| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 3,239,247 | (T)6→7 | intergenic (+264/‑18) | ygjR → / → alx | Gfo/Idh/MocA family oxidoreductase/TerC family membrane protein Alx |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 3,239,241 | 1 | . | T | 97.0% | 1906.5 / 44.9 | 565 | intergenic (+258/‑24) | ygjR/alx | Gfo/Idh/MocA family oxidoreductase/TerC family membrane protein Alx |
| Reads supporting (aligned to +/- strand): ref base . (7/10); new base T (189/353); total (196/369) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.11e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.75e-01 | |||||||||||
Only 100 of 629 total aligned reads displayed.
TGTGTGAAAAAACACATCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCG‑T‑TT‑T‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGCACATGCCATGACC > NZ_CP025268/3239102‑3239375 | tgtgAAACAACACATCCGGTCACCGGGCACCCCGAAAGGAATACGCAGACGTATTCGTTATGTGTTGAAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCGTACGTATTCCGACGGTGGCCt‑t‑t > 2:11184675/1‑140 (MQ=255) tgtgAAAAAACACATCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCG‑t‑t > 2:5002502/1‑140 (MQ=255) tgtgAAAAAACACATCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCG‑t‑t > 1:7957709/1‑140 (MQ=255) tgtgAAAAAACACATCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCG‑t‑t > 1:8185265/1‑140 (MQ=255) tgtgAAAAAACACATCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCG‑t‑t > 1:10874729/1‑140 (MQ=255) tgtgAAAAAACACATCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCG‑t‑t > 1:11059039/1‑140 (MQ=255) tgtgAAAAAACACATCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCG‑t‑t < 1:8587168/140‑1 (MQ=255) tgtgAAAAAACACATCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCG‑t‑t > 1:4333288/1‑140 (MQ=255) tgtgAAAAAACACATCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCG‑t‑t > 2:3957449/1‑140 (MQ=255) tgtgAAAAAACACATCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCG‑t‑t > 1:9206032/1‑140 (MQ=255) tgtgAAAAAACACATCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCG‑t‑t > 1:2684904/1‑140 (MQ=255) tgtgAAAAAACACATCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCG‑t‑t > 1:9942783/1‑140 (MQ=255) tgtgAAAAAACACATCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGGGAGACCTTGCCGGAAGGCGAGGTGTCTGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCG‑t‑t > 2:7540023/1‑140 (MQ=255) gAAAAAACACATCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCG‑t‑tt‑t‑t > 1:5095730/1‑140 (MQ=255) cacaTCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑TT‑T‑TTAtgtg > 2:276020/1‑140 (MQ=255) caaccGGTCACCGGGCAACCCGAAACGAATACGCACACGAATTCCTAATTTGTTGTAAGTGAGACCTAGCCGGAAGGCGAGGTCTAAGCATAAAAAGCAGCGGCTCAAGTCATCCGACGTTGGCCG‑T‑TTGT‑TTATGTGTa > 2:828723/4‑140 (MQ=255) caTCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑TT‑T‑TTATGTGTa < 1:3075063/140‑1 (MQ=255) caTCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑TT‑T‑TTATGTGTa > 2:335096/1‑140 (MQ=255) ccGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑TT‑T‑TTATGTGTAAgg < 2:3855222/140‑1 (MQ=255) ggTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑TT‑T‑TTATGTGTAAGGaa < 1:9521002/140‑1 (MQ=255) ggTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑TT‑T‑TTATGTGTAAGGaa < 1:1377793/140‑1 (MQ=255) gTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑TT‑T‑TTATGTGTAAGGAAc > 2:4223424/1‑140 (MQ=255) gTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGACGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGGTGGCCGTT‑TT‑T‑TTATGTGTAAGGAAc > 1:1851461/1‑140 (MQ=255) tCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑TT‑T‑TTATGTGTAAGGAACt < 1:3614117/140‑1 (MQ=255) ggCAACCCGAAAGGAATACGCAGACGTATTCGTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑TT‑T‑TTATGTGTAAGGAACTTCTATg > 2:4738292/1‑140 (MQ=255) cAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑TT‑T‑TTATGTGTAAGGAACTTCTATGaa < 1:8824405/140‑1 (MQ=255) cccGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑TT‑T‑TTATGTGTAAGGAACTTCTATGAATAc < 2:2054302/140‑1 (MQ=255) ccGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑TT‑T‑TTATGTGTAAGGAACTTCTATGAATACt < 1:908122/140‑1 (MQ=255) gcaTACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTGGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGAT‑TT‑T‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCa < 1:3363439/138‑1 (MQ=255) gAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑TT‑T‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCa < 1:10000516/140‑1 (MQ=255) gAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑TT‑T‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCa < 2:6707305/140‑1 (MQ=255) gAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑TT‑T‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCa < 1:2571724/140‑1 (MQ=255) cGCAGACGTATTCCTATTTGGTTGTAAGTGAGACCTTGCCGGCAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGATGGCCGTT‑TT‑T‑TTATGTGTAAGGAACTTCTATGAATACTGTCGTCACTCCg < 2:433958/140‑1 (MQ=255) cGCAGACGTAGTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATACAAAGCAGCGGCTAACGTCTTCCGACGTTGGCCGTT‑TT‑T‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCg < 2:6258288/140‑1 (MQ=255) aGACGTATTCCTTTTTTGTTGTACGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑TT‑T‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTg < 1:9657897/140‑1 (MQ=255) aCGTATTCCTTTTTTGTTGTAAGTGCGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTGGGCCGTT‑TT‑T‑TTATGTGTAAGGAACTTCTCTGAAGACTGTCGGCACGCCGTTGcg > 2:8629184/1‑139 (MQ=255) cGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑TT‑T‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTa > 1:6828329/1‑140 (MQ=255) cGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑TT‑T‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTa < 2:9102656/140‑1 (MQ=255) ttttttGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑TT‑T‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCgg < 2:5415392/140‑1 (MQ=255) tttttGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑TT‑T‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGa > 1:7757580/1‑140 (MQ=255) tttGTTGTACGTGAGACCTTGCCGGAAGGCGAGGTCTAAGCATAACAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑TT‑T‑TTATGTGTAAGGAACTTCTCTGAATACTGTCGGCACGCCGTTGCTATGGGGCGGAtt < 2:263420/140‑1 (MQ=255) tgttgtAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑TT‑T‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCg < 1:4113950/140‑1 (MQ=255) tgtAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑TT‑T‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCtg < 1:4633471/140‑1 (MQ=255) gtAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑TT‑T‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCGATGGGGCGGATTCGCtgt > 1:9299149/1‑140 (MQ=255) gagaCCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑TT‑T‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCtgttgttgt < 2:4588395/140‑1 (MQ=255) gagaCCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑TT‑T‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCtgttgttgt < 2:2433458/140‑1 (MQ=255) gaCCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑TT‑T‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCg > 1:2047410/1‑140 (MQ=255) gaCCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑TT‑T‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCg > 1:3798344/1‑140 (MQ=255) cTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑TT‑T‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCa < 1:6396956/140‑1 (MQ=255) tGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑TT‑T‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCAtt > 2:10434312/1‑140 (MQ=255) tGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑TT‑T‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCAtt > 1:2314939/1‑140 (MQ=255) tGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑TT‑T‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCAtt > 1:7064867/1‑140 (MQ=255) gCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑TT‑T‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTa > 1:5372791/1‑140 (MQ=255) ggAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑TT‑T‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGc > 2:1244252/1‑140 (MQ=255) gAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑TT‑T‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCt < 1:2852015/140‑1 (MQ=255) gAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑TT‑T‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCt < 2:5569230/140‑1 (MQ=255) gAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑TT‑T‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTAt < 1:8000575/140‑1 (MQ=255) gTCTATGCATAAAAAGCAGCGTCTGACGTCTTCCGACGTTGGCCGTT‑TT‑T‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGa < 1:7453071/140‑1 (MQ=255) tCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑TT‑T‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGAc < 2:8185265/140‑1 (MQ=255) tCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑TT‑T‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGAc < 1:8298446/140‑1 (MQ=255) cTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑TT‑T‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGAcc < 1:9440228/140‑1 (MQ=255) cTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑TT‑T‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGAcc < 1:6205699/140‑1 (MQ=255) cTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑TT‑T‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGAcc < 2:925476/140‑1 (MQ=255) cTATGCATAAAAAGCAGCGGCTGACGTCGTCCGACGTTGGCCGTT‑TT‑T‑TTATGTGTAAGGAACTTCTATGAATTCTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCGATTATGCTGGCTATCGAcc < 2:7233173/140‑1 (MQ=255) aTGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑TT‑T‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCtg < 1:8443205/140‑1 (MQ=255) tGCATAAAAAGCAGCGTCTGACGTCTTCCGACGTTGGCCGTT‑TT‑T‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCtgt < 1:7808748/140‑1 (MQ=255) tGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑TT‑T‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCtgt > 1:10107616/1‑140 (MQ=255) tGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑TT‑T‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCtgt > 1:1618029/1‑140 (MQ=255) tGCATAAAAAGCAGCGGCTGACGTCTTCCGACGGTGGCCGTT‑TT‑T‑TTATGTGTAAGGAACTTCGATGAATACTGTCGGCACGCAGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCggt > 1:4463023/1‑140 (MQ=255) aaaaaGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑TT‑T‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCCTTATGCTGGCTATCGACCTGttgttg > 1:5807490/1‑140 (MQ=255) aaaaaGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑TT‑T‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGttgttg > 2:3553182/1‑140 (MQ=255) aaaaaGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑TT‑T‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGttgttg > 1:10526931/1‑140 (MQ=255) aaaaGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑TT‑T‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGc > 2:9774791/1‑140 (MQ=255) gcagcGGCTGACGTCTTCCGACGTTGGCCGTT‑TT‑T‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAggg < 2:11040137/140‑1 (MQ=255) gcagcGGCTGACGTCTTCCGACGTTGGCCGTT‑TT‑T‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAggg > 2:7736134/1‑140 (MQ=255) gcagcGGCTGACGTCTTCCGACGTTGGCCGTT‑TT‑T‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAggg > 2:6416776/1‑140 (MQ=255) gcagcGGCTGACGTCTTCCGACGTTGGCCGTT‑TT‑T‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCGATGGGGCGGTTTCGCTGTTGTTGTCGCCATTNTGCTGGCTATCGACCTGTTGTTGCAggg > 1:5965843/1‑140 (MQ=255) cagcGGCTGACGTCTTCCGACGTTGGCCGTT‑TT‑T‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAgggg < 2:9676905/140‑1 (MQ=255) cagcGGCTGACGTCTTCCGACGTTGGCCGTT‑TT‑T‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAgggg < 1:664245/140‑1 (MQ=255) cagcGGCTGACGTCTTCCGACGTTGGCCGAT‑TT‑T‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAgggg < 1:11229230/140‑1 (MQ=255) gcGGCTGACGTCTTCCGACGTTGGCCGTT‑TT‑T‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGcg < 2:1736091/140‑1 (MQ=255) cGGCTGACGTCTTCCGACGTTGGCCGTT‑TT‑T‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGcgt > 1:7143914/1‑140 (MQ=255) tGACGTCTTCCGACGTTGGCCGTT‑TT‑T‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTg < 1:7600720/140‑1 (MQ=255) aCGTCTTCCGACGTTGGCCGTT‑TT‑T‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGGTGCAGGGGCGTCGTggg < 2:8342432/140‑1 (MQ=255) tcgtCCTACGTTGGCCG‑TCAT‑C‑TTATGTGTCAGGCACTTCTCTGAAGACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCGGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGca < 2:9492374/137‑1 (MQ=255) tcatCCGACGTGGGCCGAA‑TG‑T‑TTATGTGGCCGGCACTTCTCTGAATACTGTCGGCACGCCGTTGCGATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGca < 2:7901556/137‑1 (MQ=255) tCTTCCGACGTTGGCCGTT‑TT‑T‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGca < 2:5983920/140‑1 (MQ=255) tCTTCCGACGTTGGCCGTT‑TT‑T‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGca < 2:1530303/140‑1 (MQ=255) tCTTCCGACGTTGGCCGTT‑TT‑T‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGca < 1:10393584/140‑1 (MQ=255) tCTTCCGACGTTGGCCGTT‑TT‑T‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGca < 1:8087191/140‑1 (MQ=255) tCTTCCGACGTTGGCCGAT‑TT‑T‑TTATGTGTAAGGACCTTCTATGACTACTGTCGGCACGCCGGTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGca < 2:8995946/140‑1 (MQ=255) cctgccGACGCTGGCCG‑T‑TT‑TATTATGTGTAAGCCCCTTCTCTGACTACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGGTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGGTGCAGGGGCGTCGAGGGGca < 2:6929518/136‑1 (MQ=255) ttCCGACGGTGGCCGTT‑TT‑T‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGcaca > 2:6112592/1‑140 (MQ=255) ccGACGTTGGCCGTT‑TT‑T‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGCACATg > 1:2994316/1‑140 (MQ=255) ccGACGTTGGCCGTT‑TT‑T‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGCACATg > 2:10820443/1‑140 (MQ=255) cGACGTTGGCCGTT‑TT‑T‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGCACATGc < 2:10131088/140‑1 (MQ=255) cGTTGGCCGTT‑TT‑T‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGCACATGccat < 2:3123324/140‑1 (MQ=255) ttGGCCGTT‑TT‑T‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGCACATGccatga < 2:7108455/140‑1 (MQ=255) ttGGCCGTT‑TT‑T‑TTATGTGTAAGGAACGTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGCACATGccatga < 1:3962859/140‑1 (MQ=255) ggCCGTT‑TT‑T‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGCACATGccatgacc > 1:5722551/1‑140 (MQ=255) | TGTGTGAAAAAACACATCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCG‑T‑TT‑T‑TTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGCACATGCCATGACC > NZ_CP025268/3239102‑3239375 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |