| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 2,321,062 | T→C | *950* (TAA→TAG) | rcsC ← | two‑component system sensor histidine kinase RcsC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 2,321,062 | 0 | T | C | 99.7% | 1971.3 / NA | 567 | *950* (TAA→TAG) | rcsC | two‑component system sensor histidine kinase RcsC |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (282/282); minor base G (1/1); total (284/283) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 567 total aligned reads displayed.
GCGGCGTAAACGCCTTATCCGGCCTACGATTCCCATTATTTCAACAAATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCTTACGAATCCCGCGATTTCCTGA‑CCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATCCAGCGTTACCGGCTTCGACAGGCAGCTGTCCATACCGGACTCCAGACACCGCTGCTTCTCTTCAGCCAACGCAT > NZ_CP025268/2320925‑2321198 | gcggcgTAAACGCCTTATCCGGCCTACGATTCCCATTATTTCAACAAATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTa > 2:1879746/1‑140 (MQ=255) cgTAAACGCCTTATCCGGCCTACGATTCCCATTATTTCAACAAATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGaa > 1:3123833/1‑140 (MQ=255) gCCTTATCCGGCCTACGATTCCCATTATTTCAACAAATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCcgcg < 1:2501422/140‑1 (MQ=255) ccTTATCCGGCCTACGATTCCCATTATTTCAACAAATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGa < 1:1070596/140‑1 (MQ=255) cTTATCCGGCCTACGATTCCCATTATTTCAACAAATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGAt > 1:10957938/1‑140 (MQ=255) ttATCCGGCCTACGATTCCCATTATTTCAACAAATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGAtt > 1:9121980/1‑140 (MQ=255) aTCCGGCCTACGATTCCCATTATTTCATCAAATTACATTATAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTc > 2:8756136/1‑140 (MQ=255) aTCCGGCCTACGATTCCCATTATTTCAACAAATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTc > 2:1639678/1‑140 (MQ=255) cGGCCTACGATTCCCATTATTTCAACAAAGTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTg < 1:3597961/140‑1 (MQ=255) ggCCTACGATTCCCATTATTTCAACAAATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCNCGCGATTTCCTGa < 1:9712150/140‑1 (MQ=255) gcatACGATTCCCATTATTTCAACAAATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTTCTCTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGA‑c > 2:7780999/4‑140 (MQ=255) gCCTACGATTCCCATTATTTCAACAAATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGA‑c > 1:10441124/1‑140 (MQ=255) gCCTACGAGTCCCATTATTTCACCAAATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCAATTGCACTGCATGCCGGATGCGGCGTAAACGCCTTTTCCGTCCTACGAATCCCGCGATTTCCTGA‑c < 1:43966/140‑1 (MQ=37) ccTACGATTCCCATTATTTCAACAAATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGA‑cc > 1:9458644/1‑140 (MQ=255) aCGATTCCCATTATTTCAACAAATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGA‑CCctc < 1:1124365/140‑1 (MQ=255) cGATTCCCATTATTTCAACAAATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGA‑CCctct > 1:606815/1‑140 (MQ=255) cGATTCCCATTATTTCAACAAATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGA‑CCctct < 1:168975/140‑1 (MQ=255) cGATTCCCATTATTTCAACAAATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGA‑CCctct > 2:6066991/1‑140 (MQ=255) cGATTCCCATTATTTCAACAAATTACATTAAAGTAGGCCAGAGAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGA‑CCctct < 2:2178255/140‑1 (MQ=255) gATTCCCATTATTTCAACAAATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGA‑CCCtctc < 1:7446122/140‑1 (MQ=255) gATTCCCATTATTTCAACAAATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGA‑CCCtctc < 2:3441694/140‑1 (MQ=255) cccATTATTTCAACAAATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGA‑CCCTCTCGGCa < 2:7203884/140‑1 (MQ=255) ccATTATTTCAACAAATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGA‑CCCTCTCGGCat > 1:3431164/1‑140 (MQ=255) ccATTATTTCAACAAATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGA‑CCCTCTCGGCat > 1:7884511/1‑140 (MQ=255) cATTATTTCAACAAATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGA‑CCCTCTCGGCata < 2:2600850/140‑1 (MQ=255) attattTCAACAAATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGA‑CCCTCTCGGCatat < 1:5682885/140‑1 (MQ=255) tgattTCAACAAATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGA‑CCCTCTCGGCAtata < 2:5601709/138‑1 (MQ=255) tattTCAACAAATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGA‑CCCTCTCGGCATATaa > 2:2405761/1‑140 (MQ=255) acaaATTACATTAAAGTAGGCCAGATAATACGCGTCAGCGTCTCATCTGGCATTTGCACAGTATGCAGTATGAGGCGTAAACGCATAATCCGTCCTACGAATCCCGCGATTTCCTGA‑CCCTCTCGGCATATAAGGTCCGc > 2:9089948/1‑140 (MQ=255) acaaATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGATTGCCGGATGCGGCGTAAACGCCTGATCCGTCCTACGAATCCCGCGATTTCCTGA‑CACTCTCGGCCTCTAACGGCAGc > 2:5995296/1‑140 (MQ=25) acaaATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGA‑CCCTCTCGGCATATAACGTCAGc > 1:6402182/1‑140 (MQ=255) caaATTACCTTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGA‑CCCTCTCGGCAGATAACGTCAGCg > 2:9497811/1‑140 (MQ=255) caaATTACATTAATGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGA‑CCCTCTCGGCATATAACGTCAGCg < 2:11114201/140‑1 (MQ=255) aaaTTACATTACAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGA‑CCCTCTCGGCATATAACGTCAGCGt < 2:9644648/140‑1 (MQ=255) aaaTTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGA‑CCCTCTCGGCATATAACGTCAGCGt < 2:4745353/140‑1 (MQ=255) aaaTTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGA‑CCCTCTCGGCATATAACGTCAGCGt < 2:1452137/140‑1 (MQ=255) aaaTTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGA‑CCCTCTCGGCATATAACGTCAGCGt < 2:3748538/140‑1 (MQ=255) aCATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGA‑CCCTCTCGGCATATAACGTCAGCGTCTGtt < 2:6982494/140‑1 (MQ=255) aCATTAAAGAAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCAATTGCCCTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGA‑CCCTCTCGGCATATAACGTCAGCGTCTGtt < 1:4921753/140‑1 (MQ=255) aTTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGA‑CCCTCTCGGCATATAACGTCAGCGTCTGtttt > 1:4330457/1‑140 (MQ=255) tAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGA‑CCCTCTCGGCATATAACGTCAGCGTCTGTTTTAt < 2:6899759/140‑1 (MQ=255) tAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTGGCACTGAATGCCGGAGGCGGCGTAAACGCCTTAGCCGTCCTACGAATCCCGCGATTTCCTGA‑CCCTCTCGGCATATAACGTCAGCGTCTGtttgag > 2:6248438/1‑137 (MQ=37) aaGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGA‑CCCTCTCGGCATATAACGTCAGCGTCTGTTTTATca < 1:538/140‑1 (MQ=255) gTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGA‑CCCTCTCGGCATATAACGTCAGCGTCTGTTTTATcaca < 2:52338/140‑1 (MQ=255) tAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGA‑CCCTCTCGGCATATAACGTCAGCGTCTGTGTTATCACAt > 2:2956451/1‑140 (MQ=255) ggCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGA‑CCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATcc > 1:7584099/1‑140 (MQ=255) gCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGA‑CCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATCCa > 2:1979390/1‑140 (MQ=255) gCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGA‑CCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATCCa > 1:3248945/1‑140 (MQ=255) gATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGA‑CCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATCCAGCGt > 2:3269239/1‑140 (MQ=255) gATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGA‑CCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATCCAGCGt > 1:7947984/1‑140 (MQ=255) aTAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGA‑CCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATCCAGCGtt > 2:1019468/1‑140 (MQ=255) tAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGA‑CCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATCCAGCGTTa < 1:2054690/140‑1 (MQ=255) gACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGCTTTCCTGA‑CCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATCCAGCGTTACCg < 1:2907238/140‑1 (MQ=255) gACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGA‑CCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATCCAGCGTTACCg < 1:4598894/140‑1 (MQ=255) aCGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGA‑CCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATCCAGCGTTACCgg > 2:6754105/1‑140 (MQ=255) cgTCAGCGTCGCATCTGGCATTTGCACTGACTGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGA‑CCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATCCAGCGTTACCGGCtt < 1:2623351/140‑1 (MQ=255) gTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGA‑CCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATCCAGCGTTACCGGCTTc > 2:2692605/1‑140 (MQ=255) gTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGA‑CCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATCCAGCGTTACCGGCTTc > 1:3986008/1‑140 (MQ=255) tCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGA‑CCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATCCAGCGTTACCGGCTTCg > 1:10285701/1‑140 (MQ=255) tCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGA‑CCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATCCAGCGTTACCGGCTTCg > 1:2281912/1‑140 (MQ=255) aGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGA‑CCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATCCAGCGTTACCGGCTTCGAc < 1:1284481/140‑1 (MQ=255) cGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGA‑CCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATCCAGCGTTACCGGCTTCGACAg > 1:10009594/1‑140 (MQ=255) cGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGA‑CCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATCCAGCGTTACCGGCTTCGACAg > 1:10167549/1‑140 (MQ=255) gTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGA‑CCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATCCAGCGTTACCGGCTTCGACAgg < 1:6214927/140‑1 (MQ=255) cGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGA‑CCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATCCAGCGTTACCGGCTTCGACAGGCa < 1:2404140/140‑1 (MQ=255) gCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGA‑CCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATCCAGCGTTACCGGCTTCGACAGGCAg < 2:3151889/140‑1 (MQ=255) gCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGA‑CCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATCCAGCGTTACCGGCTTCGACAGGCAg < 2:10510781/140‑1 (MQ=255) gCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGA‑CCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATCCAGCGTTACCGGCTTCGACAGGCAg < 1:6554967/140‑1 (MQ=255) cctCTGGCATGTGCCCTGAATGCCGGAGGCGGCGTAAACGCCTTCTCCGTCCTCCGCATCCCGCGATTGCCTGT‑CCCTCTCGGCCTCGACCGTCAGCGGCTGTTTTCTCACCTCCAGCGTTACCGGCTTCGACAGGCAGc > 2:8320854/3‑140 (MQ=255) tGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGA‑CCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATCCAGCGTTACCGGCTTCGACAGGCAGCTGTc < 2:10322792/140‑1 (MQ=255) ttGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGA‑CCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATCCAGCGTTACCGGCTTCGACAGGCAGCTGTCCATAcc < 1:5197650/140‑1 (MQ=255) ttGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGA‑CCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATCCAGCGTTACCGGCTTCGACAGGCAGCTGTCCATAcc > 2:8527354/1‑140 (MQ=255) gCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGA‑CCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATCCAGCGTTACCGGCTTCGACAGGCAGCTGTCCATACCgg < 1:6883769/140‑1 (MQ=255) gCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGA‑CCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATCCAGCGTTACCGGCTTCGACAGGCAGCTGTCCATACCgg < 1:8601088/140‑1 (MQ=255) gCACTGAATGCCGGATGCGGCGTAAAAGCCTTATCCTTCCTACGAATCCCGCGATTTCCTGA‑CCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATCCAGCGTTACCGGCTTCGACAGGCAGCTGTCCATCCCgg < 1:952051/140‑1 (MQ=255) cACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGACCCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATCCAGCGTTACCGGCTTCGACAGGCAGCTGTCCATACCgg < 1:4243014/140‑1 (MQ=255) cACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGA‑CCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATCCAGCGTTACCGGCTTCGACAGGCAGCTGTCCATACCGGa > 1:5554371/1‑140 (MQ=255) cACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGA‑CCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATCCAGCGTTACCGGCTTCGACAGGCAGCTGTCCATACCGGa < 1:6650289/140‑1 (MQ=255) aaTGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGA‑CCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATCCAGCGTTACCGGCTTCGACAGGCAGCTGTCCATACCGGACTCCa < 2:1274424/140‑1 (MQ=255) tGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGA‑CCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATCCAGCGTTACCGGCTTCGACAGGCAGCTGTCCATACCGGACTCCAGa < 2:5889631/140‑1 (MQ=255) tGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGA‑CCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATCCAGCGTTACCGGCTTCGACAGGCAGCTGTCCATACCGGACTCCAGa < 1:7187845/140‑1 (MQ=255) cGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGA‑CCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATCCAGCGTTACCGGCTTCGACAGGCAGCTGTCCATACCGGACTCCAGacac > 1:1861161/1‑140 (MQ=255) cGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGA‑CCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATCCAGCGTTACCGGCTTCGACAGGCAGCTGTCCATACCGGACTCCAGacac < 1:8895068/140‑1 (MQ=255) cGGATGCGGCGTAAACGACTTATCCGTCCTACGAATCCCGCGATTTCCTGA‑CCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATCCAGCGTTACCGGCTTCGACAGGCAGCTGTCCATACCGGACTCCAGacac < 1:9786679/140‑1 (MQ=255) ggATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGA‑CCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATCCAGCGTTACCGGCTTCGACAGGCAGCTGTCCATACCGGACTCCAGACAcc < 1:8344506/140‑1 (MQ=255) aTGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGA‑CCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATCCAGCGTTACCGGCTTCGACAGGCAGCTGTCCATACCGGACTCCAGACACCgc < 2:4453321/140‑1 (MQ=255) aTGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGA‑CCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATCCAGCGTTACCGGCTTCGACAGGCAGCTGTCCATACCGGACTCCAGACACCgc < 1:11160333/140‑1 (MQ=255) aTGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGA‑CCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATCCAGCGTTACCGGCTTCGACAGGCAGCTGTCCATACCGGACTCCAGACACCgc > 2:6542604/1‑140 (MQ=255) aTGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGA‑CCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATCCAGCGTTACCGGCTTCGACAGGCAGCTGTCCATACCGGACTCCAGACACCgc < 2:137650/140‑1 (MQ=255) ggcgTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGA‑CCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATCCAGCGTTACCGGCTTCGACAGGCAGCTGTCCATACCGGACTCCAGACACCgctgct < 2:10749203/140‑1 (MQ=255) cgTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGA‑CCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATCCAGCGTTACCGGCTTCGACAGGCAGCTGTCCATACCGGACTCCAGACACCGCTGCTtc > 1:6044510/1‑140 (MQ=255) gCCTTATCCGTCCTACGAATCCCGCGATTTCCAGA‑CCCTCTCGGCATATAACGTCAGCGTCTGTTTAATCACATCCAGCGTTACCGGCTTCGACAGGCAGCTGTACAAACCGGACTCAAGACACAGCTGCTTCTCTTAAg > 2:9436036/1‑140 (MQ=255) ccTTATCCGTCCTACGAATCCCGCGATTTCCTGA‑CCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATCCAGCGTTACCGGCTTCGACAGGCAGCTGTCCATACCGGACTCCAGACACCGCTGCTTCTCTTCAGc < 1:9226972/140‑1 (MQ=255) cTTATCCGTCCTACGAATCCCGCGATTTCCTGA‑CCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATCCAGCGTTACCGGCTTCGACAGGCAGCTGTCCATACCGGACTCCAGACACCGCTGCTTCTCTTCAGcc > 2:115976/1‑140 (MQ=255) cTTAGCCGTCCTACGAATCCCGCGATTTCCTGA‑CCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATCCAGCGTTACCGGCTTCGACAGGCAGCTGTCCCTACCGGACTCCAGACACCGCGGCTTCTCTTCAGcc < 1:2758697/140‑1 (MQ=255) tATCCGTCCTACGAATCCCGCGATTTCCTGA‑CCCTCTCTGCAGATAACGTCAGCCTCTGTTTTATCACATCCAGCGTTACCGGCTACGACAGGCAGCGGTCCATACCCGACTCCAGACCCCGCTGCTTCTCTTCAGCCaa < 2:8034422/140‑1 (MQ=255) tATCCGTCCTACGAATCCCGCGATTTCCTGA‑CCCTCTCGGCATATCACGTCAGCGTCTGTTTTATCACATCCAGCGTTACCGGCTTCGACAGGCAGCTGTCCATACCGGACTCCAGACACCGCTGCTTCTCTTCAGCCaa < 2:9699724/140‑1 (MQ=255) tATCCGTCCTACGAATCCCGCGATTTCCTGA‑CCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATCCAGCGTTACCGGCTTCGACAGGCAGCTGTCCATACCGGACTCCAGACACCGCTGCTTCTCTTCAGCCaa < 2:4168122/140‑1 (MQ=255) aTCCGTCCTACGAATCCCGCGATTTCCTGA‑CCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATCCAGCGTTACCGGCTTCGACAGGCAGCTGTCCATACCGGACTCCAGACACCGCTGCTTCTCTTCAGCCAAc > 2:3580170/1‑140 (MQ=255) aTCCGTCCTACGAATCCCGCGATTTCCTGA‑CCCTCTCGGCATATAACGTCAGCGTCTGTTTTAACACATCCAGCGTTACCGGCTTCGACAGGCAGCAGTCCATACCGGACTCCAGACACCGCTGCTTCTCTTCAGCCAAc > 2:7443727/1‑140 (MQ=255) | GCGGCGTAAACGCCTTATCCGGCCTACGATTCCCATTATTTCAACAAATTACATTAAAGTAGGCCAGATAAGACGCGTCAGCGTCGCATCTGGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCTTACGAATCCCGCGATTTCCTGA‑CCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATCCAGCGTTACCGGCTTCGACAGGCAGCTGTCCATACCGGACTCCAGACACCGCTGCTTCTCTTCAGCCAACGCAT > NZ_CP025268/2320925‑2321198 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |