| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 4,621,385 | 0 | C | T | 49.7% | 251.2 / inf | 1740 | A414V (GCG→GTG) | deoA | thymidine phosphorylase |
| Reads supporting (aligned to +/- strand): ref base C (646/225); new base T (653/207); total (1306/434) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.05e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.63e-01 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 1783 total aligned reads displayed.
GCGGACGCCGTCAGGCATCTGACACCATCGATTACAGCGTCGGCTTTACTGATATGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAACTGGCAGGAAGCGGCGAAAGCGGCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCAGCGAATAACGGTATACTGATCTGATCATTTAAATTTGAAGCACTGAGTACGGAGAACATATGAAACGTGCATT > NZ_CP025268/4621247‑4621523 | cggACGCCGTCAGGCATCTGACACCATCGATTACAGCGTCGGCTTTACTGATATGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAACTGGCAGGAAGCGGCGa > 2:4517411/1‑140 (MQ=255) ggACGCCGTCAGGCATCTGACACCATCGATTACAGCGTCGGCTTTACTGATATGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAACTGGCAGGAAGCGGCGAa > 2:4610343‑M2/1‑139 (MQ=255) ggACGCCGTCAGGCATCTGACACCATCGATTACAGCGTCGGCTTTACTGATATGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAACTGGCAGGAAGCGGCGAa > 2:7873828‑M2/1‑139 (MQ=255) aCGCCGTCAGGCATCTGACACCATCGAGTACAGCGTCGGCTTTACTGATATGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACCACTGGCAGGAAGCGGCGAaag < 1:4619157‑M2/140‑4 (MQ=255) catctgacaccatcgattacagcgtcggctttactgatatggcgcgtctgggcgaccaggtagacggtcagcgtccgctggcggttatccacgcgaaagacgaaaacaactggcaggaagcggcgaaagcggtgaaagcg > 2:2666834‑M1/127‑140 (MQ=255) ctgacaccatcgattacagcgtcggctttactgatatggcgcgtctgggcgaccaggtagacggtcagcgtccgctggcggttatccacgcgaaagacgaaaacaactggcaggaagcggcgaAAGCGGTGAAAGCGGCa < 1:3600794‑M1/17‑1 (MQ=255) gCATCTGACACCATCGATTACAGCGTCGGCTTTACTGATATGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAACTGGCAGGAAGCGGCGAaagcggtgaaagc > 1:10395820‑M2/1‑127 (MQ=255) ccatcgattacagcgtcggctttactgatatggcgcgtctgggcgaccaggtagacggtcagcgtccgctggcggttatccacgcgaaagacgaaaacaactggcaggaagcggcgaAAGCGGTGAAAGCGGCAATTaaa > 2:6634069‑M1/118‑140 (MQ=255) cATCTGACACCATCGATTACAGCGTCGGCTTTACTGATATGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAACTGGCAGGAAGCGGCGAaagcggtgaaagcg > 1:5874524‑M2/1‑126 (MQ=255) atcgattacagcgtcggctttactgatatggcgcgtctgggcgaccaggtagacggtcagcgtccgctggcggttatccacgcgaaagacgaaaacaactggcaggaagcggcgaAAGCGGTGAAAGCGGCAATTAAACt < 2:7195495‑M1/25‑1 (MQ=255) gATTACAGCGTCGGCTTTACTGATATGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAACTGGCAGGAAGCGGCGAaagcggtgaaagcggcaattaaacttgc > 2:10576631‑M2/1‑112 (MQ=255) tcggctttactgatatggcgcgtctgggcgaccaggtagacggtcagcgtccgctggcggttatccacgcgaaagacgaaaacaactggcaggacgcggcgaAAGCGGTGAAAGCGGCAATTAAACTTGCCGATAAAGCa < 2:3718983‑M1/38‑1 (MQ=255) ggctttactgatatggcgcgtctgggcgaccaggtagacggtcagcgtccgctggcggttatccacgcgaaagacgaaaacaactggcaggaagcggcgaAAGCGGTGAAAGCGGCAATTAAACTTGCCGATAAAGCAcc > 1:3822119‑M1/101‑140 (MQ=255) tactgagatggcgcgtctgggcgaccaggtagacggtcagcgtccgctggcggttatccacgcgaaagacgaaaacaactggcaggaagcggcgtAAGCGGTGAAAGCGGCAATTAAACTTGCCGATAAAGCACCGGaaa < 2:5426633‑M1/45‑1 (MQ=255) actgatatggcgcgtctgggcgaccaggtagacggtcagcgtccgctggcggttatccacgcgaaagacgaaaacaactggcaggaagcggcgaAAGCGGTGAAAGCGGCAATTAAACTTGCCGATAAAGCACCGGAAAg < 1:1151210‑M1/46‑1 (MQ=255) tgatatggcgcgtctgggcgaccaggtagacggtcagcgtccgctggcggttatccacgcgaaagacgaaaacaactggcaggaagcggcgaAAGCGGTGAAAGCGGCAATTAAACTTGCCGATAAAGCACCGGAAAGca > 2:1625952‑M1/93‑140 (MQ=255) gCTTTACTGATATGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAACTGGCAGGAAGCGGCGAaagcggtgaaagcggcaattaaacttgccgataaagcaccg < 2:1015922‑M2/140‑42 (MQ=255) ttACTGATATGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAACTGGCAGGAAGCGGCGAaagcggtgaaagcggcaattaaacttgccgataaagcaccggaa > 1:3399783‑M2/1‑96 (MQ=255) ggcgcgtctgggcgaccaggtagacggtcagcgtccgctggcggttatccacgcgaaagacgaaaacaactggcaggaagcggcgaAAGCGGTGAAAGCGGCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCaa > 1:1436635‑M1/87‑140 (MQ=255) ggcgcgtctgggcgaccaggtagacggtcagcgtccgctggcggttatccacgcgaaagacgaaaacaactggcaggaagcggcgaAAGCGGTGAAAGCGGCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCaa > 1:3680876‑M1/87‑140 (MQ=255) gcgcgtctgggcgaccaggtagacggtcagcgtccgctggcggttatccacgcgaaagacgaaaacaactggcaggaagcggcgaAAGCGGTGAAAGCGGCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAAc < 2:9163818‑M1/55‑1 (MQ=255) aCTGATATGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAACTGGCAGGAAGCGGCGAaagcggtgaaagcggcaattaaacttgccgataaagcaccggaaag > 1:7306347‑M2/1‑94 (MQ=255) cgcgtctgggcgaccaggtagacggtcagcgtccgctggcggttatccacgcgaaagacgaaaacaactggcaggaagcggcgaAAGCGGTGAAAGCGGCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACt > 1:8207140‑M1/85‑140 (MQ=255) tctgggcgaccaggtagacggtcagcgtccgctggcggttatccacgcgaaagacgaaaacaactggcaggaagcggcgaAAGCGGTGAAAGCGGCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCt > 1:10008471‑M1/81‑140 (MQ=255) tgggcgacccggtagacggacagcgtccgctggcggttatccacgcgcaagacgaaaacaactggcaggaagcggcgaAAGCGGTGAAAGCGGCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTAt > 2:6222892‑M1/79‑140 (MQ=255) tgggcgaccaggtagacggtcagcgtccgctggcggttatccacgcgaaagacgaaaacaactggcaggaagcggcgaAAGCGGTGAAAGCGGCAATGAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTAt > 2:737312‑M1/79‑140 (MQ=255) ggcgaccaggtagacggtcagcgtccgctggcggttatccacgcgaaagacgaaaacaactggcaggaagcggcgaAAGCGGTGAAAGCGGCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCg > 1:2731164‑M1/77‑140 (MQ=255) cgcgTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAACTGGCAGGAAGCGGCGAaagcggtgaaagcggcaattaaacttgccgataaagcaccggaaagcacaccaact < 2:10865556‑M2/140‑57 (MQ=255) tCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAACTGGCAGGAAGCGGCGAaagcggtgaaagcggcaattaaacttgccgataaagcaccggaaagcacaccaactgtct < 1:9761905‑M2/140‑61 (MQ=255) tCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAACTGGCAGGAAGCGGCGAaagcggtgaaagcggcaattaaacttgccgataaagcaccggaaagcacaccaactgtct < 2:2417199‑M2/140‑61 (MQ=255) tCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAACTGGCAGGAAGCGGCGAaagcggtgaaagcggcaattaaacttgccgataaagcaccggaaagcacaccaactgtct > 1:9205838‑M2/1‑80 (MQ=255) tCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAACTGGCAGGAAGCGGCGAaagcggtgaaagcggcaattaaacttgccgataaagcaccggaaagcacaccaactgtct < 1:10633897‑M2/140‑61 (MQ=255) caggtagacggtcagcgtccgctggcggttatccacgcgaaagacgaaaacaactggcaggaagcggcgaAAGCGGTGAAAGCGGCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTAt > 1:9273453‑M1/71‑140 (MQ=255) tGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGCGGTTATCCACGCGACAGACGAAAACAACTGGCAGGAAGCGGCGAaagcggtgaaagcggcaattaaacttgccgataaagcaccggaaagcacaccaactctctat > 2:3222736‑M2/1‑78 (MQ=255) ggtagacggtcagcgtccgctggcggttatccacgcgaaagacgaaaacaactggcaggacgcggcgaAAGCGGTGAAAGCGGCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCa > 2:2882891‑M1/69‑140 (MQ=255) ggtagacggtcagcgtccgctggcggttatccacgcgaaagacgaaaacaactggcaggaagcggcgaAAGCGGTGAAAGCGGCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCa > 2:807809‑M1/69‑140 (MQ=255) acggtcagcgtccgctggcggttatccacgcgaaagacgaaaacaactggcaggaagcggcgaAAGCGGTGAAAGCGGCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCAGCGaa < 2:1493858‑M1/77‑1 (MQ=255) acggtcagcgtccgctggcggttatccacgcgaaagacgaaaacaactggcaggaagcggcgaAAGCGGTGAAAGCGGCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCAGCGaa > 1:5086592‑M1/64‑140 (MQ=255) acggtcagcgtccgctggcggttatccacgcgaaagacgaaaacaactggcaggaagcggcgaAAGCGGTGAAAGCGGCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCAGCGaa > 1:2551950‑M1/64‑140 (MQ=255) acggtcagcgtccgctggcggttatccacgcgaaagacgaaaacaactggcaggaagcggcgaAAGCGGTGAAAGCGGCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCAGCGaa > 2:8009252‑M1/64‑140 (MQ=255) acggtcagcgtccgctggcggttatccacgcgaaagacgaaaacaactggcaggaagcggcgaAAGCGGTGAAAGCGGCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCAGCGaa > 1:9472249‑M1/64‑140 (MQ=255) cAGGTAGACGGTCAGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAACTGGCAGGAAGCGGCGAaagcggtgaaagcggcaattaaacttgccgataaagcaccggaaagcacaccaactgtctatcgccgtat > 1:2320966‑M2/1‑70 (MQ=255) gtcagcgtccgctggcggttatccacgcgaaagacgaaaacaactggcaggaagcggcgaAAGCGGTGAAAGCGGCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCAGCGAATaa > 2:9739357‑M1/61‑140 (MQ=255) gtcagcgtccgctggcggttatccacgcgaaagacgaaaacaactggcaggaagcggcgaAAGCGGTGAAAGCGGCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCAGCGAATaa > 1:9589501‑M1/61‑140 (MQ=255) gtcagcgtccgctggcggttatccacgcgaaagacgaaaacaactggcaggaagcggcgaAAGCGGTGAAAGCGGCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCAGCGAATaa > 1:7953415‑M1/61‑140 (MQ=255) gtcagcgtccgctggcggttatccacgcgaaagacgaaaacaacgggcaggaagcggcgaAAGCGGTGAAAGCGGCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCAGCGAATaa > 2:6811312‑M1/61‑140 (MQ=255) cagcgtccgctggcggttatccacgcgaaagacgaaaacaactggcaggaagcggcgaAAGCGGTGAAAGCGGCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCAGCGAATAACg > 2:7055715‑M1/59‑140 (MQ=255) cagcgtccgctggcggttatccacgcgaaagacgaaaacaactggcaggaagcggcgaAAGCGGTGAAAGCGGCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCAGCGAATAACg > 2:3972979‑M1/59‑140 (MQ=255) cagcgtccgctggcggttatccacgcgaaagacgaaaacaactggcaggaagcggcgaAAGCGGTGAAAGCGGCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCAGCGAATAACg > 1:180053‑M1/59‑140 (MQ=255) agcgtccgctggcggttatccacgcgaaagacgaaaacaactggcaggaagcggcgaAAGCGGTGAAAGCGGCAATTAATCTTGCCGATAAAGCACCGGAAAGCACACCCACTGTCTATCGCCGTATCAGCGAATAACgg < 1:6398793‑M1/83‑1 (MQ=255) aCGGTCAGCGTCCGCTGGCGGTTATCCACTCGAAAGACGAAAACAACTGGCAGGAAGCGGCGAaagcggtgaaagcggcaattaaacttgccgataaagcaccggaaagcacaccaactgtctatcgccgtatcagcgaa > 2:11050825‑M2/1‑63 (MQ=255) aCGGTCAGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAACTGGCAGGAAGCGGCGAaagcggtgaaagcggcaattaaacttgccgataaagcaccggaaagcacaccaactgtctatcgccgtatcagcgaa < 2:8393028‑M2/140‑78 (MQ=255) aCGGTCAGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAACTGGCAGGAAGCGGCGAaagcggtgaaagcggcaattaaacttgccgataaagcaccggaaagcacaccaactgtctatcgccgtatcagcgaa > 1:6059720‑M2/1‑63 (MQ=255) aCGGTCAGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAACTGGCAGGAAGCGGCGAaagcggtgaaagcggcaattaaacttgccgataaagcaccggaaagcacaccaactgtctatcgccgtatcagcgaa > 1:5270618‑M2/1‑63 (MQ=255) aCGGTCAGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAACTGGCAGGAAGCGGCGAaagcggtgaaagcggcaattaaacttgccgataaagcaccggaaagcacaccaactgtctatcgccgtatcagcgaa > 1:11151060‑M2/1‑63 (MQ=255) aCGGTCAGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAACTGGCAGGAAGCGGCGAaagcggtgaaagcggcaattaaacttgccgataaagcaccggaaagcacaccaactgtctatcgccgtatcagcgaa > 2:7605454‑M2/1‑63 (MQ=255) ggTCAGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAACTGGCAGGAAGCGGCGAaagcggtgaaagcggcaattaaacttgccgataaagcaccggaaagcacaccaactgtctatcgccgtatcagcgaata < 1:3274251‑M2/140‑80 (MQ=255) gTCAGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAACTGGCAGGAAGCGGCGAaagcggtgaaagcggcaattaaacttgccgataaagcaccggaaagcacaccaactgtctatcgccgtatcagcgaataa > 1:6844623‑M2/1‑60 (MQ=255) tCAGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAACTGGCAGGAAGCGGCGAaagcggtgaaagcggcaattaaacttgccgataaagcaccggaaagcacaccaactgtctatcgccgtatcagcgactaac < 2:4407631‑M2/140‑82 (MQ=255) ctggcggttatccacgcgaaagacgaaaacaactggcaggaagcggcgaAAGCGGTGAAAGCGGCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCAGCGAATAACGGTATActga < 1:5517797‑M1/91‑1 (MQ=255) tggcggttatccacgcgaaagacgaaaacaactggcaggaagcggcgaAAGCGGTGAAAGCGGCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCAGCGAATAACGGTATActgat > 2:8929824‑M1/49‑140 (MQ=255) tCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAACTGGCAGGAAGCGGCGAaagcggtgaaagcggcaattaaacttgccgataaagcaccggaaagcacaccaactgtctatcgccgtatcagcgaataacggtata > 2:2114820‑M2/1‑53 (MQ=255) cGGTTATCCACGCGAAAGACGAAAACAACTGGCAGGAAGCGGCGAaagcggtgaaagcggcaattaaacttgccgataaagcaccggaaagcacaccacctgtctatcgccgtatcagcgaataacggtatactgatctg > 2:943854‑M2/1‑45 (MQ=255) gcgaaagacgaaaacaactggcaggaagcggcgaAAGCGGTGAAAGCGGCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCAGCGAATAACGGTATACTGATCTGATCATTTAAAt > 1:7599606‑M1/35‑140 (MQ=255) cACGCGAAAGCCGAAAACAACTGGCAGGAAGCGGCGAcagcggtgaaagcggcaagtcaacttgccgatacagcaccggaaagcacaccaactgtctatcgccgtatcagcgaataacggtatactgatctgatcattta > 2:3099843‑M2/1‑37 (MQ=255) acgaaatcaactggcaggaagcggcgaAAGCGGTGAAAGCGGCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCAGCGAATAACGGTATACTGATCTGATCATTTAAATTTGAAGc > 2:5782638‑M1/28‑140 (MQ=255) acgaaaacaactggcaggaagcggcgaAAGCGGTGAAAGCGTCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCAGCGAATAACGGTATACTGATCTGATCATTTAAATTTGAAGc > 2:4804794‑M1/28‑140 (MQ=255) acgaaaacaactggcaggaagcggcgaAAGCGGTGAAAGCGGCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCAGCGAATAACGGTATACTGATCTGATCATTTAAATTTGAAGc > 1:5629297‑M1/28‑140 (MQ=255) acgaaaacaactggcaggaagcggcgaAAGCGGTGAAAGCGGCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCAGCGAATAACGGTATACTGATCTGATCATTTAAATTTGAAGc > 1:8363762‑M1/28‑140 (MQ=255) acgaaaacaactggcaggaagcggcgaAAGCGGTGAAAGCGGCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCAGCGAATAACGGTATACTGATCTGATCATTTAAATTTGAAGc > 2:10375070‑M1/28‑140 (MQ=255) acgaaaacaactggcaggaagcggcgaAAGCGGTGAAAGCGGCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCAGCGAATAACGGTATACTGATCTGATCATTTAAATTTGAAGc > 1:6976231‑M1/28‑140 (MQ=255) acgaaaacaactggcaggaagcggcgaAAGCGGTGAAAGCGGCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACGGTCTATCGCCGTATCAGCGAATAACGGTATAATGATCTGATCATTTATATTTGAAGc > 2:4145593‑M1/28‑140 (MQ=255) aCGCGAAAGACGAAAACAACTGGCAGGAAGCGGCGAaagcggtgaaagcggcaattaaacttgccgataaagcaccggaaagcacaccaactgtctatcg < 1:2180894‑M2/100‑65 (MQ=255) gaaaacaactggcaggaagcggcgaAAGCGGTGAAAGCGGCAATTAAACTTGCCGATAAAGCACCGGAAAGCTCTCCAACTGTCTATCGCCGTATCAGCGAATAACGGTATACTGATCTGATCATTTAAATTTGAAGCAc > 2:1870840‑M1/26‑140 (MQ=255) gaaaacaactggcaggaagcggcgaAAGCGGTGAAAGCGGCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCAGCGAATAACGGTATACTGATCTGATCATTTAAATTTGAAGCAc > 2:4179656‑M1/26‑140 (MQ=255) gaaaacaactggcaggaagcggcgaAAGCGGTGAAAGCGGCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCAGCGAATAACGGTATACTGATCTGATCATTTAAATTTGAAGCAc > 2:3464382‑M1/26‑140 (MQ=255) gaaaacaactggcaggaagcggcgaAAGCGGTGAAAGCGGCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCAGCGAATAACGGTATACTGATCTGATCATTTAAATTTGAAGCAc > 1:2065648‑M1/26‑140 (MQ=255) aaaacaactggcaggaagcggcgaAAGCGGTGAAAGCGGCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCAGCGAATAACGGTATACTGATCTGATCATTTAAATTTGAAGCACt > 1:4784966‑M1/25‑140 (MQ=255) aaaGACGAAAACAACTGGCAGGAAGCGGCGAaagcggtgaaagcggcaattaaacttgccgataaagcaccggaaagcacaccaactgtctatcgccgtatcagcgaataacggtatactgatctgatcatttaaatttg > 2:1228369‑M2/1‑31 (MQ=255) aGACGAAAACAACTGGCAGGAAGCGGCGAaagcggtgaaagcggcaattaaacttgccgataaagcaccggaaagcacaccaactgtctatcgccgtatcagcgaataacggtatactgatctgatcatttaaatttgaa > 1:41326‑M2/1‑29 (MQ=255) aGACGAAAACAACTGGCAGGAAGCGGCGAaagcggtgaaagcggcaattaaacttgccgataaagcaccggaaagcacaccaactgtctatcgccgtatcagcgaataacggtatactgatctgatcatttaaatttgaa > 1:9024751‑M2/1‑29 (MQ=255) aCGAAAACAACTGGCAGGAAGCGGCGAaagcggtgaaagcggcaattaaacttgccgataaagcaccggaaagcacaccaactgtctatcgccgtatcagcgaataacggtatactgatctgatcatttaaatttgaagc > 2:5553442‑M2/1‑27 (MQ=255) aaaaCAACTGGCAGGAAGCGGCGAaagcggtgaaagcggcaattaaacttgccgataaagcaccggaaagcacaccaactgtctatcgccgtatcagcgaataacggtatactgatctgatcatttaaatttgaagcact > 1:10916168‑M2/1‑24 (MQ=255) aaaaCAACTGGCAGGAAGCGGCGAaagcggtgaaagcggcaattaaacttgccgataaagcaccggaaagcacaccaactgtctatcgccgtatcagcgaataacggtatactgatctgatcatttaaatttgaagcact > 2:8644073‑M2/1‑24 (MQ=255) gcaggaagcggcgaAAGCGGTGAAAGCGGCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCAGCGAATAACGGTATACTGATCTGATCATTTAAATTTGAAGCACTGAGTACGgag > 1:7494830‑M1/15‑140 (MQ=255) gcaggaagcggcgaAAGCGGTGAAAGCGGCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCAGCGAATAACGGTATACTGATCTGATCATTTAAATTTGAAGCACTGAGTACGgag > 1:7809006‑M1/15‑140 (MQ=255) gcaggaagcggcgaAAGCGGTGAAAGCGGCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCAGCGAATAACGGTATACTGATCTGATCATTTAAATTTGAAGCACTGAGTACGgag > 1:6594696‑M1/15‑140 (MQ=255) aggaagcggcgaAAGCGGTGATAGCGGCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCAGCGAATAACGGTATACTGATCTGATCATTTAAATTTGAAGCACTGAGTACGGAGaa > 1:8522217‑M1/13‑140 (MQ=255) gcggcgaAAGCGGTGAAAGCGGCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCAGCGAATAACGGTATACTGATCTGATCATTTAAATTTGAAGCACTGAGTACGGAGAACatat > 1:994315‑M1/8‑140 (MQ=255) cggcgaAAGCGGTGAAAGCGGCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCAGCGAATAACGGTATACTGATCTGATCATTTAAATTTGAAGCACTGAGTACGGAGAACATATg < 1:873512‑M1/134‑1 (MQ=255) cggcgaAAGCGGTGAAAGCGGCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCAGCGAATAACGGTATACTGATCTGATCATTTAAATTTGAAGCACTGAGTACGGAGAACATATg < 2:11266073‑M1/134‑1 (MQ=255) gCAGGAAGCGGCGAaagcggtgaaagcggcaattaaacttgccgataaagcaccggaaagcacaccaactgtctatcgccgtatcagcgaataacggtatactgatctgatcatttaaatttgaagcactgagtacggag > 1:4315319‑M2/1‑14 (MQ=255) gCAGGAAGCGGCGAaagcggtgaaagcggcaattaaacttgccgataaagaaccggaaagcacaccaactgtctatcgccgtatcagcgaataacggtatactgatctgatcatttaaatttgaagcactgagtacggag > 1:8081505‑M2/1‑14 (MQ=255) gCAGGAAGCGGCGAaagccgtgacagcggcacttaaacttgccgataaagccccggaaagcacaccaactgtctttcgccgtatcagcgaataacggtatactgatcttatcatttaaatttgaagcactgagtacggag > 2:7749850‑M2/1‑14 (MQ=255) aGGAAGCGGCGAaagcggtgaaagcggcaattaaacttgccgataaagcaccggaaagcacaccaactgtctatcgccgtatcagcgaataacggtatactgatctgatcatttaaatttgaagcactgagtacggagaa > 1:3056305‑M2/1‑12 (MQ=255) aAAGCGGTGAAAGCGGCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCAGCGAATAACGGTATACTGATCTGATCATTTAAATTTGAAGCACTGAGTACGGAGAACATATGAAACg > 1:4002541‑M1/2‑140 (MQ=255) aagcggcgaaagcggtgaaagcggaaattaaacttgccgataaatcaccggaaagcacaccaactgtctatcgccgtatcagcgaataacggtatactgatctgatcatttaaatttgaagcactgagtacggagaacat > 2:6384130‑M2/1‑9 (MQ=255) GCGGTGAAAGCGGCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCAGCGAATAACGGTATACTGATCTGATCATTTAAATTTGAAGCACTGAGTACGGAGAACATATGAAACGTGc > 1:10207757‑M1/1‑140 (MQ=255) GCGGTGAAAGCGGCAATTAAACGTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCAGCGAATAACGGGATACTGATCTGATCATTTAAATTTGAAGCACTGAGTACGGAGAACATATGAAACGTGc > 2:5147223‑M1/1‑140 (MQ=255) gcgaaagcggtgaaagcggcaattaaacttgccgataaagcaccggaaagcacaccaactgtctatcgccgtatcagcgaataacggtatactgatctgatcatttaaatttgaagcactgagtacggagaacatatgaa > 1:4487895‑M2/1‑4 (MQ=255) | GCGGACGCCGTCAGGCATCTGACACCATCGATTACAGCGTCGGCTTTACTGATATGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAACTGGCAGGAAGCGGCGAAAGCGGCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCAGCGAATAACGGTATACTGATCTGATCATTTAAATTTGAAGCACTGAGTACGGAGAACATATGAAACGTGCATT > NZ_CP025268/4621247‑4621523 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |