| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 1,374,862 | (T)8→9 | intergenic (+40/‑172) | pspE → / → ycjM | thiosulfate sulfurtransferase PspE/glucosylglycerate phosphorylase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 1,374,854 | 1 | . | T | 92.7% | 1498.2 / 116.9 | 524 | intergenic (+32/‑180) | pspE/ycjM | thiosulfate sulfurtransferase PspE/glucosylglycerate phosphorylase |
| Reads supporting (aligned to +/- strand): ref base . (18/19); new base T (238/231); total (256/268) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.65e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 554 total aligned reads displayed.
GACGCCAGTCAGGGCAAGCAAAAGAGATCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑G‑‑TTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTGACAGTTTATTTTCTGC > NZ_CP025268/1374716‑1374988 | cGCCAGTCAGGGCAAGCAAAAGAGATCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑G‑‑ttt > 2:4749419/1‑140 (MQ=255) aGTCAGGGCAAGCAAAAGAGATCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑G‑‑ttttttt < 1:3367588/140‑1 (MQ=255) ggCAAGCAAAAGAGATCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑G‑‑tttttttttctgt > 2:569325/1‑135 (MQ=255) gcaagcaaAAGAGATCCATAGGGAGATGGGATAGACCCACGTGGAGAACGCCGGTGGCCTGAAAGACATCGCACTGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GA‑TTTTTTTTCTGTc < 2:1614288/140‑1 (MQ=255) caagcaaAAGAGATCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TTTTTTTTCTGTca < 2:10284412/140‑1 (MQ=255) caagcaaAAGAGATCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAAAGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TTTTTTTTCTGTca < 1:2456360/140‑1 (MQ=255) aagcaaAAGAGATCCTTAGCTAGATGGGATATACCCACGTTGAGAACGCCGGTGGACTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TTTTTTTTCTGTcac < 2:2421152/140‑1 (MQ=255) aagcaaAAGAGATCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TTTTTTTTCTGTcac < 2:6453115/140‑1 (MQ=255) aagcaaAAGAGATCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TTTTTTTTCTGTcac < 2:8532005/140‑1 (MQ=255) aagcaaAAGAGATCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TTTTTTTTCTGTcac < 1:5642498/140‑1 (MQ=255) aagcaaAAGAGATCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TTTTTTTTCTGTcac < 1:11163129/140‑1 (MQ=255) aagcaaAAGAGATCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TTTTTTTTCTGTcac < 1:9748746/140‑1 (MQ=255) gcaaAAGAGATCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TTTTTTTTCTGTCacac > 2:2529778/1‑140 (MQ=255) gcaaAAGAGATCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TTTTTTTTCTGTCacac > 1:3145412/1‑140 (MQ=255) caaAAGAGATCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TTTTTTTTCTGTCAcccc > 1:6388089/1‑140 (MQ=255) caaAAGAGATCCTTAGCGAGATGGGATATACCCACGTGGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTAGGCGCC‑GT‑TTTTTTTTCTGTCACAcc < 2:4570047/140‑1 (MQ=255) aaaaGAGATCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TTTTTTTTCTGTCACACCt < 1:7354322/140‑1 (MQ=255) agagATCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TTTTTTTTCTGTCACACCTTAt > 2:5421867/1‑140 (MQ=255) agagATCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TTTTTTTTATGTCACACCatat > 1:10004699/1‑140 (MQ=255) gaTCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TTTTTTTTCTGTCACACCTTATTTa > 1:7930708/1‑140 (MQ=255) gaTCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TTTTTTTTCTGTCACACCTTATTTa < 1:1926654/140‑1 (MQ=255) tCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TTTTTTTTCTGTCACACCTTATTTACa < 1:3529655/140‑1 (MQ=255) tCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TTTTTTTTCTGTCACACCTTATTTACa < 2:11019413/140‑1 (MQ=255) tCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TTTTTTTTCTGTCACACCTTATTTACa < 2:4401190/140‑1 (MQ=255) tCCTTAGCGAGATGGGATATACCCACGTGGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTTTGCGCC‑GT‑TTTTTTTTCTGTCACACCTTATTTACa < 2:360181/140‑1 (MQ=255) tCCTTAGAGAGATGTGATATACCCACGTTGAGAACGCCGGTGGCCTGAAATACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TTTTTTTTCTGTCACACCTTATTTACa < 1:4478517/140‑1 (MQ=255) ccTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TTTTTTTTCTGTCACACCTTATTTACAt > 1:9913160/1‑140 (MQ=255) tAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TTTTTTTTCTGTCACACCTTATTTACATccc > 2:6890628/1‑140 (MQ=255) tAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TTTTTTTTCTGACACACCTTATTTACATccc > 1:8268762/1‑140 (MQ=255) aGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TTTTTTTTCTGTCACACCATATTTACATcacc > 1:6804466/1‑140 (MQ=255) gCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TTTTTTTTCTGTCACACCTTATTTACATCCCCa < 2:7567372/140‑1 (MQ=255) gCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TTTTTTTTCTGTCACACCTTATTTACATCCCCa > 2:8081629/1‑140 (MQ=255) gCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TTTTTTTTCTGTCACACCTTATTTACATCCCCa < 2:5243437/140‑1 (MQ=255) gaTGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TTTTTTTTCTGTCACACCTTATTTACATCCCCATAGa < 2:6398572/140‑1 (MQ=255) gaTGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TTTTTTTTCTGTCACACCTTATTTACATCCCCATAGa < 2:8640481/140‑1 (MQ=255) aTGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAATGGTTAAAAGAATTCACCATGATCGTCGCTTATGCGCC‑GT‑TTTTTTTTCTGTAACACCTTATTTAAATCCCAATAGat > 2:2362796/1‑140 (MQ=255) aTGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TTTTTTTTCTGTCACACCTTATTTa < 2:9687174/127‑1 (MQ=255) aTGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TTTTTTTTCTGTCACACCTTATTTACATCCCCATAGat > 1:11259204/1‑140 (MQ=255) aTGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TTTTTTTTCTGTCACACCATAATTACATCCCCATAGaa > 2:8468435/1‑139 (MQ=255) tGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TTTTTTTTCTGTcaca < 1:11005174/117‑1 (MQ=255) tataCCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TTTTTTTTCTGTCACACCGTATTTACATCCCCATAGattattgg > 2:630168/1‑138 (MQ=255) taCCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCg < 1:1468915/140‑1 (MQ=255) aCCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TTTTTTTTCTTTCACACCTTATTTACATCCCCAAAGATTATTTGCGt > 1:10768604/1‑140 (MQ=255) aCCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TTTTTTTTCTGTCTCACCTTATGTTCATACCCATAGATTATTTGCGt > 1:1731225/1‑140 (MQ=255) cACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAg < 1:9272652/140‑1 (MQ=255) aCGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TTTTTTTTCTGTcac > 1:6628009/1‑104 (MQ=255) cGTTGATAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAATGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCt < 2:10877487/140‑1 (MQ=255) cGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GTTTTTTTTTTCTGTCCCACCTTATTTACATCCCCAGAGATTATTTGCGTCAGc > 2:3966183/1‑140 (MQ=255) cGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCt > 1:2656641/1‑140 (MQ=255) cGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCt < 1:288127/140‑1 (MQ=255) cGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCt < 2:9332886/140‑1 (MQ=255) cGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCt > 2:7866452/1‑140 (MQ=255) cGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TTTTTTTTCTGTCACACCGTATTTTCATCCCCAGAGTGTATTTGCGTCCGcg > 1:7106765/1‑139 (MQ=255) gTTGCGAACGCCGGGGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTc < 1:497266/140‑1 (MQ=255) gTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TTTTTTTTAAGTAACACCATATTTACATACCCAAAGATTATTTTGGTCAGCta > 2:3135538/1‑139 (MQ=255) gagaACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTcaca > 2:952106/1‑140 (MQ=255) gagaACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TTTTTTTTCTGTCACACCGTATTTACATCCCCATAGATTATTTGCGGCAGCTcaca > 1:8555302/1‑140 (MQ=255) aaCGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAATGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAAt < 2:9106348/140‑1 (MQ=255) aaCGCCGGTGGCCTGAAAGACATCGCAATGCAGATGGTCATAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GA‑TTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAAt < 2:1049833/140‑1 (MQ=255) ggTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCtt > 2:1747601/1‑140 (MQ=255) tGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCGTATGCGCC‑GT‑TTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCtttt > 2:4190337/1‑140 (MQ=255) gCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TTTTTTTTCTGTCACACCTTATTTAAATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTc > 1:5860268/1‑140 (MQ=255) ccTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTcc < 1:4769520/140‑1 (MQ=255) ccTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTcc < 2:511075/140‑1 (MQ=255) cTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GTTTTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTcc < 2:10187689/140‑1 (MQ=255) tGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TTTTTTTTGTTTCACACCTTTTTGACATCCCCCTAGTTTGTTTGCGGCAGCTCACAAATACGCtttttacgg > 1:9413920/1‑136 (MQ=255) ctCGCAATGCCGAAGGTCAAAGGTTAACAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTaaaaa < 1:884722/139‑1 (MQ=255) aTCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTaaaaa > 2:376780/1‑140 (MQ=255) tCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TTTTTTTTGTGTGACACCTTTATTAAAAACCCAAAGATTATTTTCGTAAGCTCAAAAAAAAGCGTTTTACCAGGTaaaaaa > 1:2106055/1‑140 (MQ=255) cGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TTTTTTTTCTGTCACACATTATTTACAAACCCCTTGATTATTTTGGTCAACTAAAAAATACGATTTTTCCCATGTAAAAAAt > 1:7528354/1‑140 (MQ=255) cGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TTTTTTTTATGTCACACCATATTTAAAACACCATATATTATTTGCGTCAGCTAACAAAAAAACATTTTACCAGGTAAAAAAt > 1:8642498/1‑140 (MQ=255) cAATGCCGAAGGTCAAAGGTTATAAGTATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TTTTTTTTCTGTGACTCCTTATGTACATCCCCATAGATTATTTGCGTCAGCTCACAAATTCGCTTTTTACCTGGGaaatatggt > 2:11170386/1‑134 (MQ=255) cAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTACCTGGTAAAAAAtta > 2:329295/1‑138 (MQ=255) cagCCGAAGCTCAAACGTTAAAAGAATTCACCACGCGCGGCGCGAATGCGCCGG‑‑TATTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCGCACAACTACTATTTTGCCCGGGTAAAAAAGGAtt < 2:6813653/138‑1 (MQ=255) aaGGTCAAATGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAACTACGCTTTTTCCCTGGTAAAAAATGATTTCCTGc < 1:5118899/140‑1 (MQ=255) aaGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATGATTTCCTGc < 2:8933621/140‑1 (MQ=255) aaGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTAGGCGCC‑GT‑TTTTTTTTATGGGACACCTTATTTACAACCCCCAAGGTTATTTTCGGACGCGCACAAAAAAACTTTTTACCCGGGAAAAAATGAtttacggc > 1:7791461/1‑135 (MQ=255) atgTCAAAGGTTAAAAGAATTCTCCATGAGCGGCGCTTATGCGCC‑GT‑TTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATGATTTCCTGCg < 2:10771769/138‑1 (MQ=255) aGGTCAAAGGTTAAACGAATTCACCATGAGCGGCGCTTATGAGCC‑GT‑TTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATGATTTCCTGCg < 2:5973349/140‑1 (MQ=255) ggTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATGATTTCCTGCGt < 2:4941958/140‑1 (MQ=255) aaaTGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GTTTTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATGATTTCCTGCGTGAc < 2:7179242/140‑1 (MQ=255) aGGTTAAAAGAATTCCCCATGAGCGGCGCTTATGCGCC‑GT‑TTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATGATTTCCTGCGTGACTaa < 1:8375901/140‑1 (MQ=255) aGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATGATTTCCTGCGTGACTaa < 2:190468/140‑1 (MQ=255) aGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATGATTTCCTGCGTGACTaa < 1:7617765/140‑1 (MQ=255) gTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATGATTTCCTGCGTGACTaaaa < 2:8275940/140‑1 (MQ=255) gAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATGATTTCCTGCGTGACTAAAACCCTtgt < 2:7447779/140‑1 (MQ=255) ttCACCATGAGCGGCGCTTATGCGCC‑GT‑TTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCt > 2:2868765/1‑140 (MQ=255) ttCACCATGAGCGGCGCTTATGCGCC‑GT‑TTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCt < 2:3562550/140‑1 (MQ=255) ttCACCATGAGCGGCGCTTATGCGCC‑GT‑TTTTTTTTCTGTCACACCGTATTTACATCCCCATAGATTATTTTCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATGTTTTACTGCGTGTGTAAAACCCTtgtggt > 1:6205405/1‑138 (MQ=255) ttCACCATGAGCGGCGCTTATGCGCC‑GT‑TTTTTTTTAAGTCACACCATATTTACAAACCCAAAGAATATTTTCGGCAGCTCAAAAATACGCTTTTTACCTGGTAAAAAATGATTTACTTCGTGACTAAAAACCATTTGcg > 1:4214173/1‑139 (MQ=255) ccATGAGCGGCGCTTATGCGCC‑GT‑TTTTTTTTATTTAAAACCGTAATTAAAAACCCAAAGATTATTTTCGTCACCTCACAAAAAACCTTTTTACCAGGGAAAAAATTTTTTACATCGTTTCTAAAAACCAtgttgacaaa > 1:10161440/1‑133 (MQ=255) aTGAGCGGCGCTTATGCGCC‑GT‑TTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTg < 1:10432060/140‑1 (MQ=255) aTGAGCGGCGCTTATGCGCC‑GT‑TTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATGTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTg < 1:10275973/140‑1 (MQ=255) gagaGGCGCTTATGCGCC‑GT‑TTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTGAc < 2:1226035/140‑1 (MQ=255) gAGCGGCGCTTATGCGCC‑GT‑TTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTGAc < 2:6611891/140‑1 (MQ=255) gAGCGGCGCTTATGCGCC‑GT‑TTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTGAc < 1:376780/140‑1 (MQ=255) cgcTTATGCGCC‑GT‑TTTTTTTTATGTCACACCATATTTAAAAACCCAAAGATTATTTTCGTCAGCAAAAAAAAAAGCTTTTTACCAGGTAAAAAATTATTTACAGCGGTACTAAAAACCATGTGGTCAAATTAAAGTTTa > 1:4044538/1‑140 (MQ=255) tATGCGCC‑GA‑TTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTGACAGTTTAtttt < 2:11249281/140‑1 (MQ=255) gcgcC‑GT‑TTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTGACAGTTTATTTTCTg < 1:10556447/140‑1 (MQ=255) gcgcC‑GA‑TTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTGACAGTTTATTTTCTg < 2:2666330/140‑1 (MQ=255) | GACGCCAGTCAGGGCAAGCAAAAGAGATCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑G‑‑TTTTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTGACAGTTTATTTTCTGC > NZ_CP025268/1374716‑1374988 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |