| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 1,701,269 | +A | intergenic (‑380/+10) | uidA ← / ← uidR | beta‑glucuronidase/DNA‑binding transcriptional regulator UidR |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 1,701,265 | 1 | . | A | 92.0% | 2294.7 / 170.0 | 653 | intergenic (‑376/+14) | uidA/uidR | beta‑glucuronidase/DNA‑binding transcriptional regulator UidR |
| Reads supporting (aligned to +/- strand): ref base . (29/23); new base A (287/310); total (316/337) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.13e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 668 total aligned reads displayed.
AGCGTATTGGGAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCG‑A‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGTCAGATCCAGCAGTAAACG > NZ_CP025268/1701126‑1701401 | aGCGTATTGGGAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCccgccg > 1:1371809/1‑140 (MQ=255) ttGGGAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTGATCACCAGCCCGCCG‑a‑aa‑atg > 1:4115642/1‑138 (MQ=255) ggAACGATACACTCTCCGGACATATGGCTTCAGTGAATACTTTGGGGGGAATCCTCCGTAGCCGGGAAGGATAAGTTTTGCACAGAGAACTTACGAGATGAACCGCGGGCACAGTTATCACCAGCCCGCCGCA‑AA‑a‑gaca < 2:4843080/140‑3 (MQ=255) ggAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCG‑A‑Aa‑a‑‑agaga < 1:316908/140‑1 (MQ=255) gAACGATATACTCTCAGGACATTTGTCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCG‑A‑Aa‑a‑‑agagag < 2:6182740/140‑1 (MQ=255) aaCGATAAACTCTCATGACATATGGCTACAGTGAATCTGTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCG‑A‑AA‑a‑‑agagaga > 2:1909856/1‑140 (MQ=255) gATAAACTCTCATGACATATTGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGTGAAGGATAATTTTAACACATAGAAATTACGATATGAAACTCGGGCACAGTTATCACCAGCCCGCAGAA‑AA‑A‑GAGAGAGaa > 2:2274308/1‑140 (MQ=255) gATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGaa > 1:4524746/1‑140 (MQ=255) gATAAACTCTCATGACATATGGCTACAGTGAATATTGTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGaa > 1:6742982/1‑140 (MQ=255) aTAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAAt > 1:1881180/1‑140 (MQ=255) tctcATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCTGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGAt < 2:2814306/140‑1 (MQ=255) tctcATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGAt < 2:2575236/140‑1 (MQ=255) tctcATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGAt < 2:11307105/140‑1 (MQ=255) tctcATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGAt < 2:10253522/140‑1 (MQ=255) actcATGACATCTGGCTACAGTGAATATTTTGGGGGGAATCCTCCGCAGCCGGGAACGATAATTTTCGCACAGAGAAAGTACGATATGAACCGCGGGCACAGGTATCACCAGCCCGCCGAA‑AA‑A‑GAGCGAGCCTCAGGAt < 2:9043476/139‑1 (MQ=255) cATGACATATGGCTCCAGGGAATAGGTTGGGGGGAATTCTCAGAAGCCGGGCAGGAGACTTTTTGCACAGAGAAAGTACGATATGAAACGCGGGCACAGTTATCCCCAGCCCGCCGAA‑AA‑A‑GTGAGAGAATCAGGCTGCg > 2:317918/1‑140 (MQ=255) cATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCg > 1:5388517/1‑140 (MQ=255) tGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGTATCAGGATGCGGt < 1:9703992/140‑1 (MQ=255) tGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGt < 2:10915755/140‑1 (MQ=255) tatGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGa < 2:772601/140‑1 (MQ=255) tatGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGa < 1:9990344/140‑1 (MQ=255) tGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATa > 1:3687146/1‑140 (MQ=255) tGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATa > 1:11032862/1‑140 (MQ=255) gAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAatca > 1:5113514/1‑140 (MQ=255) aaTATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGACTCAGGATGCGGTTAAGATACCGCCAatcat > 2:5072243/1‑140 (MQ=255) aaTATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAatcat > 2:6528883/1‑140 (MQ=255) aaTATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAatcat > 2:5444930/1‑140 (MQ=255) aaTATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAatcat > 1:7800616/1‑140 (MQ=255) atatTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACTATATGAAACGCGGGCACAGTTATCACCAGCCCGCCG‑ATAA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAatcatc > 1:6960746/1‑140 (MQ=255) tatTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATcg < 2:6340486/140‑1 (MQ=255) tatTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATcg < 1:6500258/140‑1 (MQ=255) tttGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATcgcgc > 2:2133554/1‑140 (MQ=255) ttGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATcgcgcg > 1:8351116/1‑140 (MQ=255) ttGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATcgcgcg > 1:10480729/1‑140 (MQ=255) cgggggcAATTCTCCCCAGCCGGGAAGCATCAATATTGCCCAGAGAAATTACGATAGCACCCGCCCGCACAGTTATCACCACCCCGCCG‑A‑AACA‑GAGAGACAATCAGGATGCGGTTAAGATACCGCCAATCATcgcgcga < 2:4310023/139‑2 (MQ=255) ggggggAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTa > 2:10482482/1‑140 (MQ=255) ggggggAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTa > 1:578611/1‑140 (MQ=255) gggggAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTaa > 1:7588790/1‑140 (MQ=255) ggggAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAAt > 1:1731820/1‑140 (MQ=255) ggggAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAAt > 2:294603/1‑140 (MQ=255) ggggAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAAt > 2:1470841/1‑140 (MQ=255) ggggAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAAt > 1:9248259/1‑140 (MQ=255) ggAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATcc < 2:6871234/140‑1 (MQ=255) gAATTCTCCGAAGCCGGGAAGGAAAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACCGTTATCACCTGCCCGCCGAA‑AA‑A‑GAGAGATAATCAGGATGCGGTTAAGATACCGCCAATCTTCGCGCGTATTccc < 2:3927938/140‑1 (MQ=255) aaTTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCt > 1:10912127/1‑140 (MQ=255) gCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAacgac < 2:7577348/140‑1 (MQ=255) ggAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCtt > 2:4490057/1‑140 (MQ=255) ggAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCtt < 1:8947986/140‑1 (MQ=255) aaGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCa < 1:11200481/140‑1 (MQ=255) aaGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCa < 1:2938032/140‑1 (MQ=255) aaGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCa < 1:10009263/140‑1 (MQ=255) gATAATTTTTGCACAGAGAAATTACGATATGAAATGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCAcgc < 1:6045522/140‑1 (MQ=255) gATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCAcgc > 2:4102736/1‑140 (MQ=255) gATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCAcgc > 1:6653035/1‑140 (MQ=255) aaTTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCATGCGcc < 1:5701684/140‑1 (MQ=255) aaTTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGcc < 1:1521082/140‑1 (MQ=255) cacaGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GTGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTc < 2:1404092/140‑1 (MQ=255) cacaGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTc < 1:4432154/140‑1 (MQ=255) cacaGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTc > 1:4671990/1‑140 (MQ=255) cacaGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTc < 1:7148185/140‑1 (MQ=255) gagaAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCt > 2:8753191/1‑140 (MQ=255) agaAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCtt < 2:1645918/140‑1 (MQ=255) agaAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCtt < 2:3298053/140‑1 (MQ=255) ttACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGata < 1:1461481/140‑1 (MQ=255) ttACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGata < 2:739021/140‑1 (MQ=255) ttACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGata < 2:11028271/140‑1 (MQ=255) aCGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGAAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATc < 2:5585343/140‑1 (MQ=255) atatGAACCGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGc < 1:2639366/140‑1 (MQ=255) atatGAAACGCGGGCACAGTTCTCACCAGCCCGCCG‑A‑AA‑ATGAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGc > 2:4729316/1‑140 (MQ=255) atatGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGc < 2:4947932/140‑1 (MQ=255) atatGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGc > 1:10319749/1‑140 (MQ=255) atatGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGc < 1:1201135/140‑1 (MQ=255) atatGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGc < 1:2380154/140‑1 (MQ=255) atatGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGc > 1:3835490/1‑140 (MQ=255) atatGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGc < 2:8329991/140‑1 (MQ=255) atatGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAAACATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGc < 1:8722071/140‑1 (MQ=255) aaaCGCGGGCACAGGTATCACCAGCCCTCCG‑A‑AA‑ACGAGAGAGACTCAGGATGCGGTTTAGAGACCGCCAATCATCGCGCGGAATCCCTGAGCAAACGACGCTTCACGGGCCAGGTCTTCCGCTTCGATATCGGCCAGTa < 2:8097905/140‑1 (MQ=255) gcgGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACAcc < 2:7180814/140‑1 (MQ=255) cgGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCg < 1:3418660/140‑1 (MQ=255) cgGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCg < 2:527181/140‑1 (MQ=255) ggCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTa > 2:3529776/1‑140 (MQ=255) acaGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGt > 2:1265427/1‑140 (MQ=255) caGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGTc < 2:9832055/140‑1 (MQ=255) caGTTATCACCAGCCCGCCG‑A‑AACA‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGTc < 2:1827939/140‑1 (MQ=255) cACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGGTAAGATACCGGCAAGCATCGCGAGTCATCCCTGAGCAAACGCCGCTTCACGCGCCAGGTCTTCCGCTGCGAGATCGGCCAGTACACCGTCGGTCAGATccc > 2:6757770/1‑139 (MQ=255) aCCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGTCAGATCcag < 1:3923523/140‑1 (MQ=255) aCCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGTCAGATCcag < 1:6243101/140‑1 (MQ=255) aCCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGTCAGATCcag < 1:7280716/140‑1 (MQ=255) aGCCCGCCGAA‑AA‑A‑GAGAGATAATCAGGATGCGTTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCCAACGACTCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACGGTAGGTCAGATCaagcag > 2:10392946/1‑140 (MQ=255) aGCCCGCCGAA‑AA‑A‑GAGAGAGTATCAGGATGCGGTTACGATACCGCCAATCATCGCGCGTAATCCCGGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGTCAGATCcagcag > 2:9387871/1‑140 (MQ=255) aGCCCGCCGAA‑AA‑A‑GAGAGAGACTCAGGATGCGGTTAATATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGTCAGATCcagcag > 2:9555069/1‑140 (MQ=255) aGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGTCAGATCcagcag < 1:10629309/140‑1 (MQ=255) aGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGTCAGATCcagcag > 1:8066152/1‑140 (MQ=255) cccGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAATCGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGTCAGATCCAGCAGTa > 2:5852569/1‑140 (MQ=255) cccGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCTTAGGTCAGATCCAGCAGTa > 1:1921575/1‑140 (MQ=255) cccGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGTCAGATCCAGCAGTa > 1:4218087/1‑140 (MQ=255) cccGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGTCAGATCCAGCAGTa > 2:10636250/1‑140 (MQ=255) cccGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGTCAGATCCAGCAGTa > 1:220810/1‑140 (MQ=255) cccGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGTCAGATCCAGCAGTa > 2:6019077/1‑140 (MQ=255) cgccgaA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGTCAGATCCAGCAGTaaa > 2:3718273/1‑140 (MQ=255) | AGCGTATTGGGAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCG‑A‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGTCAGATCCAGCAGTAAACG > NZ_CP025268/1701126‑1701401 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |