BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NZ_CP025268	1292725 =	682 (1.020)	190 (0.340)	60/234	3.2	37.0%	intergenic (+182/+2)	narI/CXP41_RS06830	respiratory nitrate reductase subunit gamma/RtT sRNA
*	?	NZ_CP025268	= 1293258	69 (0.120)	190 (0.340)	60/234	3.2	37.0%	intergenic (‑44/+3)	CXP41_RS06840/CXP41_RS06845	RtT sRNA/tRNA‑Tyr
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 174 total aligned reads displayed.

TCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGCCGAACCTTAATCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTGGGGGAAGGA  >  NZ_CP025268/1293119‑1293396

 cGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCAAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTg                                                                                                                                           <  1:4343417/140‑1 (MQ=255)

 cGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTACCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTg                                                                                                                                           >  2:3339931/1‑140 (MQ=255)

  gCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGa                                                                                                                                          <  1:8235978/140‑1 (MQ=255)

  gCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGa                                                                                                                                          <  1:3371610/140‑1 (MQ=255)

  gCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGa                                                                                                                                          <  1:1712903/140‑1 (MQ=255)

  gCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGa                                                                                                                                          <  2:2970632/140‑1 (MQ=255)

  gCCCTGCGGGTCGTTGCCTGCGGCAACGCCCTCTCGCTGCCGCTCGAGCCGACCCTGAGTCGAAGCTTCTCATCCGTCCCCGCAGGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGa                                                                                                                                          <  2:7897567/140‑1 (MQ=11)

    ccTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGAtg                                                                                                                                        <  1:6247039/140‑1 (MQ=255)

    ccTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGAtg                                                                                                                                        <  1:8840187/140‑1 (MQ=255)

       tCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTCGTCGAAGCTTCTCATCCTTCCCCGCTTGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGAtggtg                                                                                                                                     <  2:1208852/140‑1 (MQ=255)

        cGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGTCGCTCTAGCCGAACCTTTGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGAtggtgg                                                                                                                                    <  1:1150142/140‑1 (MQ=255)

        cGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTCGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGATTGAGAGTTCAGGGACTTTTGAAAGTGAtggtgg                                                                                                                                    <  1:2264208/140‑1 (MQ=255)

         gggTCGTTGCCTGCGGCAACGCTCTCTCGCTGTCGCTCAAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGACTTCAGGGTCTTTTGAAAGTGAtggtggt                                                                                                                                   <  2:8091526/140‑1 (MQ=11)

         gggTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGAtggtggt                                                                                                                                   <  1:5727979/140‑1 (MQ=255)

         gggTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGAtggtggt                                                                                                                                   <  1:7983619/140‑1 (MQ=255)

         gggTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGAtggtggt                                                                                                                                   <  1:5856377/140‑1 (MQ=255)

         gggTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGAtggtggt                                                                                                                                   <  1:346771/140‑1 (MQ=255)

          ggTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCTAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCTTGGGCAGAATATTTTATTGCGGATTCGTTTGTCAGTTCAGGGTCTTTTGAAAGTGAtggtggtg                                                                                                                                  <  1:748150/140‑1 (MQ=11)

            tCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTggg                                                                                                                                <  1:1052168/140‑1 (MQ=255)

            tCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTggg                                                                                                                                <  2:7017623/140‑1 (MQ=255)

            tCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGCGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTggg                                                                                                                                <  1:8448261/140‑1 (MQ=255)

            tCGTTGCCTGCCGCAACGCACTCTCGCAGACGCTCGCGCCGAACCTTCGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGATTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTggg                                                                                                                                <  1:11199948/140‑1 (MQ=11)

              ggtGCCTGCGGCAACGCTCTCTCGCTGCCGCTCGAGACGAACCTGTGTCTAAGCTTCTCATCCGTACCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTggggg                                                                                                                              <  2:9672135/138‑1 (MQ=11)

              ggtGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTATTTCGAAGCTTCTCAACCTTCACCGCCTGGGCAGAATATTTGATTGCGGATTAGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTggggg                                                                                                                              <  2:6518462/138‑1 (MQ=11)

              gTTGCCTGCGGCAACGCTCTCTCGCTGTCGCTCGAGGCGAACCTTATTCGAAGCTTATCATCCTTCCCCGCATGGGAAGAATATTTGTTTGCGGATTAGCTTTAGAGTTCAGTGACTTTTGAAAGTGATGGTGGTggggg                                                                                                                              <  1:11150464/140‑1 (MQ=11)

              gTTGCCTGCGGCAACGCTCTCTCGCTGTCGCTCGAGCCGAACCTTTGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTggggg                                                                                                                              <  1:3627527/140‑1 (MQ=255)

              gTTGCCTGCGGCAACGCTCTCTCGCTGCCGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGATTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTggggg                                                                                                                              <  1:9981781/140‑1 (MQ=255)

              gTTGCCTGCGGCAACGCTCTCTCGCTGCCGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCGTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTggggg                                                                                                                              <  1:4933316/140‑1 (MQ=255)

              gTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGCGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTggggg                                                                                                                              <  2:9450727/140‑1 (MQ=255)

              gTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTTGTCGTAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGTAAGTGATGGTGGTggggg                                                                                                                              <  2:3626892/140‑1 (MQ=11)

              gTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTggggg                                                                                                                              <  2:6270428/140‑1 (MQ=255)

              gTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTggggg                                                                                                                              <  2:907164/140‑1 (MQ=255)

              gTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTggggg                                                                                                                              <  1:9005208/140‑1 (MQ=255)

              gTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTggggg                                                                                                                              <  1:10760293/140‑1 (MQ=255)

              gTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTggggg                                                                                                                              <  1:69481/140‑1 (MQ=255)

              gTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTggggg                                                                                                                              <  1:10838345/140‑1 (MQ=255)

              gTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTggggg                                                                                                                              <  1:11029700/140‑1 (MQ=255)

              gTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTggggg                                                                                                                              <  1:9874706/140‑1 (MQ=255)

              gTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTggggg                                                                                                                              <  1:3986440/140‑1 (MQ=255)

              gTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTggggg                                                                                                                              >  2:10760293/1‑140 (MQ=255)

              gTTGCCTGCGGCAACGCTCTCTCGCTGAAGGTCGAGCCGAACCTTAGTCGAAGCTTCTCAACCTTCCCCGCATGGGCATACTATTTGATTGCGGATGCGCGTGAGCGTTCAGGGACTGTTGTTTGTGTTGGTGGTggggg                                                                                                                              >  2:8740476/1‑140 (MQ=11)

              gTTGCCTGCGGCAACGCTCTCTCGCAGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGACTATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTggggg                                                                                                                              <  1:642603/140‑1 (MQ=255)

                tGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGCCGAACCTTCGTCGAAGCTTCTCATCCTTCCCCGCATGGGGAGTCTATTTGTTTGCGGATTCGGTGGAGAGTTCGGGGACGTGTGAAAGTGAGGGTggggggggga                                                                                                                            >  2:10318604/1‑138 (MQ=11)

                tGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGATAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGaa                                                                                                                            >  2:8545914/1‑140 (MQ=255)

                 gCCTGCGGCAACGCTCTCTCGCGGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAg                                                                                                                           <  1:9821087/140‑1 (MQ=255)

                   cTGCGGCTACGGTCTCTCGGTGAGGCTCGAGCCTAACCTTTGTCGTATGTTCTCCTCCGTCCCCGCTTGGGCATATTATTTGATTGCGGATTCGCTTGAGAGTTCTTGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGa                                                                                                                         <  1:5063071/140‑1 (MQ=2)

                   cTGCGGCACCGCTCTCTCGCTGACGCTCCAGCCGAACCTTCGTCGAAGCTTCACATCCTTCCCCGCAGGGGCAGATTATTTGATTCCGGATGCGTTAGAGCGTTCCGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGa                                                                                                                         <  2:6344872/140‑1 (MQ=11)

                   cTGCGGCAACGCTCTCTCGCTGTCGCTCTAGTCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGa                                                                                                                         <  2:10595092/140‑1 (MQ=255)

                   cTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCTTGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGa                                                                                                                         <  2:3912496/140‑1 (MQ=255)

                   cTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCATAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGa                                                                                                                         <  2:1130205/140‑1 (MQ=255)

                   cTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGATTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGa                                                                                                                         <  2:7503949/140‑1 (MQ=255)

                   cTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCGTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGa                                                                                                                         <  1:7706844/140‑1 (MQ=255)

                   cTGCGGCAACGCTCTCTCGCTGACGCTCGACCCTAACCTTAGGCGAAGCTTCTCATCCTTCCCCGCTGGGGCAGAATATTTGATTGCGGTTTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGa                                                                                                                         <  1:2040343/140‑1 (MQ=11)

                        gCAACGCTCTCTCGCTGTCGCTCGAGCCGAACCTTCGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGAttact                                                                                                                    <  2:6018345/140‑4 (MQ=255)

                        gCAACGCTCTCTCGCTGACGCTCGTGCAGCACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGAttact                                                                                                                    <  1:11114994/140‑4 (MQ=11)

                        gCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGAttact                                                                                                                    <  1:6046619/140‑4 (MQ=255)

                        gCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCGTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGAttact                                                                                                                    <  1:7559721/140‑4 (MQ=255)

                            cGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTggggg                                                                                                                              <  2:5061637/126‑1 (MQ=255)

                            cGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTggggg                                                                                                                              >  1:5061637/1‑126 (MQ=255)

                            cGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATGCGGTTGAGAGTTCAGGGAAGTTTGAAAGTGATGGTGGTGGGGGAAGGAttagtcaga                                                                                                                >  2:2619439/1‑133 (MQ=11)

                               cctctcGCTGGCGCTCAAGTCGAACCTTGGTCGAAGCTTCTCATCCGTCCCCGCTTGGGCAGAATTTTTTATTGCGGATTCGTTTGTTACTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCg                                                                                                             <  2:6676208/139‑1 (MQ=14)

                                        ggCGCTCGAGTCGTACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGCCAGAATATTTTATTGCGGATTCGTTGGGGAGTTCAGGGACTTTTGATAGTGATGGTGGTGGGGGTAGGATTCGAAACTTCGAAGTCGATg                                                                                                    >  1:872575/1‑140 (MQ=14)

                                        ggCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCAGGGGCAGAATATTTAATTGCGGATTCGGTGGGAAGTTCAGGGACTGTTGATAGGGATGGTGGTGGGGGAAGGATTCGAACCGTCGAAGTCGATg                                                                                                    >  2:2394951/1‑140 (MQ=11)

                                            cTCCAGTCGACCCTTGGTCGTAGCGTCTCAACCGTCCCCGCCTGGGCATACTACTTAATTTGGGATTCGTTGGCACGTTCCGGGACTTTAGCAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACgg                                                                                                <  1:335082/140‑1 (MQ=9)

                                              cctgtcGAACCTTGTTCTAAGCTTCTCAACCTTACACGCTTGGGCAGAATTTTTAATTGCGGAGTCGTTACGCAGTTCACGGAAATTTGCAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCa                                                                                              <  1:940614/135‑1 (MQ=9)

                                              cGAGGCGAACATCAGTCGAAGATGCTGATCCTTCCCCGCATGGGCTGTATATTTGATTGCGTATTCGCTTGGGAGTTCAGGGACTGTTGATAGTTATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCa                                                                                              <  2:1326599/140‑1 (MQ=18)

                                                           ggtCGTAGCTTCTCATCCTTCCCCGCCTGGGCTGTCTATTTAATTGCTGATTCGTTTTGAATTTCAGTGTCTTTTGTTAGTTATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTg                                                                                 <  1:2630520/138‑1 (MQ=17)

                                                                            cgtCCCCGCATGGGCAGAATCTGTGATTGCGGAGTCGCTTGTCAGGTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATGTACAGTCTGCTCCCTTTGGCCGCTCg                                                                <  2:10414233/138‑1 (MQ=21)

                                                                                       gggCAGAATATTTGAGTGCGGATTCGTTGGTGACTTCCGGGGCTTTTGACAGTGAGGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCccacc                                                     <  1:10004764/140‑1 (MQ=17)

                                                                                                         cGGATTCGCTTGAGATTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGACGATGACGGAAGATTTACAGTCTGCTCCCTTTGGCCGCTCGCGAACCCCACCAGGGGTAATTAAAAtttt                                   >  2:10489763/1‑140 (MQ=21)

                                                                                                             ttCGTTTGTTAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAgg                               <  2:3146283/140‑1 (MQ=255)

                                                                                                                 ttgggaagTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAAt                           <  2:1383646/134‑1 (MQ=255)

                                                                                                                    gttagTTCAGGGTCTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCt                        <  2:3867134/137‑1 (MQ=255)

                                                                                                                    ggaagTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCt                        <  1:2399161/137‑1 (MQ=255)

                                                                                                                    ggaagTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCt                        <  2:1454903/137‑1 (MQ=255)

                                                                                                                    ggaagTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCt                        <  2:1001222/137‑1 (MQ=255)

                                                                                                                     gaagTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCtt                       <  1:6361502/138‑1 (MQ=255)

                                                                                                                      tagTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTNGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTg                      <  1:10489763/139‑1 (MQ=255)

                                                                                                                         ttCAGGGCCTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCATATTTTGAGGTAATGCTTgaga                   <  1:150937/140‑1 (MQ=255)

                                                                                                                         ttCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTgaga                   <  1:1327906/140‑1 (MQ=255)

                                                                                                                         ttCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTgaga                   <  2:3766430/140‑1 (MQ=255)

                                                                                                                         ttCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTgaga                   <  1:4110575/140‑1 (MQ=255)

                                                                                                                         ttCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTgaga                   <  1:7560571/140‑1 (MQ=255)

                                                                                                                          tccggggCTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCATCGAAGACGATGACGGCAGATTTACAGTCTGCTCCCTTAGGACGCTCGGGAACCCAACCAGCGGTCATTCAAATTTTGAGGTCATGCTTgagct                  >  2:11230828/4‑138 (MQ=18)

                                                                                                                          tccgggACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGAt                  <  1:9047400/137‑1 (MQ=255)

                                                                                                                          tCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGAt                  <  1:9523851/140‑1 (MQ=255)

                                                                                                                          tCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGAt                  <  1:10615260/140‑1 (MQ=255)

                                                                                                                           ccgggTCTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATTACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGAtg                 <  1:897582/138‑1 (MQ=255)

                                                                                                                           cAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGAtg                 <  2:5887673/140‑1 (MQ=255)

                                                                                                                           cAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGAtg                 <  1:948432/140‑1 (MQ=255)

                                                                                                                               gACTTTTGCAAGTGATGGTGGTGGGTGACGGACTCGAACCTTCGAAGTCGATGACTGCAGCTATACAGTCTGCTCGCTGTGGCAGCTCGGTAACCCCACCAGGCGTAATTCATATTTTGAGGTAATGCTTGAGAtggtgg             <  2:2641487/140‑1 (MQ=21)

                                                                                                                               gACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGAtggtgg             <  1:10568183/140‑1 (MQ=255)

                                                                                                                                   tttGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTggg         >  2:2770539/1‑140 (MQ=255)

                                                                                                                                   tttGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTggg         >  1:11153623/1‑140 (MQ=255)

                                                                                                                                     tGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTCCAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTggggg       <  1:2853879/140‑1 (MQ=255)

                                                                                                                                     tGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTggggg       <  2:4320897/140‑1 (MQ=255)

                                                                                                                                     tGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTggggg       <  1:7388679/140‑1 (MQ=255)

                                                                                                                                      gAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGTCAGTTTTACAGTCTTCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTGGGGGa      <  1:10313819/140‑1 (MQ=255)

                                                                                                                                       caaGTGAAGCTGGGGGGGGAAGGCTTCGATCCTTCGTAGTCGATGACGTCAGATTTACAGTCTGCTCCCTTTGGCCGCTCTGGAACCCCACCATGGGTAATTGAAATGTTGTGGTATTGCTTGTGATGGTGGTGGGGGaa     <  2:7982967/139‑1 (MQ=17)

                                                                                                                                       aaaGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTGGGGGaa     <  1:10084707/140‑1 (MQ=255)

TCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGCCGAACCTTAATCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTGGGGGAAGGA  >  NZ_CP025268/1293119‑1293396

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.