Predicted mutation
evidence seq id position mutation annotation gene description
RA NZ_CP025268 2,385,598 C→T intergenic (‑20/‑45) elaA ← / → rbn GNAT family N‑acetyltransferase/ribonuclease BN

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NZ_CP0252682,385,5980CT99.8% 2321.6 / NA 606intergenic (‑20/‑45)elaA/rbnGNAT family N‑acetyltransferase/ribonuclease BN
Reads supporting (aligned to +/- strand):  ref base C (0/0);  major base T (378/226);  minor base A (0/1);  total (378/228)
Fisher's exact test for biased strand distribution p-value = 3.75e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 608 total aligned reads displayed.

ATATCCTGATAAGGGCAATTCTGCTCGACAACAAACACCGCGCAACGCAGTTGTAATAAGGCATAAAGCTGGGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGCATGCCTTATACTAGCCGGAATATTTTTTGAAACGTGATGAACTCATGGAATTAATTTTTTTAGGTACTTCAGCCGGTGTGCCAACCCGCACGCGCAATGTCACGGCAATATTGCTTAACCTGCAACATCCGACCC  >  NZ_CP025268/2385463‑2385733
                                                                                                                                       |                                                                                                                                       
 tatCCTGATAAGGGCAATTCTGCTCGACAACAAACACCGCGCAACGCAGTTGTAATAAGGCATAACGCTGGGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGcc                                                                                                                                    <  1:4879451/140‑1 (MQ=255)
 tagccagATAAGGGCACTTCTGCTCGACACCAAACACCGCGCAACGCAGTTGTACTACGGCCTAAACCTGGGAAACCGATAATTCAGAGTGAGGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGcc                                                                                                                                    <  2:7585210/134‑1 (MQ=255)
    ccTGATAAGGGCAATTCTGCTCGACAACAAACACCGCGCAACGCAGTTGTAATAAGGCATAAAGCTGGGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTta                                                                                                                                 >  2:2397116/1‑140 (MQ=255)
        aTAAGGGCAATTCTGCTCGACAACAAACACCGCGCAACGCAGTTGTAATAAGGCATAAAGCTGGGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACt                                                                                                                             >  2:3159991/1‑140 (MQ=255)
        aTAAGGGCAATTCTGCTCGACAACAAACACCGCGCAACGCAGTTGTAATAAGGCATAAAGCTGGGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACt                                                                                                                             >  1:10846473/1‑140 (MQ=255)
        aTAAGGGCAATTCTGCTCGACAACAAACACCGCGCAACGCAGTTGTAATAAGGCATAAAGCTGGGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACt                                                                                                                             >  2:5305702/1‑140 (MQ=255)
        aTAAGGGCAATTCTGCTCGACAACAAACACCGCGCAACGCAGTTGTAATAAGGCATAAAGCTGGGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACt                                                                                                                             >  1:3474143/1‑140 (MQ=255)
        aTAAGGGCAATTCTGCTCGACAACAAACACCGCGCAACGCAGTTGTAATAAGGCATAAAGCTGGGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACt                                                                                                                             <  1:2222808/140‑1 (MQ=255)
           aGGGCAATTCTGCTCGACAACAAACACCGCGCAACGCAGTTGTACTAACGCATAAAGCTGGGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAAAGCTCTCCTTTTAGATGTATGCCTTATACTAGc                                                                                                                          <  1:5128570/140‑1 (MQ=255)
           aGGGCAATTCTGCTCGACAACAAACACCGCGCAACGCAGTTGTAATAAGGCATAAAGCTGGGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGc                                                                                                                          >  2:1605558/1‑140 (MQ=255)
           aGGGCAATTCTGCTCGACAACAAACACCGCGCAACGCAGTTGTAATAAGGCATAAAGCTGGGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGc                                                                                                                          <  1:7427979/140‑1 (MQ=255)
             ggCAATTCTGCTCGACAACAAACACCGCGCAACGCAGTTGTAATAAGGCATAAAGCTGGGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTCGCCg                                                                                                                        >  2:5538449/1‑140 (MQ=255)
             ggCAATTCTGCTCGACAACAAACACCGCGCAACGCAGTTGTAATAAGGCATAAAGCTGGGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCg                                                                                                                        >  1:6204370/1‑140 (MQ=255)
             ggCAATTCTGCTCGACAACAAACACCGCGCAACGCAGTTGTAATAAGGCATAAAGCTGGGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCg                                                                                                                        >  1:1332891/1‑140 (MQ=255)
               cAATTCTGCTCGACAACAAACACCGCGCAACGCAGTTGTAATAAGGCATAAAGCTGGGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGa                                                                                                                      >  1:7297985/1‑140 (MQ=255)
               cAATTCTGCTCGACAACAAACACCGCGCAACGCAGTTGTAATAAGGCATAAAGCTGGGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGa                                                                                                                      >  1:100539/1‑140 (MQ=255)
               cAATTCTGCTCGACAACAAACACCGCGCAACGCAGTTGTAATAAGGCATAAAGCTGGGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGa                                                                                                                      >  2:944283/1‑140 (MQ=255)
                  ttCTGCTCGACAACAAACACCGCGCAACGCAGTTGTAATAAGGCATAAAGCTGGGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAata                                                                                                                   >  2:5923873/1‑140 (MQ=255)
                  ttCTGCTCGACAACAAACACCGCGCAACGCAGGTGTAATCAGGCATAAAGCTGGGACACCGATACTTCAGAGTGATGCAGAGCTTGCCAGTCAATCATATTGCTCTCCTGTTAGATGTATGCGTTATAGTAGCCGGTatc                                                                                                                   >  2:7779067/1‑139 (MQ=255)
                       cTCGACAACAAACACCGCGCAACGCAGTTGTAATAAGGCATAAAGCTGGGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTCGCCGGAATAttttt                                                                                                              >  2:478572/1‑140 (MQ=255)
                       cTCGACAACAAACACCGCGCAACGCAGTTGTAATAAGGCATAAAGCTGGGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATAttttt                                                                                                              >  1:8799937/1‑140 (MQ=255)
                           acaacaAACACCGCGCAACGCAGTTGTAATAAGGCATAAAGCTGGGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGaa                                                                                                          <  1:3630543/140‑1 (MQ=255)
                           acaacaAACACCGCGCAACGCAGTTGTAATAAGGCATAAAGCTGGGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGaa                                                                                                          <  1:785856/140‑1 (MQ=255)
                                   cacCGCGCAACGCAGTTGTAATAAGGCATAAAGCTGGGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGAAACGtgatg                                                                                                  <  2:3028911/140‑1 (MQ=255)
                                   cacCGCGCAACGCAGTTGTAATAAGGCATAAAGCTGGGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGAAACGtgatg                                                                                                  <  1:1221250/140‑1 (MQ=255)
                                      cgcgCAACGCAGTTGTAATAAGGCATAAAGCTGGGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGAAACGTGATGTAc                                                                                               >  1:7638981/1‑140 (MQ=255)
                                      cgcgCAACGCAGTTGTAATAAGGCATAAAGCTGGGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGAAACGTGATGAAc                                                                                               >  1:4262496/1‑140 (MQ=255)
                                      cgcgCAACGCAGTTGTAATAAGGCATAAAGCTGGGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGAAACGTGATGAAc                                                                                               >  1:1982757/1‑140 (MQ=255)
                                      cgcgCAACGCAGTTGTAATAAGGCATAAAGCTGGGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGAAACGTGATGAAc                                                                                               >  2:7298274/1‑140 (MQ=255)
                                         gcAACGCAGTTGTAATACGGCATAAAGCTGTGACACCGATAATTCAGCGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATAGTTGTTGAAACGTGATGAACTcc                                                                                            >  2:2759101/1‑139 (MQ=255)
                                          cAACGCAGTTGTAATATGGCATAATGCTGGGATACAGATAATTCAGAGTGATGCATATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGGATGCAGTATACTAGCCGGAATATTTTTTGAAACGTGATGAACTCAt                                                                                           <  2:214700/140‑1 (MQ=255)
                                                  ttGTAATAAGGCATAAAGCTGGGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGAAACGTGATGAACTCATGGacttaa                                                                                   >  1:9744879/1‑140 (MQ=255)
                                                    gTAATAAGGCATAAAGCTGGGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGAAACGTGATGAACTCATGGaattaatt                                                                                 >  1:6375724/1‑140 (MQ=255)
                                                       ataaGGCATAAAGCTGGGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGACTATTTTTTGAAACGTGATGAACTCATGGAATTAAttttt                                                                              >  2:3531483/1‑140 (MQ=255)
                                                       ataaGGCATAAAGCTGGGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGAAACGTGATGAACTCATGGAATTAAttttt                                                                              >  1:10357912/1‑140 (MQ=255)
                                                           ggCATAAAGCTGGGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGAAACGTGATGAACTCATGGAATTAATTTTTTTAg                                                                          >  2:741857/1‑140 (MQ=255)
                                                           cgCATAAAGCTGGGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGAAACGTGATGAACTCATGGAATTAATTTTTTTAg                                                                          <  2:10758910/139‑1 (MQ=255)
                                                            gCATAAAGCTGGGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGAAACGTGATGAACTCATGGAATTAATTTTTTTAgg                                                                         >  1:3815589/1‑140 (MQ=255)
                                                            gCATAAAGCTGGGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGAAACGTGATGAACTCATGGAATTAATTTTTTTAgg                                                                         >  1:2968088/1‑140 (MQ=255)
                                                            gCATAAAGCTGGGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGAAACGTGATGAACTCATGGAATTAATTTTTTTAgg                                                                         >  1:2787340/1‑140 (MQ=255)
                                                            gCATAAAGCTGGGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGAAACGTGATGAACTCATGGAATTAATTTTTTTAgg                                                                         <  2:6381108/140‑1 (MQ=255)
                                                            gCATAAAGCTGGGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGAAACGTGATGAACTCATGGAATTAATTTTTTTAgg                                                                         >  2:673021/1‑140 (MQ=255)
                                                            gCAAAAAGCTGGGAAACAGATAATTCAGAGTGTTGCAGATCTTGCCATTCAATCATAATGCTATCGTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGAATCGTGATGATCTCAGGGACTGTTTTTTTTTAgg                                                                         >  2:10513873/1‑140 (MQ=255)
                                                             cATACAGCTGGGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGAAACGTGATGAACTCATGGAATTAATTTTTTTAGGt                                                                        <  1:11211667/140‑1 (MQ=255)
                                                             cATAAAGCTGGGAAACCGATTATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGAAACGTGATGAACTCATGGAATTAATTTTTTTAGGt                                                                        <  2:9812895/140‑1 (MQ=255)
                                                             cATAAAGCTGGGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGAAACGTGATGAACTCATGGAATTAATTTTTTTAGGt                                                                        <  1:2634439/140‑1 (MQ=255)
                                                               tAAAGCTGGGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGAAACGTGATGAACTCATGGAATTAATTTTTTTAGGTAc                                                                      >  1:9376733/1‑140 (MQ=255)
                                                                     tGGGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAAGGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGAAACGTGATGAACTCATGGAATTAATTTTTTTAGGTACTTCAGc                                                                <  1:10684751/140‑1 (MQ=255)
                                                                      gggAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTGGCCGGAATATTTTTTGAAACGTGATGAACTCATGGAATTAATTTTTTTAGGTACTTCAGcc                                                               >  1:7048241/1‑140 (MQ=255)
                                                                      gggAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGAAACGTGATGAACTCATGGAATTAATTTTTTTAGGTACTTCAGcc                                                               >  1:2456350/1‑140 (MQ=255)
                                                                      gggAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGAAACGTGATGAACTCATGGAATTAATTTTTTTAGGTACTTCAGcc                                                               >  1:6591171/1‑140 (MQ=255)
                                                                       ggACACCGAGAAGTCAGAGTGCAGCAGATCTTGCCACTCAATCAGAATGCTCTCCTTTTAGATGTATGCCTGATACTAGCCGGAATATTTTTTGAAACGTGATGAACTCATGGAATTAATTTATTTAGGTACTTCAGCCg                                                              <  2:5460790/140‑1 (MQ=255)
                                                                       ggAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGAAACGTGATGAACTCATGGAATTAATTTTTTTAGGTACTTCAGCCg                                                              <  1:9974878/140‑1 (MQ=255)
                                                                       ggAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGAAACGTGATGAACTCATGGAATTAATTTTTTTAGGTACTTCAGCCg                                                              <  1:10976001/140‑1 (MQ=255)
                                                                       ggAAACCGATAATTCAGAGTGATGCAGATCGTGCCATTCATTCATAATGCTCTCCTTTTTGATGTATGCCTTATACTAGCCGGACTATTTTTTGAAACGTGATGATCTCATGGAATTAATAGTGTTAGGTACTTCAGCCg                                                              >  2:1810605/1‑140 (MQ=255)
                                                                           aCCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGAAACGTGATGAACTCATGGAATTAATTTTTTTAGGTACTTCAGCCGgtgt                                                          <  2:5782152/140‑1 (MQ=255)
                                                                                    tCAGAGTGATGCAGCTCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACGAGCCGGAATATTTTTTGAAACGTGATGAACTCATGGAATTAATTTTTTTAGGTACTTCAGCCGGTGTGCCAACCCg                                                 <  2:8443863/140‑1 (MQ=255)
                                                                                      agagTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGAAACGTGATGAACTCATGGAATTAATTTTTTTAGGTACTTCAGCCGGTGTGCCAACCCGCa                                               <  2:2552455/140‑1 (MQ=255)
                                                                                       gagTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGAAACGTGATGACCTCATGGAATTAATTTTTTTAGGTACTTCAGCCGGTGTGCCAACCCGCAc                                              >  2:11181977/1‑140 (MQ=255)
                                                                                        agTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGAAACGTGATGAACTCATGGAATTAATTTTTTTAGGTACTTCAGCCGGTGTGCCAACCCGCAcg                                             >  1:7999433/1‑140 (MQ=255)
                                                                                            aTGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGAAACGTGATGAACTCATGGAATTAATTTTTTTAGGTACTTCAGCCGGTGTGCCAACCCGCACGCGCa                                         <  2:8859806/140‑1 (MQ=255)
                                                                                             tGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGACGGAATATTTTTTGAAACGTGATGAACTCATGGAATTAATTTTTTTAGGTACTTCAGCCGGTGTGCCAACCCGCACGCGCaa                                        >  2:3987252/1‑140 (MQ=255)
                                                                                              gCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGAAACGTGATGAACTCATGGAATTAATTTTTTTAGGTACTTCAGCCGGTGTGCCAACCCGCACGCGCAAt                                       <  1:6061674/140‑1 (MQ=255)
                                                                                                agctcgtGCCATACAATCATACTGCTCTCCACTTATATGTCTGCCTTATACTAGCCGGAATATATTTTGAAACGTGATGAACTCATGGACTAAATTTTTTTAGGTACTTCAGCCGGTGTGCCAACCCGCACGCGCAATGt                                     <  2:10993582/134‑1 (MQ=255)
                                                                                                  aTCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGAAACGTGATGAACTCATGGAATTAATTTTTTTAGGTACTTCAGCCGGTGTGCCAACCCGCACGCGCAATGTCa                                   <  2:7045241/140‑1 (MQ=255)
                                                                                                  aTCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGAAACGTGATGAACTCATGGAATTAATTTTTTTAGGTACTTCAGCCGGTGTGCCAACCCGCACGCGCAATGTCa                                   <  2:10275537/140‑1 (MQ=255)
                                                                                                  aTCGTGCCACTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGAAACGTGATGAACTCATGGAATTAATTTTTTTAGGTACTTCAGCCGGTGTGCCAACCCGCACGCGCAATGTCa                                   <  1:5223046/140‑1 (MQ=255)
                                                                                                      tGCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGAAACGTGATGAACTCATGGAATTAATTTTTTTAGGTACTTCAGCCGGTGTGCCAACCCGCACGCGCAATGTCACGGc                               >  1:5574029/1‑140 (MQ=255)
                                                                                                       gCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGAAACGTGATTCACTCATGGAATTAATTTTTTTAGGTACTTCAGACGGTGTGCCAACCCGCACGCGCAATGTCACGGCa                              >  2:4128288/1‑140 (MQ=255)
                                                                                                       gCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGAAACGTGATGAACTCATGGAATTAATTTTTTTAGGTCCTTCAGCCGGTGTGCCAACCCGCACGCGCAATGTCACGGCa                              >  1:5406060/1‑140 (MQ=255)
                                                                                                       gCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGAAACGTGATGAACTCATGGAATTAATTTTTTTAGGTACTTCTGCCGGTGTGCCAACCCGCTCGCGCAATGTCACGGCa                              >  2:625325/1‑140 (MQ=255)
                                                                                                       gCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGAAACGTGATGAACTCATGGAATTAATTTTTTTAGGTACTTCAGCCGGTGTGCCAACCCGCACGCGCAATGTCACGGCa                              >  1:5790888/1‑140 (MQ=255)
                                                                                                       gCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGAAACGTGATGAACTCATGGAATTAATTTTTTTAGGTACTTCAGCCGGTGTGCCAACCCGCACGCGCAATGTCACGGCa                              >  2:1260638/1‑140 (MQ=255)
                                                                                                       gCCATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGAAACGTGATGAACTCATGGAATTAATTTTTTTAGGTACTTCAGCCGGTGTGCCAACCCGCACGCGCAATGTCACGGCa                              >  2:501359/1‑140 (MQ=255)
                                                                                                         cATTCACTCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGAAACGTGATGAACTCATGGAATTAATTTTTTTAGGTACTTCAGCCGGTGTGCCAACCCGCACGCGCAATGTCACGGCAat                            <  1:3233542/140‑1 (MQ=255)
                                                                                                         cATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGAAACGTGATGAACTCATGGAATTAATTTTTTTAGGTACTTCAGCCGGTGTGCCAACCCGCACGCGCAATGTCACGGCAat                            <  1:1763621/140‑1 (MQ=255)
                                                                                                         cATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGAAACGTGATGAACTCATGGAATTAATTTTTTTAGGTACTTCAGCCGGTGTGCCAACCCGCACGCGCAATGTCACGGCAat                            <  1:6899107/140‑1 (MQ=255)
                                                                                                         cATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGAAACGTGATGAACTCATGGAATTAATTTTTTTAGGTACTTCAGCCGGTGTGCCAACCCGCACGCGCAATGTCACGGCAat                            <  1:6698449/140‑1 (MQ=255)
                                                                                                         cATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGAAACGTGATGAACTCATGGAATTAATTTTTTTAGGTACTTCAGCCGGTGTGCCAACCCGCACGCGCAATGTCACGGCAat                            <  1:9185482/140‑1 (MQ=255)
                                                                                                         cATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGAAACGTGATGAACTCATGGAATTAATTTTTTTAGGTACTTCAGCCGGTGTGCCAACCCGCACGCGCAATGTCACGGCAat                            <  2:9212329/140‑1 (MQ=255)
                                                                                                         cATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGAAACGTGATGAACTCATGGAATTAATTTTTTTAGGTACTTCAGCCGGTGTGCCAACCCGCACGCGCAATGTCACGGCAat                            <  2:2062006/140‑1 (MQ=255)
                                                                                                         cATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGAAACGTGATGAACTCATGGAATTAATTTTTTTAGGTACTTCAGCCGGTGTGCCAACCCGCACGCGCAATGTCACGGCAat                            <  1:8296928/140‑1 (MQ=255)
                                                                                                         cATTCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATATATTTTGAAACGTGATGAACTCATGGAATTAATTTTTTTAGGTACTTCAGCCGGTGTGCCAACCCGCACGCGCAATGTCACGGCAat                            <  1:8175851/140‑1 (MQ=255)
                                                                                                            tcaatcaaAATGCTCACCTTTAAGATGTATGACTTATACTAGCCGGAATATTTATTGAAACGTGATGAACTCATGGAATAAATTATTGTACTTACTTCAGCCGTTGTGCAAACACTCACGCGAAATGTCACGGAAatagt                         >  2:506673/1‑138 (MQ=255)
                                                                                                            tCAATCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGAAACGTGATGAACTCATGGAATTAATTTTTTTAGGTACTTCAGCCGGTGTGCCAACCCGCACGCGCAATGTCACGGCAATAtt                         >  2:9092769/1‑140 (MQ=255)
                                                                                                              aaTCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGAAACGTGATGAACTCATGGAATTAATTTTTTTAGGTACTTCAGCCGGTGTGCCAACCCGCACGCGCAATGTCACGGCAATATTGc                       >  2:4255529/1‑140 (MQ=255)
                                                                                                              aaTCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGAAACGTGATGAACTCATGGAATTAATTTTTTTAGGTACTTCAGCCGGTGTGCCAACCCGCACGCGCAATGTCACGGCAATATTGc                       >  2:6617056/1‑140 (MQ=255)
                                                                                                              aaTCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGAAACGTGATGAACTCATGGAATTAATTTTTTTAGGTACTTCAGCCGGTGTGCCAACCCGCACGCGCAATGTCACGGCAATATTGc                       <  1:2075840/140‑1 (MQ=255)
                                                                                                               aTCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGAAACGTGATGAACTCATGGAATTAATTTTTTTAGGTACTTCAGCCGGTGTGCCAACCCGCACGCGCAATGTCACGGCAATATTGCt                      <  1:8630664/140‑1 (MQ=255)
                                                                                                               aTCATAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGAAACGTGATGAACTCATGGAATTAATTTTTTTAGGTACTTCAGCCGGTGTGCCAACCCGCACGCGCAATGTCACGGCAATATTGCt                      <  1:9500032/140‑1 (MQ=255)
                                                                                                                 cATAATGCTCTCCTTTTAGATGTATGACTTATACTAGCCGGAATATTTTTTGAAACGTGATGAACTCATGGAATTAATTTTTTTAGGTACTTCAGCCGGTGTGCCAACCCGCACGCGCAATGTCACGGCAATATTGCTTa                    <  2:8240376/140‑1 (MQ=255)
                                                                                                                  aTAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGAAACGTGATGAACTCATGGAATTAATTTTTTTAGGTACTTCAGCCGGTGTGCCAACCCGCACGCGCAATGTCACGGCAATATTGCTTaa                   >  1:3366819/1‑140 (MQ=255)
                                                                                                                   tAATGCTCTCCTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGAAACGTGATGAACTCATGGAATTAATTTTTTTAGGTACTTCAGCCGGTGTGCCAACCCGCACGCGCAATGTCACGGCAATATTGCTTAAc                  >  1:4752629/1‑140 (MQ=255)
                                                                                                                        ctctCCTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGAAACGTGATGATCTCTTGGAATTAATTTTTTTAGGTACTTCAGCCGGTGTGCCAACCCGCACGCGCAATGTCACGGCAATATTGCTTAACCTGCa             <  1:1516696/140‑1 (MQ=255)
                                                                                                                          ctcCTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGAAACGTGATGAACTCATGGAATTAATTTTTTTAGGTACTTCAGCCGGTGTGCCAACCCGCACGCGCAATGTCACGGCAATATTGCTTAACCTGCAAc           >  1:8891002/1‑140 (MQ=255)
                                                                                                                           tcCTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGAAACGTGATGAACTCATGGAATTAATTTTTTTAGGTACTTCAGCCGGTGTGCCAACCCGCACGCGCAATGTCACGGCAATATTGCTTAACCTGCAACa          >  2:11325436/1‑140 (MQ=255)
                                                                                                                            ccTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTCAAACGTGATGAACTCATTGAATTAATTTTTTTAGGTACTTCAGCCGGTGTGCCAACCCGCACGCGCAATGTCACGGCAATATTGCTGAACCTGCAACAt         <  2:4633704/140‑1 (MQ=255)
                                                                                                                             cTTTTAGATGTATGCCTTATACTAGCCGGAATATTTTTTGAAACGTGATGAACTCATGGAATTAATTTTTTTAGGTACTTCAGCCGGTGTGCCAACCCGCACGCGCAATGTCACGGCAATATTGCTTAACCTGCAACATc        <  1:2141833/140‑1 (MQ=255)
                                                                                                                                 tAGATGTATGCCTTATACTAGCCGGAATATTTTTTGAAACGTGATGAACTCATGGAATTAATTTTTTTAGGTACTTCAGCCGGTGTGCCAACCCGCACGCGCAATGTCACGGCAATATTGCTTAACCTGCAACATCCGAc    <  1:448395/140‑1 (MQ=255)
                                                                                                                                  aGATGTATGCCTTATACTAGCCGGAATATTTTTTGAAACGTGATGAACTCATGGAATTAATTTTTTTAGGTACTTCAGCCGGTGTGCCAACCCGCACGCGCAATGTCACGGCAATATTGCTTAACCTGCAACATCCGAcc   >  1:4603848/1‑140 (MQ=255)
                                                                                                                                       |                                                                                                                                       
ATATCCTGATAAGGGCAATTCTGCTCGACAACAAACACCGCGCAACGCAGTTGTAATAAGGCATAAAGCTGGGAAACCGATAATTCAGAGTGATGCAGATCTTGCCATTCAATCATAATGCTCTCCTTTTAGATGCATGCCTTATACTAGCCGGAATATTTTTTGAAACGTGATGAACTCATGGAATTAATTTTTTTAGGTACTTCAGCCGGTGTGCCAACCCGCACGCGCAATGTCACGGCAATATTGCTTAACCTGCAACATCCGACCC  >  NZ_CP025268/2385463‑2385733

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: