| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 555,940 | A→G | D284D (GAT→GAC) | folD ← | bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 555,940 | 0 | A | G | 96.2% | 2239.5 / 48.1 | 694 | D284D (GAT→GAC) | folD | bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD |
| Reads supporting (aligned to +/- strand): ref base A (11/15); new base G (266/401); total (277/417) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.40e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.81e-01 | |||||||||||
Only 100 of 696 total aligned reads displayed.
GACTTTCACCTGGCCTTCGGCAATCGCGATTTTCGCCTGCGCGCCGCTTTCGCTCCAGCCTTCCAGTTTCAGCAAGTCGCACAGCTCAACGTGCGGATGTTTACCTAAAGAAAATGTCGCCATGTTACTCATCCTGTGGATCATGATATTCAACGCACGCCTGTAGCGTGTTTTCAATCAGCGTGGCAACCGTCATCGGGCCAACGCCGCCGGGAACAGGCGTAATGTATGAGGCGCGTTTAGCCGCGTCTTCAAACACGACGTCGCCCACAACTTTG > NZ_CP025268/555801‑556078 | tCACCTGGCCTTCGGCAATCGCGATTTTCGCCTGCGCGCCGCTTTCGCTCCAGCCTTCCAGTTTCAGCAAGTCGCACAGCTCAACGTGCGGATGTTTACCTAAAGAAAATGTCGCCATGTTACTCATCCTGTGGGTCATg < 1:6531770/140‑1 (MQ=255) ccTGGCCTTCGGCAATCGCGATTTTCGCCTGCGCGCCGCTTTCGCTCCAGCCTTCCAGTTTCAGCAAGTCGCACAGCTCAACGTGCGGATGTTTACCTAAAGAAAATGTCGCCATGTTACTCATCCTGTGGGTCATGata > 1:1745277/1‑140 (MQ=255) ccTGGCCTTCGGCAATCGCGATTTTCGCCTGCGCGCCGCTTTCGCTCCAGCCGTCCAGTTTCAGCAAGTCGCACAGCTCAACGTGCGGATGTTTACCTAAAGAAAATGTCGCCATGTTACTCATCCTGTGGGTCATGata > 2:8891503/1‑140 (MQ=255) tGGCCTTCGGCAATCGCGCTTTTCGCCTGCGCGCCGCTTTCGCTCTAGCCTTCCAGTTTCAGCAAGTCGCACAGCTCAACGTGCGGATGTTTACCTAAAGAAAATGTCGCCATGTTACTCATCCTGTGGGTCATGATAtt < 2:5783391/140‑1 (MQ=255) tGGCCTTCGGCAATCGCGATTTTCGCCTGCGCGCCGCTTTCGCTCCAGCCTTCCAGTTTCAGCAAGTCGCACAGCTCAACGTGCGGATGTTTACCTAAAGAAAATGTCGCCATGTTACTCATCCTGTGGGTCATGATAtt < 1:2415974/140‑1 (MQ=255) gCCTTCGGCAATCGCGATTTTCGCCTGCGCGCCGCTTTCGCTCCAGCCTTCCAGTTTCAGCAAGTCGCACAGCTCAACGTGCGGATGTTTACCTAAAGAAAATGTCGCCATGTTACTCATCCTGTGGGTCATGATATTCa > 2:1832066/1‑140 (MQ=255) ttCGTCAATCGCGATTTTCGCCTGCGCGCCGCTTTCGCTCCAGCCTTCCAGTTTCAGCAAGTCGCACAGCTCAACGTGCGGATGTTTACCTAAAGACAATGTCGCCATGTTACTCATCCTGTGGGTCATGATATTCAacg < 2:6784995/140‑1 (MQ=255) ttCGGCAATCGCGATTTTCGCCTGCGCGCCGCTTTCGCTCCAGCCTTCCAGTTTCAGCAAGTCGCACAGCTCAACGTGCGGATGTTTACCTAAAGAAAATGTCGCCATGTTACTCATCCTGTGGGTCATGATATTCAacg < 1:7571991/140‑1 (MQ=255) ttCGGCAATCGCGATTTTCGCCTGCGCGCCGCTTTCGCTCCAGCCTTCCAGTTTCAGCAAGTCGCACAGCTCAACGTGCGGATGTTTACCTAAAGAAAATGTCGCCATGTTACTCATCCTGTGGGTCATGATATTCAacg < 2:238834/140‑1 (MQ=255) ttCGGCAATCGCGATTTTCGCCTGCGCGCCGCTTTCGCTCCAGCCTTCCAGTTTCAGCAAGTCGCACAGCTCAACGTGCGGATGTTTACCTAAAGAAAATGTCGCCATGTTACTCATCCTGTGGGTCATGATATTCAacg < 1:3703604/140‑1 (MQ=255) ttCGGCAATCGCGATTTTCGCCTGCGCGCCGCTTTCGCTCCAGCCTTCCAGTTTCAGCAAGTCGCACAGCTCAACGTGCGGATGTTTACCTAAAGAAAATGTCGCCATGTTACTCATCCTGTGGGTCATGATATTCAacg < 1:9333365/140‑1 (MQ=255) ttCGGCAATCGCGATTTTCGCCTGCGCGCCGCTTTCGCTCCAGCCTTCCAGTTTCAGCAAGTCGCACAGCTCAACGTGCGGATGTTTACCTAAAGAAAATGTCGCCATGTTACTCATCCTGTGGGTCATGATATTCAacg < 1:7825572/140‑1 (MQ=255) ttCGGCAATCGCGATTTTCGCCTGCGCGCCGCTTTCGCTCCAGCCTTCCAGTTTCAGCAAGTCGCACAGCTCAACGTGCGGATGTTTACCTAAAGAAAATGTCGCCATGTTACTCATCCTGTGGGTCATGATATTCAacg < 1:10263568/140‑1 (MQ=255) ttCGGCAATCGCGATGGTCGCCTGCGCGCCGCTTTCGCTCCAGCCTTCCAGTTTCAGCAAGTCGCACAGCTCAACGTGCGGATGTTTACCTAAAGAAAATGTCGCCATGTTACTCATCCTGTGGGTCATGATATTCAacg < 2:482032/140‑1 (MQ=255) ttCGGCAATCGCGAGTGTCGCCTGCGCGCCGCTTTCGCTCCAGCCTTCCAGTTTCAGCAAGTCGCACAGCTCAACGTGCGGATGTTTACCTAAAGAACATGTCGCCATGTTACTCATCCTGTGGGTCATGATATTCAacg < 2:5325139/140‑1 (MQ=255) ttCGGCAATCCCGCATCTCGCCTGCGCGCAGCTTTCGCGACAGCCATCCAGTTTCACCAAGTCGCACAGCTCAACGTGCGGATGTTTACCTTTAGTAAATGTCGCCATGTTACTCATCCTGTTGGTCATGATATTCAacg < 2:10746900/140‑1 (MQ=255) cGGCAATCGCGCTTTGCGCCTGCGCGCCGCGTTCGCTCCAGCCTTCCAGCTCCAGCCAGCCGCACAGCTCAACGAGCGGAGGTTTACCTCAAGAAAATGTCGCCATGTTACTCAACCTGTGGGTCATGATATTCAacgca < 2:189709/140‑1 (MQ=255) cGGCAATCGCGATTTTCGCCTGCGCGCCGCTTTCGCTCCAGCCTTCCAGTTTCAGCAAGTCGCACAGCTCAACGTGCGGATGTTTACCTAAAGAAAATGTCGCCATGTTACTCATCCTGTGGGTCATGATATTCAacgca > 2:5608320/1‑140 (MQ=255) cGGCAATCGCGATTTTCGCCTGCGCGCCGCTTTCGCTCCAGCCTTCCAGTTTCAGCAAGTCGCACAGCTCAACGTGCGGATGTTTACCTAAAGAAAATGTCGCCATGTTACTCATCCTGTGGGTCATGATATTCAacgca < 2:2898707/140‑1 (MQ=255) cGGCAATCGCGATTTTCGCCTGCGCGCCGCTTTCGCTCCAGCCTTCCAGTTTCAGCAAGTCGCACAGCTCAACGTGCGGATGTTTACCTAAAGAAAATGTCGCCATGTTACTCATCCTGTGGGTCATGATATTCAacgca < 1:11077137/140‑1 (MQ=255) cGGCAATCGCGATTTTCGCCTGCGCGCCGCTTTCGCTCCAGCCTTCCAGTTTCAGCAAGTCGCACAGCTCAACGTGCGGATGTTTACCTAAAGAAAATGTCGCCATGTTACTCATCCTGTGGGTCATGATATTCAacgca < 1:10061304/140‑1 (MQ=255) cGGCAATCGCGATTTTCGCCTGCGCGCCGCTTTCGCTCCAGCCTTCCAGTTTCAGCAAGTCGCACAGCTCAACGTGCGGATGTTTACCTAAAGAAAATGTCGCCATGTTACTCATCCTGTGGGTCATGATATTCAacgca < 1:10622498/140‑1 (MQ=255) cGGCAATCGCGATTTTCGCCTGCGCGCCGCTTTCGCTCCAGCCTTCCAGTTTCAGCAAGTCGCACAGCTCAACGTGCGGATGATTACCTAAAGAAAATGTCGCCATGTTACTCATCCTGTGGGTCATGATATTCAacgca < 2:1460135/140‑1 (MQ=255) cGGCAATCGCGATTTTCGCCAGCGCGCCGCTTTCGCTCCAGCCTTCCAGTGTCAGCAAGTCGCACAGCTCAACGTGCGGATGTTTACCTAAAGAAAATGTCGCCATGTTACTCATCCTGTGGGTCATGATATTCAacgca < 1:9067371/140‑1 (MQ=255) tCGCGATTTTCGCCTGCGCGCCGCTTTCGCTCCAGCCTTCCAGTTTCAGCAAGTCGCACAGCTCAACGTGCGGATGTTTACCTAAAGAAAATGTCGCCATGTTACTCATCCTGTGGGTCATGATATTCAACGCACGCCTg < 2:6168139/140‑1 (MQ=255) aTTTTCGCCTGCGCGCCGCTTTCGCTCCAGCCTTCCAGTTTCAGCAAGTCGCACAGCTCAACGTGCGGATGTTTACCTAAAGAAAATGTCGCCATGTTACTCATCCTGTGGGTCATGATATTCAACGCACGCCTGTAGCg < 1:8127471/140‑1 (MQ=255) aTTTTCGCCTGCGCGCCGCTTTCGCTCCAGCCTTCCAGTTTCAGCAAGTCGCACAGCTCAACGTGCGGATGTTTACCTAAAGAAAATGTCGCCATGTTACTCATCCTGTGGGTCATGATATTCAACGCACGCCTGTAGCg < 1:3931137/140‑1 (MQ=255) tCGCCTGCGCGCCGCTTTCGCTCCAGCCTTCCAGTTTCAGCAAGTCGCACAGCTCAACGTGCGGATGTTTACCTAAAGAAAATGTCGCCATGTTACTCATCCTGTGGGTCATGATATTCAACGCACGCCTGTAGCGTGtt < 1:5615250/140‑1 (MQ=255) gCCTGCGCGCCGCTTTCGCTCCAGCCTTCCAGTTTCAGCAAGTCGCACAGCTCAACGTGCGGATGTTTACCTAAAGAAAATGTCGCCATGTTACTCATCCTGTGGGTCATGATATTCAACGCACGCCTGTAGCGTGtttt > 2:7543419/1‑140 (MQ=255) gcgcgcCGCTTTCGCTCCAGCCTTCCAGTTTCAGCAAGTCGCACAGCTCAACGTGCGGATGTTTACCTAAAGAAAATGTCGCCATGTTACTCATCCTGTGGGTCATGATATTCAACGCACGCCTGTAGCGTGTTTTCAAt < 1:5736544/140‑1 (MQ=255) cgcgcCGCTTTCGCTCCAGCCTTCCAGTTTCAGCAAGTCGCACAGCTCAACGTGCGGATGTTTACCTAAAGAAAATGTCGCCATGTTACTCATCCTGTGGGTCATGATATTCAACGCACGCCTGTAGCGTGTTTTCAATc < 1:2038255/140‑1 (MQ=255) cgcgcCGCTTTCGCTCCAGCCTTCCAGTTTCAGCAAGTCGCACAGCTCAACGTGCGGATGTTTACCTAAAGAAAATGTCGCCATGTTACTCATCCTGTGGGTCATGATATTCAACGCACGCCTGTAGCGTGTTTTCAATc < 2:11015323/140‑1 (MQ=255) cgcgcCGCTTTCGCTCCAGCCTTCCAGTTTCAGCAAGTCGCACAGCTCAACGTGCGGATGTTTACCTAAAGAAAATGTCGCCATGTTACTCATCCTGTGGGTCATGATATTCAACGCACGCCTGTAGCGTGTTTTCAATc < 1:8937499/140‑1 (MQ=255) cgcgcCGCTTTCGCGCCAGCCTTCCAGTTTCCGCAAGTCGCACAGCTCAACGTGCGGATGTTTCCCTAAAGAAAATGTCGCCATGTTACTCATCCTGTGGGTCATGATATTCAACGCACGCCTGTAGCGTGTTTTCCATc < 2:786329/140‑1 (MQ=255) cTTTCGCTCCAGCCTTCCAGTTTCAGCAAGTCGCACAGCTCAACGTGCGGATGTTTACCTAAAGAAAACGTCGCCATGTTACTCATCCTGTGGGTCATGATATTCAACGCACGCCTGTAGCGTGTTTTCAATCAGCGTgg < 1:11261155/140‑1 (MQ=255) tCGCTCCAGCCTTCCAGTTTCAGCAAGTCGCACAGCTCAACGTGCGGATGTTTACCTAAAGAAAATGTCGCCATGTTACTCATCCTGTGGGTCATGATATTCAACGCACGCCTGTAGCGTGTTTTCAATCAGCGTGGCaa < 1:9680165/140‑1 (MQ=255) cGCTCCAGCCTTCCAGTTTCAGCAAGTCGCACAGCTCAACGTGCGGATGTTTACCTAAAGAAAATGTCGCCATGTTACTCATCCTGTGGGTCATGATATTCAACGCACGCCTGTAGCGTGTTTTCAATCAGCGTGGCAAc < 1:5025623/140‑1 (MQ=255) cGCTCCAGCCTTCCAGTTTCAGCAAGTCGCACAGCTCAACGTGCGGATGTTTACCTAAAGAAAATGTCGCCATGTTACTCATCCTGTGGGTCATGATATTCAACGCACGCCTGTAGCGTGTTTTCAATCAGCGTGGCAAc < 2:2779648/140‑1 (MQ=255) ccAGTTTCAGCAAGTCGCACAGCTCAACGTGCGGATGTTTACCTAAAGAAAATGTCGCCATGTTACTCATCCTGTGGGTCATGATATTCAACGCACGCCTGTAGCGTGTTTTCAATAAGCGTGGCAACCGTCATCGGGcc > 2:1948213/1‑140 (MQ=255) aGTTTCAGCAAGTCGCACAGCTCAACGTGCGGATGTTTACCTAAAGAAAATGTCGCCATGTTACTCATCCTGTGGGTCATGATATTCAACGCACGCCTGTAGCGTGTTTTCAATCAGCGTGGCAACCGTCATCGGGCCaa < 1:2654147/140‑1 (MQ=255) tttCAGCAAGTCGCACAGCTCAACGTGCGGATGTTTACCTAAAGAAAATGTCGCCATGTTACTCATCCTGTGGGTCATGATATTCAACGCACGCCTGTAGCGTGTTTTCAATCAGCGTGGCAACCGTCATCGGGCCAAcg < 2:3168627/140‑1 (MQ=255) tttCAGCAAGTCGCACAGCTCAACGTGCGGATGTTTACCTAAAGAAAATGTCGCCATGTTACTCATCCTGTGGGTCATGATATTCAACGCACGCCTGTAGCGTGTTTTCAATCAGCGTGGCAACCGTCATCGGGCCAAcg < 2:10485604/140‑1 (MQ=255) tttCAGCAAGTCGCACAGCTCAACGTGCGGATGTTTACCTAAAGAAAATGTCGCCATGTTACTCATCCTGTGGGTCATGATATTCAACGCACGCCTGTAGCGTGTTTTCAATCAGCGTGGCAACCGTCATCGGGCCAAcg < 1:7064886/140‑1 (MQ=255) tttCAGCAAGTCGCACAGCTCAACGTGCGGATGTTTACCTAAAGAAAATGTCGCCATGTTACTCATCCTGTGGGTCATGATATTCAACGCACGCCTGTAGCGTGTTTTCAATCAGCGTGGCAACCGTCATCGGGCCAAcg < 1:1324275/140‑1 (MQ=255) cAAGTCGCACAGCTCAACGTGCGGATGTTTACCTAAAGAAAATGTCGCCATGTTACTCATCCTGTGGGTCATGATATTCAACGCACGCCTGTAGCGTGTTTTCAATCAGCGTGGCAACCGTCATCGGGCCAACGccgccg < 2:2587591/140‑1 (MQ=255) tCGCACAGCTCAACGTGCGGATGTTTACCTAAAGAAAATGTCGCCATGTTACTCATCCTGTGGGTCATGATATTCAACGCACGCCTGTAGCGTGTTTTCAATCAGCGTGGCAACCGTCATCGGGCCAACGCCGCCGGGaa < 2:5172184/140‑1 (MQ=255) tCGCACAGCTCAACGTGCGGATGTTTACCTAAAGAAAATGTCGCCATGTTACTCATCCTGTGGGTCATGATATTCAACGCACGCCTGTAGCGTGTTTTCAATCAGCGTGGCAACCGTCATCGGGCCAACGCCGCCGGGaa > 1:5421756/1‑140 (MQ=255) tCGCACAGCTCAACGTGCGGATGTTTACCTAAAGAAAATGTCGCCATGTTACTCATCCTGTGGGTCATGATATTCAACGCACGCCTGTAGCGTGTTTTCAATCAGCGTGGCAACCGTCATCGGGCCAACGCCGCCGGGaa < 1:484187/140‑1 (MQ=255) tCGCACAGCTCAACGTGCGGATGTTTACCTAAAGAAAATGTCGCCATGTTACTCATCCTGTGGGTCATGATATTCAACGCACGCCTGTAGCGTGTTTTCAATCAGCGTGGCAACCGTCATCGGGCCAACGCCGCCGGGaa < 1:4664566/140‑1 (MQ=255) tCGCACAGCTCAACGTGCGGATGTTTACCTAAAGAAAATGTCGCCATGTTACTCATCCTGTGGGTCATGATATTCAACGCACGCCTGTAGCGTGTTTTCAATCAGCGTGGCAACCGTCATCGGGCCAACGCCGCCGGGaa < 2:6506616/140‑1 (MQ=255) tCGCACAGCTCAACGTGCGGATGTTTACCTAAAGAAAATGTCGCCATGTTACTCATCCTGTGGGTCATGATATTCAACGCACGCCTGTAGCGTGTTTTCAATCAGCGTGGCAACCGTCATCGGGCCAACGCCGCCGGGaa < 1:3355789/140‑1 (MQ=255) tCGCACAGCTCAACGTGCGGATGTTTACCTAAAGAAAATGTCGCCATGTTACTCATCCTGTGGGTCATGATATTCAACGCACGCCTGTAGCGTGTTTTCAATCAGCGTGGCAACCGTCATCGGGCCAACGCCGCCGGGaa < 2:7299666/140‑1 (MQ=255) tCGCACAGCTCAACGTGCGGATGTTTACCTAAAGAAAATGTCGCCATGTTACTCATCCTGTGGGTCATGATATTCAACGCACGCCTGTAGCGTGTTTTCAATCAGCGTGGCAACCGTCATCGGGCCAACGCCGCCGGGaa < 2:8405014/140‑1 (MQ=255) acccacaGCTCAACGAGCGGAGGATGACCAACAGAAAATGTAGCCAGCGTACGCACCCTGTGGGGCTAGATATTCAACGCACGCCTGTAGCGTGTGTTCAATCAGCGTGTCAACCGTCCTCGGGCCAACGCCGCCGGGaa < 2:8072152/137‑1 (MQ=255) acaGCTCAACGTGCGGATGTTTACCTAAAGAAAATGTCGCCATGTTACTCATCCTGTGGGTCATGATATTCAACGCACGCCTGTAGCGTGTTTTCAATCAGCGTGGCAACCGTCATCGGGCCAACGCCGCCGGGAACAgg < 2:2073342/140‑1 (MQ=255) acaGCTCAACGTGCGGATGTTTACCTAAAGAAAATGTCGCCATGTTACTCATCCTGTGGGTCATGATATTCAACGCACGCCTGTAGCGTGTTTTCAATCAGCGTGGCAACCGTCATCGGGCCAACGCCGCCGGGAACAgg < 2:4312198/140‑1 (MQ=255) acaGCTCAACGTGCGGATGTTTACCTAAAGAAAATGTCGCCATGTTACTCATCCTGTGGGTCATGATATTCAACGCACGCCTGTAGCGTGTTTTCAATCAGCGTGGCAACCGTCATCGGGCCAACGCCGCCGGGAACAgg < 1:4155653/140‑1 (MQ=255) aGCTCAACGTGCGGATGTTTACCTAAAGAAAATGTCGCCATGTTACTCATCCTGTGGGTCATGATATTCAACGCACGCCTGTAGCGTGTTTTCAATCAGCGTGGCAACCGTCATCGGGCCAACGCCGCCGGGAACAGGCg < 1:8475161/140‑1 (MQ=255) gCTCAACGTGCGGATGTTTACCTAAAGAAAATGTCGCCATGTTACTCATCCTGTGGGTCATGATATTCAACGCACGCCTGTAGCGTGTTTTCAATCAGCGTGGCAACCGTCATCGGGCCAACGCCGCCGGGAACAGGCGt < 1:5885400/140‑1 (MQ=255) gCTCAACGTGCGGATGTTTACCTAAAGAAAATGTCGCCATGTTACTCATCCTGTGGGTCATGATATTCAACGCACGCCTGTAGCGTGTTTTCAATCAGCGTGGCAACCGTCATCGGGCCAACGCCGCCGGGAACAGGCGt < 1:4524182/140‑1 (MQ=255) gCTCAACGTGCGGATGTTTACCTAAAGAAAATGTCGCCATGTTACTCATCCTGTGGGTCATGATATTCAACGCACGCCTGTAGCGTGTTTTCAATCAGCGTGGCAACCGTCATCGGGCCAACGCCGCCGGGAACAGGCGt < 1:2265977/140‑1 (MQ=255) gCTCAACGTGCGGATGTTTACCTAAAGAAAATGTCGCCATGTTACTCATCCTGTGGGTCATGATATTCAACGCACGCCTGTAGCGTGTTTTCAATCAGCGTGGCAACCGTCATCGGGCCAACGCCGCCGGGAACAGGCGt < 2:8305856/140‑1 (MQ=255) gCTCAACGTGCGGATGTTTAACTAAAGAAAATGTCGCCATTTTACTCATCCTGTGGGTCCTGATATTCTACGCACGACTGTAGCGTGTTTTCATTCAGCGTGGCAACCGTCATCGGGCCTACGCCGCCGGTTACAGGCGt < 2:1242958/140‑1 (MQ=255) gCTCAACGAGCGGATGTCTACCTCACGAAAATCGCGCCATGTTACTCATCCTGTGGGTCAGGATCTTCAACGCACGCCTGTAGCGTGTTTTCAATCAGCGTGGCAACCGTCATCGGGCCAACGCCGCCGGGAACAGGCGt < 2:9385049/140‑1 (MQ=255) ctctACGTGCGGATGTTTACCTAAAGAAAATGTCGCCATGTTACTCATACTGTGGGTCATGATATTCATCGCACGCCTGTAGCGTGTTTTCAATCAGCGTGGCAACCGTCATCGGGCCAACGCCGCCGGGAACAGGCGTa < 1:8642433/140‑1 (MQ=255) cTCAACGTGCGGATGTTTACCTAAAGAAAATGTCGCCATGTTACTCATCCTGTGGGTCATGATATTCAACGCACGCCTGTAGCGTGTTTTCAATCAGCGTGGCAACCGTCATCGGGCCAACGCCGCCGGGAACAGGCGTa < 2:9148076/140‑1 (MQ=255) cTCAACGTGCGGATGTTTACCTAAAGAAAATGTCGCCATGTTACTCATCCTGTGGGTCATGATATTCAACGCACGCCTGTAGCGTGTTTTCAATCAGCGTGGCAACCGTCATCGGGCCAACGCCGCCGGGAACAGGCGTa > 1:198366/1‑140 (MQ=255) tCAACGTGCGGATGTGTACCTAAAGAAAATGTCGCCATGTTACTCATCCTGTGGGTCATGATATTCAACGCACGCCTGTAGCGTGTTTTCAATCAGCGTGGCAACCGTCATCGGGCCAACGCCGCCGGGAACAGGCGTaa < 2:591679/140‑1 (MQ=255) gCGGATGTTTACCTAAAGAAAATGTCGCCATGTTACTCATCCTGTGGGTCATGATATTCAACGCACGCCTGTAGCGTGTTTTCAATCAGCGTGGCACCCGTCATCGGGCCAACGCCGCCGGGAACAGGCGTAATGTATGa > 2:7735062/1‑140 (MQ=255) gCGGATGTTTACCTAAAGAAAATGTCGCCATGTTACTCATCCTGTGGGTCATGATATTCAACGCACGCCTGTAGCGTGTTTTCAATCAGCGTGGCAACCGTCATCGGGCCAACGCCGCCGGGAACAGGCGTACTGTATGa > 2:4992825/1‑140 (MQ=255) cGGATGTTTACCTAAAGAAAATGTCGCCATGTTACTCATCCTGTGGGTCATGATATTCAACGCACGCCTGTAGCGTGTTTTCAATCAGCGTGGCATCCGTCATCGGGCCAACGCCGCCGGGAACAGGCGTATTGTATGAg < 1:6008246/140‑1 (MQ=255) ggATGTTTACCTAAAGAAAATGTCGCCTTGTTACTCATCCTGTGGGTCATGATATTCAACGCACGCCTGTAGCGTGTTTTCAATCAGCGTGGCAACCGTCATCGGGCCAACGCCGCCGGGAACAGGCGTAATGGATGAgg > 2:8688177/1‑140 (MQ=255) ggATGTTTACCTAAAGAAAATGTCGCCATGTTACTCATCCTGTGGGTCATGATATTCAACGCTCGCCTGTAGCGTGTTTTCAATCAGCGTGGCAACCGTCATCGGGCCAACGCCGCCGGGACCAGGCGTAATGTATGAgg > 1:836715/1‑140 (MQ=255) ggATGTTTACCTAAAGAAAATGTCGCCATGTTACTCATCCTGTGGGTCATGATATTCAACGCACGCCTGTAGCGTGTTTTCAATCAGCGTGGCAACCGTCATCGGGCCAAcg < 1:5248023/112‑1 (MQ=255) ggATGTTTACCTAAAGAAAATGTCGCCATGTTACTCATCCTGTGGGTCATGATATTCAACGCACGCCTGTAGCGTGTTTTCAATCAGCGTGGCAACCGTCATCGGGCCAACGCCGCCGGGAACAGGCGTAATGTATGAgg > 2:10029715/1‑140 (MQ=255) ggATGTTTACCTAAAGAAAATGTCGCCATGTTACTCATCCTGTGGATCATGATATTCAACGCACGCCTGTAGCGTGTTTTCAATCAGCGTGGCAACCGTCATCGGGCCAACGCCGCCGGGAACAGGCGTAATGTATGAgg > 2:3347232/1‑140 (MQ=255) gATGTTTACCTAAAGAAAATGTCGCCATGTTACTCATCCTGTGGGTCATGATATTCAACGCACGCCTGTAGCGTGTTTTCAATCAGCGTGGCAACCGTCATCGGGCCAACGCCGCCGGGAACAGGCGTAATTTATCAGgc < 2:1671411/140‑1 (MQ=255) gATGTTTACCTAAAGAAAATGTCGCCATGTTACTCATCCTGTGGATCATGATATTCAACGCACGCCTGTAGCGTGTTTTCAATCAGCGTGGCAACCGTCATCGGGCCAACGCCGCCGGGAACAGGCGTAATGTATGAGgc < 1:4382553/140‑1 (MQ=255) tACCTAAAGAAAATGTCGCCATGTTACTCATCCTGTGGGTCATGATATTCAACGCACGCCTGTAGCGTGTTTTCAATCAGCGTGGCAACCGTCATCGGGCCAACGCCGCCGGGAACAGGCGTAATGTATGAGGCGCGttt > 1:1206950/1‑140 (MQ=255) ccTAAAGAAAATGTCGCCATGTTACTCATCCTGTGGGTCATGATATTCAACGCACGCCTGTAGCGTGTTTTCAATCAGCGTGGCAACCGTCATCGGGCCAACGCCGCCGGGAACAGGCGTAATGTATGAGGCGCGTTTAg > 2:950497/1‑140 (MQ=255) aaaGAAAATGTCGCCATGTTACTCATCCTGTGGGTCATGATATTCAACGCACGCCTGTAGCGTGTTTTCAATCAGCGTGGCAACCGTCATCGGGCCAACGCCGCCGGGAACAGGCGTAATGTATGAGGCGCGTTTAGCcg > 2:10137794/1‑140 (MQ=255) acgaacctGTCGCCATGTTACACATCCTGTGGGTCATGATATTCACCGCACGCCTGTAGCGTGTTTTCAATCAGCGTGGCAACCGTCATCGGGCCAACGCCGCCGGGAACAGGCGTAATGTATGAGGCGCGTTTAGCcgc < 2:3791253/133‑1 (MQ=255) aGAAAATGTCGCCATGTTACTCATCCTGTGGGTCATGATATTCACCGCACGCCTGTAGCGTGTTTTCAATCAGCGTGGCAACCGTCATCGGGCCAACGCCGCCGGGAACAGGCGTAATGTATGAGGCGCGTTTAGCcgcg < 1:3453568/140‑1 (MQ=255) aTGTCGCCATGTTACTCATCCTGTGGGTCATGATATTCAacgca < 2:714523/44‑1 (MQ=255) aTGTCGCCATGTTACTCATCCTGTGGGTCATGATATTCAACGCACGCCTGTAGCGTGTTTTCAATCAGCGTGGCAACCGTCATCGGGCCAACGCCGCCGGGAACAGGCGTAATGTATGAGGCGCGTTTAGCCGCGTCTTc < 1:716683/140‑1 (MQ=255) tGTCGCCATGTTACTCATCCTGTGGGTCATGATATTCAACGCACGCCTGTAGCGTGTTTTCAATCAGCGTGGCAACCGTCATCGGGCCAACGCCGCCGGGAACAGGCGTAATGTATGAGGCGCGTTTAGCCGCGTCTTCa > 1:10201136/1‑140 (MQ=255) gCCATGTTACTCATCCTGTGGGTCATNATATTCAACGCACGCCTGTAGCGTGTTTTCAATCAGCGTGGCAACCGTCATCGGGCCAACGCAGCCGGGAACAGGCGTAATGTATGAGGCGCGTTTAGCCGCGTCTTCAAaca < 1:6791251/140‑1 (MQ=255) gTTACTCATCCTGTGGGTCATGATATTCAACGCACGCCTGTAGCGTGTTTTCAATCAGCGTGGCAACCGTCATCGGGCCAACGCCGCCGGGAACAGGCGTAATGTATGAGGCGCGTTTAGCCGCGTCTTCAAACacgacg > 1:2510799/1‑140 (MQ=255) gTTACTCATCCTGTGGGTCATGATATTCAACGCACGCCTGTAGCGTGTTTTCAATCAGCGTGGCAACCGTCATCGGGCCAACGCCGCCGGGAACAGGCGTAATGTATGAGGCGCGTTTAGCCGCGTCTTCAAACacgacg < 1:6430991/140‑1 (MQ=255) gTTACTCATCCTGTGGGTCATGATATTCAACGCACGCCTGTAGCGTGTTTTCAATCAGCGTGGCAACCGTCATCGGGCCAACGCCGCCGGGAACAGGCGTAATGTATGAGGCGCGTTTAGCCGCGTCTTCAAACacgacg < 2:4654242/140‑1 (MQ=255) ttACTCATCCTGTGGATCATGATATTCAACGCACGCCTGTAGCGTGTTTTCAATCAGCGTGGCAACCGTCATCGGGCCAACGCCGCCGGGAACAGGCGTAATGTATGAGGCGCGTTTAGCCGCGTCTTCAAACACGACGt > 1:10425074/1‑140 (MQ=255) gaCTCATCCTGTGGGTCATGATATTCAACGCACGCCTGTAGCGTGTTTTCAATCAGCGTGGCAACCGTCATCGGGCCAACGCCGCCGGGAACAGGCGTAATGTATGAGGCGCGTTTAGCCGCGTCTTCAAACACGACGTc < 2:11147214/139‑1 (MQ=255) ccTGTGGGTCATGATATTCAACGCACGCCTGTAGCGTGTTTTCAATCAGCGTGGCAACCGTCATCGGGCCAACGCCGCCGGGAACAGGCGTAATGTATGAGGCGCGTTTAGCCGCGTCTTCAAACACGACGTCGCCcaca > 2:9783086/1‑140 (MQ=255) ccTGTGGGTCATGATATTCAACGCACGCCTGTAGCGTGTTTTCAATCAGCGTGGCAACCGTCATCGGGCCAACGCCGCCGGGAACAGGCGTAATGTATGAGGCGCGTTTAGCCGCGTCTTCAAACACGACGTCGCCcaca > 2:3636795/1‑140 (MQ=255) ccTGTGGGTCATGATATTCAACGCACGCCTGTAGCGTGTTTTCAATCAGCGTGGCAACCGTCATCGGGCCAACGCCGCCGGGAACAGGCGTAATGTATGAGGCGCGTTTAGCCGCGTCTTCAAACACGACGTCGCCcaca > 1:953648/1‑140 (MQ=255) ccTGTGGGTCATGATATTCAACGCACGCCTGTAGCGTGTTTTCAATCAGCGTGGCAACCGTCATCGGGCCAACGCCGCCGGGAACAGGCGTAATGTATGAGGCGCGTTTAGCCGCGTCTTCAAACACGACGTCGCCcaca > 1:10808695/1‑140 (MQ=255) tgtgGGTCATGATATTCAACGCACGCCTGTCGCGTGTTTTCAATCAGCGTGGCAACCGTCATCGGGCCAACGCCGCCGGGAACAGGCGTAATGTCTGAGGCGCGTGTAGCCGCGTCTTCAATCACGACGTCGCCCACAAc > 2:7985229/1‑140 (MQ=255) gtgGGTCATGATATTCAACGCACGCCTGTAGCGTGTTTTCAATCAGCGTGGCAACCGTCATCGGGCCAACGCCGCCGGGAACAGGCGTAATGTATGAGGCGCGTTTAGCCGCGTCTTCAAACACGACGTCGCCCACAACt > 1:3059567/1‑140 (MQ=255) gtgGGTCATGATATTCAACGCACGCCTGTAGCGTGTTTTCAATCAGCGTGGCAACCGTCATCGGGCCAACGCCGCCGGGAACAGGCGTAATGTATGAGGCGCGTTTAGCCGCGTCTTCAAACACGACGTCGCCCACAACt > 1:2850093/1‑140 (MQ=255) tgGGTCATGATATTCAACGCACGCCTGTAGCGTGTTTTCAATCAGCGTGGCAACCGTCATCGGGCCAACGCCGCCGGGAACAGGCGTACTGTATGAGGCGCGTTTAGCCGCGTCTTCAAACACGACGTCGCCCACAACtt > 1:1547014/1‑140 (MQ=255) | GACTTTCACCTGGCCTTCGGCAATCGCGATTTTCGCCTGCGCGCCGCTTTCGCTCCAGCCTTCCAGTTTCAGCAAGTCGCACAGCTCAACGTGCGGATGTTTACCTAAAGAAAATGTCGCCATGTTACTCATCCTGTGGATCATGATATTCAACGCACGCCTGTAGCGTGTTTTCAATCAGCGTGGCAACCGTCATCGGGCCAACGCCGCCGGGAACAGGCGTAATGTATGAGGCGCGTTTAGCCGCGTCTTCAAACACGACGTCGCCCACAACTTTG > NZ_CP025268/555801‑556078 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |