| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NZ_CP025268 | 3,864,444 | +GCC | pseudogene (1078/1613 nt) | CXP41_RS20140 ← | PTS sugar transporter subunit IIB |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NZ_CP025268 | = 3864444 | 11 (0.020) | 597 (0.920) +GCC |
128/270 | 0.4 | 98.2% | pseudogene (1078/1613 nt) | CXP41_RS20140 | PTS sugar transporter subunit IIB |
| ? | NZ_CP025268 | 3864445 = | 11 (0.020) | pseudogene (1077/1613 nt) | CXP41_RS20140 | PTS sugar transporter subunit IIB | |||||
Only 100 of 635 total aligned reads displayed.
AGTGTGCGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACTTAGTCAATCAGACCTCC‑G‑CCA‑‑TGTT‑‑CACC‑ACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGCGGTTAAGG > NZ_CP025268/3864306‑3864578 | gtgtGCGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCCA‑‑TGTTg > 2:1561418‑M1/1‑139 (MQ=255) gtgCGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTTGTCAATCAGACCTCC‑GCCCA‑‑TGTTgcc > 1:10992017‑M1/1‑137 (MQ=255) gtgCGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCCA‑‑TGTTgcc > 1:3570413‑M1/1‑137 (MQ=255) gCGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCCA‑‑TGTTgccca < 2:8577172‑M1/140‑6 (MQ=255) gCGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCCA‑‑TGTTgccca < 1:912723‑M1/140‑6 (MQ=255) cGGAAAACCAAGAAGTACAGCAGGGTAAAGCACAACCCACTGGCGATTTGTGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAAACAGACCTCC‑GCCCA‑‑TGTTgcccac < 2:2808932‑M1/140‑7 (MQ=255) ggAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCCA‑‑TGTTgcccacc < 1:9283110‑M1/140‑8 (MQ=255) gAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCCA‑‑TGTTgcccacca < 1:2003437‑M1/140‑9 (MQ=255) aaCCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCCA‑‑TGTTgcccaccacac < 2:1887472‑M1/140‑12 (MQ=255) cGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCACTCAGACCTCC‑GCCCA‑‑TGTTgcccaccacacccaag > 1:10852752‑M1/1‑124 (MQ=255) cagTACATCAGGTTAAAGCACAACCCAATCGCGATTTCGGTCCGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTATGCGGTAACACCTAGTCAATCAGACCTCCTC‑CCA‑‑TGTTgcccaccacaccaaagag < 2:9087159‑M1/139‑19 (MQ=255) attacAGCAGGGTAAATCACAACCCAATGGCGATTTTGGTAATCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCCT‑‑TGTTgcccaccacaccaaagaga < 2:10648228‑M1/138‑20 (MQ=255) tACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAATCCTAGTCAATCAGACCTCC‑GACCA‑‑TGTTgcccaccacaccaatgagatc > 2:8822777‑M1/1‑119 (MQ=255) cagcagGGTAAAGCACAACCCACTGGCGATTTGGGTCAGCAACATATCCGCGTGGTTGCTGAACATCGGGATCCAGGTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCCA‑‑TGTTgcccaccacaccaaagagataca < 2:1993805‑M1/140‑24 (MQ=255) cagGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCCA‑‑TGTTgcccaccacaccaaagagatacatta > 1:9413516‑M1/1‑114 (MQ=255) ggTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTACAACCTAGTCAATCAGACCTCC‑GCCCA‑‑TGTTgcacaccacaccaaagagatacattacgg > 2:5996350‑M1/1‑111 (MQ=255) ggTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCCA‑‑TGTTgcccaccacaccaaagagatacattacgg > 2:3191218‑M1/1‑111 (MQ=255) ggTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCCA‑‑TGTTgcccaccacaccaaagagatacattacgg > 1:2580317‑M1/1‑111 (MQ=255) ggTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCCA‑‑TGTTgcccaccacaccaaagagatacattacgg > 2:9342012‑M1/1‑111 (MQ=255) tAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCCA‑‑TGTTgcccaccacaccaaagagatacattacggtc > 2:6835843‑M1/1‑109 (MQ=255) tAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCCA‑‑TGTTgcccaccacaccaaagagatacattacggtc > 1:3859005‑M1/1‑109 (MQ=255) tAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCCA‑‑TGTTgcccaccacaccaaagagatacattacggtc > 1:8525465‑M1/1‑109 (MQ=255) tAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCCA‑‑TGTTgcccaccacaccaaagagatacattacggtc > 1:1249474‑M1/1‑109 (MQ=255) tAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCCA‑‑TGTTgcccaccacaccaaagagatacattacggtc > 1:8207286‑M1/1‑109 (MQ=255) tAAAGCACAACCCAATGGCGAGTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGGAAATCCTAGTCAATCAGACCTCC‑GCCCA‑‑TGTTgcccaccacaccacagagttacattacggtc > 2:4557016‑M1/1‑109 (MQ=255) aGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGTACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCCA‑‑TGTTgcccaccacaccactgagatacattacggtcgac > 2:9544041‑M1/1‑106 (MQ=255) aGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCCA‑‑TGTTgcccaccacaccaaagagatacattacggtcgac > 2:1009770‑M1/1‑106 (MQ=255) aGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCCA‑‑TGTTgcccaccacaccaaagagatacattacggtcgac > 1:4799148‑M1/1‑106 (MQ=255) aGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCCA‑‑TGTTgcccaccacaccaaagagatacattacggtcgac > 2:1366951‑M1/1‑106 (MQ=255) aaCCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCCA‑‑TGTTgcccaccacaccaaagagatacattacggtcgacattga > 2:7928160‑M1/1‑101 (MQ=255) aaCCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCCA‑‑TGTTgcccaccacaccaaagagatacattacggtcgacattga > 1:9913531‑M1/1‑101 (MQ=255) aaCCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCCA‑‑TGTTgcccaccacaccaaagagatacattacggtcgacattga > 1:7559369‑M1/1‑101 (MQ=255) aaCCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCCA‑‑TGATgcccaccacaccaaagagatacattacggtcgacattga > 1:4992140‑M1/1‑101 (MQ=255) aCCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCCA‑‑TGTTgcccaccacaccaaagagatacattacggtcgacattgag < 2:3901514‑M1/140‑41 (MQ=255) aCCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCCA‑‑TGTTgcccaccacaccaaagagatacattacggtcgacattgag < 2:4905540‑M1/140‑41 (MQ=255) cccAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCCA‑‑TGTTgcccaccacaccaaagagatacattacggtcgacattgagg > 2:10394944‑M1/1‑99 (MQ=255) cccAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCCA‑‑TGTTgcccaccacaccaaagagatacattacggtcgacattgagg > 1:548030‑M1/1‑99 (MQ=255) aaTGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCCA‑‑TGTTgcccaccacaccaaagagatacattacggtcgacattgaggccg > 1:1815946‑M1/1‑96 (MQ=255) aaTGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCCA‑‑TGTTgcccaccacaccaaagagatacattacggtcgacattgaggccg < 2:8461417‑M1/140‑45 (MQ=255) aaTGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCCA‑‑TGTTgcccaccacaccaaagagatacattacggtcgacattgaggccg > 1:5221982‑M1/1‑96 (MQ=255) tGGCGATTTGGGTCAGCCTCATATCCGCGTGGTTGCTGAACCTCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCCA‑‑TGTTgcccaccacacccaagagatacattacggtcgacattgaggccgcc > 2:3032611‑M1/1‑94 (MQ=255) tGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCCA‑‑TGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgcc > 2:8100484‑M1/1‑94 (MQ=255) cGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCCA‑‑TGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagc < 1:10506575‑M1/140‑50 (MQ=255) cGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCCA‑‑TGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagc > 1:4637996‑M1/1‑91 (MQ=255) cGATTTGGGTCAGCATCATATCCGCGTGGTTGCGGAACATCGGGATCCAGGTGTGCGGTAAACCCGAGTCAATCAGACCTCC‑GCCCA‑‑TGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagc < 2:8342241‑M1/140‑50 (MQ=255) cGAGTTGGGTCAGCATCATATCCGCGTGGTTGCGGAACATCGGGATCCAGTCTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCCA‑‑TGTGgcccaccacaccaaagagatacattacggtcgacattgaggccgccagc < 2:7053191‑M1/140‑50 (MQ=255) cGAGTTGGGTCAGCATCATATCCGCGTGGTAGCTGACCATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCCA‑‑TGGTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagc < 1:3400081‑M1/140‑50 (MQ=255) aTTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGGAAAACCTAGTCAATCAGACCTCC‑GCCCA‑‑TGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcac > 1:6723157‑M1/1‑89 (MQ=255) tttGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCCA‑‑TGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacg < 2:3419600‑M1/140‑53 (MQ=255) tttGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCCA‑‑TGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacg < 1:6045394‑M1/140‑53 (MQ=255) tttGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCCA‑‑TGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacg > 1:5812263‑M1/1‑88 (MQ=255) ggTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCCA‑‑TGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgt < 1:9631500‑M1/140‑57 (MQ=255) ggTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCCA‑‑TGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgt < 2:1207296‑M1/140‑57 (MQ=255) cAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCCA‑‑TGTTgcccaccacaccaaagagatacattacggtcgacagtgaggccgccagcacggcgtgta < 2:5458601‑M1/140‑60 (MQ=255) gcgTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCCA‑‑TGTTgcccaccacaccacagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaa > 1:11250735‑M1/1‑68 (MQ=255) gcgTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCCA‑‑TGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaa > 1:8673408‑M1/1‑68 (MQ=255) cgTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCCA‑‑TGTTgcccaccacacccaagagagacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaac > 2:3669267‑M1/1‑67 (MQ=255) cgTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCCA‑‑TGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaac > 1:6593749‑M1/1‑67 (MQ=255) cgTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCCA‑‑TGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaac > 1:8006255‑M1/1‑67 (MQ=255) gTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCCA‑‑TGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacg < 1:4524366‑M1/140‑75 (MQ=255) gTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCCA‑‑TGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacg > 1:6292438‑M1/1‑66 (MQ=255) gTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCCA‑‑TGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacg < 2:2312169‑M1/140‑75 (MQ=255) gTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCCA‑‑TGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtg > 1:2657777‑M1/1‑63 (MQ=255) gTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCCA‑‑TGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtg > 2:2604166‑M1/1‑63 (MQ=255) gTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCCA‑‑TGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtg < 1:890279‑M1/140‑78 (MQ=255) aaCATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCCA‑‑TGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaa > 2:4398068‑M1/1‑56 (MQ=255) aaCATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCCA‑‑TGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaa < 1:4166442‑M1/140‑85 (MQ=255) tCGGTATCAAGTTTTGCGGTAAAACCTAGTCAATCATACATCC‑G‑CAAATTTTTCCCACA‑ACACCAAAGAGAAACATTACTTACTACATTTATGCCGCCAGCACGTCGTGTAACGCAAACAGCAACGGTGAAATTAACAgg > 2:2152235/1‑140 (MQ=255) tCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCCA‑‑TGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacagg > 2:5758530‑M1/1‑52 (MQ=255) tCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCCA‑‑TGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacagg < 1:2193691‑M1/140‑89 (MQ=255) tCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCCA‑‑TGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacagg > 1:3049671‑M1/1‑52 (MQ=255) tCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCCA‑‑TGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacagg > 1:11104835‑M1/1‑52 (MQ=255) cgtgatcCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCCA‑‑TTTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacagga < 2:6280356‑M1/137‑90 (MQ=255) ggATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCCA‑‑TGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacaggaag > 1:3288458‑M1/1‑49 (MQ=255) gATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCCA‑‑TGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacaggaagg > 1:6956663‑M1/1‑48 (MQ=255) tCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCCA‑‑TGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacaggaaggta > 2:6158579‑M1/1‑46 (MQ=255) tCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCCA‑‑TGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacaggaaggta < 1:1598005‑M1/140‑95 (MQ=255) aGTTTTGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCCA‑‑TGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacaggaaggtaaat > 1:2940903‑M1/1‑43 (MQ=255) ttttGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCCA‑‑TGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacaggaaggtaaattc > 1:7835237‑M1/1‑41 (MQ=255) tGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCCA‑‑TGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacg > 2:431330‑M1/1‑38 (MQ=255) tGCGGTAAAACCTAGTCAATCAGACCTCC‑GCCCA‑‑TGTTgcccaccacacaatagagattcattacggtcgacattgaggccgccagcacggcgtgtacctcaaacagcaaaggtgaaatgaacaggaaggtaaattccat < 2:5104349‑M1/140‑103 (MQ=255) ggCGGTAAAACCTAGTCAATAAGACCTCC‑GCCCA‑‑TGTTGCCCCCGACACCAATGAGAGACCTTACGGTGGAGGTTGAGGCCGCCAGCACGGCGGGTACCGGGCACCGCAACGGTGTACTGAACAGGGAGGTCAATTcagg > 2:7414129/2‑137 (MQ=255) ggTAAAACCTAGTCAATCAGACCTCC‑GCCCA‑‑TGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacaggaaggtaaattccagcgg < 2:6337358‑M1/140‑106 (MQ=255) aaCCTAGTCAATCAGACCTCC‑GCCCA‑‑TGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaccaggaaggtaaattccagcggttcgg < 1:408051‑M1/140‑111 (MQ=255) aaCCTAGTCAATCAGACCTCC‑GCCCA‑‑TGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacaggaaggtaaattccagcggttcgg < 1:4426183‑M1/140‑111 (MQ=255) tAGTCAATCAGACCTCC‑GCCCA‑‑TGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacaggaaggtaaattccagcggttcggtaat < 1:5579943‑M1/140‑115 (MQ=255) aGTCAATCAGACCTCC‑GCCCA‑‑TGTTgcccaccacacccaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacaggaaggtaaattccagcggtgcggtcatt > 2:6572649‑M1/1‑25 (MQ=255) aGTCAATCAGACCTCC‑GCCCA‑‑TGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgatatgaacaggaaggtaaattccagcggttcggtaatt < 2:4123077‑M1/140‑116 (MQ=255) tCAATCAGACCTCC‑GCCCA‑‑TGTTgcccaccacaccaaagagatacatgacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacaggaaggtaacgtccagcggttcggtaattcc < 2:7305375‑M1/140‑118 (MQ=255) aTCAGACCTCC‑GCCCA‑‑TGGTgcccaccacaccaaagagatacattccggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacaggaaggtaaagtccagcggttcggtaattcccac < 2:11052967‑M1/140‑121 (MQ=255) ccctCC‑GCCCA‑‑TGGTgcccaccacacccaagagatacattacggtcgaccttgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacaggaaggtaaattccagcggttcggtaattcccaccagca < 2:10746533‑M1/139‑126 (MQ=255) aCCTCC‑GCCCA‑‑TGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacaggaaggtaaattccagcggttcggtaattcccaccagca < 1:10024926‑M1/140‑126 (MQ=255) cTCC‑GCCCA‑‑TGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacaggaaggtaaattccagcggttcggtaattcccaccagcatg < 2:11256905‑M1/140‑128 (MQ=255) ccgccca‑‑tgtTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacaggaaggtaaattccagcggttcggtaattcccaccagcatggc > 1:28592‑M1/5‑11 (MQ=255) cgccca‑‑tgTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacaggaaggtacattccagcggttcggtaattcccaccagcatggcg > 2:7553250‑M1/4‑10 (MQ=255) ccca‑‑TGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacaggaaggtaaattccagcggttcggtaattcccaccagcatggcggt < 2:4490834‑M1/139‑133 (MQ=255) ccca‑‑TGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacaggaaggtaaattccagcggttcggtaattcccaccagcatggcggt < 2:3334143‑M1/139‑133 (MQ=255) ccA‑‑TGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacaggaaggtaaattccagcggttcggtaattcccaccagcatggcggtt < 1:7194199‑M1/140‑134 (MQ=255) ccA‑‑TGTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacaggaaggtaaattccagcggttcggtaattcccaccagcatggcggtt < 1:3109187‑M1/140‑134 (MQ=255) gTTgcccaccacaccaaagagatacattacggtcgacattgaggccgccagcacggcgtgtaccgcaaacagcaacggtgaaatgaacaggaaggtaaattccagcggttcggtaattcccaccagcatggcggttaagg > 1:1028093‑M1/1‑3 (MQ=255) | AGTGTGCGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACTTAGTCAATCAGACCTCC‑G‑CCA‑‑TGTT‑‑CACC‑ACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGCGGTTAAGG > NZ_CP025268/3864306‑3864578 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |