| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 93,044 | C→G | D16E (GAC→GAG) | murE → | UDP‑N‑acetylmuramoyl‑L‑alanyl‑D‑glutamate‑‑2, 6‑diaminopimelate ligase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 93,044 | 0 | C | G | 97.1% | 2653.7 / 52.4 | 788 | D16E (GAC→GAG) | murE | UDP‑N‑acetylmuramoyl‑L‑alanyl‑D‑glutamate‑‑2, 6‑diaminopimelate ligase |
| Reads supporting (aligned to +/- strand): ref base C (10/13); new base G (317/447); total (327/461) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.34e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.67e-01 | |||||||||||
Only 100 of 790 total aligned reads displayed.
GGCGGCGTATTGCGTACCATGAACATCGAGCCGGATGCGCTGACAACGGGCGATAAAAATGAATTTGTGATTAATCAAGGCGAGGGGACAGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGACGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTGCGGCGGGCGATCTCTTTGTAGCTGTAGTAGGTCATCAGGCGGACGGGCGTCGATATATCCCGCAGGCGATAGCGCAAGGTGTGGCTG > NZ_CP025268/92906‑93180 | gggcgTATTGCGTACCATGAACATCGAGCCGGATGCGCTGACAACGGGCGATAAAAATGAATTTGTGATTAATCAAGGCGAGGGGACAGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCa > 2:3455305/2‑140 (MQ=255) cggcgTATTGCGTACCCTGAACATCGAGCCGGATGCGCTGACAACGGGCGATAAAAATGAATGTGTGATTAATCAAGGCGAGGGGACAGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCa < 2:4031406/140‑1 (MQ=255) cggcgTATTGCGTACCATGAACATCGAGCCGGATGCGCTGACAACGGGCGATAAAAATGAATTTGTGATTAATCAAGGCGAGGGGACAGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCa < 1:10361216/140‑1 (MQ=255) cggcgTATTGCGTACCATGAACATCGAGCCGGATGCGCTGACAACGGGCGATAAAAATGAATTTGTGATTAATCAAGGCGAGGGGACAGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCa > 2:10426832/1‑140 (MQ=255) gcgTATTGCGTACCATGAACATCGAGCCGGATGCGCTGACAACGGGCGATAAAAATGAATTTGTGATTAATCAAGGCGAGGGGACAGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCAcc < 1:10948219/140‑1 (MQ=255) gcgTATTGCGTACCATGAACATCGAGCCGGATGCGCTGACAACGGGCGATAAAAATGAATTTGTGATTAATCAAGGCGAGGGGACAGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCAcc < 1:3531815/140‑1 (MQ=255) cgTATTGCGTACCATGAACATCGAGCCGGATGCGCTGACAACGGGCGATAAAAATGAATTTGTGATTAATCAAGGCGAGGGGACAGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCt > 2:6951458/1‑140 (MQ=255) cgTATTGCGTACCATGAACATCGAGCCGGATGCGCTGACAACGGGCGATAAAAATGAATTTGTGATTAATCAAGGCGAGGGGACAGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCt > 2:6028280/1‑140 (MQ=255) cgTATTGCGTACCATGAACATCGAGCCGGATGCGCTGACAACGGGCGATAAAAATGAATTTGTGATTAATCAAGGCGAGGGGACAGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCt > 2:5375700/1‑140 (MQ=255) cgTATTGCGTACCATGAACATCGAGCCGGATGCGCTGACAACGGGCGATAAAAATGAATTTGTGATTAATCAAGGCGAGGGGACAGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCt > 1:3246318/1‑140 (MQ=255) cgTATTGCGTACCATGAACATCGAGCCGGATGCGCTGACAACGGGCGATAAAAATGAATTTGTGATTAATCAAGGCGAGGGGACAGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCt > 2:11284235/1‑140 (MQ=255) tGCGTACCATGAACATCGAGCCGGATGCGCTGACAACGGGCGATAAAAATGAATTTGTGATTAATCAAGGCGAGGGGACAGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTcgcg < 1:76903/140‑1 (MQ=255) cGTACCATGAACATCGAGCCGGATGCGCTGACAACGGGCGATAAAAATGAATTTGTGATTAATCAAGGCGAGGGGACAGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAg < 1:4726184/140‑1 (MQ=255) cGTACCATGAACATCGAGCCGGATGCGCTGACAACGGGCGATAAAAATGAATTTGTGATTAATCAAGGCGAGGGGACAGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAg < 1:3917113/140‑1 (MQ=255) gTACCATGAACATCGAGCCGGATGCGCTGACAACGGGCGATAAAAATGAATTTGTGATTAATCAAGGCGAGGGGACAGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGc < 1:6535769/140‑1 (MQ=255) tACCATGAACATCGAGCCGGATGCGCTGACAACGGGCGATAAAAATGAATTTGTGATTAATCAAGGCGAGGGGACAGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCa > 2:3696033/1‑140 (MQ=255) aCCATGAACATCGAGCCGGATGCGCTGACAACGGGCGATAAAAATGAATTTGTGATTAATCAAGGCGAGGGGACAGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCAc < 2:5494154/140‑1 (MQ=255) aCCATGAACATCGAGCCGGATGCGCTGACAACGGGCGATAAAAATGAATTTGTGATTAATCAAGGCGAGGGGACAGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCAc > 2:8705968/1‑140 (MQ=255) tGAACATCGAGCCGGATGCGCTGACAACGGGCGATAAAAATGAATTTGTGATTAATCAAGGCGAGGGGACAGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCg < 1:7000787/140‑1 (MQ=255) tGAACATCGAGCCGGATGCGCTGACAACGGGCGATAAAAATGAATTTGTGATTAATCAAGGCGAGGGGACAGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCg < 2:7372203/140‑1 (MQ=255) aCATCGAGCCGGATGCGCTGACAACGGGCGATAAAAATGAATTTGTGATTAATCAAGGCGAGGGGACAGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCgaga > 1:5404259/1‑140 (MQ=255) aCATCGAGCCGGAGGCGCTGACAACGGGCGATAAAAATGAAGTTGTGATTCATCAAGGCGAGGGGACAGGTGGCAGATCGTAAGTTGCGCGACCTTCTTGCGCCGTGGGTGCCCGAGGCACCGTCGCGAGCACTGCgaga > 2:470723/1‑140 (MQ=255) aTCGAGCCGGATGCGCTGACAACGGGCGATAAAAATGAATTTGTGATTAATCAAGGCGAGGGGACAGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCgagaga < 1:10252201/140‑1 (MQ=255) aTCGAGCCGGATGCGCTGACAACGGGCGATAAAAATGAATTTGTGATTAATCAAGGCGAGGGGACAGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCgagaga < 2:8561085/140‑1 (MQ=255) cGAGCCGGATGCGCTGACAACGGGCGATAAAATTGAATTTGTGATTAATCAAGGCGAGGGGACAGGTGGCAGATCGTAATTTGCGCGACCGTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCgagagagg > 2:6207060/1‑138 (MQ=255) gAGCCGGATGCGCTGACAACGGGCGATAAAAATGAATTTGTGATTAATCAAGGCGAGGGGACAGGTGGCTGATCGTAATTTGCGCGTCCTTCTTGCTCCGTGGGTGCCAGAGGCAGCTTCGCGAGCACTGCGAGAGAGGa > 1:8855893/1‑140 (MQ=255) gAGCCGGATGCGCTGACAACGGGCGATAAAAATGAATTTGTGATTAATCAAGGCGAGGGGACAGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGa < 1:9663265/140‑1 (MQ=255) gAGCCGGATGCGCTGACAACGGGCGATAAAAATGAATTTGTGATTAATCAAGGCGAGGGGACAGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGa > 1:7945038/1‑140 (MQ=255) gAGCCGGATGCGCTGACAACGGGCGATAAAAATGAATTTGTGATTAATCAAGGCGAGGGGACAGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGa > 2:8790418/1‑140 (MQ=255) gCCGGATGCGCTGACAACGGGCGATAAAAATGAATTTGTGATTAATCAAGGCGAGGGGACAGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGaca < 1:1424164/140‑1 (MQ=255) cGGATGCGCTGACAACGGGCGATAAAAATGAATTTGTGATTAATCAAGGCGAGGGGACAGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACt < 1:6068909/140‑1 (MQ=255) aTGCGCTGACAACGGGCGATAAAAATGAATTTGTGATTAATCAAGGCGAGGGGACAGGTGGCAGATCGTACTTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACTCGa > 2:976974/1‑140 (MQ=255) aTGCGCTGACAACGGGCGATAAAAATGAATTTGTGATGAATCAAGGCGAGGGGACAGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACTCGa < 2:6733417/140‑1 (MQ=255) ggCGATAAAAATGAATTTGTGATTAATCAAGGCGAGGGGACAGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTg < 1:1838241/140‑1 (MQ=255) ggCGATAAAAATGAATTTGTGATTAATCAAGGCGAGGGGACAGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTg < 2:2123379/140‑1 (MQ=255) gCGATAAAAATGAATTTGTGATTAATCAAGGCGAGGGGACAGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGACGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTgc > 1:4302973/1‑140 (MQ=255) cGATAAAAATGAATTTGTGATTAATCAAGGCGAGGGGACAGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTgcg > 2:8356434/1‑140 (MQ=255) aaaaTGAATTTGTGATTAATCAAGGCGAGGGGACAGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGACGCACCTTCGCGAGCACTGCGAGAGTTGACTCTCGACAGCCGTGTGGCTGCggcggg < 1:5854080/140‑1 (MQ=255) tGAATTTGTGATTAATCAAGGCGAGGGGACAGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTGCGGCGGGCGAt < 1:2723588/140‑1 (MQ=255) tGAATTTGTGATTAATCAAGGCGAGGGGACAGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTGCGGCGGGCGAt < 2:10823230/140‑1 (MQ=255) ttGTGATTAATCAAGGCGAGGGGACAGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTGCGGCGGGCGATCTCtt < 2:8665849/140‑1 (MQ=255) tgtgATTAATCAAGGCGAGGGGACAGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTGCGGCGGGCGATCTCttt < 1:10815791/140‑1 (MQ=255) gcttACTCACGGCGAGGTGACCGGTGGCAGATCGTACTTTGCGCGCCCTTCTTGCGCCGTGGGTGCCACAGGCACCGTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGGGGCAGCGGCGGGCGATCTCTGTGTa < 2:9032480/138‑1 (MQ=255) aTTACTCAAGGCGAGGGGACAGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTGCGGCGGGCGATCTCTTTGTAg < 1:4979469/140‑1 (MQ=255) aTTAATCCAGGCGAGGGGACAGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTGCGGCGGGCGATCTCTTTGTAg < 1:10045817/140‑1 (MQ=255) aTTAATCAAGGCGAGGGGACATGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTGCGGCGGGCGATCTCTTTGTAg < 1:225038/140‑1 (MQ=255) aTTAATCAAGGCGAGGGGACAGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTGCGGCGGGCGATCTCTTTGTAg < 1:10523838/140‑1 (MQ=255) aTTAATCAAGGCGAGGGGACAGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTGCGGCGGGCGATCTCTTTGTAg < 2:11002350/140‑1 (MQ=255) ttAATCAAGGCGAGGGGACAGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTGCGGCGGGCGATCTCTTTGTAGc < 2:4240933/140‑1 (MQ=255) gaaTCCAGGCGAGGGGACAGGAGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTGCGGCGGGCTATCTCTTTGTAGCt < 2:10001887/139‑1 (MQ=255) aaTCAAGGCGAGGGGACAGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTGCGGCGGGCGATCTCTTTGTAGCTg < 1:339695/140‑1 (MQ=255) aTCAAGGCGAGGGGACAGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTGCGGCGGGCGATCTCTTTGTAGCTgt > 2:4510469/1‑140 (MQ=255) aTCAAGGCGAGGGGACAGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTGCGGCGGGCGATCTCTTTGTAGCTgt < 1:3058067/140‑1 (MQ=255) aaGGCGAGGGGACAGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTGCGGCGGGCGATCTCTTTGTAGCTgtagt < 2:9307162/140‑1 (MQ=255) aaGGCGAGGGGACAGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTGCGGCGGGCGATCTCTTTGTAGCTgtagt < 2:1218275/140‑1 (MQ=255) ggggACAGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTGCGGCGGGCGATCTCTTTGTAGCTGTAGTAGGtcat < 2:4978759/140‑1 (MQ=255) gggACAGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTGCGGCGGGCGATCTCTTTGTAGCTGTAGTAGGtcatc > 2:2028037/1‑140 (MQ=255) gggACAGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTGCGGCGGGCGATCTCTTTGTAGCGGTAGTAGGtcatc > 2:4613294/1‑140 (MQ=255) gggACAGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTGCGGCGGGCGATCTCTTTGGAGCTGTAGTAGGtcatc < 1:2898191/140‑1 (MQ=255) aGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTGCGGCGGGCGATCTCTTTGTAGCTGTAGTAGGTCATCAGGCg > 1:6171202/1‑140 (MQ=255) gggggCCGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCCGAGGCACCGTCGCGAGCCCTGCGAGAGCTGACACTCGACAGCCGTGTGGCTGCGGCGGGCGAGCTCTGTGTAGCTGTGGTAGGTCCGCAGGCgg > 2:3819802/4‑140 (MQ=255) gTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGTTGACACTCGACAGCCGTGTGGCTGCGGCGGGCGATCTCTTTGTAGCTGTAGTAGGTCATCAGGCGGa < 2:3175784/140‑1 (MQ=255) gTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTGCGGCGGGCGATCTCTTTGTAGCTGTAGTAGGTCCTCAGGCggc > 2:2802133/1‑139 (MQ=255) gTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTGCGGCGGGCGATCTCTTTGTAGCTGTAGTAGGTCATCAGGCGGa < 1:8455275/140‑1 (MQ=255) gTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTGCGGCGGGCGATCTCTTTGTAGCTGTAGTAGGTCATCAGGCGGa < 1:985961/140‑1 (MQ=255) ggCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTGCGGCGGGCGATCTCTTTGTAGCTGTAGTAGGTCATCAGGCGGACg > 2:2249142/1‑140 (MQ=255) ggCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTGCGGCGGGCGATCTCTTTGTAGCTGTAGTAGGTCATCAGGCGGACg < 1:526829/140‑1 (MQ=255) cAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTGCGGCGGGCGATCTCTTTGTAGCTGTAGTAGGTCATCAGGCGGACggg < 1:1237372/140‑1 (MQ=255) gATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTGCGGCGGGCGATCTCTTTGTAGCTGTAGTAGGTCATCAGGCGGACGGGCg < 1:7420306/140‑1 (MQ=255) tCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTGCGGCGGGCGATCTCTTTGTAGCTGTAGTAGGTCATCAGGCGGACGGGCGTc > 2:5680193/1‑140 (MQ=255) cGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGACGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTGCGGCGGGCGATCTCTTTGTAGCTGTAGTAGGTCATCAGGCGGACGGGCGTCg > 1:11180186/1‑140 (MQ=255) gaaaTATGCGCGACCTTCTTGCTCCGTGGGTGACAGAGGCACCTTCGCGAGCACAGCGAGAGAAGACACTCGACAGCCGTCTGGCTCCGCCCGGCGATCACTATGTAGCTGTAGAAAGTCATCAGCCAGACGGGCGTCGa > 2:5137486/3‑140 (MQ=255) tAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGTGGCACCTTCGCGAGCACTGCGAGTGATGACACTCGACAGCCGTGTGGCTGCGGCGGGCGAGCTCGTTGTAGCTGGAGTAGGTCATCAGGCGGACGGGCGTCGag > 2:1833822/1‑139 (MQ=255) aaTTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTGCGGCGGGCGATCTCTTTGTAGCTGTAGTAGGTCATCAGGCGGACGGGCGTCGata < 1:7213818/140‑1 (MQ=255) gcgcGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTGCGGCGGGCGATCTCTTTGTAGCTGTAGTAGGTCATCAGGCGGACGGGCGTCGATATATcc > 2:6586599/1‑140 (MQ=255) gcgcGACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTGCGGCGGGCGATCTCTTTGTAGCTGTAGTAGGTCATCAGGCGGACGGGCGTCGATATATcc > 1:1644957/1‑140 (MQ=255) cgcgACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTGCGGCGGGCGATCTCTTTGTAGCTGTAGTAGGTCATCAGGCGGACGGGCGTCGATATATccc < 2:7739293/140‑1 (MQ=255) cgcgACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTGCGGCGGGCGATCTCTTTGTAGCTGTAGTAGGTCATCAGGCGGACGGGCGTCGATATATccc > 2:2623880/1‑140 (MQ=255) cgACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTGCGGCGGGCGATCTCTTTGTAGCTGTAGTAGGTCATCAGGCGGACGGGCGTCGATATATCCCGc > 1:151827/1‑140 (MQ=255) gACCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTGCGGCGGGCGATCTCTTTGTAGCTGTAGTAGGTCATCAGGCGGACGGGCGTCGATATATCCCGCa < 2:8047995/140‑1 (MQ=255) gACCTTCTTGCTCCGGGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTGCGGCGGGCGATCTCTTTGTAGCTGTAGTAGGTCATCAGGCGGACGGGCGTCGATATATCCCGCa < 1:8701289/140‑1 (MQ=255) aCCTTCTTGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTGCGGCGGGCGATCTCTTTGTAGCTGTAGTAGGTCATCAGGCGGACGGGCGTCGATATATCCCGCAg < 1:5681764/140‑1 (MQ=255) cttGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTGCGGCGGGCGTTCTCTTTGTAGCTGTAGTAGGTCATCAGGCGGACGGGCGTCGATATATCCCGCAGGCGAt < 1:6852950/140‑1 (MQ=255) cttGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTGCGGCGGGCGATCTCTTTGTAGCTGTAGTAGGTCATCAGGCGGACGGGCGTCGATATATCCCGCAGGCGAt < 1:4446341/140‑1 (MQ=255) cttGCTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTGCGGCGGGCGATCTCTTTGTAGCTGTAGTAGGTCATCAGGCGGACGGGCGTCGATATATCCCGCAGGCGAt < 2:11167658/140‑1 (MQ=255) cTCCGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTGCGGCGGGCGATCTCTTTGTAGCTGTAGTAGGTCATCAGGCGGACGGGCGTCGATATATCCCGCAGGCGATAgcg < 1:2531366/140‑1 (MQ=255) ccGTGGGTGCCAGAGGCACCTTCGCGAGGACTGCGAGAGATGACACTCGACAGCCGTGTGGCTGCGGCGGGCGATCTCTTTGTAGCTGTAGTAGGTCCTCAGGCGGACGGGCGTCGATATATCCCGCAGGCGATAGCGCa > 2:5924027/1‑140 (MQ=255) ccGTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTGCGGCGGGCGATCTCTTTGTAGCTGTAGTAGGTCAACAGGCGGACGGGCGTCGATATATCCCGCAGGCGATAGCGCa < 2:2363604/140‑1 (MQ=255) ccGTGGGGGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGACCCTCGACAGCCGTGTGGCTGCGGCGGGCTATCTCTTTCTAGCTGTAGTAGGTCATCAGGCGGACGGGAGTCGATATATCCCGCAGGCGATAGCGCa < 2:10307005/140‑1 (MQ=255) gTGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTGCGGCGGGCGATCTCTTTGTAGCTGTAGTAGGTCATCAGGCGGACGGGCGTCGAGATATCCCGCAGGCGATAGCGCAAg > 1:8151/1‑140 (MQ=255) tGGGTGCCAGAGGCACCTTCGCGAGCCCTGCGAGAGATGACACTCGACCGCCGTGTGGCTGCGGCGGGCGTTCTCGTGGTAGCTGTAGGAGGTCATCAGGCGGAGGGGCGTCGATATATCCCGCAGGCGATAGCGCACgg > 2:10538079/1‑140 (MQ=255) tGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTGCGGCGGGCGATCTCTTTGTAGCTGTAGTAGGTCATCAGGCGGACGGGCGTCGATATATCCCGCAGGCGATAGCGCAAgg > 1:6694858/1‑140 (MQ=255) tGGGTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTGCGGCGGGCGATCTCTTTGTAGCTGTAGTAGGTCATCAGGCGGACGGGCGTCGATATATCCCGCAGGCGATAGCGCAAgg > 1:4075062/1‑140 (MQ=255) ggTGCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTGCGGCGGGCGATCTCTTTGTAGCTGTAGTAGGTCATCAGGCGGACGGGCGTCGATATATCCCGCAGGCGATAGCGCAAGgtg < 2:7541487/140‑1 (MQ=255) agCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTGCGGCGGGCGATCTCTTTGTAGCTGTAGTAGGTCATCAGGCGGACGGGCGTCGATATATCCCGCAGGCGATCGCGCAAGGtgtg > 2:7125043/2‑140 (MQ=255) gCCAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTGCGGCGGGCGATCTCTTTGTAGCTGTAGTAGGTCATCAGGCGGACGGGCGTCGATATATCCCGCAGGCGATAGCGCAAGGTGTgg > 2:9568195/1‑140 (MQ=255) ccAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTGCGGCGGGCGATCTCTTTGTAGCTGTAGTAGGTCATCAGGCGGACGGGCGTCGATATATCCCGCAGGCGATAGCGCAAGGTGTGGc < 1:6299354/140‑1 (MQ=255) ccAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTGCGGCGGGCGATCTCTTTGTAGCTGTAGTAGGTCATCAGGCGGACGGGCGTCGATATATCCCGCAGGCGATAGCGCAAGGTGTGGc > 1:9289453/1‑140 (MQ=255) cAGAGGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTGCGGCGGGCGATCTCTTTGTAGCTGTAGTAGGTCATCAGGCGGACGGGCGTCGATATATCCCGCAGGCGATAGCGCAAGGTGTGGCt < 2:151827/140‑1 (MQ=255) agagGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTGCGGCGGGCGATCTCTTTGTAGCTGTAGTAGGTCATCAGGCGGACGGGCGTCGATATATCCCGCAGGCGATAGCGCAAGGTGTGGCTg > 2:436930/1‑140 (MQ=255) | GGCGGCGTATTGCGTACCATGAACATCGAGCCGGATGCGCTGACAACGGGCGATAAAAATGAATTTGTGATTAATCAAGGCGAGGGGACAGGTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGACGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTGCGGCGGGCGATCTCTTTGTAGCTGTAGTAGGTCATCAGGCGGACGGGCGTCGATATATCCCGCAGGCGATAGCGCAAGGTGTGGCTG > NZ_CP025268/92906‑93180 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |