Predicted mutation
evidence seq id position mutation annotation gene description
RA NZ_CP025268 183,046 T→C G251G (GGT→GGC)  cdaR → DNA‑binding transcriptional regulator CdaR

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NZ_CP025268183,0460TC99.6% 2662.2 / NA 783G251G (GGT→GGC) cdaRDNA‑binding transcriptional regulator CdaR
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base C (260/520);  minor base A (1/2);  total (261/522)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 783 total aligned reads displayed.

CTAACCGAAATGGTGGTGTTGAAACCGGCGTTGAACTCTTTTGGGCGCTGGGATGCAGAAGATCATCGTAAGCGAGTTGAACAACTGATTACCCGCATGAAAGAGTACGGCCAGCTGCGTTTTCGCGTTTCACTGGGTAACTATTTTACCGGTCCTGGCAGTATTGCCCGATCCTATCGTACGGCGAAAACGACGATGGTGGTGGGTAAACAGCGGATGCCAGAAAGTCGCTGCTATTTTTATCAGGATCTGATGTTACCTGTGTTACTCGACA  >  NZ_CP025268/182909‑183182
                                                                                                                                         |                                                                                                                                        
cTAACCGAAATGGTGGTGTTGACACCGGCGTTGAACTCTTTTGGGCGCTGGGATGCAGAAGATCATCGTAAGCGAGTTGAACAACTGATTACCCGCATGAAAGAGTACGGCCAGCTGCGTTTTCGCGTTTCACTGGGCaa                                                                                                                                        <  1:7154668/140‑1 (MQ=255)
cTAACCGAAATGGTGGTGTTGAAACCGGCGTTGAACTCTTTTGGGCGCTGGGATGCAGAAGATCATCGTAAGCGAGTTGAACAACTGATTACCCGCATGAAAGAGTACGGCCAGCTGCGTTTTCGCGTTTCACTGGGCaa                                                                                                                                        >  1:1236910/1‑140 (MQ=255)
 tAACCGAAATGGTGGTGTTGAAACCGGCGTTGAACTCTTTTGGGCGCTGGGATGCAGAAGATCATCGTAAGCGAGTTGAACAACTGATTACCCGCATGAAAGAGTACGGCCAGCTGCGTTTTCGCGTTTCACTGGGCAAc                                                                                                                                       >  1:1031505/1‑140 (MQ=255)
   aCCGAAATGGTGGTGTTGAAACCGGCGTTGAACTCTTTTGGGCGCTGGGATGCAGAAGATCATCGTAAGCGAGTTGAACAACTGATTACCCGCATGAAAGAGTACGGCCAGCTGCGTTTTCGCGTTTCACTGGGCAACTa                                                                                                                                     <  2:1141592/140‑1 (MQ=255)
        aaTGTTGGTGATGAAACAGGAGTTGAACTCTTTTGTGCGCTGGGATGCAGTAGATCATCGTAAGGGAGTTGTACCACTGATTACCCGCATGAATGAGTACGGCCAGCTGCGTTTTCGCGTTTCACGGGGCACCTAttttt                                                                                                                                <  2:9466297/140‑2 (MQ=255)
        aaTGGTGGTGTTGAAACCGGCGTTGAACTCTTTTGGGCGCTGGGATGCAGAAGATCATCGTAAGCGAGTTGAACAACTGATTACCCGCATGAAAGAGTACGGCCAGCTGCGTTTTCGCGTTTCACTGGGCAACTATTTTa                                                                                                                                <  1:7963681/140‑1 (MQ=255)
        aaTGGTGGTGTTGAAACCGGCGTTGAACTCTTTTGGGCGCTGGGATGCAGAAGATCATCGTAAGCGAGTTGAACAACTGATTACCCGCATGAAAGAGTACGGCCAGCTGCGTTTTCGCGTTTCACTGGGCAACTATTTTa                                                                                                                                <  2:4778075/140‑1 (MQ=255)
         aTGGTGGTGTTGAAACCGGCGTTGAACTCTTTTGGGCGCTGGGATGCAGAAGATCATCGTAAGCGAGTTGAACAACTGATTACCCGCATGAAAGAGTACGGCCAGCTGCGTTTTCGCGTTTCACTGGGCAACTATTTTAc                                                                                                                               <  2:10425954/140‑1 (MQ=255)
         aTGGTGGTGTTGAAACCGGCGTTGAACTCTTTTGGGCGCTGGGATGCAGAAGATCATCGTAAGCGAGTTGAACAACTGATTACCCGCATGAAAGAGTACGGCCAGCTGCGTTTTCGCGTTTCACTGGGCAACTATTTTAc                                                                                                                               <  2:3413092/140‑1 (MQ=255)
          tggtggTGTTGAAACCGGCGTTGAACTCTTTTGGGCGCTGGGATGCAGAAGATCATCGTAAGCGAGTTGAACAACTGATTACCCGCATGAAAGAGTACGGCCAGCTGCGTTTTCGCGTTTCACTGGGCAACTATTTTAcc                                                                                                                              <  2:3045889/140‑1 (MQ=255)
          tggtggTGTTGAAACCGGCGTTGAACTCTTTTGGGCGCTGGGATGCAGAAGATCATCGTAAGCGAGTTGAACAACTGATTACCCGCATGAAAGAGTACGGCCAGCTGCGTTTTCGCGTTTCACTGGGCAACTATTTTAcc                                                                                                                              <  1:4738456/140‑1 (MQ=255)
          tggtggTGTTGAAACCGGCGTTGAACTCTTTTGGGCGCTGGGATGCAGAAGATCATCGTAAGCGAGTTGAACAACTGATTACCCGCATGAAAGAGTACGGCCAGCTGCGTTTTCGCGTTTCACTGGGCAACTATTTTAcc                                                                                                                              <  1:3070795/140‑1 (MQ=255)
           cgtgttgTTGAAACCGGCGTTGAACTCTTGCGCGCGCTGGGATGCAGAAGATCAACGGTAGCGAGGTGAACAACTGCTTACCCGCATGAAAGAGTACGCCCAGCTGCGTTTTCGCGATTCACTGGGCAACTAATTTACCg                                                                                                                             <  2:9252295/139‑1 (MQ=255)
             tggtgTTGAAACCGGCGTTGAACTCTTTTGGGCGCTGGGATGCAGAAGATCATCGTAAGCGAGTTGAACAACTGATTACCCGCATGAAAGAGTACGGCCAGCTGCGTTTTCGCGTTTCACTGGGCAACTATTTTACCGGt                                                                                                                           <  2:8746613/140‑1 (MQ=255)
             tggtgTTGAAACCGGCGTTGAACTCTTTTGGGCGCTGGGATGCAGAAGATCATCGTAAGCGAGTTGAACAACTGATTACCCGCATGAAAGAGTACGGCCAGCTGCGTTTTCGCGTTTCACTGGGCAACTATTTTACCGGt                                                                                                                           <  2:517596/140‑1 (MQ=255)
             tggtgTTGAAACCGGCGTTGAACTCTTTTGGGCGCTGGGATGCAGAAGATCATCGTAAGCGAGTTGAACAACTGATTACCCGCATGAAAGAGTACGGCCAGCTGCGTTTTCGCGTTTCACTGGGCAACTATTTTACCGGt                                                                                                                           <  1:7672236/140‑1 (MQ=255)
             tggtgTTGAAACCGGCGTTGAACTCTTTTGGGCGCTGGGATGCAGAAGATCATCGTAAGCGAGTTGAACAACTGATTACCCGCATGAAAGAGTACGGCCAGCTGCGTTTTCGCGTTTCACTGGGCAACTATTTTACCGGt                                                                                                                           <  1:4338307/140‑1 (MQ=255)
               gtgtTGAAACCGGCGTTGAACTCTTTTGGGCGCTGGGATGCAGAAGATCATCGTAAGCGAGTTGAACAACTGATTACCCGCATGAAAGAGTACGGCCAGCTGCGTTTTCGCGTTTCACTGGGCAACTATTTTACCGGTcc                                                                                                                         >  1:10083592/1‑140 (MQ=255)
               gtgtTGAAACCGGCGTTGAACTCTTTTGGGCGCTGGGATGCAGAAGATCATCGTAAGCGAGTTGAACAACTGATTACCCGCATGAAAGAGTACGGCCAGCTGCGTTTTCGCGTTTCACTGGGCAACTATTTTACCGGTcc                                                                                                                         >  2:723282/1‑140 (MQ=255)
                  ttGAAACCGGCGTTGAACTCTTTTGGGCGCTGGGATGCAGAAGATCATCGTAAGCGAGTTGAACAACTGATTACCCGCATGAAAGAGTACGGCCAGCTGCGTTTTCGCGTTTCACTGGGCAACTATTTTACCGGTCCTgg                                                                                                                      <  1:5095897/140‑1 (MQ=255)
                       aCCGGCGTTGAACTCTTTTGGGCGCTGGGATGCAGAAGATCATCGTAAGCGAGTTGAACAACTGATTACCCGCATGACAGAGTACGGCCAGCTGCGTTTTCGCGTTTCACTGGGCAACTATTTTACCGGTCCTGGCAGTa                                                                                                                 <  2:6444207/140‑1 (MQ=255)
                       aCCGGCGTTGAACTCTTTTGGGCGCTGGGATGCAGAAGATCATCGTAAGCGAGTTGAACAACTGATTACCCGCATGAAAGAGTACGGCCAGCTGCGTTTTCGCGTTTCACTGGGCAACTATTTTACCGGTCCTGGCAGTa                                                                                                                 <  1:6459370/140‑1 (MQ=255)
                       aCCGGCGTTGAACTCTTTTGGGCGCTGGGATGCAGAAGATCATCGTAAGCGAGTTGAACAACTGATTACCCGCATGAAAGAGTACGGCCAGCTGCGTTTTCGCGTTTCACTGGGCAACTATTTTACCGGTCCTGGCAGTa                                                                                                                 >  1:7885379/1‑140 (MQ=255)
                       aCCGGCGTTGAACTCTTTTGGGCGCTGGGATGCAGAAGATCATCGTAAGCGAGTTGAACAACTGATTACCCGCATGAAAGAGTACGGCCAGCTGCGTTTTCGCGTTTCACTGGGCAACTATTTTACCGGTCCTGGCAGTa                                                                                                                 <  1:9228686/140‑1 (MQ=255)
                          ggCGTTGAACTCTTTTGGGCGCTGGGATGCAGAAGATCATCGTAAGCGAGTTGAACAACTGATTACCCGCATGAAAGAGTACGGCCAGCTGCGTTTTCGCGTTTCACTGGGCAACTATTTTACCGGTCCTGGCAGTATTg                                                                                                              >  2:4268549/1‑140 (MQ=255)
                            cgatGAACTCGTCTGCGCGCTGGGATGCAGACGATCCTCGTAAGCGAGTTGAACAACTGAGTACCCGCATGAAAGAGTCCGGCCAGCTGCGTTTTCGCGTTTCACTGGGCACCTCTTTTACCGGTCCTGGCAGTATTGcc                                                                                                            <  2:6013342/137‑1 (MQ=255)
                            cGTTGAACTCTTTTGGGCGCTGGGATGCAGAAGATCATCGTAAGCGAGTTGAACAACTGATTACCCGCATGAAAGAGTACGTCCAGCTGCGTTTTCGCGTTTCACTGGGCAACTATTTTACCGGTCCTGGCAGTCTTGcc                                                                                                            <  2:4557046/140‑1 (MQ=255)
                            cGTTGAACTCTTTTGGGCGCTGGGATGCAGAAGATCATCGTAAGCGAGTTGAACAACTGATTACCCGCATGAAAGAGTACGGCCAGCTGCGTTTTCGCGTTTCACTGGGCAACTATTTTACCGGTCCTGGCAGTATTGcc                                                                                                            <  1:9886408/140‑1 (MQ=255)
                            cGTTGAACTCTTTTGGGCGCTGGGATGCAGAAGATCATCGTAAGCGAGTTGAACAACTGATTACCCGCATGAAAGAGTACGGCCAGCTGCGTTTTCGCGTTTCACTGGGCAACTATTTTACCGGTCCTGGCAGTATTGcc                                                                                                            <  1:7447748/140‑1 (MQ=255)
                            cGTTGAACTCTTTTGGGCGCTGGGATGCAGAAGATCATCGTAAGCGAGTTGAACAACTGATTACCCGCATGAAAGAGTACGGCCAGCTGCGTTTTCGCGTTTCACTGGGCAACTATTTTACCGGTCCTGGCAGTATTGcc                                                                                                            <  2:3662911/140‑1 (MQ=255)
                            cGTTGAACTCTTTTGGGCGCTGGGATGCAGAAGATCATCGTAAGCGAGTTGAACAACTGATTACCCGCATGAAAGAGTACGGCCAGCTGCGTTTTCGCGTTTCACTGGGCAACTATTTTACCGGTCCTGGCAGTATTGcc                                                                                                            <  1:1412091/140‑1 (MQ=255)
                            cGTTGAACTCTTTGGGGCGCGGGGATGCAGAAGATCATCGGAAGCGAGTTGAACAACTGATTACCCGCATGAAAGAGTACGGCCAGCTGCGTTTTCGCGTTTCACTGGGCAACTATTTTCCCGGTCCTGGCAGTATTGcc                                                                                                            <  2:2323458/140‑1 (MQ=255)
                               cgAACTCGTTTGGGCGCTGGGAAGCAGAAGATCATCGTAAGCGAGTTGAACAACTGATTACCCGCATGAAAGAGTACGGCCAGCTGCGATGTCGCGTTTCACTGGGCAACTATTTTACCGGTCCTGGCAGTATTGCCCGa                                                                                                         <  1:9328089/139‑1 (MQ=255)
                                gAACTCTTTTGGGCGCTGGGATGCAGAAGATCATCGTAAGCGAGTTGAACAACTGATTACCCGCATGAAAGAGTACGGCCAGCTGCGTTTTCGCGTTTCACTGGGCAACTATTTTACCGGTCCTGGCAGTATTGCCCGAt                                                                                                        <  2:10523080/140‑1 (MQ=255)
                                 aaCTCTTTTGGGCGCTGGGATGCAGAAGATCATCGTAAGCGAGTTGAACAACTGATTACCCGCATGAAAGAGTACGGCCAGCTGCGTTTTCGCGTTTCACTGGGCAACTATTTTACCGGTCCTGGCAGTATTGCCCGATc                                                                                                       <  1:4599686/140‑1 (MQ=255)
                                      ttttGGGCGCTGGGATGCAGAAGATCATCGTAAGCGAGTTGAACAACTGATTACCCGCATGAAAGAGTACGGCCAGCTGCGTTTTCGCGTTTCACTGGGCAACTATTTTACCGGTCCTGGCAGTATTGCCCGATCCTATc                                                                                                  >  1:2413955/1‑140 (MQ=255)
                                         tGGGCGCTGGGATGCAGAAGATCATCGTAAGCGAGTTGAACAACTGATTACCCGCATGAAAGAGTACGGCCAGCTGCGTTTTCGCGTTTCACTGGGCAACTATTTTACCGGTCCTGGCAGTATTGCCCGATCCTATCGTa                                                                                               <  2:10316591/140‑1 (MQ=255)
                                           ggCGCTGGGATGCAGAAGATCATCGTAAGCGAGTTGAACAACTGATTACCCGCATGAAAGAGTACGGCCAGCTGCGTTTTCGCGTTTCACTGGGCAACTATTTTACCGGTCCTGGCAGTATTGCCCGATCCTATCGTACg                                                                                             >  2:10816751/1‑140 (MQ=255)
                                               cTGGGATGCAGAAGATCATCGTAAGCGAGTTGAACAACTGATTACCCGCATGAAAGAGTACGGCCAGCTGCGTTTTCGCGTTTCACTGGGCAACTATTTTACCGGTCCTGGCAGTATTGCCCGATCCTATCGTACGGCGa                                                                                         <  1:2626938/140‑1 (MQ=255)
                                                tGGGATGCAGAAGATCATCGTATGCGAGTTGAACAACTGATTACCCGCATGAAAGAGTACGGCCAGCTGCGTTTTCGCGTTTCACTGGGCAACTATTTTACCGGTCCTGGCAGTATTGCCCGATCCTATCGTACGGCGaa                                                                                        <  2:3524608/140‑1 (MQ=255)
                                                tGGGATGCAGAAGATCATCGTAAGCGAGTTGAACAACTGATTACCCGCATGAAAGAGTACGGCCAGCTGCGTTTTCGCGTTTCACTGGGCAACTATTTTACCGGTCCTGGCAGTATTGCCCGATCCTATCGTACGGCGaa                                                                                        >  2:7802834/1‑140 (MQ=255)
                                                       cAGAAGATCATCGTAAGCGAGTTGAACAACTGATTACCCGCATGAAAGAGTACGGCCAGCTGCGTTTTCGCGTTTCACTGGGCAACTATTTTACCGGTCCTGGCAGTATTGCCCGATCCTATCGTACGGCGAACacgacg                                                                                 <  2:16822/140‑1 (MQ=255)
                                                       cAGAAGATCATCGTAAGCGAGTTGAACAACTGATTACCCGCATGAAAGAGTACGGCCAGCTGCGTTTTCGCGTTTCACTGGGCAACTATTTTACCGGTCCTGGCAGTATTGCCCGATCCTATCGTACGGCGAAAacgacg                                                                                 <  1:1922773/140‑1 (MQ=255)
                                                        agaagaTCATCGTAAGCGAGTTGAACAACTGATTACCCGCATGAAAGAGTACGGCCAGCTGCGTTTTCGCGTTTCACTGGGCAACTATTTTACCGGTCCTGGCAGTATTGCCCGATCCTATCGTACGGCGAAAAcgacga                                                                                <  2:1062307/140‑1 (MQ=255)
                                                        agaagaTCATCGTAAGCGAGTTGAACAACTGATTACCCGCATGAAAGAGTACGGCCAGCTGCGTTTTCGCGTTTCACTGGGCAACTATTTTACCGGTCCTGGCAGTATTGCCCGATCCTATCGTACGGCGAAAAcgacga                                                                                <  1:10719905/140‑1 (MQ=255)
                                                          aagaTCATCGTAAGCGAGTTGAACAACTGATTACCCGCATGACAGAGTACGGCCAGCTGCGTTTTCGCGTTTCACTGGGCAACTATTTTACCGGTCCTGGCAGTATTGCCCGATCCTATCGTACGGCGAAAACGACGAtg                                                                              <  2:404902/140‑1 (MQ=255)
                                                            gaTCATCGTACGCGAGTTGAACAACTGATTACCCGCATGAAAGAGTACGGCCAGCTGCGTTTTCGCGTTTCACTGGGCAACTATTTTACCGGTCCTGGCAGTATTGCCCGATCCTATCGTACGGCGAAAACGACGAtggt                                                                            <  1:3957247/140‑1 (MQ=255)
                                                            gaTCATCGTAAGCGAGTTGAACAACTGATTACCCGCATGAAAGTGTACGGCCAGCTGCGTTTTCGCGTTTCACTGGGCAACTATTTTACCGGTCCTGGCAGTATTGCCCGATCCTATCGTACGGCGAAAACGACGAtggt                                                                            <  1:3167964/140‑1 (MQ=255)
                                                            gaTCATCGTAAGCGAGTTGAACAACTGATTACCCGCATGAAAGAGTACGGCCAGCTGCGTTTTCGCGTTTCACTGGGCAACTATTTTACCGGTCCTGGCAGTATTGCCCGATCCTATCGTACGGCGAAAACGACGAtggt                                                                            <  1:8622080/140‑1 (MQ=255)
                                                            gaTCATCGTAAGCGAGTTGAACAACTGATTACCCGCATGAAAGAGTACGGCCAGCTGCGTTTTCGCGTTTCACTGGGCAACTATTTTACCGGTCCTGGCAGTATTGCCCGATCCTATCGTACGGCGAAAACGACGAtggt                                                                            <  1:9498898/140‑1 (MQ=255)
                                                            gaTCATCGTAAGCGAGTTGAACAACTGATTACCCGCATGAAAGAGTACGGCCAGCTGCGTTTTCGCGTTTCACTGGGCAACTATTTTACCGGGCCTGGCAGTATTGCCCGATCCTATCGTACGGCGAAAACGACGAtggt                                                                            <  1:8971662/140‑1 (MQ=255)
                                                              tcatcGTAAGCGAGTTGAACAACTGATTACCCGCATGAAAGAGTACGGCCAGCTGCGTTTTCGCGTTTCACTGGGCAACTATTTTACCGGTCCTGGCAGTATTGCCCGATCCTATCGTACGGCGAAAACGACGAtggtgg                                                                          <  2:967776/140‑1 (MQ=255)
                                                              tcatcGTAAGCGAGTTGAACAACTGATTACCCGCATGAAAGAGTACGGCCAGCTGCGTTTTCGCGTTTCACTGGGCAACTATTTTACCGGTCCTGGCAGTATTGCCCGATCCTATCGTACGGCGAAAACGACGAtggtgg                                                                          <  1:11270141/140‑1 (MQ=255)
                                                              tcatcGTAAGCGAGTTGAACAACTGATTACCCGCATGAAAGAGTACGGCCAGCTGCGTTTTCGCGTTTCACTGGGCAACTATTTTACCGGTCCTGGCAGTATTGCCCGATCCTATCGTACGGCGAAAACGACGAtggtgg                                                                          <  1:6802584/140‑1 (MQ=255)
                                                              tcatcGTAAGCGAGTTGAACAACTGATTACCCGCATGAAAGAGTACGGCCAGCTGCGTTTTCGCGTTTCACTGGGCAACTATTTTACCGGTCCTGGCAGTATTGCCCGATCCTATCGTACGGCGAAAACGACGAtggtgg                                                                          <  1:4893791/140‑1 (MQ=255)
                                                                 tcGTAAGCGAGTTGAACAACTGATTACCCGCATGAAAGAGTACGGCCAGCTGCGTTTTCGCGTTTCACTGGGCAACTATTTTACCGGTCCTGGCAGTATTGCCCGATCCTATCGTACGGCGAAAACGACGAtggtggtgg                                                                       >  1:2275415/1‑140 (MQ=255)
                                                                   gTAAGCGAGTTGAACAACTGATTACCCGCATGAAAGAGTACGGCCAGCTGCGTTTTCGCGTTTCACTGGGCAACTATTTTACCGGTCCTGGCAGTATTGCCCGATCCTATCGTACGGCGAAAACGACGATGGTGGTGGGt                                                                     <  1:3492007/140‑1 (MQ=255)
                                                                      aGCGAGTTGTACAACTGATTACCCGCATGAACGAGTACGGCCAGCTGCGTTTTCGCGTTTCACTGGGCAACTATTGTACCGGTCCGGGCAGTATTGCCCGATCCTATCGTACGGCGAAAACGACGATGGTGGTGGGTaaa                                                                  <  2:8224237/140‑1 (MQ=255)
                                                                      aGCGAGTTGAACAACTGATTACCCGCATGAAAGAGTACGGCCAGCTGCGTTTTCGCGTTTCACTGGGCAACTATTTTACCGGTCCTGGCAGTATTGCCCGATCCTATCGTACGGCGAAAACGACGATGGTGGTGGGTaaa                                                                  <  1:1592676/140‑1 (MQ=255)
                                                                        cGAGTTGAACAACTGATTACCCGCATGAAAGAGTACGGCCAGCTGCGTTTTCGCGTTTCACTGGGCAACTATTTTACCGGTCCTGGCAGTATTGCCCGATCCTATCGTACGGCGAAAACGACGATGGTGGTGGGTAAACa                                                                >  2:67073/1‑140 (MQ=255)
                                                                        cGAGTTGAACAACTGATTACCCGCATGAAAGAGTACGGCCAGCTGCGTTTTCGCGTTTCACTGGGCAACTATTTTACCGGTCCTGGCAGTATTGCCCGATCCTATCGTACGGCGAAAACGACGATGGTGGTGGGTAAACa                                                                <  1:6601090/140‑1 (MQ=255)
                                                                           gTTGAACAACTGATTACCCTCATGAAAGAGTACGGCCAGCTGCGTTTTCGCGTTTCACTGGTCAACTATTTTACCGGTCCTGGCAGTATTGCCCGATCCTATCGTACGGCGAAAACGACGATGGTGGTGGGTAAACAGCg                                                             <  2:6531408/140‑1 (MQ=255)
                                                                           gTTGAACAACTGATGACCCGCATGAAAGAGTACGGCCAGCTGCGATTTCGCGTTTCACTGGGCAACTATTTTACCGGTCCTGGCAGTATTGCCCGATCCTATCGTACGTCGAAAACGACGCTGGTGGTGGGTAAACAGCg                                                             <  2:702806/140‑1 (MQ=255)
                                                                            ttGAACAACTGATTACCCGCATGAAAGAGTACGGCCAGCTGCGTTTTCGCGTTTCACTGGGCAACTATTTTACCGGTCCTGGCAGTATTGCCCGATCCTATCGTACGGCGAAAACGACGATGGTGGTGGGGAAACAGCgg                                                            >  2:9132540/1‑140 (MQ=255)
                                                                                   acTGATTACCCCCATGAAAGAGTACGGCCAGCTGCCTTTTCGCGTTTCACTGGGCAACTATTTTACCGGTCCTGGCAGTATGGCCCGATCCTATCGTACGGCGAAAACGACGAAGGTGGTGGGTAAACAGCGGATGCCAg                                                     <  1:5548752/140‑1 (MQ=255)
                                                                                    cTGATTACCCGCATGAAAGAGTACGGCCAGCTGCGTTTTCGCGTTTCACTGGGCAACTATTTTa                                                                                                                                <  1:8053580/64‑1 (MQ=255)
                                                                                      gATTACCCGCATGAAAGAGTACGGCCAGCTGCGTTTTCGCGTTTCACTGGGCAACTATTTTACCGGTCCTGGCAGTATTGCCCGATCCTATCGTACGGCGAAAACGACGATGGTGGTGGGTAAACAGCGGATGCCAGaaa                                                  >  1:5317723/1‑140 (MQ=255)
                                                                                       aTTACCCGCATGAAAGAGTACGGCCAGCTGCGTTTTCGCGTTTCACTGGGCAACTATTTTACCGGTCCTGGCAGTATTGCCCGATCCTATCGTACGGCGAAAACGACGATGGTGGTGGGTAAACAGCGGATGCCAGAAAg                                                 >  2:4998883/1‑140 (MQ=255)
                                                                                        ttACCCGCATGATAGAGTACGGCCAGCTGCGTTTTCGCGTTTCACTGGGCAACTATTTTACCGGTCCTGGCAGTATTGCCCGATCCTATCGTACGGCGAAAACGACGATGGTGGTGGGTAAACAGCGGATGCCAGAAAGt                                                <  2:898586/140‑1 (MQ=255)
                                                                                         tACCCGCATGAAAGAGTACGGCCAGATGCGTTTTCGCGTTTCACTGGGCAACTATTTTACCGGTCATGGCAGTATAGACAGATCCTATCGTACGGCGAAAACGACGATTGTGGTGGGTAAACAGCTGATGCCAGAAAGTc                                               >  2:1498965/1‑140 (MQ=255)
                                                                                          aCCCGCATGAAAGAGTACGGCCAGCTGCGTTTTCGCGTTTCACTGGGCAACTATTTTACCGGTCCTGGCAGTATTGCCCGATCCTATCGTACGGCGAAAACGACGATGGTGGTGGGTAAACAGCGGATGCCAGAAAGTCg                                              <  1:10506741/140‑1 (MQ=255)
                                                                                             cGCATGAAAGAGTACGGCCAGCTGCGTTTTCGCGTTTCACTGGGCAACTATTTTACCGGTCCTGGCAGTATTGCCCGATCCTATCGTACGGCGAAAACGACGATGGTGGTGGGTAAACAGCGGATGCCAGAAAGTCgctg                                           <  1:6127754/140‑1 (MQ=255)
                                                                                               cATGAAAGAGTACGGCCAGCTGCGTTTTCGCGTTTCACTGGGCAACTATTTTACCGGTCCTGGCAGTATTGCCCGATCCTATCGTACGGCGAAAACGACGATGGTGGTGGGTAAACAGCGGATGCCAGAAAGTCgctgct                                         >  2:2085535/1‑140 (MQ=255)
                                                                                                 tGAAAGAGTACGGCCAGCTGCGTTTTCGCGTTTCACTGGGCAACTATTTTACCGGTCCTGGCAGTATTGCCCGATCCTATCGTACGGCGAAAACGACGATGGTGGTGGGTAAACAGCGGATGCCAGAAAGTCGCTGCTAt                                       >  1:8799088/1‑140 (MQ=255)
                                                                                                   aaaGAGTACGGCCATCTGCGTTTTCGCGTTTCACTGGGCAACTATTTTACCGGTCCTGGCAGTATTGCCCGATCCTATCGTACGGCGAAAACGACGATGGTGGTGGGTAAACAGCGGATGCCAGAAAGTCGCTGCTAttt                                     <  2:3218094/140‑1 (MQ=255)
                                                                                                        gTACGGCCAGCTGCGTTTTCGCGTTTCACTGGGCAACTATTTTACCGGTCCTGGCAGTATTGCCCGATCCTATCGTACGGCGAAAACGACGATGGTGGTGGGTAAACAGCGGATGCCAGAAAGTCGCTGCTATTTTTATc                                <  1:5720913/140‑1 (MQ=255)
                                                                                                        gTACGGCCAGCTGCGTTTTCGCGTTTCACTGGGCAACTATTTTACCGGTCCTGGCAGTATTGCCCGATCCTATCGTACGGCGAAAACGACGATGGTGGTGGGTAAACAGCGGATGCCAGAAAGTCGCTGCTATTTTTATc                                <  1:11024137/140‑1 (MQ=255)
                                                                                                        gTACGGCCAGCTGCGTTTTCGCGTTTCACTGGGCAACTATTTTACCGGTCCTGGCAGTATTGCCCGATCCTATCGTACGGCGAAAACGACGATGGTGGTGGGTAAACAGCGGATGCCAGAAAGTCGCTGCTATTTTTATc                                <  2:5542599/140‑1 (MQ=255)
                                                                                                         tACGGCCAGCTGCGTTTTCGCGTTTCACTGGGCAACTATTTTACCGGTCCTGGCAGTATTGCCCGATCCTATCGTACGGCGAAAACGACGATGGTGGTGGGTAAACAGCGGATGCCAGAAAGTCGCTGCTATTTTTATCa                               >  2:5684474/1‑140 (MQ=255)
                                                                                                         tACGGCCAGCTGCGTTTTCGCGTTTCACTGGGCAACTATTTTACCGGTCCTGGCAGTATTGCCCGATCCTATCGTACGGCGAAAACGACGATGGTGGTGGGTAAACAGCGGATGCCAGAAAGTCGCTGCTATTTTTATCa                               >  1:6964596/1‑140 (MQ=255)
                                                                                                             gCCAGCTGCGTTTTCGCGTTTCACTGGGCAACTATTTTACCGGTCCTGGCAGTATTGCCCGATCCTATCGTACGGCGAAAACGACGATGGTGGTGGGTAAACAGCGGATGCCAGAAAGTCGCTGCTATTTTTATCAGGAt                           <  1:3285922/140‑1 (MQ=255)
                                                                                                             gCCAGCTGCGTATTCGCGTGTCACTGGGCAACTATTTTACCGGTCCTGGCAGTATTGCCCGATCCTATCGTACGGCGAAAACGACGAGGGTGGTGGGTACACTGCGGATGCCAGAAAGTCGCTGCTATTTTTATCAGGAt                           <  2:1886762/140‑1 (MQ=255)
                                                                                                                 gCTGCGTTTTCGCGTTTCACTGGGCAACTATTTTACCGGTCCTGGCAGTATTGCCCGATCCTATCGTACGGCGAAAACGACGATGGTGGTGGGTAAACAGCGGATGCCAGAAAGTCGCTGCTATTTTTATCAGGATCTGa                       >  2:8840846/1‑140 (MQ=255)
                                                                                                                 gCTGCGTTTTCGCGTTTCACTGGGCAACTATTTTACCGGTCCTGGCAGTATTGCCCGATCCTATCGTACGGCGAAAACGACGATGGTGGTGGGTAAACAGCGGATGCCAGAAAGTCGCTGCTATTTTTATCAGGATCTGa                       >  2:10977237/1‑140 (MQ=255)
                                                                                                                  cTGCGTTTTCGCGTTTCACTGGGCAACTATTTTACCGGTCCTGGCAGTATTGCCCGATCCTATCGTACGGCGAAAACGACGATGGTGGTGGGTAAACAGCGGATGCCAGAAAGTCGCTGCTATTTTTATCAGGATCTGAt                      <  2:2629883/140‑1 (MQ=255)
                                                                                                                  cTGCGTTTTCGCGTTTCACTGGGCAACTATTTTACCGGTCCTGGCAGTATTGCCCGATCCTATCGTACGGCGAAAACGACGATGGTGGTGGGTAAACAGCGGATGCCAGAAAGTCGCTGCTATTTTTATCAGGATCTGAt                      <  1:1733860/140‑1 (MQ=255)
                                                                                                                  cTGCGTTTTCGCGTTTCACTGGGCAACTATTTTACCGGTCCTGGCAGTATTGCCCGATCCTATCGTACGGCGAAAACGACGATGGTGGTGGGTAAACAGCGGATGCCAGAAAGTCGCTGCTATTTTTATCAGGATCTGAt                      <  1:10849031/140‑1 (MQ=255)
                                                                                                                  cTGCGTTTTCGCGTTTCACTGGGCAACTATTTTACCGGTCCTGGCAGTATTGCCCGATCCTATCGTACGGCGAAAACGACGATGGTGGTGGGTAAACAGCGGATGCCAGAAAGTCGCTGCTATTTTTATCAGGATCTGAt                      <  1:2833106/140‑1 (MQ=255)
                                                                                                                     cGTTTTCGCGTTTCACTGGGCAACTATTTTACCGGTCCTGGCAGTATTGCCCGATCCTATCGTACGGCGAAAACGACGATGGTGGTGGGTAAACAGCGGATGCCAGAAAGTCGCTGCTATTTTTATCAGGATCTGATGtt                   <  1:2093701/140‑1 (MQ=255)
                                                                                                                     cGTTTTCGCGTTTCACTGGGCAACTATTTTACCGGTCCTGGCAGTATTGCCCGATCCTATCGTACGGCGAAAACGACGATGGTGGTGGGTAAACAGCGGATGCCAGAAAGTCGCTGCTATTTTTATCAGGATCTGATGtt                   <  2:6195556/140‑1 (MQ=255)
                                                                                                                       ttttCGCGTTTCACTGGGCAACTATTTTACCGGTCCTGGCAGTATTGCCCGATCCTATCGTACGGCGAAAACGACGATGGTGGTGGGTAAACAGCGGATGCCAGAAAGTCGCTGCTATTTTTATCAGGATCTGATGTTAc                 >  1:8358669/1‑140 (MQ=255)
                                                                                                                          tCGCGTTTCACTGGGCAACTATTTTACCGGTCCTGGCAGTATTGCCCGATCCTATCGTACGGCGAAAACGACGATGGTGGTGGGTAAACAGCGGATGCCAGAAAGTCGCTGCTATTTTTATCAGGATCTGATGTTACCtg              >  2:3927480/1‑140 (MQ=255)
                                                                                                                          tCGCGTTTCACTGGGCAACTATTTTACCGGTCCTGGCAGTATTGCCCGATCCTATCGTACGGCGAAAACGACGATGGTGGTGGGTAAACAGCGGATGCCAGAAAGACCCTGCTATTTTTATCAGGATCGGATGTTACCtg              <  2:4393271/140‑1 (MQ=255)
                                                                                                                            gcgTTTCACTGGGCATCTATTTTACCGGTCCTGGCTGTATTGGCCGATCCTATCGTACGGCGTATACGACGATGGTGGTGGGTAAACAGCGGATGCCAGAAAGTCGCTGCTATTTTTATCAGGATCTGTTGTTACCtgtg            <  2:10095359/140‑1 (MQ=255)
                                                                                                                            gcgTTTCACTGGGCAACTATTTTACCGGTCCTGGCAGTATTGCCCGATCCTATCGTACGGCGAAAACGACGATGGTGGTGGGTAAACAGCGGATGCCAGAAAGTCGCTGCTATTTTTATCAGGATCTGATGTTACCtgtg            <  1:3701839/140‑1 (MQ=255)
                                                                                                                                  cACTGGGCAACTATTTTACCGGTCCTGGCAGTATTGCACGATACTATCGTACGGCTAACACGACGATGGTGGTGTGTAAACAGCGGATGCCAGAAAGTCGCGGCTATTTTTATCAGGATCTGATGTTACCTGTGTTACTc      <  2:5778924/140‑1 (MQ=255)
                                                                                                                                  cACTGGGCAACTACCGTACCGGTCCTGGCAGTAGTGCCCGAGCCTATCGTACGGCGAAACCGACGATGGTGGTGGGGAACCAGCGGATGCCAGAACGACGCAGCTATTTTTATCAGGATCTGAAGTTACCAGTGTTACTc      <  2:2935629/140‑1 (MQ=255)
                                                                                                                                     tGGGCAACTATTTTACCGGTCCTGGCAGTATTGCCCGATCCTATCGTACGGCGAAAACGACGATGGTGGTGGGTAAACAGCGGATGCCAGAAAGTCGCTGCTATTTTTATCAGGATCTGATGTTACCTGTGTTACTCGAc   <  2:8012103/140‑1 (MQ=255)
                                                                                                                                     tGGGCAACTATTTTACCGGTCCTGGCAGNATTGCCCGATCCTATCGTACGGCGAAAACGACGATGGTGGTGGGTAAACAGCGGATGCCAGAAAGTCGCTGCTATTTTTATCAGGATCTGATGTTACCTGTGTTACTCGAc   <  1:5949063/140‑1 (MQ=255)
                                                                                                                                     tGGGCAACGATTTTACCGGTCCTGGCAGGAGTGCCCGATCCTATCGTACGGCGAAAACGACGATGGTGGTGGGTAAACAGCGGATGCCAGAAAGTCGCTGCTATTTTTATCAGGATCTGATGTTACCTGTGTTACTCGAc   <  2:7537518/140‑1 (MQ=255)
                                                                                                                                         |                                                                                                                                        
CTAACCGAAATGGTGGTGTTGAAACCGGCGTTGAACTCTTTTGGGCGCTGGGATGCAGAAGATCATCGTAAGCGAGTTGAACAACTGATTACCCGCATGAAAGAGTACGGCCAGCTGCGTTTTCGCGTTTCACTGGGTAACTATTTTACCGGTCCTGGCAGTATTGCCCGATCCTATCGTACGGCGAAAACGACGATGGTGGTGGGTAAACAGCGGATGCCAGAAAGTCGCTGCTATTTTTATCAGGATCTGATGTTACCTGTGTTACTCGACA  >  NZ_CP025268/182909‑183182

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑