| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 2,773,671 | (C)5→6 | intergenic (+161/‑55) | yfjQ → / → yfjR | DUF932 domain‑containing protein/WYL domain‑containing protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 2,773,666 | 1 | . | C | 93.3% | 2049.8 / 142.7 | 678 | intergenic (+156/‑60) | yfjQ/yfjR | DUF932 domain‑containing protein/WYL domain‑containing protein |
| Reads supporting (aligned to +/- strand): ref base . (32/13); new base C (401/229); total (434/244) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.39e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 754 total aligned reads displayed.
CGTTGTTAATATCGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCC‑G‑C‑C‑C‑CC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGT > NZ_CP025268/2773527‑2773800 | cGTTGTTAATATCGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCC‑g < 2:3649396/140‑1 (MQ=255) ttgttAATATCGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCC‑G‑c‑c < 1:9086279/140‑1 (MQ=255) gttAATATCGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCC‑G‑c‑c‑c‑c < 1:9854084/140‑1 (MQ=255) gttAATATCGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCC‑G‑c‑c‑c‑c < 2:4464586/140‑1 (MQ=255) ttAATATCGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCACTCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCC‑G‑c‑c‑c‑cc < 2:2479270/140‑1 (MQ=255) ttAATATCGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGTTTATAGCTTTGAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCC‑G‑c‑c‑c‑cc < 2:11174566/140‑1 (MQ=255) aaTATCGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTTCATCTGGCTTTTGCAGAAATAAATAATAGTTGCTGCGTTGTCCATACCCTGTCC‑g‑c‑c‑g‑ccgg > 2:1596056/1‑138 (MQ=37) atatCGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCC‑G‑c‑c‑c‑ccctc < 1:7283787/140‑4 (MQ=255) tatCGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCC‑G‑c‑c‑c‑ccctct < 1:889281/140‑5 (MQ=255) cGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTCTAGCTGTTCACCCCCGTTACATCTGGGTTGTGCAGTAATAAAAAATAGTGTCTGCGGTGTCCATACCCTGGCC‑G‑c‑c‑c‑ccctctgta > 1:1258171/1‑133 (MQ=37) gACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGGTATAGCTGTTAACCCCCGTTACATCTGGCTTTTGCTGAATTAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCC‑GCC‑C‑C‑CC‑TCTTTaaa > 1:2985809/1‑140 (MQ=25) acacCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTGATAGCTTTGATCCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGAGTTGTCCATACCCTGTCC‑GCC‑C‑C‑CC‑TCGTTAAAg > 2:9369420/1‑140 (MQ=25) caccTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCC‑GCC‑C‑C‑CC‑TCGTTAAAGTAAt > 1:3283691/1‑140 (MQ=255) caccTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCC‑G‑c‑c‑c‑c > 2:2978283/1‑125 (MQ=255) ccTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAATAATTAGTTTCTGCGTTGTCCATACCCTGTCC‑GCC‑C‑C‑CC‑TCTTTTTAGTAATcg > 2:10038845/1‑139 (MQ=37) cTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCC‑GCC‑C‑C‑CC‑TCTTTAAAGTAATcac < 1:641928/140‑1 (MQ=255) cATCGCTCTGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTGGTGCAGAAATAAAAATTAGTTTCTGCGTTGTCCCTACCCTGTCC‑GCC‑C‑C‑CC‑GATTTAAAGTTCTCACAGCAttt > 2:657149/1‑140 (MQ=255) cATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTCCATCTGGCTTTTGCAGCAATAATAAATAGTGTCTGCGTTGTCCATACCCTGTCC‑G‑C‑C‑C‑CCGTCTTTATAGTAATCACATCAttt > 1:4221853/1‑140 (MQ=255) cATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGGTTTTGCAGATATAAAAAATAGTTTCTGCGTTGTCCTTACCCTGTCC‑G‑CGC‑C‑CC‑TCTTTAATGTAGGCGCATGAttt > 1:7649450/1‑140 (MQ=255) cATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCTGGAATTAAAAATAGTTTCTGCGTTGTCCTTACCCTGTCC‑G‑C‑C‑CACC‑TCTGTAAAGTAATCACATCAttt > 2:405637/1‑140 (MQ=255) cATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATTAAAAGTAGTTTCTGCGTTGTCCATACCCTGTCC‑GCC‑C‑C‑CC‑TCTTTAAGGTCAGCACGTCAttt > 1:10196477/1‑140 (MQ=255) tCGCTATGTGCTCGTGTGCCTCAATCCCCCTGTTATAGCTTTTAACCCCCGTTTCATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCC‑GCC‑C‑C‑CC‑TCTTTAAAGTAATCACATCATTTtc < 1:11219619/140‑1 (MQ=255) tCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCC‑GCC‑C‑C‑CC‑TCTTTAAAGTAATCACATCATTTtc < 1:10050609/140‑1 (MQ=255) cGCTATGTGCTCGTGTGCCTCAATCCCCCGGGTATAGCTTTTCACCCCCGTTACATCTGGCTTTTGCAGAAATTACAGCTAGTTGCTGCGTTGGCCATACCCTGTCC‑GCC‑C‑C‑CC‑TCTGTATAGGCAGCACATCTGTTtca > 1:6587894/1‑140 (MQ=255) cTATGTGCTCGTGTGCCTCAAGCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAATTCAAAAATAGTTTCTGCGTTGTCCATACCCTGTCC‑GCC‑C‑C‑CC‑TCTTTTAAGTAAGCGCATCATTTtcagt > 2:2306155/1‑140 (MQ=255) tATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCC‑GCC‑C‑C‑CC‑TCTTTAAAGTAATCACATCATTTtcagtc < 1:2638876/140‑1 (MQ=255) tATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTGTTAACCCCCGTTCCATCTGGCTGTTGCAGAAATAAAAAATAGTTGGTGCGTTGTCCATACCCTGTCC‑G‑C‑CGC‑CC‑TCGTTAAAGTAGGCACATCCTGTtcagtc > 2:1447910/1‑140 (MQ=255) tgCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGG‑C‑C‑C‑CC‑TCTGTAAAGTAATCACATAATTTtcagtcaggt > 2:1275527/1‑138 (MQ=21) gCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGGCC‑GCC‑C‑C‑CC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTa > 1:4641607/1‑140 (MQ=255) cTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCC‑GCC‑C‑C‑CC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTaa < 2:1039881/140‑1 (MQ=255) tCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATACAAAATAGTTTCTGCGTTGTCCATACCCTGTCC‑GCC‑C‑C‑CC‑TCTTTAAAGTGATCACATCATTTTCAGTCAGTTAAc > 2:6051704/1‑140 (MQ=255) gtgtGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCC‑GCC‑C‑C‑CC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTATCtt > 2:7270402/1‑140 (MQ=255) gtgtGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTGACATCTGGGTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCCTACCCTGTCC‑GCC‑C‑C‑CC‑GCTTTATAGTAATCACATCAGTTTCAGTCTGGTAACtt > 2:3855444/1‑140 (MQ=255) tgtgCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTGACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCC‑GCC‑C‑C‑CC‑TCTTTATAGTTATCACATCATGTTCTGTCAGTTCTCttt > 1:7136686/1‑140 (MQ=21) tgCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCC‑GCC‑C‑C‑CC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTcc > 2:6339257/1‑140 (MQ=255) tgCCTCAATCCCCCGGGTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCC‑G‑C‑C‑C‑CCATCTTTAAAGTCATCTCATCATTTTCAGTCATTTAACTTTcc > 2:522728/1‑140 (MQ=255) ccTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCC‑GCC‑C‑C‑CC‑TCTTTCAGGTAATCACATCATTTGCAGTCAGTTAACTTTGCTg > 1:10546307/1‑140 (MQ=255) ccTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCC‑GCC‑C‑C‑CC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTg > 1:8475183/1‑140 (MQ=255) cAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCC‑GCC‑C‑C‑CC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGgag < 1:8129500/140‑1 (MQ=255) cccccGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCC‑GCC‑C‑C‑CC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAAtc < 1:2929837/140‑1 (MQ=255) ccGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCC‑GCC‑C‑C‑CC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAAtctct < 2:4370914/140‑1 (MQ=255) cGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCC‑GCC‑C‑C‑CC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAAtctctc < 1:1988473/140‑1 (MQ=255) cGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAAAAGTTTCTGCGTTGTCCATACCCTTTAC‑GCC‑C‑C‑CC‑TCTTTAAAGTAATCAAAACATTTTAAGTCAGTTAACTTTCATGAAGAAactatc > 2:7568236/1‑140 (MQ=17) cGGTGAGAGCCTTCACCCCCCGCTCCCACTGCCTTTGGCAGAAATAAAAAAAAGCTCCTGCGTTGTCCATACCCGGTCC‑GCC‑C‑C‑CC‑TCACTAAAGTAATCACAACATTTTCCGTCAGTTAACTTTCCTGGAGAAtctctc < 2:7917768/140‑1 (MQ=255) gtaataGCTTAAAACCCCCGTTACATCTGGCTATTGCAGAAATACAAAATAGGTTCAGCGTTGTCCATACCCTGTCC‑GCC‑C‑C‑CC‑TCTATAAAGTACGCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCAt < 2:2074559/137‑1 (MQ=17) ttAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCC‑GCC‑C‑C‑CC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGAGACAGGcg > 1:9578861/1‑139 (MQ=255) ttAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCC‑GCC‑C‑C‑CC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCa > 2:8645657/1‑140 (MQ=255) ttAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCC‑GCC‑C‑C‑CC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCa < 1:2549582/140‑1 (MQ=255) ttAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCC‑GCC‑C‑C‑CC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCa > 2:10801494/1‑140 (MQ=255) tAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCC‑GCC‑C‑C‑CC‑TCTTTAAAGTAATCACATCATTTTCAGTCCGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAg > 2:8541817/1‑140 (MQ=255) tAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCC‑GAC‑C‑C‑CC‑TCTTTAAAGTAATCACATCATGGTCAGTCAGTTAACTTTCCTGGAGCATCTCTCATGACACAGGCAg > 2:990728/1‑140 (MQ=17) ccccGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCC‑GCC‑C‑C‑CC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAAcg < 2:2725895/140‑1 (MQ=255) cGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCC‑GCC‑C‑C‑CC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAAcgccg < 1:4458983/140‑1 (MQ=255) aTCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCC‑GCC‑C‑C‑CC‑TCGTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGACTCTCTCATGACACAGGCAGAACGCCGCCATGa > 2:6864641/1‑140 (MQ=255) ggCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCC‑GCC‑C‑C‑CC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCgg > 1:3623136/1‑140 (MQ=255) ggCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCC‑GCC‑C‑C‑CC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCgg > 2:1895550/1‑140 (MQ=255) cTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCC‑GCC‑C‑C‑CC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCggct < 1:7403573/140‑1 (MQ=255) tttGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCC‑GCC‑C‑C‑CC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCggctgg < 2:878962/140‑1 (MQ=255) cAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCC‑GCC‑C‑C‑CC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTggctgt < 1:1883585/140‑1 (MQ=255) cAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCC‑GCC‑C‑C‑CC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTggctgt < 1:2379831/140‑1 (MQ=255) aaaTAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCC‑GCC‑C‑C‑CC‑TCTTTAATGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTggctgtcag > 1:5471207/1‑140 (MQ=255) aaTAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCC‑GCC‑C‑C‑CC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTggctgtcagg > 2:5510792/1‑140 (MQ=255) aaaaaTAGTTTCTGCGTTGTCCATACCCTGTCC‑GCC‑C‑C‑CC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTggctgtcaggctgt < 1:2122015/140‑1 (MQ=255) aaTAGTTTCTGCGTTGTCCATACCCTGTCC‑GCC‑C‑C‑CC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCAc < 1:9298133/140‑1 (MQ=255) gTCCATACCCTGTCC‑GCC‑C‑C‑CC‑TCTTTAAAGTCATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGTACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGTTACTCAGCCGTc > 2:8183023/1‑140 (MQ=11) gTCCATACCCTGTCC‑GCC‑C‑C‑CC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTc > 1:5138097/1‑140 (MQ=255) cccTGTCC‑GCC‑C‑C‑CC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGc < 2:4880002/140‑1 (MQ=255) gTCC‑GCC‑C‑C‑CC‑TCTTTAAATTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGATGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 1:5000533/1‑140 (MQ=255) gTCC‑GCC‑C‑C‑CC‑TCTTTAAAGTACTCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGAGGGt > 2:5665934/1‑140 (MQ=255) gTCC‑GCC‑C‑C‑CC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGCATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 1:4763660/1‑140 (MQ=255) gTCC‑GCC‑C‑C‑CC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGACTCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 2:5104513/1‑140 (MQ=255) gTCC‑GCC‑C‑C‑CC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAAtc < 2:9039083/61‑1 (MQ=255) gTCC‑GCC‑C‑C‑CC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGTACGCCGCCATGTCCGGCTGGCTGTCAGGCTGTCACTGATAGTCAGCCGTGTGGTTGCGGGt > 1:4037191/1‑140 (MQ=14) gTCC‑GCC‑C‑C‑CC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 1:8624570/1‑140 (MQ=255) gTCC‑GCC‑C‑C‑CC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 1:1495791/1‑140 (MQ=255) gTCC‑GCC‑C‑C‑CC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 2:9670/1‑140 (MQ=255) gTCC‑GCC‑C‑C‑CC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 1:1033454/1‑140 (MQ=255) gTCC‑GCC‑C‑C‑CC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 1:11748/1‑140 (MQ=255) gTCC‑GCC‑C‑C‑CC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 2:7460179/1‑140 (MQ=255) gTCC‑GCC‑C‑C‑CC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 1:10950511/1‑140 (MQ=255) gTCC‑GCC‑C‑C‑CC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 1:10807626/1‑140 (MQ=255) gTCC‑GCC‑C‑C‑CC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 2:4610930/1‑140 (MQ=255) gTCC‑GCC‑C‑C‑CC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 1:7827857/1‑140 (MQ=255) gTCC‑GCC‑C‑C‑CC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 1:1683632/1‑140 (MQ=255) gTCC‑GCC‑C‑C‑CC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 1:5712654/1‑140 (MQ=255) gTCC‑GCC‑C‑C‑CC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 1:6088472/1‑140 (MQ=255) gTCC‑GCC‑C‑C‑CC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 1:6824660/1‑140 (MQ=255) gTCC‑GCC‑C‑C‑CC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 1:3117208/1‑140 (MQ=255) gTCC‑GCC‑C‑C‑CC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 1:3461298/1‑140 (MQ=255) gTCC‑GCC‑C‑C‑CC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 2:3462075/1‑140 (MQ=255) gTCC‑GCC‑C‑C‑CC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 2:3159811/1‑140 (MQ=255) gTCC‑GCC‑C‑C‑CC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 1:3845479/1‑140 (MQ=255) gTCC‑GCC‑C‑C‑CC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 2:2849300/1‑140 (MQ=255) gTCC‑GCC‑C‑C‑CC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt < 1:4367148/140‑1 (MQ=255) gTCC‑GCC‑C‑C‑CC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 2:10909409/1‑140 (MQ=255) gTCC‑GCC‑C‑C‑CC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCATGTAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACAGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 2:580242/1‑140 (MQ=11) gTCC‑GCC‑C‑C‑CC‑TCTTTAAAGTAATCACATCATTTTCAGACAGTTAACTTTCCTGGAGACTCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCTGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 2:6730614/1‑140 (MQ=14) gTCC‑GCC‑C‑C‑CC‑TCTTTAAAGAGATCACAGCATTTTCAGTCAGTGATCTTGCCTGGGGAATGTCTCTTGGCACAGGCCGAACGCCGCCATGACCGGCGGGCTGTCAGGCTGTCTGTGATACTCAGCGGTCGGGTTGCgggg > 2:10690124/1‑139 (MQ=2) gTCC‑GCC‑C‑C‑CC‑TATTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 1:5838991/1‑140 (MQ=255) gTCC‑G‑C‑C‑CACC‑TCTTTAAAGTACTCACTTCATTTTCAGTCAGTTCACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCCTGTCAGGCGGGGTGTCAGGCTGTCACTGATCATCAGCCGTCTGGTTGGGGGt > 2:7048949/1‑140 (MQ=14) | CGTTGTTAATATCGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCC‑G‑C‑C‑C‑CC‑TCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGT > NZ_CP025268/2773527‑2773800 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |