| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NZ_CP025268 | 2,529,951 | +GTATGAATT | intergenic (+25/+5) | CXP41_RS13300 → / ← yfeR | outer membrane protein OmpK/LysR family transcriptional regulator |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NZ_CP025268 | = 2529951 | 4 (0.010) | 530 (0.850) +GTATGAATT |
127/258 | 0.3 | 99.3% | intergenic (+25/+5) | CXP41_RS13300/yfeR | outer membrane protein OmpK/LysR family transcriptional regulator |
| ? | NZ_CP025268 | 2529952 = | 4 (0.010) | intergenic (+26/+4) | CXP41_RS13300/yfeR | outer membrane protein OmpK/LysR family transcriptional regulator | |||||
Only 100 of 686 total aligned reads displayed.
GTGGAATGCAACATCACACATTACTACGGGGATTCAGTATCGATATGCGGATGACAAACTGGGCGAAGATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCA‑‑‑‑‑‑‑‑‑CACTTTATATCTGATACAACGGATCCCCTTCCCGCCCAGCCATTAGCGCATTGCCCTGGTCTCGTACCACGTCCCATAAAGCTTCAGCGGCGGTGGAAAGTGAACGGTTCTTCCTGCGCACCAGCATCAA > NZ_CP025268/2529812‑2530081 | gtggAATGCAACATCACACATTACTACGGGGATTCAGTATCGATATGCGGATGACAAACTGGGCGAAGATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGca > 1:2304051/1‑140 (MQ=255)ggggAATGCAACATCACACATTACTACGGGGATTCAGTATCGATATGCGGATGACACACTGGGCGAAGATTTTTACCAGGATGCGATAATCTACTCCATCAAGTTTAACTTCTGATGGATTACTGCCGGGGCTCCCGGca > 2:4127050/3‑140 (MQ=255) ggAATGCAACATCACACATTACTACGGGGATTCAGTATCGATATGCGGATGACAAACTGGGCGAAGATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAgt < 1:4861345‑M1/140‑3 (MQ=255) tGCAACATCACACATTACTACGGGGATTCAGTATCGATATGCGGATGACAAACTGGGCGAAGATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAgtatga > 1:7574632‑M1/1‑134 (MQ=255) cAACATCACACATTACTACGGGGATTCAGTATCTATATGCGGATGACAAACTGGGCGAAGATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAgtatgaat > 2:3036203‑M1/1‑132 (MQ=255) cAACATCACACATTACTACGGGGATTCAGTATCGATATGCGGATGACAAACTGGGCGAAGATTTTTACCAGGATGCGATACTCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAgtatgaat > 1:6155468‑M1/1‑132 (MQ=255) cAACATCACACATTACTACGGGGATTCAGTATCGATATGCGGATGACAAACTGGGCGAAGATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAAGTTCTGATTTATTACTGCCGGGGCTCCCGGCAgtatgaat > 2:8242251‑M1/1‑132 (MQ=255) cAACATCACACATTACTACGGGGATTCAGTATCGATATGCGGATGACAAACTGGGCGAAGATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAgtctgaat > 2:2777907‑M1/1‑132 (MQ=255) cAACATCACACATTACTACGGGGATTCAGTATCGATATGCGGATGACAAACTGGGCGAAGATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAgtatgaat > 2:3356354‑M1/1‑132 (MQ=255) cAACATCACACATTACTACGGGGATTCAGTATCGATATGCGGATGACAAACTGGGCGAAGATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAgtatgaat > 1:7151025‑M1/1‑132 (MQ=255) cAACATCACACATTACTACGGGGATTCAGTATCGATATGCGGATGACAAACTGGGCGAAGATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAgtatgaat > 2:4296632‑M1/1‑132 (MQ=255) cAACATCACACATTACTACGGGGATTCAGTATCGATATGCGGATGACAAACTGGGCGAAGATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAgtatgaat > 1:9212390‑M1/1‑132 (MQ=255) cAACATCACACATTACTACGGGGATTCAGTATCGATATGCGGATGACAAACTGGGCGAAGATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAgtatgaat > 1:4626084‑M1/1‑132 (MQ=255) cAACATCACACATTACTACGGGGATTCAGTATCGATATGCGGATGACAAACTGGGCGAAGATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAgtatgaat > 1:9591027‑M1/1‑132 (MQ=255) cAACATCACACATTACTACGGGGATTCAGTATCGATATGCGGATGACAAACTGGGCGAAGATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAgtatgaat > 2:8033510‑M1/1‑132 (MQ=255) cAACATCACACATTACTACGGGGATTCAGTATCGATATGCGGATGACAAACTGGGCGAAGATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGAGTGATTACTGCCGGGGCTCCCGGCAgtatgact > 2:5953874‑M1/1‑132 (MQ=255) aaCATCACACATTACTTCGGGGATTCAGTATCGATATGCGGATGACAAACTGGGCGAAGATTTTTACCAGGATGCGATAATCTACTCCATCAAACTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAgtatgaatt < 2:3109499‑M1/140‑10 (MQ=255) aaCATCACACATTACTACGGGGATTCAGTATCGATATGCGGATGACAAACTGGGCGAAGATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAgtatgaatt < 1:648785‑M1/140‑10 (MQ=255) cATCACACATTACTACGGGGATTCAGTATCGATATGCGGATGACAAACTGGGCGAAGATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAgtatgaattca < 1:1073355‑M1/140‑12 (MQ=255) tCACACATTACTACGGGGATTCAGTATCGATATGCGGATGACAAACTGGGCGAAGATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAgtatgaattcact < 2:1975540‑M1/140‑14 (MQ=255) tCACACATTACTACGGGGATTCAGTATCGATATGCGGATGACAAACTGGGCGAAGATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAgtatgaattcact > 1:3797910‑M1/1‑127 (MQ=255) tCACACATTACTACGGGGATTCAGTATCGATATGCGGATGACAAACTGGGCGAAGATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAgtatgaattcact < 1:2796114‑M1/140‑14 (MQ=255) tCACACATTACTACGGGGATTCAGTATCGATATGCGGATGACAAACTGGGCGAAGATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAgtatgaattcact < 2:10985580‑M1/140‑14 (MQ=255) tCACACATTACTACGGGGATTCAGTATCGATATGCGGATGACAAACTGGGCGAAGATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAgtatgaattcact < 1:5835366‑M1/140‑14 (MQ=255) tCACACATTACTACGGGGATTCAGTATCGATATGCGGATGACAAACTGGGCGAAGATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAgtatgaattcact < 2:400389‑M1/140‑14 (MQ=255) tCACACATTACTACGGGGATTCAGTATCGATATGCGGATGACAAACTGGGCGAAGATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAgtatgaattcact < 1:8889503‑M1/140‑14 (MQ=255) acacacatTACTACGGGGATTCAGTATCGATATGCGGATGACAAACTGGGCGAAGATATTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAgtatgaattcact < 2:7480375‑M1/139‑14 (MQ=255) cacaTTACTACGGGGATTCAGTATCGATATGCGGATGACAAACTGGGCGAAGATTTTTACCAGGATGCGATACTCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAgtatgtattcactcta > 1:3211049‑M1/1‑124 (MQ=255) cacaTTACTACGGGGATTCAGTATCGATATGCGGATGACAAACTGGGCGAAGATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAgtctgaattcactcta > 2:4795714‑M1/1‑124 (MQ=255) cacaTTACTACGGGGATTCAGTATCGATATGCGGATGACAAACTGGGCGAAGATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAgtatgaattcactcta > 1:9454159‑M1/1‑124 (MQ=255) cacaTTACTACGGGGATTCAGTATCGATATGCGGATGACAAACTGGGCGAAGATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAgtatgaattcact < 1:7854408‑M1/137‑14 (MQ=255) cacaTTACTACGGGGATTCAGTATCGATATGCGGATGACAAACTGGGCGAAGATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAgtatgaattcact > 2:7854408‑M1/1‑124 (MQ=255) cacaTTACTACGGGGATTCAGTATCGATATGCGGATGACAAACTGGGCGAAGATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCAGGCAgtatgaatacactcta > 2:11180564‑M1/1‑124 (MQ=255) aTTACTACGGGGATTCAGTATCGATCTGCGGATGACAAACTGGGCGAAGATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAgtatgaattctctctatat > 2:840971‑M1/1‑121 (MQ=255) aTTACTACGGGGATTCAGTATCGATATGCGGATGACAAACTGGGCGAAGATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAgtatgaattcactctatat > 1:11110117‑M1/1‑121 (MQ=255) ttACTACGGTGATTCAGTATCGATATGCGGATGACAAACTGGGCGAAGATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAgtatgaattcactctatatc < 2:8683482‑M1/140‑21 (MQ=255) ttACTACGGGGATTCAGTATCGATATGCGGATGACAAACTGGGCGAAGATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAgtatgaattcactctatatc < 1:9042260‑M1/140‑21 (MQ=255) actacGGGGATTCAGTATCGATATGCGGATGACAAACTGGGCGAAGATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAgtatgaattcactctatatctg > 2:4990961‑M1/1‑118 (MQ=255) actacGGGGATTCAGTATCGATATGCGGATGACAAACTGGGCGAAGATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAgtatgaattcactctatatctg > 1:4330405‑M1/1‑118 (MQ=255) actacGGGGATTCAGTATCGATATGCGGATGACAAACTGGGCGAAGATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAgtatgaattcactctatatctg > 1:51444‑M1/1‑118 (MQ=255) ggATTCAGTATCGATATGCGGATGACAAACTGGGCGAAGATTTTTACCAGGATGCGATAATCTACTCCCTCAACTTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAgtctgtattccctctagatctgatacaac > 1:117964‑M1/1‑111 (MQ=255) ggATTCAGTATCGATATGCGGATGACAAACTGGGCGAAGATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAgtatgaattcactctatatctgatacaac > 1:10053716‑M1/1‑111 (MQ=255) ggATTCAGTATCGATATGCGGATGACAAACTGGGCGAAGATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAgtatgaattcactctatatctgatacaac > 1:7355519‑M1/1‑111 (MQ=255) aTTCAGTATCGATATGCGGATGACAAACTGGGCGAAGATTTTTACCAGGATGCGATAATCTCCTCCATCAAATTTAACTTCTGATGGATTACTGCCGGGGCTCCCGGCAgtctgacttcactctatatctgatacaacgg > 2:6179487‑M1/1‑109 (MQ=255) cAGTATCGATATGCGGATGACAAACTGGGCGAAGATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAgtatgaattcactctatatctgatacaacggatc > 1:5606695‑M1/1‑106 (MQ=255) cAGTATCGATATGCGGATGACAAACTGGGCGAAGATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAgtatgaattcactctatatctgatacaacggatc > 1:4068249‑M1/1‑106 (MQ=255) gATATGCGGATGACAAACTGGGCGAAGATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAgtatgaattcactctatatctgatacaacggatccccttcc > 1:2508017‑M1/1‑99 (MQ=255) atatGCGGATGACAAACTGGGCGAAGATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAgtatgaattcactctatatctgatacaacggatccccttccc > 2:11298038‑M1/1‑98 (MQ=255) atatGCGGATGACAAACTGGGCGAAGATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAgtatgaatt < 1:6831857‑M1/107‑10 (MQ=255) atGCGGATGACAACCTGGGCGAAGATTTGTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAgtatgaattcactctatatctgatacaacggatccccttcccgc < 1:5003517‑M1/140‑45 (MQ=255) atGCGGATGACAAACTGGGCGAAGATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAgtatgaattcactctatatctgatacaacggatccccttcccgc < 1:8101204‑M1/140‑45 (MQ=255) tGCGGATGACAAACTGGGCGAAGATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAgtatgaattcactctatatctgatacaacggatccccttcccgcc > 2:10012388‑M1/1‑95 (MQ=255) cGGATGACAAACTGGGCGAAGATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAgtatgaattcactctatatctgatacaacggatccccttcccgccca < 2:5577355‑M1/140‑48 (MQ=255) cGGATGACAAACTGGGCGAAGATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAgtatgaattcactctatatctgatacaacggatccccttcccgccca > 1:6338587‑M1/1‑93 (MQ=255) cGGATGACAAACTGGGCGAAGATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAgtatgaattcactctatatctgatacaacggatccccttcccgccca > 1:1744908‑M1/1‑93 (MQ=255) cGGATGACAAACTGGGCGAAGATTTTTACCAGGATGCGATAAGCTACTCCATCCAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAgtctgaattcactctctatctgatacaacggatccccttcccgccca > 2:6813560‑M1/1‑93 (MQ=255) gATGACAAACTGGGCGAAGATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAgtatgaattcactctatatctgatacaacggatccccttcccgcccagc > 1:10219033‑M1/1‑91 (MQ=255) tGGGCGAAGATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAgtatgaattcactctatatctgatacaacggatccccttcccgcccagccattagcgca < 2:9635695‑M1/140‑60 (MQ=255) tGGGCGAAGATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAgtatgaattcactctatatctgatacaacggatccccttcccgcccagccattagcgca < 2:9393673‑M1/140‑60 (MQ=255) tGGGCGAAGATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAgtatgaattcactctatatctgatacaacggatccccttcccgcccagccattagcgca < 2:5767789‑M1/140‑60 (MQ=255) gggCGAAGATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAgtatgaattcactctatatctgatacaacggatccccttcccgcccagccatagcgcatt > 1:9758435‑M1/1‑80 (MQ=255) gggCGAAGATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAggatgaattcactctatatctgatacaacggatccccttcccgcccagccattagcgcat > 1:1404292‑M1/1‑80 (MQ=255) acgatTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAgtatgacttcactcgatatctgatacaacggaaccccgtcccgcccagccattagcgcattgccc < 2:1793659‑M1/138‑66 (MQ=255) aaGATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAgtatgaattcactctatatctgatacaacggatccccttcccgcccagccattagcgcattgccc < 2:10197280‑M1/140‑66 (MQ=255) aaGATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAgtatgaattcactctatatctgatacaacggatccccttcccgcccagccattagcgcattgccc < 2:2037862‑M1/140‑66 (MQ=255) aaGATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAgtatgaattcactctatatctgatacaacggatccccttcccgcccagccattagcgcattgccc > 1:4434684‑M1/1‑75 (MQ=255) gATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAgtatgaattcactctatatctgatacaacggatccccttcccgcccagccattagcgcattgccctg < 2:7049207‑M1/140‑68 (MQ=255) ccAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAgtatgaattcactctatatctgatacaacggatccccttcccgcccagccattagcgcattgccctggtctcgta < 1:5710192‑M1/140‑76 (MQ=255) aGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAgtatgaattcactctatatctgatacaacggatccccttcccgcccagccattagcgcattgccctggtctcgtacc < 2:6406745‑M1/140‑78 (MQ=255) aTGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAgtatgaattcactctatatctgatacaacggatccccttcccgcccagccattagcgcattgccctggtctcgtaccacg < 2:8869231‑M1/140‑81 (MQ=255) cGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAgtatgaattcactctatatctgatacaacggatccccttcccgcccagccattagcgcattgccctggtctcgtaccacgtcc > 2:8937471‑M1/1‑57 (MQ=255) ctaATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAgtatgaattcactctatatctgatacaacggatccccttcccgcccagccattagcgcattgccctggtctcgtaccacgtccca < 1:3582317‑M1/139‑86 (MQ=255) aTAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAgtatgaattcactctatatctgatacaacgtatccccttcccgcccagccattagcgcattgccctggtctcgtaccacgtccca < 2:5423372‑M1/140‑86 (MQ=255) aaTCTACTCCATCAAATTTCACTTCTGATTGATGACTGCCGGGGCTCCCGGCAgtatgaattcactctatatctgatacaacggatccccgtcccgcccagccattagcgcattgccctggtctcgtaccacgtcccata < 2:7183827‑M1/140‑88 (MQ=255) aaTCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAgtatgaattcactctatatctgatacaacggatccccttcccgcccagccattagcgcattgccctggtctcgtaccacgtcccata < 2:10555727‑M1/140‑88 (MQ=255) tCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAgtatgaattcactctatatctgatacaacggatccccttcccgcccagccattagcgcattgccctggtctcgtaccacgtcccataaa > 2:9712357‑M1/1‑51 (MQ=255) tCCATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAgtatgaatgcactctatatctgatacaacggatccccttcccgcccagccatttgcgcattgccctggtctcgtaccccgtcccataaagcttc > 1:9349333‑M1/1‑46 (MQ=255) cATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAgtatgaattcactctatatctgatacaacggatccccttcccgcccagccattagcgcattgccctg > 1:1938966‑M1/1‑44 (MQ=255) cATCAAATTTAACGTCTGATTGAGTACTGCCGGGGCTCCCGGCAGTTTGACTTCACTCTATAGCTGAGACAACGGATCCCCTTCCCGCCCAGCCAGTAGCGCATTGCCCGGGTCTCGTACCACGTCCCATAAAGCTTCAg < 2:5197121/140‑1 (MQ=255) tCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAgtatgacttcactctatatctgatacaacggatccccttcccgcccagccattagcgcattgccctggtctcgtaccacgtcccataaagcttcagcg > 1:9877013‑M1/1‑42 (MQ=255) tCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAgtatgaattcactatatatctgatacaacggatccccttcccgcccagccattagcgcattgccctggtctcgtaccacgtcccataaagcttcagcg > 1:2111040‑M1/1‑42 (MQ=255) tCAAATTTAACTTCTGATTGATAACTGCCGGGGCTCCCGGCAgtatgacttcactctatatctgataccacggaaccccttcccgcccagccattagcgcattgccctggtctcgtaccacgtcccatcaagcttcagcg > 2:6912534‑M1/1‑42 (MQ=255) cAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAgtatgaattcactctatatctgatacaacggatccccttcccgcccagccattagcgcattgccctggtctcgtaccacgtcccataaagcttcagcgg > 2:7377028‑M1/1‑41 (MQ=255) tAACTTCTGATTGATTACTGCCGGGGCTCCCGGCAgtatgaattcactctatatctgatacaacggatccccttcccgcccagccattagcgcattgccctggtctcgtaccacgtcccataaagcttcagcggcggtgg < 2:4550020‑M1/140‑106 (MQ=255) aaCTTCTGATTGATTACTGCCGGGGCTCCCGGCAgtatgaattcactctatatctgatacaacggatccccttcccgcccagccattagcgcattgccctggtctcgtaccacgtcccataaagcttcagcggcggtgga > 1:10421948‑M1/1‑34 (MQ=255) cTGATTGATTACTGCCGGGGCTCCCGGCAgtatgaattcactctatatctgatacaacggatccccttcccgcccagccattagcgcattgccctggtctcgtaccacgtcccataaagcttcagcggcggtggaaagtg < 1:5389915‑M1/140‑112 (MQ=255) tgattgatTACTGCCGGGGCTCCCGGCAgtatgaattcactctatatctgatacaacggatccccttcccgcccagccattagcgcattgccctggtctcgtaccacgtcccataaagcttcagcggcggtggaaagtga < 2:1248563‑M1/140‑113 (MQ=255) attgattACTGCCGGGGCTCCCGGCAgtatgaattcactctatatctgatacaacggatccccttcccgcccagccattagcgcattgccctggtctcgtaccacgtcccataaagcttcagcggcggtggaaagtgaac > 1:8377761‑M1/1‑26 (MQ=255) ttgattACTGCCGGGGCTCCCGGCAgtatgaattcactctatatctgatacaacggatccccttcccgcccagccattagcgcattgccctggtctcgtaccacgtcccataaagcttcagcggcggtggaaagtgaacg > 2:3717885‑M1/1‑25 (MQ=255) gCCGGGGCTCCCGGCAgtatgaattcactctatatctgatacaacggatccccttcccgcccagccattagcgcattgccctggtctcgtaccacgtcccataaagcttcagcggcggtggaaagtgaacggttcttcct > 1:418400‑M1/1‑16 (MQ=255) gggCTCCCGGCAgtctgaattcactctatatctgatacaacggatccccttcccgcccagccattagcgcattgccctggtctcgtaccacgtcccataaagcttcagcggcggtggaaagtgaacggtgcttcctgcgc > 1:8584312‑M1/1‑12 (MQ=255) gggCTCCCGGCAgtatgaattcactctatatctgatacaacggatccccttcccgcccagccattagcgcattgccctggtctcgtaccacgtcccataaagcttcagcggcggtggaaagtgaacggttcttcctgcgc > 2:2488903‑M1/1‑12 (MQ=255) gCTCCCGGCAgtatgaattcactctatatctgatacaacggatccccttcccgcccagccattagcgcattgccctggtctcgtaccacgtcccataaagcttcagcggcggtggaaagtgaacggttcttcctgcgcac < 1:7013137‑M1/140‑131 (MQ=255) gCTCCCGGCAgtatgaattcactctatatctgatacaacggatccccttcccgcccagccattagcgcattgccctggtctcgtaccacgtcccataaagcttcagcggcggtggaaagtgaacggttcttcctgcgcac < 2:2304051‑M1/140‑131 (MQ=255) tCCCGGCAgtatgaattcactctatatctgatacaacggatccccttcccgcccagccattagcgcattgccctggtctcgtaccacgtcccataaagcttcagcggcggtggaaagtgaacggttcttcctgcgcacca < 2:9119370‑M1/140‑133 (MQ=255) cccGGCAgtatgaattcactctatatctgatacaacggctccccttcccgcccagccattagcgcattgccctggtctcgtaccacgtcccataaagcttcagcggcggtggacagtgaacggttcttcctgcgcaccag > 1:3364592‑M1/1‑7 (MQ=255) cGGCAgtatgaattcactctatatctgatacaacggatccccttcccgcccagccattagcgcattgccctggtctcgtaccacgtcccataaagcttcagcggcggtggaaagtgaacggttcttcctgcgcaccagca > 1:5548102‑M1/1‑5 (MQ=255) cGGCAgtatgaattcactctatatctgatacaacggatccccttcccgcccagccattagcgcattgccctggtctcgtaccacgtcccataaagcttcagcggcggtggaaagtgaacggttcttcctgcgcaccagca > 2:1732378‑M1/1‑5 (MQ=255) ggCAgtatgaattcactctatatctgatacaacggatccccttcccgcccagccattagcgcattgccctggtctcgtaccacgtcccataaagcttcagcggcggtggaaagtgaacggttcttcctgcgcaccagcat > 2:6668497‑M1/1‑4 (MQ=255) agtatgaattcactctatatctgatacaacggatccccttcccgcccagccattagcgcattgccctggtctcgtaccacgtcccataaagcttcagcggcggtggaaagtgaacggttcttcctgcgcaccagcatcaa > 2:3564414‑M1/1‑1 (MQ=255) | GTGGAATGCAACATCACACATTACTACGGGGATTCAGTATCGATATGCGGATGACAAACTGGGCGAAGATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGATTGATTACTGCCGGGGCTCCCGGCA‑‑‑‑‑‑‑‑‑CACTTTATATCTGATACAACGGATCCCCTTCCCGCCCAGCCATTAGCGCATTGCCCTGGTCTCGTACCACGTCCCATAAAGCTTCAGCGGCGGTGGAAAGTGAACGGTTCTTCCTGCGCACCAGCATCAA > NZ_CP025268/2529812‑2530081 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |