BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NZ_CP025268	2,186,098	A→G	322 (TAA→TAG) L241L (TTA→CTA)	yegV → yegW ←	carbohydrate kinase family protein GntR family transcriptional regulator

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NZ_CP025268	2,186,098	0	A	G	99.7%	2402.1 / NA	697	322 (TAA→TAG) L241L (TTA→CTA)	yegV yegW	carbohydrate kinase family protein GntR family transcriptional regulator
Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (356/338); minor base T (1/1); total (357/340)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 697 total aligned reads displayed.

GCCGGGCTGGCCTCTGGTCTGCCACTGGCGGATGCCGTATTACTGGGCAATGCAGTGGCGTCGTGGGTTGTCGGGCATCGGGGCGGTGATTGTGCGCCAACGCGCGAGGAATTACTCCTCGCACACAAAAACGTATAAATCGCTGCGACAGTGGCTAATGCTGTACTCAATAGGCCGTTGCTGTTGGTCAAGCGCCACTTGCTTGATCACCAGCACCGGTATTTTGCTATCTAACTGAATATGTGACTGAAACTCGGCATCCGGCATCCGGGCG  >  NZ_CP025268/2185961‑2186234

     gCTGGCCTCTGGTCTGCCACTGGCGGATGCCGTATTACTGGGCAATGCAGTGGCGTCGTGGGTTGTCGGGCATCGGGGCGGTGATTGTGCGCCAACGCGCGAGGAACTACTCCTCGCACACAAAAACGTATAGATCGCTg                                                                                                                                   <  1:8982769/140‑1 (MQ=255)

     gCTGGCCTCTGGTCTGCCACTGGCGGATGCCGTATTACTGGGCAATGCAGTGGCGTCGTGGGTTGTCGGGCATCGGGGCGGTGATTGTGCGCCAACGCGCGAGGAACTACTCCTCGCACACAAAAACGTATAGATCGCTg                                                                                                                                   <  1:9922909/140‑1 (MQ=255)

      cTGGCCTCTGGTCTGCCACTGGCGGATGCCGTATTACTGTGCTATGCAGTGGCGTCGTGGGTTGTCGGGCATCGGGGCGGTGATTGTGCTCCAACGCGCGAGGAACTACTCCTCGCACACAAAAACGTATAGATCGCTGc                                                                                                                                  <  2:730419/140‑1 (MQ=255)

        ggCCTCTGGTCTGCCACTGGCGGATGCCGGATTACGGGGCCCTGCTGTGGCGTCGTGGGTTGTCGGGCCTCGGGGCGGTGAGTGTGCGCGTGCGCGCGAGGTGCTACTCCTCGCACACAAAAACGTAGAGAGCGGTGCgg                                                                                                                                >  2:6795754/1‑139 (MQ=255)

          ccTCTGGTCTGCCACTGGCGGATGCCGTATTACTGGGCAATGCAGTGGCGTCGTGGGTTGTCGGGCATCGGGGCGGTGATTGTGCGCCAACGCGCGAGGAACTACTCCTCGCACACAAAAACGTATAGATCGCTGCGACa                                                                                                                              <  1:4252807/140‑1 (MQ=255)

          ccTCTGGTCTGCCACTGGCGGATGCCGTATTACTGGGCAATGCAGTGGCGTCGTGGGTTGTCGGGCATCGGGGCGGTGATTGTGCGCCAACGCGCGAGGAACTACTCCTCGCACACAAAAACGTAGAGATCGCTGCGACa                                                                                                                              <  2:3883299/140‑1 (MQ=255)

          ccTCTGGTCGGCCACTGGCGGATGCCGTAGTACTGCGCTATGCAGTGGCGTCGTGGGTTGTCGTGCATCGGGGCGGTGATTGTGCGCCATCGCGCGAGGAACTACTCCTCGCACACAACAACGTATTGATCGCTGCGACa                                                                                                                              <  2:7152265/140‑1 (MQ=255)

               ggTCTGCCACTGGCGGATGCCGTATTACTGGGCAATGCAGTGGCGTCGTGGGTTGTCGGGCATCGGGGCGGTGATTGTGCGCCAACGCGCGAGGAACTACTCCTCGCACACAAAAACGTATAGATCGCTGCGACAGTGGc                                                                                                                         <  1:7772176/140‑1 (MQ=255)

                 tCTGCCACTGGCGGATGCCGTATTACTGGGCAATGCAGTGGCGTCGTGGGTTGTCGGGCATCGGGGCGGTGATTGTGCGCCAACGCGCGAGGAACTACTCCTCGCACACAAAAACGTATAGATCGCTGCGACAGTGGCTa                                                                                                                       <  2:5040295/140‑1 (MQ=255)

                 tCTGCCACTGGCGGATGCCGAATTCCTGCGCCAGGCAGTGGCGTCGTGGGATGTCGGGCATCGGGGCGCTGATCGTGCGCCACCGCGCGAGGAACTACTCCTCGCACACAAAACCGTAAAGCTCGCTCCGACAGTGGCTa                                                                                                                       <  2:10807046/140‑1 (MQ=255)

                    gCCACTGGCGGATGCCGTATTACTGGGCAATGCAGTGGCGTCGTGGGTTGTCGGGCATCGGGGCGGTGATTGTGCGCCAACGCGCGAGGAACTACTCCTCGCACACAAAAACGTATAGATCGCTGCGACAGTGGCTAATg                                                                                                                    <  1:5369558/140‑1 (MQ=255)

                    gCCACTGGCGGATGCCGTATTACTGGGCAATGCAGTGGCGTCGTGGGTTGTCGGGCATCGGGGCGGTGATTGTGCGCCAACGCGCGAGGAACTACTCCTCGCACACAAAAACGTATAGATCGCTGCGACAGTGGCTAATg                                                                                                                    <  1:5201808/140‑1 (MQ=255)

                    gCCACTGGCGGATGCCGTATTACTGGGCAATGCAGTGGCGTCGTGGGTTGTCGGGCATCGGGGCGGTGATTGTGCGCCAACGCGCGAGGAACTACTCCTCGCACACAAAAACGTATAGATCGCTGCGACAGTGGCTAATg                                                                                                                    <  1:7869787/140‑1 (MQ=255)

                    gCCACTGGCGGATGCCGTATTACTGGGCAATGCAGTGGCGTCGTGGGTTGTCGGGCATCGGGGCGGTGATTGTGCGCCAACGCGCGAGGAACTACTCCTCGCACACAAAAACGTATAGATCGCTGCGACAGTGGCTAATg                                                                                                                    <  1:9425554/140‑1 (MQ=255)

                    gCCACTGGCGGATGCCGTATTACTGGGCAATGCAGTGGCGTCGTGGGTTGTCGGGCATCGGGGCGGTGATTGTGCGCCAACGCGCGAGGAACTACTCCTCGCACACAAAAACGTATAGATCGCTGCGACAGTGGCTAATg                                                                                                                    <  2:1197578/140‑1 (MQ=255)

                     ccACTGGCGGATGCCGTATTACTGGGCAATGCAGTGGCGTCGTGGGTTGTCGGGCATCGGGGCGGTGATTGTGCGCCAACGCGCGAGGAACTACTCCTCGCACACAAAAACGTATAGATCGCTGCGACAGTGGCTAATg                                                                                                                    <  1:566262/139‑1 (MQ=255)

                     ccACTGGCGGATGCCGTATTACTGGGCAATGCAGTGGCGTCGTGGGTTGTCGGGCATCGGGGCGGTGATTGTGCGCCAACGCGCGAGGAACTACTCCTCGCACACAAAAACGTATAGATCGCTGCGACAGTGGCTAATGc                                                                                                                   >  1:2980704/1‑140 (MQ=255)

                     ccACTGGCGGATGCCGTATTACTGGGCAATGCAGTGGCGTCGTGGGTTGTCGGGCATCGGGGCGGTGAGTGTGCGCCAACGCGCGAGGAACTACTCCTCGCACACAAAAACGTATAGATCGCTGCGACAGGGGCTAATGc                                                                                                                   >  1:10842515/1‑140 (MQ=255)

                      cACTGGCGGATGCCGTATTACTGGGCAATGCAGTGGCGTCGTGGGTTGTCGGGCATCGGGGCGGTGATTGTGCGCCAACGCGCGAGGAACTACTCCTCGCACACAAAAACGTATAGATCGCTGCGACAGTGGCTAATGCt                                                                                                                  <  2:5830215/140‑1 (MQ=255)

                      cACTGGCGGATGCCGTATTACTGGGCAATGCAGTGGCGTCGTGGGTTGTCGGGCATCGGGGCGGTGATTGTGCGCCAACGCGCGAGGAACTACTCCTCGCACACAAAAACGTATAGATCGCTGCGACAGTGGCTAATGCt                                                                                                                  <  1:389568/140‑1 (MQ=255)

                        cTGGCGGATGCCGTATTACTGGGCAATGCAGTGGCGTCGTGGGTTGTCGGGCATCGGGGCGGTGATTGTGCGCCAACGCGCGAGGAACTACTCCTCGCACACAAAAACGTATAGATCGCTGCGACAGTGGCTAATGCTGt                                                                                                                <  2:1608131/140‑1 (MQ=255)

                         tGGCGGATGCCGTATTACTGGGCAATGCAGTGGCGTCGTGGGTTGTCGGGCATCGGGGCGGTGATTGTGCGCCAACGCGCGAGGAACTACTCCTCGCACACAAAAACGTATAGATCGCTGCGACAGTGGCTAATGCTGTa                                                                                                               <  1:4439500/140‑1 (MQ=255)

                         tGGCGGATGCCGTATTACTGGGCAATGCAGTGGCGTCGTGGGTTGTCGGGCATCGGGGCGGTGATTGTGCGCCAACGCGCGAGGAACTACTCCTCGCACACAAAAACGTATAGATCGCTGCGACAGTGGCTAATGCTGTa                                                                                                               <  1:5891888/140‑1 (MQ=255)

                         tGGCGGATGCCGTATTACTGGGCAATGCAGTGGCGTCGTGGGTTGTCGGGCATCGGGGCGGTGATTGTGCGCCAACGCGCGAGGAACTACTCCTCGCACACAAAAACGTATAGATCGCTGCGACAGTGGCTAATGCTGTa                                                                                                               <  2:4523300/140‑1 (MQ=255)

                          ggCGGATGCCGTATTACTGGGCAATGCAGTGGCGTCGTGGGTTGTCGGGCATCGGGGCGGTGATTGTGCGCCAACGCGCGAGGAACTACTCCTCGCACACAAAAACGTATAGATCGCTGCGACAGTGGCTAATGCTGTAc                                                                                                              >  1:130336/1‑140 (MQ=255)

                           gCGGATGCCGTATTACTGGGCAATGCAGTGGCGTCGTGGGTTGTCGGGCATCGGGGCGGTGATTGTGCGCCAACGCGCGAGGACCTACTCCTCGCACACAAAAACGTATAGATCGCTGCGACAGTGGCTCATGCTGTACt                                                                                                             >  1:1027381/1‑140 (MQ=255)

                               aTGCCGTATTACTGGGCAATGCAGTGGCGTCGTGGGTTGTCGGGCATCGGGGCGGTGATTGTGCGCCAACGCGCGAGGAACTACTCCTCGCACACAAAAACGTATAGATCGCTGCGACAGTGGCTAATGCTGTACTCAAt                                                                                                         <  1:7997359/140‑1 (MQ=255)

                               aTGCCGTATTACTGGGCAATGCAGTGGCGTCGTGGGTTGTCGGGCATCGGGGCGGTGATTGTGCGCCAACGCGCGAGGAACTACTCCTCGCACACAAAAACGTATAGATCGCTGCGACAGTGGCTAATGCTGTACTCAAt                                                                                                         >  2:2135454/1‑140 (MQ=255)

                               aTGCCGTATTACTGGGCAATGCAGTGGCGTCGTGGGTTGTCGGGCATCGGGGCGGTGATTGTGCGCCAACGCGCGAGGAACTACTCCTCGCACACAAAAACGTATAGATCGCTGCGACAGTGGCTAATGCTGTACTCAAt                                                                                                         >  1:5054624/1‑140 (MQ=255)

                                tGCCGTATTTCGGGGCAATGCAGTGGCGGCGTGGGTTGTCGGGCATCGGGGCGGTGATTGTGGGGCTAGGCGCGAGGTACTACTGCTCGCACTCCGACTCGGTTCGTTCGCTGCGCCGGTGGCTAATGGTGGAcgctagg                                                                                                        >  2:8070562/1‑134 (MQ=255)

                                tGCCGTATTACTGGGCAATGCAGTGGCGTCGTGGGTTGTCGGGCATCGGGGCGGTGATTGTGCGCCAACGCGCGAGGAACTACTCCTCGCACACAAAAACGTATAGATCGCTGCGACAGTGGCTAATGCTGTACTCAATa                                                                                                        <  1:2619508/140‑1 (MQ=255)

                                     tATTACTGGGCAATGCAGTGGCGTCGTGGGTTGTCGGGCATCGGGGCGGTGATTGTGCGCCAACGCGCGAGGAACTACTCCTCGCACACAAAAACGTATAGATCGCTGCGACAGTGGCTCATGCTGTACTCAATAGGCCg                                                                                                   >  1:10499495/1‑140 (MQ=255)

                                     tATTACTGGGCAATGCAGTGGCGTCGTGGGTTGTCGGGCATCGGGGCGGTGATTGTGCGCCAACGCGCGAGGAACTACTCCTCGCACACAAAAACGTATAGATCGCTGCGACAGTGGCTAATGCTGTACTCAATAGGCCg                                                                                                   <  2:8796738/140‑1 (MQ=255)

                                      aTTACTGGGCAATGCAGTGGCGTCGTGGGTTGTCGGGCATCGGGGCGGTGATTGTGCGCCAACGCGCGAGGAACTACTCCTCGCACACAAAAACGTATAGATCGCTGCGACAGTGGCTAATGCTGTACTCAATAGGCCGt                                                                                                  <  2:1875641/140‑1 (MQ=255)

                                      aTTACTGGGCAATGCAGTGGCGTCGTGGGTTGTCGGGCATCGGGGCGGTGATTGTGCGCCAACGCGCGAGGAACTACTCCTCGCACACAAAAACGTATAGATCGCTGCGACAGTGGCTAATGCTGTACTCAATAGGCCGt                                                                                                  <  2:2835595/140‑1 (MQ=255)

                                          cTGGGCAATGCAGTGGCGTCGTGGGTTGTCGGGCATCGGGGCGGTGATTGTGCGCCAACGCGCGAGGAACTACTCCTCGCACACAAAAACGTATAGATCGCTGCGACAGTGGCTAATGCTGTACTCAATAGGCCGTTGCt                                                                                              <  1:7249066/140‑1 (MQ=255)

                                             ggCAATGCAGTGGCGTCGTGGGTTGTCGGGCATCGGGGCGGTGATTGTGCGCCAACGCGCGAGGACCTACTCCTCGCACACACAATCGGATAGATCGCTGCGACTGTGGCTCAGGCTGTACTCACTAGGCCGTTGCTGtg                                                                                           >  2:7897001/1‑139 (MQ=255)

                                             ggCAATGCAGTGGCGTCGTGGGTTGTCGGGCATCGGGGCGGTGATTGTGCGCCAACGCGCGAGGAACTACTCCTCGCACACAAAAACGTATAGATCGCTGCGACAGTGGCTAATGCTGTACTCAATAGGCCGTTGCTGtt                                                                                           >  1:10997229/1‑140 (MQ=255)

                                             ggCAATGCAGTGGCGTCGTGGGTTGTCGGGCATCGGGGCGGTGATTGTGCGCCAACGCGCGAGGAACTACTCCTCGCACACAAAAACGTATAGATCGCTGCGACAGTGGCTAATGCTGTACTCAATAGGCCGTTGCTGtt                                                                                           >  2:5987345/1‑140 (MQ=255)

                                             ggCAATGCAGTGGCGTCGTGGGTTGTCGGGCATCGGGGCGGTGATTGTGCGCCAACGCGCGAGGAACTACTCCTCGCACACAAAAACGTATAGATCGCTGCGACAGTGGCTAATGCTGTACTCAATAGGCCGTTGCTGtt                                                                                           >  2:9017138/1‑140 (MQ=255)

                                             ggCAATGCAGTGGCGTCGTGGGTTGTCGGGCATCGGGGCGGTGATTGTGCGCCAACGCGCGAGGAACTACTCCTCGCACACAAAAACGTATAGATCGCTGCGACAGTGGCTAATGCTGTACTCAATAGGCCGTTGCTGtg                                                                                           >  2:11239362/1‑139 (MQ=255)

                                               cAATGCAGTGGCGTCGTGGGTTGTCGGGCATCGGGGCGGTGATTGTGCGCCAACGCGCGAGGAACTACTCCTCGCACACAAAAACGTATAGATCGCTGCGACAGTGGCTAATGCTGTACTCAATAGGCCGTTGCTGTTgg                                                                                         >  1:8296315/1‑140 (MQ=255)

                                                 aTGCAGTGGCGTCGTGGGTTGTCGGGCATCGGGGCGGTGATTGTGCGCCAACGCGCGAGGAACTACTCCTCGCACACAAAATCGTATAGATCGCTGCGACAGTGGCTAATGCTGTACTCAATAGGCCGTTGCTGTTGGTc                                                                                       >  1:6219030/1‑140 (MQ=255)

                                                  tGCAGTTGCGTCGTGGGTTTTCGGGAATCGGGGAGTTGATTTTGAGCCAACGCGCGAGTAAATAATCCTCTCACACAAAAACTTATAGATCGCTGCGACAGTGGCTAATGATGTACTCAATAGGCAGTTGCTGTTGGTCa                                                                                      >  2:2611084/1‑140 (MQ=255)

                                                  tGCAGTGGCGTCGTGGGTTGTCGGGCATCGGGGCGGTGATTGTGCGCCAACGCGCGAGGAACTACTCCTCGCACACAAAAACGTATAGATCGCTGCGACAGTGGCTAATGCTGTCCTCAATAGGCCGTTGCTGTTGGTCa                                                                                      >  1:2272731/1‑140 (MQ=255)

                                                  tGCAGTGGCGTCGTGGGTTGTCGGGCATCGGGGCGGTGATTGTGCGCCAACGCGCGAGGAACTACTCCTCGCACACAAAAACGTATAGATCGCTGCGACAGTGGCTAATGCTGTACTCACTAGGCCGTTGCTGTTGGTCa                                                                                      >  1:11293749/1‑140 (MQ=255)

                                                  tGCAGTGGCGTCGTGGGTTGTCGGGCATCGGGGCGGTGATTGTGCGCCAACGCGCGAGGAACTACTCCTCGCACACAAAAACGTATAGATCGCTGCGACAGTGGCTAATGCTGTACTCAATAGGCCGTTGCTGTTGGTCa                                                                                      >  1:343503/1‑140 (MQ=255)

                                                  tGCAGTGGCGTCGTGGGTTGTCGGGCATCGGGGCGGTGATTGTGCGCCAACGCGCGAGGAACTACTCCTCGCACACAAAAACGTATAGATCGCTGCGACAGTGGCTAATGCTGTACTCAATAGGCCGTTGCTGTTGGTCa                                                                                      >  2:5223054/1‑140 (MQ=255)

                                                  tGCAGTGGCGTCGTGGGTTGTCGGGCATCGGGGCGGTGATTGTGCGCCAACGCGCGAGGAACTACTCCTCGCACACAAAAACGTATAGATCGCTGCGACAGTGGCTAATGCTGTACTCAATAGGCCGTTGCTGTTGGTCa                                                                                      >  1:149724/1‑140 (MQ=255)

                                                    cAGTGGCGTCGTGGGTTGTCGGGCATCGGGGCGGTGATTGTGCGCCAACGCGCGAGGAACTACTCCTCGCACACAAAAACGTATAGATCGCTGCGACAGTGGCTAATGCTGTACTCAATAGGCCGTTGCTGTTGGTCAAg                                                                                    <  2:9468066/140‑1 (MQ=255)

                                                    cAGTGGCGTCGTGGGTTGGCGGGCATCGGGGCGGTGATTGTGCGCCAACGCGCGAGGAACTACTCCTCGCACACAAAAACGTATAGATCGCTGCGACAGTGGCTAATGCTGTACTCAATAGGCCGTTGCTGTTGGTCAAg                                                                                    <  2:9306217/140‑1 (MQ=255)

                                                      gTGGCGTCGTGGGTTGTCGGGCATCGGGGCGGTGATTGTGCGCCAACGCGCGAGGAACTACTCCTCGCACACAAAAACGTATAGATCGCTGCGACAGTGGCTAATGCTGTACTCAATAGGCCGTTGCTGTTGGTCAAgcg                                                                                  <  1:9226159/140‑1 (MQ=255)

                                                        ggCGTCGTGGGTTGTCGGGCATCGGGGCGGTGATTGTGCGCCAACGCGCGAGGAACTACTCCTCGCACACAAAAACGTATAGATCGCTGCGACAGTGGCTAATGCTGTACTCAATAGGCCGTTGCTGTTGGTCAAGCGcc                                                                                <  1:9482845/140‑1 (MQ=255)

                                                            tcgtGGGTTGTCGGGCATCGGGGCGGTGATTGTGCGCCACCGCGCGAGGAACTACTCCTCGCACACAACAACGTATAGATCGCTGCGACAGTGGCTAATGCTGTACTCAATAGGCCGTTGCTGTTGGTCAAGCGCCActt                                                                            <  2:6282273/140‑1 (MQ=255)

                                                            tcgtGGGTTGTCGGGCATCGGGGCGGTGATTGTGCGCCAACGCGCGAGGAACTACTCCTCGCACACAAAAACGTATAGATCGCTGCGACAGTGGCTAATGCTGTACTCAATAGGCCGTTGCTGTTGGTCAAGCGCCActt                                                                            >  1:4775418/1‑140 (MQ=255)

                                                            tcgtGGGTTGTCGGGCATCGGGGCGGGGATTGTGCGCCAACGCGCGTGGAACTCCTCCTCGCACACAAAAACGTATAGATCGGTGCGACAGTGGCTCATGCTGTGCTCAATAGGCCGTTGCTGTGGGTCAAGCGccgcgt                                                                            >  2:8871198/1‑136 (MQ=255)

                                                               tGGGTTGTCGGGCATCGGGGCGGTGATTGTGCGCCAACGCGCGAGGAACTACTCCTCGCACACAAAAACGTATAGATCGCTGCGACAGTGGCTAATGCTGTACTCAATAGGCCGTTGCTGTTGGTCAAGCGCCActtgct                                                                         >  1:3652322/1‑140 (MQ=255)

                                                                 ggTTGTCGGGCATCGGGGCGGTGATTGTGCGCCAACGCGCGAGGAACTACTCCTCGCACACAAAATCGTATAGATCGCTGCGACAGTGGCTAATGCTGTACTCAATAGGCCGTTGCTGTTGGTCAAGCGCCActtgcttg                                                                       >  1:2774919/1‑140 (MQ=255)

                                                                 ggTTGTCGGGCATCGGGGCGGTGATTGTGCGCCAACGCGCGAGGAACTACTCCTCGCACACAAAAACGTATAGATCGCTGCGACAGTGGCTAATGCTGTACTCAATAGGCCGTTGCTGTTGGTCAAGCGCCActtgcttg                                                                       <  1:2372485/140‑1 (MQ=255)

                                                                 ggTTGTCGGGCATCGGGGCGGTGATTGTGCGCCAACGCGCGAGGAACTACTCCTCGCACACAAAAACGTATAGATCGCTGCGACAGTGGCTAATGCTGTACTCAATAGGCCGTTGCTGTTGGTCAAGCGCCActtgcttg                                                                       <  1:6781983/140‑1 (MQ=255)

                                                                 ggTTGTCGGGCATCGGGGCGGTGATTGTGCGCCAACGCGCGAGGAACTACTCCTCGCACACAAAAACGTATAGATCGCTGCGACAGTGGCTAATGCTGTACTCAATAGGCCGTTGCTGTTGGTCAAGCGCCActtgcttg                                                                       >  2:3114924/1‑140 (MQ=255)

                                                                   ttGTCGGGCATCGGGGCGGTGATTGTGCGCCAACGCGCGAGGAACTACTCCTCGCACACAAAAACGTATAGATCGCTGCGACAGTGGCTAATGCTGTACTCAATAGGCCGTTGCTGTTGGTCAAGCGCCACTTGCTTGAt                                                                     >  1:7053209/1‑140 (MQ=255)

                                                                      tCGGGCATCGGGGCGGTGATTGTGCGCCAACGCGCGAGGAACTACTCCTCGCACACAAAAACGTATAGATCGCTGCGACa                                                                                                                              >  1:6439123/1‑80 (MQ=255)

                                                                      tCGGGCATCGGGGCGGTGATTGTGCGCCAACGCGCGAGGAACTACTCCTCGCACACAAAAACGTATAGATCGCTGCGACAGTGGCTAATGCTGTACTCAATAGGCCGTTGCTGTTGGTCAAGCGCCACTTGCTTGATCAc                                                                  >  2:6503889/1‑140 (MQ=255)

                                                                            aTCGGGGCGGTGATTGTGCGCCAACGCGCGAGGAACTACTCCTCGCACACAAACACGTATAGATCGCTGCGACAGTGGCTAATGCTGTACTCAATAGGCCGTTGCTGTTGGTCAAGCGCCACTTGCTTGATCACCAGCAc                                                            <  2:2329849/140‑1 (MQ=255)

                                                                            aTCGGGGCGGTGATTGTGCGCCAACGCGCGAGGAACTACTCCTCGCACACAAAAACGTATAGATCGCTGCGACAGTGGCTAATGCTGTACTCAATAGGCCGTTGCTGTTGGTCAAGCGCCACTTGCTTGATCACCAGCAc                                                            <  1:6888426/140‑1 (MQ=255)

                                                                            aTCGGGGCGGTGATTGTGCGCCAACGCGCGAGGAACTACTCCTCGCACACAAAAACGTATAGATCGCTGCGACAGTGGCTAATGCTGTACTCAATAGGCCGTTGCTGTTGGTCAAGCGCCACTTGCTTGATCACCAGCAc                                                            <  1:747366/140‑1 (MQ=255)

                                                                            aTCGGGGCGGTGATTGTGCGCCAACGCGCGAGGAACTACTCCTCGCACACAAAAACGTATAGATCGCTGCGACAGTGGCTAATGCTGTACTCAATAGGCCGTTGCTGTTGGTCAAGCGCCACTTGCTTGATCACCAGCAc                                                            <  2:5553451/140‑1 (MQ=255)

                                                                            aTCGGGGCGGTGATTGTGCGCCAACGCGCGAGGAACTACTCCTCGCACACAAAAACGTATAGATCGCTGCGACAGTGGCTAATGCTGTACTCAATAGGCCGTTGCTGTTGGTCAAGCGCCACTTGCTTGATCACCAGCAc                                                            <  1:9812143/140‑1 (MQ=255)

                                                                                gggCGGTGATTGTGCGCCAACGCGCGAGGAACTACTCCTCGCACACAAAAACGTATAGATCGCTGCGACAGTGGCTAATGCTGTACTCAATAGGCCGTTGCTGTTGGTCAAGCGCCACTTGCTTGATCACCAGCACCGGt                                                        >  1:5505803/1‑140 (MQ=255)

                                                                                    ggTGATTGTGCGCCAACGCGCGAGGAACTACTCCTCGCACACAAAATCGTATAGATCGCTGCGACAGTGGCTAATGCTGTACTCAATAGGCCGTTGCTGTTGGTCAAGCGCCACTTGCTTGATCACCAGCACCGGTAttt                                                    >  1:7671817/1‑140 (MQ=255)

                                                                                    ggTGATTGTGCGCCAACGCGCGAGGAACTACTCCTCGCACACAAAAACGTATAGATCGCTGCGACAGTGGCTAATGCTGTACTCAATAGGCCGTTGCTGTTGGTCAAGCGCCACTTGCTTGATCACCAGCACCGGTAttt                                                    >  2:7715045/1‑140 (MQ=255)

                                                                                    ggTGATTGTGCGCCAACGCGCGAGGAACTACTCCTCGCACACAAAAACGTATAGATCGCTGCGACAGTGGCTAATGCTGTACTCAATAGGCCGTTGCTGTTGGTCAAGCGCCACTTGCTTGATCACCAGCACCGGTAttt                                                    <  1:10002440/140‑1 (MQ=255)

                                                                                    ggTGATTGTGCGCCAACGCGCGAGGAACTACTCCTCGCACACAAAAACGTATAGATCGCTGCGACAGTGGCTAATGCTGTACTCAATAGGCCGTTGCTGTTGGTCAAGCGCCACTTGCTTGATCACCAGCACCGGTAttt                                                    <  1:1777417/140‑1 (MQ=255)

                                                                                      tGATTGTGCGCCAACGCGCGAGGAACTACTCCTCGCACACAAAAACGTATAGATCGCTGCGACAGTGGCTAATGCTGTACTCAATAGGCCGTTGCTGTTGGTCAAGCGCCACTTGCTTGATCACCAGCACCGGTATTTTg                                                  <  1:3242641/140‑1 (MQ=255)

                                                                                      ggagtgtgCGCCAACGCGCGAGGAACTACACCTCGCACACAAAAACGTATAGATCGCTGCGACAGTGGCTAATGCTGTACTCAATAGGCCGTTGCTGTTGGACAAGCGCCACTTGCTTGATCACCAGCACCGGTAGTTTg                                                  <  2:3383680/136‑1 (MQ=255)

                                                                                         ttGTGCGCCAACGCGCGAGGAACTACTCCTCGCACACAAAAACGTATAGATCGCTGCGACAGTGGCTAATGCTGTACTCAATAGGCCGTTGCTGTTGGTCAAGCGCCACTTGCTTGATCACCAGCACCGGTATTTTGCTa                                               <  2:241305/140‑1 (MQ=255)

                                                                                         tggtgCGCCAACGCGCGAGGCACGACTCCGCGCACCCAACACCGTCTCGCTCGCTGCGACAGTGGCGAAGGCAGTACGCAACCGGCCGTTGCGGTGGGTCAAGCGCCCCGTGCTTGATCACCAGCACCGGACTTTTGCtc                                               <  2:8202733/138‑2 (MQ=255)

                                                                                          cgagcgcCACCGCCCGACCACCTACCCCTCGCACACACCCACGTCTACACCGCTGCGACAGTGGCGAATGCTGTACTCAACAGGCCGGTGCTGTTGCACAAGCGCCACTTGCGTGATCACCCGCACCGGTATTTTGCTAt                                              <  2:10322620/137‑1 (MQ=255)

                                                                                           gtgCGCCAACGCGCGAGGAACTACTCCTCGCACACAAAAACGTATAGATCGCTGCGACAGTGGCTAATGCTGTACTCAATAGGCCGTTGCTGTTGGTCAAGCGCCACTTGCTTGATCACCAGCACCGGTATTTTGCTATc                                             >  2:10166672/1‑140 (MQ=255)

                                                                                            tgCGCCAACGCGCGAGGAACTACTCCTCGCACACAAAAACGTATAGATCGCTGCGACAGTGGCTAATGCTGTACTCAATAGGCCGTTGCTGTTGGTCAAGCGCCACTTGCTTGATCACCAGCACCGGTATTTTGCTATCt                                            >  2:3562447/1‑140 (MQ=255)

                                                                                            tgCGCCAACGCGCGAGGAACTACTCCTCGCACACAAAAACGTATAGATCGCTGCGACAGTGGCTAATGCTGTACTCAATAGGCCGTTGCTGTTGGTCAAGCGCCACTTGCTTGATCACCAGCACCGGTATTTTGCTATCt                                            <  2:849745/140‑1 (MQ=255)

                                                                                              cgcCAACGCGCGAGGAACTACTCCTCGCACACAAAAACGTATAGATCGCTGCGACAGTGGCTAATGCTGTACTCAATAGGCCGTTGCTGTTGGTCAAGCGCCACTTGCTTGATCACCAGCACCGGTATTTTGCTATCTaa                                          <  2:7595349/140‑1 (MQ=255)

                                                                                                ccAACGCGCGAGGAACTACTCCTCGCACACAAAAACGTATAGATCGCTGCGACAGTGGCTAATGCTGTACTCAATAGGCCGTTGCTGTTGGTCAAGCGCCCCTTGCTTGATCACCAGCACCGGGATGTTGCTCGCTAACt                                        >  1:9594574/1‑140 (MQ=255)

                                                                                                ccAACGCGCGAGGAACTACTCCTCGCACACAAAAACGTATAGATCGCTGCGACAGTGGCCAATGCTGTACTCAATAGGCCGTTGCTGTTGGTCAAGCGCCACTTGCTTGATCACCAGCACCGGTATTTTGCTATCTAACt                                        >  1:8730043/1‑140 (MQ=255)

                                                                                                   aCGCGCGAGGAACTACTCCTCGCACACAAAAACGTATAGATCGCTGCGACAGTGGCTAATGCTGTACTCAATAGGCCGTTGCTGTTGGTCAAGCGCCACTTGCTTGATCACCAGCACCGGTATTTTGCTATCTAACTGaa                                     >  1:1016076/1‑140 (MQ=255)

                                                                                                      cgcgAGGAACTACTCCTCGCACACAAAAACGTATAGCTCGCTGCGACAGTGGCTAATGCTGGACTCAATAGGCCGTTGCTGTTGGTCAAGCGCCACTTGCTTGATCACCAGCACCGGTATTTTTCTATCTAACTgcagag                                  <  2:1339752/140‑6 (MQ=255)

                                                                                                               ctACTCCTCGCACACAAAAACGTATAGATCGCTGCGACAGTGGCTAATGCTGTACTCAATAGGCCGTTGCTGTTGGTCAAGCGCCACTTGCTTGATCACCAGCACCGGTATTTTGCTATCTAACTGAATATGTGACTGaa                         >  2:835869/2‑140 (MQ=255)

                                                                                                                  ctcctcGCACACAAAAACGTATAGATCGCTGCGACAGTGGCTAATg                                                                                                                    <  2:3761015/46‑1 (MQ=255)

                                                                                                                     ctcGCACACAAAAACGTATAGATCGCTGCGACAGTGGCTAATGCTGTACTCAATAGGCCGTTGCTGTTGGTCAAGCGCCACTTGCTTGATCACCAGCACCGGTATTTAGCTATCTAACGGAATATGTGACTGAAACTcgg                   >  2:4907260/1‑140 (MQ=255)

                                                                                                                       cGCACACAAAAACGTATAGATCGCTGCGACAGTGGCTAATGCTGTACTCAATAGGCCGTTGCTGTTGGTCAAGCGCCACTTGCTTGATCACCAGCACCGGTATTTTGCTATCTAACTGAATATGTGACTGAAACTcggca                 >  2:6116623/1‑140 (MQ=255)

                                                                                                                       cGCACACAAAAACGTATAGATCGCTGCGACAGTGGCTAATGCTGTACTCAATAGGCCGTTGCTGTTGGTCAAGCGCCACTTGCTTGATCACCAGCACCGGTATTTTGCTATCTAACTGAATATGTGACTGAAACTcggca                 >  2:1064341/1‑140 (MQ=255)

                                                                                                                       cGCACACAAAAACGTATAGATCGCTGCGACAGTGGCTAATGCTGTACTCAATAGGCCGTTGCTGTTGGTCAAGCGCCACTTGCTTGATCACCAGCACCGGTATTTTGCTATCTAACTGAATATGTGACTGAAACTcggca                 >  1:3084529/1‑140 (MQ=255)

                                                                                                                       cGCACACAAAAACGTATAGATCGCTGCGACAGTGGCTAATGCTGTACTCAATAGGCCGTTGCTGTTGGTCAAGCGCCACTTGCTTGATCACCAGCACCGGTATTTTGCTATCTAACTGAATATGTGACTGAAACTcggca                 >  1:2074921/1‑140 (MQ=255)

                                                                                                                       cGCACACAAAAACGTATAGATCGCTGCGACAGTGGCTAATGCTGTACTCAATAGGCCGTTGCTGTTGGTCAAGCGCCACTTGCTTGATCACCAGCACCGGTATTTTGCTATCTAACTGAATATGTGACTGAAACTcggca                 >  1:10662291/1‑140 (MQ=255)

                                                                                                                       cGCACACAAAAACGTATAGATCGCTGCGACAGTGGCTAAGGCTGTACTCAATAGGCCGTTGCTGTTGGTCAAGCGCCACTTGCTTGATCACCAGCACCGGTATTTGGCTATCTCCCTGAATATGTGACTGAAACTcggca                 >  2:8729687/1‑140 (MQ=255)

                                                                                                                       cGCACACAAAAACGTATAGATAGCTGCGACAGTGGCTAATGCTGTACTCAATAGGCCGTTGCTGTTGGTCAAGCGCCACATGCGTGATCACCAGCACCGGTATTTTGCTATCGAACTGAATATGTGACTGAAACTcggaa                 >  2:7390093/1‑138 (MQ=255)

                                                                                                                         cacacaAAAACGTATAGATCGCTGCGACAGTGGCTAATGCTGTACTCAATAGGCCGTTGCTGTTGGTCAAGCGCCACTTGCTTGATCACCAGCACCGGTATTTTGCTATCTAACTGAATATGTGACTGAAACTcggcatc               >  2:9604050/1‑140 (MQ=255)

                                                                                                                               aaaaCGTATAGATCGCTGCGACAGTGGCTCATGCTGTACTCAATAGGCCGGTGCTGTTGGTCAAGCGCCACTTGCTTGATCACCAGCACCGGTCTTTTGCTCTCTAACTGAATATGTGACTGTAACTcggcatccggcat         >  2:10926179/1‑140 (MQ=255)

                                                                                                                               aaaaCGTATAGATCGCTGCGACAGTGGCTAATGCTGTACTCAATAGGCCGTTGCTGTTGGTCAAGCGCCACTTGCTTGATCACCAGCACCGGTATTTTGCTATCTAACTGAATATGTGACTGAAACTcggcatccggcat         <  2:4117823/140‑1 (MQ=255)

GCCGGGCTGGCCTCTGGTCTGCCACTGGCGGATGCCGTATTACTGGGCAATGCAGTGGCGTCGTGGGTTGTCGGGCATCGGGGCGGTGATTGTGCGCCAACGCGCGAGGAATTACTCCTCGCACACAAAAACGTATAAATCGCTGCGACAGTGGCTAATGCTGTACTCAATAGGCCGTTGCTGTTGGTCAAGCGCCACTTGCTTGATCACCAGCACCGGTATTTTGCTATCTAACTGAATATGTGACTGAAACTCGGCATCCGGCATCCGGGCG  >  NZ_CP025268/2185961‑2186234

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`