| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 758,126 | T→C | D124D (GAT→GAC) | sucA → | 2‑oxoglutarate dehydrogenase E1 component |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 758,126 | 0 | T | C | 95.5% | 2197.5 / 59.6 | 692 | D124D (GAT→GAC) | sucA | 2‑oxoglutarate dehydrogenase E1 component |
| Reads supporting (aligned to +/- strand): ref base T (16/15); new base C (370/290); total (387/305) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.12e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 698 total aligned reads displayed.
ACGATCTCCGACCCTGACACCAATGTGAAGCAGGTTAAAGTCCTGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGATCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAACGTCGGTTCATTTGCCAGCGGCAAAGAAACCATGAAACTCGGCGAGCTGCTGGAAGCCCTCAAGCAAACCTACTGCGGCCCGATTGGTGCCG > NZ_CP025268/757989‑758265 | aCGATCTCCGACCCTGACACCAATGTGAAGCAGGTTAAAGTCCTGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGAccc < 2:4539823/140‑1 (MQ=255) aTCTCCGACCCTGACACCAATGTGAAGCAGGTTAAAGTCCTGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTc < 1:9031736/140‑1 (MQ=255) aTCTCCGACCCTGACACCAATGTGAAGCAGGTTAAAGTCCTGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTc < 1:3070530/140‑1 (MQ=255) tcCGACCCTGACACCAATTTGAAGCAGGTTAAAGTCCTGCAGCTCATTAACGCATACCTCATCCGTGGTCACAAGCAAGCGAATCTCGATCCGCTGGGACTGAGGCAGCAAGATAAAGTGGACGATCAGGACCCGTCtta > 1:10556082/1‑139 (MQ=255) tcCGACCCTGACACCAATGTGAAGCAGGTTAAAGTCCTGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCttt > 2:2190012/1‑140 (MQ=255) tcCGACCCTGACACCAATGTGAAGCAGGTTAAAGTCCTGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCttt > 1:8619123/1‑140 (MQ=255) tcCGACCCTGACACCAATGTGAAGCAGGTTAAAGTCCTGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCttt > 1:1840640/1‑140 (MQ=255) ccGACCCTGACACCAATGTGAAGCAGGTTAAAGTCCTGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTc < 1:7056968/140‑1 (MQ=255) cGACCCTGACACCAATGTGAAGCAGGTTAAAGTCCTGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGATCCGTCTTTcc > 1:4133161/1‑140 (MQ=255) cGACCCTGACACCAATGTGAAGCAGGTTAAAGTCCTGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTcc < 2:10884227/140‑1 (MQ=255) cTGACACCAATGTGAAGCAGGTTAAAGTCCTGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGAt < 1:6674639/140‑1 (MQ=255) tGACACCAATGTGAAGCAGGTTAAAGTCCTGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATc > 1:4958048/1‑140 (MQ=255) tGACACCAATGTGAAGCAGGTTAAAGTCCTGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATc > 1:4450774/1‑140 (MQ=255) tGACACCAATGTGAAGCAGGTTAAAGTCCTGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATc > 1:5622163/1‑140 (MQ=255) tGACACCAATGTGAAGCAGGTTAAAGTCCTGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATc > 2:3300151/1‑140 (MQ=255) acCAATGTGAAGCAGGTTAAAGTCCTGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGAc < 2:10090798/140‑1 (MQ=255) acCAATGTGAAGCAGGTTAAAGTCCTGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGAc > 1:4558896/1‑140 (MQ=255) ccAATGTGAAGCAGGTTAAAGTCCTGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGAcc < 2:391494/140‑1 (MQ=255) aTGTGAAGCAGGTTAAAGTCCTGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCGACGATCTGACCGac > 2:5941109/1‑139 (MQ=255) aTGTGAAGCAGGTTAAAGTCCTGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGaa > 1:3816396/1‑140 (MQ=255) aTGTGAAGCAGGTTAAAGTCCTGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGaa > 1:743601/1‑140 (MQ=255) tgtgAAGCAGGTTAAAGTCCTGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGTTCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAg < 1:10750010/140‑1 (MQ=255) tgtgAAGCAGGTTAAAGTCCTGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAg < 1:10326578/140‑1 (MQ=255) gtgAAGCAGGTTAAAGTCCTGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGc < 1:8794260/140‑1 (MQ=255) gtgAAGCAGGTTAAAGTCCTGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGc < 2:151130/140‑1 (MQ=255) gtgAAGCAGGTTAAAGTCCTGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGc < 1:1095940/140‑1 (MQ=255) gtgAAGCAGGTTAAAGTCCTGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGc < 2:5609131/140‑1 (MQ=255) tgAAGCAGGTTAAAGTCCTGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCa < 1:945296/140‑1 (MQ=255) gAAGCAGGTTAAAGTCCTGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGATCCGTCTTTCCACGATCTGACCGAAGCAg < 2:7533783/140‑1 (MQ=255) gAAGCAGGTTAAAGTCCTGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAg < 1:11134506/140‑1 (MQ=255) aGCAGGTTAAAGTCCTGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGAc > 1:2341403/1‑140 (MQ=255) gCAGGTTAAAGTCCTGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCCCGATCTGACCGAAGCAGAcg > 1:9819473/1‑139 (MQ=255) gTTAAAGTCCTGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGAc > 1:7815713/1‑125 (MQ=255) gTTAAAGTCCTGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCa > 1:5284980/1‑140 (MQ=255) gTTAAAGTCCTGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCa > 2:7864967/1‑140 (MQ=255) gTTAAAGTCCTGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCa > 2:4159504/1‑140 (MQ=255) gTTAAAGTCCTGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCa > 2:9591863/1‑140 (MQ=255) gTTAAAGTCCTGCAGCTCATTAACGCATACCGCTTCCGAGGTCACCAGCATGAGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGATCCGTCTTTCCACGAACTGACCGAAGCAGACTACCa > 1:1430301/1‑140 (MQ=255) aaaGTCCTGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGga < 1:2144300/140‑1 (MQ=255) aaaGTCCTGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGga < 1:200080/140‑1 (MQ=255) aaGTCCTGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGACTCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGATCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGgag < 2:7371869/140‑1 (MQ=255) aaGTCCTGCAGCTCATTAACGCATACCGCTTCCGTCGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAACTGGCCGATCTCGATCCGTCTTTCCACGATCAGACCGAAGCAGACTTCCAGgag < 2:1193459/140‑1 (MQ=255) aGTCCTGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGgaga < 2:1453241/140‑1 (MQ=255) cTGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCtt > 1:6336911/1‑140 (MQ=255) gCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGCGAAAGTGGCCGATCTGGATCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCa > 2:4756283/1‑140 (MQ=255) cTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAACGt < 2:696334/140‑1 (MQ=255) cTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAACGt < 2:9514496/140‑1 (MQ=255) tCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAACGTc > 1:6494471/1‑140 (MQ=255) cATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAACGTCg > 2:6141720/1‑140 (MQ=255) ttAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCTACGTCGGt > 2:9242278/1‑140 (MQ=255) aCCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGATCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCTGGAGACCTTCAACGTCGGTTCATTTGcc > 2:4342402/1‑140 (MQ=255) aCCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAACGTCGGTTCATTTGcc > 1:4862768/1‑140 (MQ=255) aCCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAACGTCGGTTCATTTGcc < 2:872010/140‑1 (MQ=255) aCCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAACGTCGGTTCATTTGcc > 1:2861902/1‑140 (MQ=255) aCCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAACGTCGGTTCATTTGcc > 2:10450840/1‑140 (MQ=255) aCCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAACGTCGGTTCATTTGcc > 1:2466025/1‑140 (MQ=255) aCCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTACCAGGAGACCTTCAACGTCGGTTCATTTGcc > 1:8064516/1‑140 (MQ=255) aCCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACGTCCAGGAGACCTTCAACGTCGGTTCATTTGcc > 2:6329273/1‑140 (MQ=255) gCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAACGTCGGTTCATTTGCCAGc < 2:777816/140‑1 (MQ=255) cTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAACGTCGGTTCATTTGCCAGCg > 1:10107433/1‑140 (MQ=255) cTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAACGTCGGTTCATTTGCCAGCg > 1:3409684/1‑140 (MQ=255) ttCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAACGTCGGTTCATTTGCCAGCgg > 1:3249873/1‑140 (MQ=255) ttCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAACGTCGGTTCATTTGCCAGCgg > 1:8498781/1‑140 (MQ=255) tCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAACGTCGGTTCATTTGCCAGCGGc > 2:9916292/1‑140 (MQ=255) cGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAACGTCGGTTCATTTGCCAGCGGCaa > 2:9322763/1‑140 (MQ=255) cGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAACGTCGGTTCATTTGCCAGCGGCaa > 1:468437/1‑140 (MQ=255) tGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAACGTCGGTTCATTTGCCAGCGGCAAAg > 1:5480579/1‑140 (MQ=255) cAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAACGTCGGTTCATTTGCCAGCGGCAAAGAAACCAt > 2:378259/1‑140 (MQ=255) gCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAACGTCGGTTCATTTGCCAGCGGCAAAGAAACCATGa < 1:1155835/140‑1 (MQ=255) tGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAACGTCGGTTCATTTGCCAGCGGCAAAGAAACCATGAAAc > 2:9784337/1‑140 (MQ=255) gCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAACGTCGGTTCATTTGCCAGCGGCAAAGAAACCATGAAACt > 2:1981648/1‑140 (MQ=255) gAATCTCGATCCGCTGGGACTGTGGCAGCAAGAGAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAACGTCGGTTCATTTGCCAGCGGCAAAGAAACCATGAAACTCg < 2:6587886/140‑1 (MQ=255) atatcGATCCGCTGGGACTGTGGACGCAAGATAAATTGGCCGATATGGACCCGTCTTTCCACGAACTGAACGAAGGAGACTTCCAGGCTGCCATCATCCACGGTTCAATAGCCAGCCACAAAGCAGCCATAAAACTCggg > 2:10294018/4‑139 (MQ=255) ctcGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAACGTCGGTTCATTTGCCAGCGGCAAAGAAACCATGAAACTCGGCGa < 2:5411433/140‑1 (MQ=255) ctcGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAACGTCGGTTCATTTGCCAGCGGCAAAGAAACCATGAAACTCGGCGa < 2:1612471/140‑1 (MQ=255) ctcGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAACGTCGGTTCATTTGCCAGCGGCAAAGAAACCATGAAACTCGGCGa < 2:5313415/140‑1 (MQ=255) tcGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAACGTCGGTTCATTTGCCAGCGGCCCAGTAACCATGTAGCTCGGCGAg > 2:8969345/1‑140 (MQ=255) cTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAACGTCGGTTCATTTGCCAGCGGCAAAGAAACCATGAAACTCGGCGAGCTGCTGGa < 2:8146179/140‑1 (MQ=255) tGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGATCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAACGTCGGTTCATTTGCCAGCGGCAAAGAAACCATGAAACTCGGCGAGCTGCTGGaa > 2:11101262/1‑140 (MQ=255) gACTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAACGTCGGTTCATTTGCCAGCGGCAAAGAAACCATGAAACTCGGCGAGCTGCTGGAAGcc < 1:4335194/140‑1 (MQ=255) aCTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAANGTCGGTTCATTTGCCAGCGGCAAAGAAACCATGAAACTCGGCGAGCTGCTGGAAGccc < 1:5973806/140‑1 (MQ=255) aCTGTGGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAACGTCGGTTCATTTGCCAGCGGCAAAGAAACCATGAAACTCGGCGAGCTGCTGGAAGccc < 1:9599791/140‑1 (MQ=255) aCTGTGGCAGCAAGAGAAAGGGGCCGATCTGGACCCGTCTTTCCACGATCGGACCGAACCAGACTTCCAGGAGACCAACACCGTCGGTTCCTTTGCCAGCGGCAAAGAAACCATGAAACTCGGCGAGCTGCTGGAAGccc < 2:10625066/140‑1 (MQ=255) tgGCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAACGTCGGTTCATTTGCCAGCGGCAAAGAAACCATGAAACTCGGCGAGCTGCTGGAAGCCCTCaa > 1:3655762/1‑140 (MQ=255) ggCAGCAAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAACGTCGGTTCATTTGCCAGCGGCAAAGAAACCATGAAACTCGGCGAGCTGCTGGAAGCCCTCAAg < 2:4979246/140‑1 (MQ=255) ggCAGCAAGAGAAAGTGGCCGATCGGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAACGTCGGTTCATTTGCCAGCGGCAAAGAAACCATGAAACTCGGCGAGCTGCTGGAAGCCCTCAAg < 2:7227398/140‑1 (MQ=255) caAGATAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAACGTCGGTTCATTTGCCAGCGGCAAAGAAACCATGAAACTCGGCGAGCTGCTGGAAGCCCTCAAGCAAAc > 1:9270038/1‑140 (MQ=255) aTAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAACGTCGGTTCATTTGCCAGCGGCAAAGAAACCATGAAACTCGGCGAGCTGCTGGAAGCCCTCAAGCAAACCTAc > 1:6121902/1‑140 (MQ=255) aTAAAGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAACGTCGGTTCATTTGCCAGCGGCAAAGAAACCATGAAACTCGGCGAGCTGCTGGAAGCCCTCAAGCAAACCTAc > 1:7286768/1‑140 (MQ=255) aaGTGGCCGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAACGTCGGTTCATTTGCCAGCGGCAAAGAAACCATGAAACTCGGCGAGCTGCTGGAAGCCCTCAAGCAAACCTACTGc < 1:7604817/140‑1 (MQ=255) ccGATCTGGATCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAACGTCGGTTCATTTGCCAGCGGCAAAGAAACCATGAAACTCGGCGAGCTGCTGGAAGCCCTCAAGCAAACCTACTGCGGCCCg > 1:10000552/1‑140 (MQ=255) ccGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCCACGTCGGTTCATTTGCCAGCGGCAAAGAAACCATGAAACTCGGCGAGCTGCTGGAAGCCCTCAAGCAAACCTACTGCGGCCCg > 1:2655815/1‑140 (MQ=255) ccGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAACGTCGGTTCATTTGCCAGCGGCAAAGAAACCATGAAACTCGGCGAGCTGCTGGAAGCCCTCAAGCAAACCTACTGCGGCCCg > 1:8163642/1‑140 (MQ=255) ccGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAACGTCGGTTCATTTGCCAGCGGCAAAGAAACCATGAAACTCGGCGAGCTGCTGGAAGCCCTCAAGCAAACCTACTGCGGCCCg > 2:2942462/1‑140 (MQ=255) cGATCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAACGTCGGTTCATTTGCCAGCGGCAAAGAAACCATGAAACTCGGCGAGCTGCTGGAAGCCCTCAAGCAAACCTACTGCGGCCCGa > 2:3598204/1‑140 (MQ=255) tCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAACGTCGGTTCATTTGCCAGCGGCAAAGAAACCATGAAACTCGGCGAGCTGCTGGAAGCCCTCAAGCAAACCTACTGCGGCCCGATTg < 1:6882796/140‑1 (MQ=255) tCTGGACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAACGTCGGTTCATTTGCCAGCGGCAAAGAAACCATGAAACTCGGCGAGCTGCTGGAAGCCCTCAAGCAAACCTACTGCGGCCCGATTg < 2:1856364/140‑1 (MQ=255) ggACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAACGTCGGTTCATTTGCCAGCGGCAAAGAAACCATGAAACTCGGCGAGCTTCTGGAAGCCCTCAAGCAAACCTACTGCGGCCCGATTGGTg < 2:263338/140‑1 (MQ=255) ggACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAACGTCGGTTCATTTGCCAGCGGCAAAGAAACCATGAAACTCGGCGAGCTGCTGGAAGCCCTCAAGCAAACCTACTGCGGCCCGATTGGTg > 2:8452475/1‑140 (MQ=255) ggACCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAACGTCGGTTCATTTGCCAGCGGCAAAGAAACCATGAAACTCGGCGAGCTGCTGGAAGCCCTCAAGCAAACCTACTGCGGCCCGATTGGTg < 1:393616/140‑1 (MQ=255) | ACGATCTCCGACCCTGACACCAATGTGAAGCAGGTTAAAGTCCTGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGATCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAACGTCGGTTCATTTGCCAGCGGCAAAGAAACCATGAAACTCGGCGAGCTGCTGGAAGCCCTCAAGCAAACCTACTGCGGCCCGATTGGTGCCG > NZ_CP025268/757989‑758265 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |