| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 3,353,806 | T→C | *310* (TAA→TAG) | yhcC ← | TIGR01212 family radical SAM protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 3,353,806 | 0 | T | C | 99.5% | 2225.6 / NA | 638 | *310* (TAA→TAG) | yhcC | TIGR01212 family radical SAM protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (357/278); minor base A (1/2); total (358/280) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.85e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 638 total aligned reads displayed.
CAGGTCAACATAATACTGCGCCAGCAGACGAATTTGCTTCATTA‑GGGAATTCCTTCACGACAACCTGCCCCAATAATACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACTTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCGACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCGGGCGACGG > NZ_CP025268/3353669‑3353941 | caGGTCAACATAATACTGCGCCAGCAGACGAATTTGCTTCATTA‑GGGAATTCCTTCACGACAACCTGCCCCAATAATACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTa < 2:2985081/140‑1 (MQ=255) aGGTCAACATAATACTGCGCCAGCAGACGAATTTGCTTCATTA‑GGGAATTCCTTCACGACACCCTGCCCCAATAATACCCAAGTCTGACAGTGACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTAc < 2:2360210/140‑1 (MQ=255) aGGTCAACATAATACTGCGCCAGCAGACGAATTTGCTTCATTA‑GGGAATTCCTTCACGACAACCTGCCCCAATAATACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTAc < 1:2971449/140‑1 (MQ=255) aGGTCAACATAATACTGCGCCAGCAGACGAATTTGCTTCATTA‑GGGAATTCCTTCACGACAACCTGCCCCAATAATACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTAc < 1:7667923/140‑1 (MQ=255) ggTCAACATAATACTGCGCCAGCAGACGAATTTGCTTCATTA‑GGGAATTCCTTCACGACAACCTGCCCCAATAATACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACt < 1:5387640/140‑1 (MQ=255) cAACATAAGACTGCGCCAGCAGACGCATTTGCATCATTA‑GGGAATTCCTTCACGACAACCTGCCCCAATAATACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCg < 1:8945203/140‑1 (MQ=255) aaCATAATACTGCGCCAGCAGACGAATTTGCTTCATTA‑GGGAATTCCTTCACGACAACCTGCCCCAATAATACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGt < 1:7166487/140‑1 (MQ=255) cATAATACTGCGCCAGCAGACGAATTTGCTTCATTAGGGGAATTCCTTCACGACAACCTGCCCCAATAATACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGtt > 1:6748602/1‑140 (MQ=255) aataCTGCGCCAGCAGACGAATTTGCTTCATTA‑GGGAATTCCTTCACGACAACCTGCCCCAATACTACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCGACTCCGTTGGAg < 2:7017367/140‑1 (MQ=255) aataCTGCGCCAGCAGACGAATTTGCTTCATTA‑GGGAATTCCTTCACGACAACCTGCCCCAATAATACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAg < 2:1113048/140‑1 (MQ=255) ataCTGCGCCAGCAGACGAATTTGCTTCATTA‑GGGAATTCCTTCACGACAACCTGCCCCAATAATACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAgg < 2:5472089/140‑1 (MQ=255) taCTGCGCCAGCAGACGAATGTGCTTCATTA‑GGGAATTCCTTCACGACAACCTGCCCCAATAATACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGt < 1:2463328/140‑1 (MQ=255) cgcCAGCAGACGACTTTGCTTCATTA‑GGGAATTCCTTCACGACAACCTGCCCCAATAATACCCAATTCTGACCGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCa > 2:7423252/1‑140 (MQ=255) cgcCAGCAGACGAATTTGCTTCATTA‑GGGAATTCCTTCACGACAACCTGCCCCAATAATACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCa > 2:7785532/1‑140 (MQ=255) cgcCAGCAGACGAATTTGCTTCATTA‑GGGAATTCCTTCACGACAACCTGCCCCAATAATACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCa > 1:813165/1‑140 (MQ=255) cgcCAGCAGACGAATTTGCTTCATTA‑GGGAATTCCTTCACGACAACCTGCCCCAATAATACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCa > 1:9397838/1‑140 (MQ=255) cgcCAGCAGACGAATTTGCTTCATTA‑GGGAATTCCTTCACGACAACCTGCCCCAATAATACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCa > 1:10022446/1‑140 (MQ=255) cgcCAGCAGACGAATTTGCTTCATTA‑GGGAATTCCTTCACGACAACCTGCCCCAATAATACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCa > 1:9994285/1‑140 (MQ=255) cgcCAGCAGACGAATTTGCTTCATTA‑GGGAATTCCTTCACGACAACCTGCCCCAATAATACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCa > 1:10207706/1‑140 (MQ=255) cgcCAGCAGACGAATTTGCTTCATTA‑GGGAATTCCTTCACGACAACCTGCCCCAATAATACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCa > 2:10521300/1‑140 (MQ=255) cgcCAGCAGACGAATTTGCTTCATTA‑GGGAATTCCTTCACGACAACCTGCCCCAATAATACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCa > 2:1268742/1‑140 (MQ=255) cgcCAGCAGACGAATTTGCTTCATTA‑GGGAATTCCTTCACGACAACCTGCCCCAATAATACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCa > 2:609663/1‑140 (MQ=255) cgcCAGCAGACGAATTTGCTTCATTA‑GGGAATTCCTTCACGACAACCTGCCCCAATAATACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCa > 2:3277764/1‑140 (MQ=255) cgcCAGCAGACGAATTTGCTTCATTA‑GGGAATTCCTTCACGACAACCTGCCCCAATAATACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCa > 2:5337115/1‑140 (MQ=255) cgcCAGCAGACGAATTTGCTTCATTA‑GGGAATTCCTTCACGACAACCTGCCCCAATAATACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCa > 2:373495/1‑140 (MQ=255) cgcCAGCAGACGAATTTGCTTCATTA‑GGGAATTCCTTCACGACAACCTGCCCCAATAATACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCa > 2:4653811/1‑140 (MQ=255) cgcCAGCAGACGAATTTGCTTCATTA‑GGGAATTCCTTCACGACAACCTGCCCCAATAATACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCa > 2:9556097/1‑140 (MQ=255) cgcCAGCAGACGAATTTGCTTCATTA‑GGGAATTCCTTCACGACAACCTGCCCCAATAATACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCa > 1:1203465/1‑140 (MQ=255) cgcCAGCAGACGAATTTGCTTCATTA‑GGGAATTCCTTCACGACAACCTGCCCCAATAATACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCa > 1:11222362/1‑140 (MQ=255) cgcCAGCAGACGAATTTGCTTCATTA‑GGGAATTCCTTCACGACAACCTGCCCCAATAATACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCa > 1:10621005/1‑140 (MQ=255) cgcCAGCAGACGAATTTGCTTCATTA‑GGGAATTCCTTCACGACAACCTGCCCCAATAATACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCa > 1:2187403/1‑140 (MQ=255) cgcCAGCAGACGAATTTGCTTCATTA‑GGGAATTCCTTCACGACAACCTGCCCCAATAATACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCa > 1:1073200/1‑140 (MQ=255) gcCAGCAGACGAATTTGCTTCATTA‑GGGAATTCCTTCACGACAACCTGCCCCAATAATACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCAc > 1:5512057/1‑140 (MQ=255) ccAGCAGACGAATTTGCTTCATTA‑GGGAAGTCCTTCACGACAACCTGCCCCAATAATACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACg > 1:2407134/1‑140 (MQ=255) agcagACGAATTTGCTTCATTA‑GGGAATTCCTTCACGACAACCTGCCCCAATACTACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGa < 1:10293925/140‑1 (MQ=255) agcagACGAATTTGCTTCATTA‑GGGAATTCCTTCACGACAACCTGCCCCAATAATACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGa < 1:7867320/140‑1 (MQ=255) agcagACGAATTTGCTTCATTA‑GGGAAGTCCTTCACGACAACCTGCCCCAATAATACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGa < 2:9431102/140‑1 (MQ=255) agcagACGAATGTGCTTCATTA‑GGGAATTCCTTCACGACAACATGCCCCAATAATACCCAATTCTGACCGTTACGTTATAAATTGTGTGAGAAAGGCGGAATTCCCCTCAACGACCGACTCCGTTGGAGGTAGCCACGGa < 2:2535576/140‑1 (MQ=255) aCGAATTTGCTTCATTA‑GGGAATTCCTTCACGACAACCTGCCCCAATAATACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTcc < 1:6093549/140‑1 (MQ=255) gAATTTGCTTCATTA‑GGGAATTCCTTCACGACAACCTGCCCCAATACTACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCa < 1:2542598/140‑1 (MQ=255) aTTTGCTTCATTA‑GGGAATTCCTTCACGACAACCTGCCCCAATAATACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAgc < 2:5609422/140‑1 (MQ=255) tGCTTCATTA‑GGGAATTCCTTCACGACAACCTGCCCCAATAATACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGcc < 1:1772352/140‑1 (MQ=255) tGCTTCATTA‑GGGAATTCCTTCACGACAACCTGCCCCAATAATACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGcc < 1:9073065/140‑1 (MQ=255) tGCTTCATTA‑GGGAATTCCTTCACGACAACCTGCCCCAATAATACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGcc < 1:3603973/140‑1 (MQ=255) cTTCATTA‑GGGAATTCCTTCACGACAACCTGCCCCAATAATACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGa < 1:6191020/140‑1 (MQ=255) cTTCATTA‑GGGAATTCCTTCACGACAACCTGCCCCAATAATACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGa < 2:9248024/140‑1 (MQ=255) ttCATTA‑GGGAATTCCTTCACGACAACCTGCCCCAATAATACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGAt > 2:5122677/1‑140 (MQ=255) ttCATTA‑GGGAATTCCTTCACGACAACCTGCCCCAATAATACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGAt < 1:6612452/140‑1 (MQ=255) ttCATTA‑GGGAATTCCTTCACGACAACCTGCCCCAATAATACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGAt < 2:10838032/140‑1 (MQ=255) ttCATTA‑GGGAATTCCTTCACGACAACCTGCCCCAATAATACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGAt > 1:830246/1‑140 (MQ=255) aTTA‑GGGAATTCCTTCACGACAACCTGCCCCAATAATACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATccc > 1:6429894/1‑140 (MQ=255) a‑GGGAATTCCTTCACGACAACCTGCCCCAATAATACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGt < 1:1628695/140‑1 (MQ=255) gAATTCCTTCACGACAACCTGCCCCAATAATACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACg > 1:1403428/1‑140 (MQ=255) aaTTCCTTCACGACAACCTGCCCCAATAATACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGc < 1:1097559/140‑1 (MQ=255) aaTTCCTTCACGACAACCTGCCCCAATAATACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGc < 1:3234818/140‑1 (MQ=255) ttCCTTCACGACCACCTGCCCCAATACTCCCCAATTCTGACAGGTACGTTATAAATGGTGTGAGAACTGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCa < 1:7440619/140‑1 (MQ=255) ttCCTTCACGACAACCTGCCCCAATAATACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACTACCTACTCCGTTGGAGGTCGCCAAGGACGTCACAGCGCCGATCCCTGTCCGACa > 2:6372243/1‑140 (MQ=255) ttCCTTCACGACAACCTGCCCCAATAATACCCAATTCTGACAGTTACGTTATAAATTGNGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCa > 1:5991735/1‑140 (MQ=255) ccTTCACGACAACCTGCCCCAATAATACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATg < 2:4074268/140‑1 (MQ=255) ccTTCACGACAACCTGCCCCAATAATACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATg < 1:4330896/140‑1 (MQ=255) aCGACAACCTGCCCCAATAATACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGttcat < 2:1564536/140‑1 (MQ=255) cGACAACCTGCCCCAATAATACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGttcatt < 2:3056753/140‑1 (MQ=255) ccTGCCCCACTAATACCCACTTCTGACAGTTACGTTATCAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCCGCGCCGATCCCTGTACGCCATGTTCATTCAGATa < 1:973549/140‑1 (MQ=255) ccTGCCCCAATAATACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATa > 2:8420364/1‑140 (MQ=255) ccTGCCCCAATAATACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATa < 2:4813573/140‑1 (MQ=255) ccccAATAATACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGa > 2:2080972/1‑140 (MQ=255) ccccAATAATACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGa > 2:8027636/1‑140 (MQ=255) cccAATAATACCCACTTCTGACAGTTACGTTATAAATTGTGTGAGAAAAGCGGAATTCCCCTCAACGACCAACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGaa < 2:2241448/140‑2 (MQ=255) ataataCCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAg < 1:8537393/140‑1 (MQ=255) taataCCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGc < 2:1137450/140‑1 (MQ=255) taataCCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGc > 1:2284245/1‑140 (MQ=255) taataCCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGc < 1:6939813/140‑1 (MQ=255) cccAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCGAc > 2:3458737/1‑140 (MQ=255) cccAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCGAc > 2:8956017/1‑140 (MQ=255) cAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCGACCa > 1:1853508/1‑140 (MQ=255) ttCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCGACCAtac > 2:10151650/1‑138 (MQ=255) ttCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCGACCATTc > 2:75632/1‑140 (MQ=255) ttCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCGACCATTc > 2:10627099/1‑140 (MQ=255) aCAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCGACCATTCCCGTc > 2:4442052/1‑140 (MQ=255) gTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGcc < 2:8240052/83‑1 (MQ=255) tACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCGACCATTCCCGTCCATCg > 2:4211815/1‑140 (MQ=255) tACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCGACCATTCCCGTCCATCg > 1:4040937/1‑140 (MQ=255) tACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCGACCATTCCCGTCCATCg > 2:5767308/1‑140 (MQ=255) cGTTATAAAGTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGGTCATTCAGATAGCGATCCAGCTCGACCATTCCCGTCCATCGAt < 2:656626/140‑1 (MQ=255) tataAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCGACCATTCCCGTCCATCGAtttt < 1:9557996/140‑1 (MQ=255) taAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCGACCATTCCCGTCCATCGATTTTCg > 1:4205601/1‑140 (MQ=255) aaTTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCGACCATTCCCGTCCATCGATTTTCGca < 1:3458737/140‑1 (MQ=255) aTTGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCGACCATTCCCGTCCATCGATTTTCGcac < 2:1100484/140‑1 (MQ=255) ttGTGTGAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCGACCATTCCCGTCCATCGATTTTCGcacc < 1:3734911/140‑1 (MQ=255) tgtgAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGCGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCAGGGTCAGTCAGATAGCGATCCAGCGCGACCCTTCCCGTCCATCGAGGGTCGCACcaca > 2:8619529/1‑140 (MQ=255) tgtgAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCGACCATTCCCGTCCATCGATTTTCGCACcaca > 2:1845413/1‑140 (MQ=255) tgtgAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCGACCATTCCCGTCCATCGATTTTCGCACcaca > 1:4975763/1‑140 (MQ=255) tgtgAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCGACCATTCCCGTCCATCGATTTTCGCACcaca < 1:4712866/140‑1 (MQ=255) tgtgAGAAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCGACCATTCCCGTCCATCGATTTTCGCACcaca < 2:9749889/140‑1 (MQ=255) tgtgAGAAATGCGGAATTCCCCTCAACGACCTACTCCGGTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCCTGTTCATTCAGATAGCGATCCAGCTCGACCATTCCCGTCCATCGATTGTCGCACcaca > 2:1649479/1‑140 (MQ=255) gaAATGCGGAATTCCCCTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCGACCATTCCCGTCCATCGATTTTCGCACCACAGCGGa < 2:2697282/140‑1 (MQ=255) tcGGAATTCCCCTCAACGACCTACTCCGTTGGAGGGTGCCACTGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCTTTCAGATAGCGATCCAGCTCGACCATTACCGTCCATCGATTTTCGCACCACAGCGGagcaag < 2:6850342/139‑1 (MQ=255) cTCAACGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCGACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCGGGc > 2:5991418/1‑140 (MQ=255) aaCGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCGACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCGGGCGAc > 1:5731007/1‑140 (MQ=255) cGACCTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCGACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCGGGCGACgg > 2:3623407/1‑140 (MQ=255) | CAGGTCAACATAATACTGCGCCAGCAGACGAATTTGCTTCATTA‑GGGAATTCCTTCACGACAACCTGCCCCAATAATACCCAATTCTGACAGTTACGTTATAAATTGTGTGAGAAATGCGGAATTCCCCTCAACGACTTACTCCGTTGGAGGTAGCCACGGACGTCCCAGCGCCGATCCCTGTACGCCATGTTCATTCAGATAGCGATCCAGCTCGACCATTCCCGTCCATCGATTTTCGCACCACAGCGGAGCAAGCAGCGTCGGGCGACGG > NZ_CP025268/3353669‑3353941 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |