCATGCTGATGCAAAGTGAGCATTTCAGGCGTTATg                                                                  <  1:3477311/122‑1 (MQ=255)

                                                                                               cacTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTC‑‑T‑‑TAGAACTTGAGTAAGGTTTTAGAATAAACATCAGCTGTATCACCATGCTGATGCAAAGTGAGCATTTCAGGCGTTATGCTTTCTTATTATGTCCGc                                                <  2:473711/140‑1 (MQ=255)

                                                                                               cacTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTC‑‑T‑‑TAGAACTTGAGTAAGGTTTTAGAATAAACATCAGCTGTATCACCATGCTGATGCAAAGTGAGCATTTCAGGCGTTATGCTTTCTTATTATGTCCGc                                                >  1:5818132/1‑140 (MQ=255)

                                                                                                    aCGGTTATCATTATTACTGCCAGGGCATCCGTGCTATC‑‑T‑‑TAGAACTAGAGGATGGGTTTAGAGTAAACATCAGCTGGCTCACCATGCTGATGCAAAGTGAGCATTGCAGGCGGTAGGCTGTCTTATTATGTCCGCCatat                                           >  2:6148614/1‑140 (MQ=255)

                                                                                                    aCGGATATCATTATTAATGACAGGGAATCCGTGCTCTC‑‑T‑‑TAGAACTTGAGTAAGGTTTTAGAATAAACATCAGCTGTATCACCATGCTGATGCAAAGTGAGCATTTCAGGCGTTATGCTTTCTTATTATGTCCGCAatat                                           >  1:6897074/1‑140 (MQ=255)

                                                                                                    aCGGATATCATTATTAATGACAGGGAATCCGTGCTCTC‑‑T‑‑TAGAACTTGAGTAAGGTTTTAGAATAAACATCAGCTGTATCACCATGCTGATGCAAAGTGAGCATTTCAGGCGTTATGCTTTCTTATTATGTCCGCAatat                                           >  2:2680421/1‑140 (MQ=255)

                                                                                                     cGGATATCATTATTAATGACAGGGAATCCGTGCTCTC‑‑T‑‑TAGAACTTGAGTAAGGTTTTAGAATAAACATCAGCTGTATCACCATGCTGATGCAAAGTGAGCATTTCAGGCGTTATGCTTTCTTATTATGTCCGCAATATc                                          >  1:2214190/1‑140 (MQ=255)

                                                                                                      ggATATCATTATTAATGACAGGGAATCCGTGCTCTC‑‑T‑‑TAGAACTTGAGTAAGGTTTTAGAATAAACATCAGCTGTATCACCATGCTGATGCAAAGTGAGCATTTCAGGCGTTATGCTTTCTTATTATGTCCGCAATATCa                                         <  2:1873820/140‑1 (MQ=255)

                                                                                                       gATATCATTATTAATGACAGGGAATCCGTGCTCTC‑‑T‑‑TAGAACTTGAGTAAGGTTTTAGAATAAACATCAGCTGTATCACCATGCTGATGCAAAGTGAGCATTTCAGGCGTTATGCTTTCTTATTATGTCCGCAATATCAg                                        >  2:237789/1‑140 (MQ=255)

                                                                                                         tatCATTATTAATGACAGGGAATCCGTGCTCTC‑‑T‑‑TAGAACTTGAGTAAGGTTTTAGAATAAACATCAGCTGTATCACCATGCTGATGCAAAGTGAGCATTTCAGGCGTTATGCTTTCTTATTATGTCCGCAATATCAGgt                                      >  1:1144747/1‑140 (MQ=255)

                                                                                                         tatCATTATTAATGACAGGGAATCCGTGCTCTC‑‑T‑‑TAGAACTTGAGTAAGGTTTTAGAATAAACATCAGCTGTATCACCATGCTGATGCAAAGTGAGCATTTCAGGCGTTATGCTTTCTTATTATGTCCGCAATATCAGgt                                      >  2:11033563/1‑140 (MQ=255)

                                                                                                          atCATTATTAATGACAGGGAATCCGTGCTCTC‑‑T‑‑TAGAACTTGAGTAAGGTTTTAGAATAAACATCAGCTGTATCACCATGCTGATGCAAAGTGAGCATTTCAGGCGTTATGCTTTCTTATTATGTCCGCAATATCAGgtg                                     >  1:499011/1‑140 (MQ=255)

                                                                                                          atCATTATTAATGACAGGGAATCCGTGCTCTC‑‑T‑‑TAGAACTTGAGTAAGGTTTTAGAATAAACATCAGCTGTATCACCATGCTGATGCAAAGTGAGCATTTCAGGCGTTATGCTTTCTTATTATGTCCGCAATATCAGgtg                                     >  1:1106216/1‑140 (MQ=255)

                                                                                                           tCATTATTAATGACAGGGAATCCGTGCTCTC‑‑T‑‑TAGAACTTGAGTAAGGTTTTAGAATAAACATCAGCTGTATCACCATGCTNATGCAAAGTGAGCCTTTCAGGCGTTATGCTTTCTTATTATGTCCGCAATNTCAGgtgt                                    <  1:6003427/140‑1 (MQ=255)

                                                                                                           tCATTATTAATGACAGGGAATCCGTGCTCTC‑‑T‑‑TAGAACTTGAGTAAGGTTTTAGAATAAACATCAGCTGTATCACCATGCTGATGCAAAGTGAGCATTTCAGGCGTTATGCTTTCTTATTATGTCCGCTATATCAGgtgt                                    <  1:71551/140‑1 (MQ=255)

                                                                                                            cATTATTAATGACAGGGAATCCGTGCTCTC‑‑T‑‑TAGAACTTGAGTAAGGTTTTAGAATAAACATCAGCTGTATCACCATGCTGATGCAAAGTGAGCATTTCAGGCGTTATGCTTTCTTATTATGTCCGCAATATCAGGTGTc                                   >  1:6694099/1‑140 (MQ=255)

                                                                                                            cATTATTAATGACAGGGAATCCGTGCTCTC‑‑T‑‑TAGAACTTGAGTAAGGTTTTAGAATAAACATCAGCTGTATCACCATGCTGATGCAAAGTGAGCATTTCAGGCGGTATGCTTTCTTATTATGTCCGCAATATCAGGTGTc                                   >  2:7481857/1‑140 (MQ=255)

                                                                                                              ttattaATGACAGGGAATCCGTGCTCTC‑‑T‑‑TAGAACTTGAGTAAGGTTTTAGAATAAACATCAGCTGTATCACCATGCTGATGCAAAGTGAGCATTTCAGGCGTTATGCTTTCTTATTATGTCCGCAATATCAGGTGTCaa                                 >  1:3048038/1‑140 (MQ=255)

                                                                                                              ttattaATGACAGGGAATCCGTGCTCTC‑‑T‑‑TAGAACTTGAGTAAGGTTTTAGAATAAACATCAGCTGTATCACCATGCTGATGCAAAGTGAGCATTTCAGGCGTTATGCTTGCTTATTATGTCCGCAATATCAGGTGTCaa                                 >  2:11159361/1‑140 (MQ=255)

                                                                                                                      gACAGGGAATCCGTGCTCTC‑‑T‑‑TAGAACTTGAGTAAGGTTTTAGAATAAACATCAGCTGTATCACCATGCTGATGCAAAGTGAGCATTTCAGGCGTTATGCTTTCTTATTATGTCCGCAATATCAGGTGTCAAGAATGgag                         >  2:2854922/1‑140 (MQ=255)

                                                                                                                      gACAGGGAATCCGTGCTCTC‑‑T‑‑TAGAACTTGAGTAAGGTTTTAGAATAAACATCAGCTGTATCACCATGCTGATGCAAAGTGAGCATTTCAGGCGTTATGCTTTCTTATTATGTCCGCAATATCAGGTGTCAAGAATGgag                         <  2:5799156/140‑1 (MQ=255)

                                                                                                                         aGGGAATCCGTGCTCTC‑‑T‑‑TAGAACTTGAGTAAGGTTTTAGAATAAACATc                                                                                                                <  2:9710216/50‑1 (MQ=255)

                                                                                                                           ggAATCCGTGCTCTC‑‑T‑‑TAGAACTTGAGTAAGGTTTTAGAATAAACATCAGCTGTATCACCATGCTGATGCAAAGTGAGCATTTCAGGCGTTATGCTTTCTTATTATGTCCGCAATATCAGGTGTCAAGAATGGAGAGTtc                    >  1:377461/1‑140 (MQ=255)

                                                                                                                           ggAATCCGTGCTCTC‑‑T‑‑TAGAACTTGAGTAAGGTTTTAGAATAAACATCAGCTGTATCACCATGCTGATGCAAAGTGAGCATTTCAGGCGTTATGCTTTCTTATTATGTCCGCAATATCAGGTGTCAAGAATGGAGAGTtc                    >  1:6339832/1‑140 (MQ=255)

                                                                                                                           ggAATCCGTGCTCTC‑‑T‑‑TAGAACTTGAGTAAGGTTTTAGAATAAACATCAGCTGTATCACCATGCTGATGCAAAGTGAGCATTTCAGGCGTTATGCTTTCTTATTATGTCCGCAATATCAGGTGTCAAGAATGGAGAGTtc                    >  2:4150100/1‑140 (MQ=255)

                                                                                                                            gAATCCGTGCTCTC‑‑T‑‑TAGAACTTGAGTAAGGTTTTAGAATAAACATCAGCTGTATCACCATGCTGATGCAAAGTGAGCATTTCAGGCGTTATGCTTTCTTATTATGTCCGCAATATCAGGTGTCAAGAATGGAGAGTtct                   <  2:8621725/140‑1 (MQ=255)

                                                                                                                             aaTCCGTGCTCTC‑‑T‑‑TAGAACTTGAGTAAGGTTTTAGAATAAACATCAGCTGTATCACCATGCTGATGCAAAGTGAGCATTTCAGGCGTTATGCTTTCTTATTATGTCCGCAATATCAGGTGTCAAGAATGGAGAGTtctc                  <  1:2055168/140‑1 (MQ=255)

                                                                                                                             aaTCCGTGCTCTC‑‑T‑‑TAGAACTTGAGTAAGGTTTTAGAATAAACATCAGCTGTATCACCATGCTGATGCAAAGTGAGCATTTCAGGCGTTATGCTTTCTTATTATGTCCGCAATATCAGGTGTCAAGAATGGAGAGTtctc                  <  2:6697423/140‑1 (MQ=255)

                                                                                                                              aTCCGTGCTCTC‑‑T‑‑TAGAACTTGAGTAAGGTTTTAGAATAAACATCAGCTGTATCACCATGCTGATGCAAAGTGAGCATTTCAGGCGTTATGCTTTCTTATTATGTCCGCAATATCAGGTGTCAAGAATGGAGAGTTCTCg                 <  2:4441877/140‑1 (MQ=255)

                                                                                                                                ccGTGCTCTC‑‑T‑‑TAGAACTTGAGTAAGGTTTTAGAATAAACATCAGCTGTATCACCATGCTGATGCAAAGTGAGCATTTCAGGCGTTATGCTTTCTTATTATGTCCGCAATATCAGGTGTCAAGAATGGAGAGTTCTCGct               <  2:9159881/140‑1 (MQ=255)

||

TCAGGCTTTACGCTTGCGTTTAAAAGATGAAACCAGTGTGATTCTTTCTGATCTCTATCTGCAAATATTGCAGTACATTGAAATGCATAAGACTACACTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTC‑‑T‑‑T‑‑AACTTGAGTAAGGTTTTAGAATAAACATCAGCTGTATCACCATGCTGATGCAAAGTGAGCATTTCAGGCGTTATGCTTTCTTATTATGTCCGCAATATCAGGTGTCAAGAATGGAGAGTTCTCGCTCTCCATTCTTGAC  >  NZ_CP025268/1223955‑1224233

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`