| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 3,509,139 | +C | pseudogene (137/878 nt) | php ← | phosphotriesterase‑related protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 3,509,136 | 1 | . | C | 96.6% | 3043.9 / 90.1 | 903 | pseudogene (140/878 nt) | php | phosphotriesterase‑related protein |
| Reads supporting (aligned to +/- strand): ref base . (9/22); new base C (466/403); total (476/427) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 9.43e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 986 total aligned reads displayed.
CACATGTTCCGGGAAAAACGCGTCCTGGTAATAACCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACG‑CC‑C‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAGGGTGTAACCCGTCGGATCAAAA > NZ_CP025268/3508998‑3509270 | cacaTGTTCCGGGAAAAACGCGTCCTGGTAATAACCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTacgcacg‑c > 1:7400098/1‑140 (MQ=255) aTGTTCCGGGAAAAACGCGTCCTGGTAATAACCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACG‑cc‑cc < 1:8856375/140‑2 (MQ=255) aTGTTCCGGGAAAAACGCGTCCGGGTAATAACCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACG‑cc‑cc < 2:9815799/140‑2 (MQ=255) tGTTCCGGGAAAAACGCGTCCTGGTAAGAACCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACG‑cc‑ccg < 2:600455/140‑3 (MQ=255) ttCCGGGAAAAACGCGTCCTGGTAATAACCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACG‑CC‑C‑cggg < 2:2674526/140‑2 (MQ=255) gtCCGGGAAAAACGCGTCCTTGTAATAACCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCAGTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATAACGCACG‑CC‑C‑cggg < 2:10717098/139‑2 (MQ=255) ggAAAAACGCGTCCTGGTAATAACCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑C‑GGGtcatc < 1:5134823/140‑1 (MQ=255) cgTCCTGGTAATAACCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑C‑GGGTCATCAGGTCGTTc < 1:4390692/140‑1 (MQ=255) taataaCCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑C‑GGGTCATCAGGTCGTTCATCTCCTg > 1:8307168/1‑140 (MQ=255) aataaCCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑C‑GGGTCATCAGGTCGTTCATCTCCTgg < 2:3600666/140‑1 (MQ=255) aCCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑C‑GGGTCATCAGGTCGTTCATCTCCTGGCaaa < 1:103885/140‑1 (MQ=255) aCCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑C‑GGGTCATCAGGTCGTTCATCTCCTGGCaaa < 1:5890060/140‑1 (MQ=255) aCCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑C‑GGGTCATCAGGTCGTTCATCTCCTGGCaaa < 1:3072134/140‑1 (MQ=255) aCCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACAGTACGCACGCCC‑C‑GGGTCATCAGGTCGTTCATCTCCTGGCaaa < 2:6969982/140‑1 (MQ=255) cGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑C‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATg > 1:2493739/1‑140 (MQ=255) cGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑C‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATg < 2:10111647/140‑1 (MQ=255) gTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑C‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGaa > 1:1986869/1‑140 (MQ=255) gTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑C‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGaa > 1:8737782/1‑140 (MQ=255) gTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑C‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGaa > 1:209344/1‑140 (MQ=255) tACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑C‑GGGTCATCAGGTCGTTCATCTCCTGGCAACTGAAc < 2:5062089/140‑1 (MQ=255) tACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑C‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAAc > 1:3690823/1‑140 (MQ=255) tACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑C‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAAc < 1:5268736/140‑1 (MQ=255) tACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑C‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAAc < 1:5688236/140‑1 (MQ=255) tACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCAGAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑C‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAAc < 2:9174453/140‑1 (MQ=255) aGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑C‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCa < 2:7453828/140‑1 (MQ=255) aGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑C‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCa < 1:3796465/140‑1 (MQ=255) ggCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑C‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCAt < 2:2218441/140‑1 (MQ=255) ggCCAACACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑C‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCAt < 2:1522293/140‑1 (MQ=255) gCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑C‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATa > 1:9395281/1‑140 (MQ=255) gCCACCACGTTGATCCCCGTCTCGCGCATGACATCAAGCATAATTTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCACTCACCTTACGCACGCCC‑C‑GGGTCATCAGGTCGTTCATCTCCTGGCACATGAACGCAtc > 2:3012238/1‑139 (MQ=255) ccccacGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCAGGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑C‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACt > 2:6799236/3‑140 (MQ=255) ccacGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑C‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGa > 1:9912681/1‑140 (MQ=255) ccacGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑C‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGa > 2:9492203/1‑140 (MQ=255) cacGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑C‑GGGTCATCCGGTCGTTCATCTCCTGGCAAATGAACGCATACTGag > 2:7295053/1‑139 (MQ=255) cacGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑C‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGAt > 2:2493683/1‑140 (MQ=255) cacGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑C‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGAt > 1:169332/1‑140 (MQ=255) cacGTTGATCCCAGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCACAATCACATTACGCACGCCC‑C‑GGGTCATCAGGTCGTTCATCTCCTGGCAAAAGAACGCATACTGAt > 2:3300093/1‑140 (MQ=255) tGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑C‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAgg > 1:1275843/1‑140 (MQ=255) aTCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCCTTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑C‑GGGTCATCAGGTCGTTAATCTCCTGGCAAATGAACGCAGACTGATCAAggcg > 1:10615188/1‑140 (MQ=255) aTCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑C‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAggcg > 1:10725904/1‑140 (MQ=255) aTCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑C‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAggcg > 2:11012767/1‑140 (MQ=255) ccccGTCTCGCGCTTTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑C‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAggcggc < 1:141899/140‑1 (MQ=255) ccccGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑C‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAggcggc < 1:2832760/140‑1 (MQ=255) ccccGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑C‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAggcggc < 2:7982042/140‑1 (MQ=255) ccccGACTCTCGCCTAACATCACGCATAGATTCCGCTTGGCGCCGCTTGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑C‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAggcggc < 1:10937127/140‑1 (MQ=255) cGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑C‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGt > 1:2754120/1‑140 (MQ=255) cGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑C‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGt > 2:5265264/1‑140 (MQ=255) gTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑C‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTc > 1:410351/1‑140 (MQ=255) tctcGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑C‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAggcggc > 1:11112149/1‑135 (MQ=255) gcgcATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑C‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACgt < 1:2220023/140‑1 (MQ=255) cgcATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑C‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACgtt > 1:1826406/1‑140 (MQ=255) tACATCAATCATAAAGTGCGCATTGCGCCCCATGTAACGGTTGGTCATATCAATCACATTACGCACG‑CCAC‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGtttt < 1:7077470/140‑1 (MQ=255) tACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑C‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGtttt < 1:6676866/140‑1 (MQ=255) tACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑C‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGtttt < 2:4261551/140‑1 (MQ=255) aacttgcgcattgcgcCCCATGCAACGGTTGGTCATCTCAAGCACATTACGCACGCCC‑C‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTACAGCCGgaga < 2:8593720/137‑1 (MQ=255) aaaTTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑C‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGgaga < 1:7780741/140‑1 (MQ=255) aaaTTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑C‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGgaga > 1:8552169/1‑140 (MQ=255) aaaTTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑C‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGgaga < 1:804687/140‑1 (MQ=255) aaTTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑C‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGgagag > 1:6189020/1‑140 (MQ=255) ttgcgcattgcgcCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑C‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGAt < 1:2628354/140‑1 (MQ=255) ttgcgcattgcgcCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑C‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGAt < 2:1382280/140‑1 (MQ=255) gcgcattgcgcCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑C‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCa < 2:5846806/140‑1 (MQ=255) cgcattgcgcCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑C‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGAt > 1:9128095/1‑137 (MQ=255) cgcattgcgcCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑C‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCaa > 1:6847768/1‑140 (MQ=255) cgcattgcgcCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑C‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGAGCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCaa > 2:10898953/1‑140 (MQ=255) cgcattgcgcCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑C‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACAGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCaa > 1:6043841/1‑140 (MQ=255) gcattgcgcCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑C‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAat < 1:335244/140‑1 (MQ=255) cgcCCCATGTAACGGTTGGTCATCTCAATCACATTTCGCACGCCC‑C‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAg < 2:8785212/140‑1 (MQ=255) cgcCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑C‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGGCGGAGAGATCAATATGCAg < 2:4814886/140‑1 (MQ=255) cgcCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑C‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAg < 2:404402/140‑1 (MQ=255) cgcCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑C‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAg < 2:7839584/140‑1 (MQ=255) ccccATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑C‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGAt > 1:469749/1‑140 (MQ=255) aCGGTTGGTCATCTCAATCACATTACGCACGCCC‑C‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATggg > 1:6512704/1‑140 (MQ=255) cGGTTGGTCATCTCAATCACATTACGCACGCCC‑C‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGc < 1:6386/140‑1 (MQ=255) ggTTGGTCATCTCAATCACATTACGCACGACC‑C‑GGGTCATCAGGTCGTACATCTCCTGGCAAATGAAATCATAATGATCAAGTCGTAAGTCCACGTTGTTTTTAAAGAAGGAGAGAACAATATGCAGATTCTCATggtct > 2:658801/1‑137 (MQ=255) ggTTGGACATCTCAATCACATTACGCACGCCC‑C‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCg < 2:11192072/140‑1 (MQ=255) gcttGGTCATCTCAATCACCTTCCGCACG‑CC‑CTGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCg < 1:9773528/138‑1 (MQ=255) ttGGTCATCTCAATCACATTACGCACGCCC‑C‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTATTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAg > 2:1056139/1‑140 (MQ=255) ggTCATCTCAATCACATTACGCACGCCC‑C‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAggg > 2:969780/1‑140 (MQ=255) ggTCATCTCAATCACATTACGCACGCCC‑C‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAggg > 2:9043870/1‑140 (MQ=255) ggTCATCTCAATCACATTACGCACGCCC‑C‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAggg > 2:7684995/1‑140 (MQ=255) ggTCATCTCAATCACATTACGCACGCCC‑C‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTGTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAggg > 2:2429047/1‑140 (MQ=255) tCATCTCAATCACATTACGCACGCCC‑C‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAGGgtg > 1:7156474/1‑140 (MQ=255) ctcAATCACATTACGCACGCCC‑C‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAGGGTGTAAc > 2:3770289/1‑140 (MQ=255) aTCACATTACGCACGCCC‑C‑GGGTCATCAGGTCGTTCATCTCCTGGCACATGAACGCAGACTGATCAAGGCGGCAGTCCACGTTGTTTTGAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAGGGTGTAACCCGt < 2:1939346/140‑1 (MQ=255) aTCACATTACGCACGCCC‑C‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAGGGTGTAACCCGt < 2:4645372/140‑1 (MQ=255) aTCACATTACGCACGCCC‑C‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAGGGTGTAACCCGt < 2:6387533/140‑1 (MQ=255) aTCACATTACGCACGCCC‑C‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAGGGTGTAACCCGt < 2:8319103/140‑1 (MQ=255) ttACGCACGCCC‑C‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAGGGTGTAACCCGTCGGATc > 2:2884899/1‑140 (MQ=255) acgcacgcCC‑C‑GGGTCTTCAGGTCGTTCCTCTCCTGGCAAATGAACGCATCCTGCTCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAGGGTGTAACCCGTCGGATCaa < 1:11320715/140‑1 (MQ=255) acgcacgcCC‑C‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAGGGTGTAACCCGTCGGATCaa < 1:10196892/140‑1 (MQ=255) acgcacgcCC‑C‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAGGGTGTAACCCGTCGGATCaa < 1:7595143/140‑1 (MQ=255) acgcacgcCC‑C‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAGGGTGTAACCCGTCGGATCaa < 1:9628593/140‑1 (MQ=255) acgcacgcCC‑C‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAGGGTGTAACCCGTCGGATCaa < 1:10004013/140‑1 (MQ=255) acgcacgcCC‑C‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAGGGTGTAACCCGTCGGATCaa < 2:10246204/140‑1 (MQ=255) acgcacgcCC‑C‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAGGGTGTAACCCGTCGGATCaa < 2:1757596/140‑1 (MQ=255) acgcacgcCC‑C‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAGGGTGTAACCCGTCGGATCaa < 2:5507008/140‑1 (MQ=255) acgcacgcCC‑C‑GGGTCATCAGGTCGTTCAGCTCCTGGCAAATGCACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCACTATGCAGATGCTCATGGGCGAGGGTGTAACCCGTCGGATCaa < 2:10298360/140‑1 (MQ=255) cgcacgcCC‑C‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAGGGTGTAACCCGTCGGATCaaa > 1:7873352/1‑140 (MQ=255) cgcacgcCC‑C‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAGGGTGTAACCCGTCGGATCaaa > 2:2137233/1‑140 (MQ=255) | CACATGTTCCGGGAAAAACGCGTCCTGGTAATAACCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACG‑CC‑C‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAGGGTGTAACCCGTCGGATCAAAA > NZ_CP025268/3508998‑3509270 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |