| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 3,695,528 | A→G | Y133H (TAT→CAT) | bcsA ← | UDP‑forming cellulose synthase catalytic subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 3,695,528 | 0 | A | G | 99.6% | 2455.0 / NA | 704 | Y133H (TAT→CAT) | bcsA | UDP‑forming cellulose synthase catalytic subunit |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (259/442); minor base T (1/2); total (260/444) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 704 total aligned reads displayed.
GATAAACTGCGCCAGCGGGTTAAACGGCTGAGTAACGCAGATTAACGCCAGAATCAGCGAGAAGGTGACGATGATACCGAGGATCAACCGCCGCGCCCCGGCACTCAAATGACCGAGCTC‑TTTTTTCTCATCCAGATACTGTGTTTTATGGCTAACGCGCTCAGGCAGCTCGTTCATCCATTGATGGTAACGTCCACGAATATTTTGCAGACCTGAAAATGCCCGCCTGCGCGGTTTCGGCGTTTCTTTGCGCGATGCACCGATCAATAACCAG > NZ_CP025268/3695391‑3695664 | gATAAACTGCGCCAGCGGGTTAAACGGCTGAGTAACGCAGATTAACGCCAGAATCAGCGAGAAGGTGACGATGATACCGAGGATCAACCGCCGCGCCCCGGCACTCAAATGACCGAGCTC‑TTTTTTCTCATCCAGATGCt < 1:9738501/140‑1 (MQ=255) aTAAACTGCGCCAGCGGGTTAAACGGCTGAGTAACGCTGATTAACTCCAGAATCAGCGAGAAGGTGACGATGTTACCGAGGATCAACCGCCGCGCCCCGGCACTCAAATGACCGATCTC‑TTTTTTCTCATCCAGATGCtg < 1:4204032/140‑1 (MQ=255) aTAAACTGCGCCAGCGGGTTAAACGGCTGAGTAACGCAGATTAACGCCAGAATCAGCGAGAAGGTGACGATGATACCGAGGATCAACCGCCGCGCCCCGGCACTCAAATGACCGAGCTC‑TTTTTTCTCATCCAGATGCtg < 2:9145245/140‑1 (MQ=255) tAAACTGCGCCAGCGGGTTAAACGGCTGAGTAACGCAGATTAACGCCAGAATCAGCGAGAAGGTGACGATGATACCGAGGATCAACCGCCGCGCCCCGGCACTCAAATGACCGAGCTC‑TTTTTTCTCATCCAGATGCtgt > 2:848387/1‑140 (MQ=255) tAAACTGCGCCAGCGGGTTAAACGGCTGAGTAACGCAGATTAACGCCAGAATCAGCGAGAAGGTGACGATGATACCGAGGATCAACCGCCGCGCCCCGGCACTCAAATGACCGAGCTC‑TTTTTTCTCATCCAGATGCtgt > 1:8082916/1‑140 (MQ=255) tAAACTGCGCCAGCGGGTTAAACGGCTGAGTAACGCAGATTAACGCCAGAATCAGCGAGAAGGTGACGATGATACCGAGGATCAACCGCCGCGCCCCGGCACTCAAATGACCGAGCTC‑TTTTTTCTCATCCAGATGCtgt < 2:8030934/140‑1 (MQ=255) aCTGCGCCAGCGGGTTAAACGGCTGAGTAACGCAGATTAACGCCAGAATCAGCGAGAAGGTGACGATGATACCGAGGATCAACCGCCGCGCCCCGGCACTCAAATGACCGAGCTC‑TTTTTTCTCATCCAGATGCTGTGtt > 1:10714545/1‑140 (MQ=255) tGCGCCAGCGGGTTAAACGGCTGAGTAACGCAGATTAACGCCAGAATCAGCGAGAAGGTGACGATGATACCGAGGATCAACCGCCGCGCCCCGGCACTCAAATGACCGAGCTC‑TTTTTTCTCATCCAGATGCTGTGtttt < 1:5487676/140‑1 (MQ=255) gcgcCAGCGGGTTAAACGGCTGAGTAACGCAGATTAACGCCAGAATCAGCGAGAAGGTGACGCTGATACCGAGGATCAACCGCCGCGCCCCGGCACTCAAATGACCGAGCTC‑TTTTTTCTCATCCAGATGCTGTGTTTTa > 2:702499/1‑140 (MQ=255) gcgcCAGCGGGTTAAACGGCTGAGTAACGCAGATTAACGCCAGAATCAGCGAGAAGGTGACGATGATACCGAGGATCAACCGCCGCGCCCCGGCACTCAAATGACCGAGCTC‑TTTTTTCTCTTCCAGATGCTGGGTGTTa > 2:7284102/1‑140 (MQ=255) gcgcCAGCGGGTTAAACGGCTGAGTAACGCAGATTAACGCCAGAATCAGCGAGAAGGTGACGATGATACCGAGGATCAACCGCCGCGCCCCGGCACTCAAATGACCGAGCTC‑TTTTTTCTCATCCAGATGCTGTGTTTTa > 2:4433067/1‑140 (MQ=255) gcgcCAGCGGGTTAAACGGCTGAGTAACGCAGATTAACGCCAGAATCAGCGAGAAGGTGACGATGATACCGAGGATCAACCGCCGCGCCCCGGCACTCAAATGACCGAGCTC‑TTTTTTCTCATCCAGATGCTGTGTTTTa > 1:7608225/1‑140 (MQ=255) cgcCAGCGGGTTAAACGGCTGAGTAACGCAGATTAACGCCAGAATCAGCGAGAAGGTGACGATGATACCGAGGATCAACCGCCGCGCCCCGGCACTCAAATGACCGAGCTC‑TTTTTTCTCATCCAGATGCTGTGTTTTAt < 1:3485546/140‑1 (MQ=255) cGGGTTAAACGGCTGAGTAACGCAGATTAACGCCAGACTCAGCGAGAAGGTGACGATGATACCGAGGATCAACCGCCGCGCCCCGGCACTCAAATGACCGAGCTC‑TTTTTTCTCATCCAGATGCTGTGTTTTATGGCTaa < 2:7921547/140‑1 (MQ=255) cGGGTTAAACGGCTGAGTAACGCAGATTAACGCCAGAATCAGCGAGAAGGTGACGATGATACCGGGGATCAACCGCCGCGCCCCGGCACTCAAATGACCGAGCTC‑TGTTTTCGCATCCAGATGCTGGGGTTTATGGCtca > 1:8448703/1‑138 (MQ=255) cGGGTTAAACGGCTGAGTAACGCAGATTAACGCCAGAATCAGCGAGAAGGTGACGATGATACCGAGGATCAACCGCCGCGCCCCGGCACTCAAATGACCGAGCTC‑TTTTTTCTCTTCCAGATGCTGTGTTTTATGGCTaa < 1:4745945/140‑1 (MQ=255) cGGGTTAAACGGCTGAGTAACGCAGATTAACGCCAGAATCAGCGAGAAGGTGACGATGATACCGAGGATCAACCGCCGCGCCCCGGCACTCAAATGACCGAGCTC‑TTTTTTCTCATCCAGATGCTGTGTTTTATGGCTaa < 2:9809071/140‑1 (MQ=255) cGGGTTAAACGGCTGAGTAACGCAGATTAACGCCAGAATCAGCGAGAAGGTGACGATGATACCGAGGATCAACCGCCGCGCCCCGGCACTCAAATGACCGAGCTC‑TTTTTTCTCATCCAGATGCTGTGTTTTATGGCTaa < 1:10869977/140‑1 (MQ=255) cGGGTTAAACGGCTGAGTAACGCAGATTAACGCCAGAATCAGCGAGAAGGTGACGATGATACCGAGGATCAACCGCCGCGCCCCGGCACTCAAATGACCGAGCTC‑TATTTTCTCATCCAGATGCTGTGTTTTATGGCTaa < 1:11005142/140‑1 (MQ=255) ggTTAAACGGCTGAGTAACGCAGATTAACGCCAGAATCAGCGAGAAGGTGACGATGATACCGAGGATCAACCGCCGCGCCCCGGCACTCAAATGACCGAGCTC‑TTTTTTCTCATCCAGATGCTGTGTTTTATGGCTAAcg > 2:1006763/1‑140 (MQ=255) aCGGCTGAGTAACGCAGATTAACGCCAGAATCAGCGAGAAGGTGACGATGATACCGAGGATCAACCGCCGCGCCCCGGCACTCAAATGACCGAGCTC‑TTTTTTCTCATCCAGATGCTGTGTTTTATGGCTAACGCGCTCa < 2:6344105/140‑1 (MQ=255) cGGCTGAGTAACGCAGATTAACGCCAGAATCAGCGAGAAGGTGACGATGATACCGAGGATCAACCGCCGCGCCCCGGCACTCAAATGACCGAGCTC‑GTTTTTCTCATCCAGATTGTGTGTTTTATGGCTAACTCGCTCAg > 2:2859022/1‑140 (MQ=255) ggCTGAGTAACGCAGATTAACGCCAGAATCAGCGAGAAGGTGACGATGATACCGAGGATCAACCGCCGCGCCCCGGCACTCAAATGACCGAGCTC‑TTTTTTCTCATCCAGATGCTGTGTTTTATGGCTAACGCGCTCAgg < 2:10331490/140‑1 (MQ=255) ggCTGAGTAACGCAGATTAACGCCAGAATCAGCGAGAAGGTGACGATGATACCGAGGATCAACCGCCGCGCCCCGGCACTCAAATGACCGAGCTC‑TTTTTTCTCATCCAGATGCTGTGTTTTATGGCTAACGCGCTCAgg < 2:7542475/140‑1 (MQ=255) cTGAGTAACGCAGATTAACGCCAGAATCAGCGAGAAGGTGACGATGATACCGAGGATCAACCGCCGCGCCCCGGCACTCAAATGACCGAGCTC‑TTTTTTCTCATCCAGATGCTGTGTTTTATGGCTAACGCGCTCAGGCa < 2:940082/140‑1 (MQ=255) tGAGTAACGCAGATTAACGCCAGAATCAGCGAGAAGGTGACGATGATACCGAGGATCAACCGCCGCGCCCCGGCACTCAAATGACCGAGCTC‑TTTTTTCTCATCCAGATGCTGTGTTTTATGGCTAACGCGCTCAGGCAg > 1:10023185/1‑140 (MQ=255) tGAGTAACGCAGATTAACGCCAGAATCAGCGAGAAGGTGACGATGATACCGAGGATCAACCGCCGCGCCCCGGCACTCAAATGACCGAGCTC‑TTTTTTCTCATCCAGATGCTGTGTTTTATGGCTAACGCGCTCAGGCAg > 2:2976940/1‑140 (MQ=255) tGAGTAACGCAGATTAACGCCAGAATCAGCGAGAAGGTGACGATGATACCGAGGATCAACCGCCGCGCCCCGGCACTCAAATGACCGAGCTC‑TTTTTTCTCATCCAGATGCTGTGTTTTATGGCTAACGCGCTCAGGCAg < 1:5065977/140‑1 (MQ=255) aGTAACGCAGATTAACGCCAGAATCAGCGAGAAGGTGACGATGATACCGAGGATCAACCGCCGCGCCCCGGCACTCAAATGACCGAGCTC‑TTTTTTCTCATCCAGATGCTGTGTTTTATGGCTAACGCGCTCAGGCAGCt < 1:2220618/140‑1 (MQ=255) tAACGCAGATTAACGCCAGAATCAGCGAGAAGGTGCCGATGATACCGAGGATCAACCGCCGCGCCCCGGCACTCAAATGACCGAGCTC‑TTTATTCTCATCCAGATGCTGTGTTTTATGGCTAACGCGCTCAGGCAGCTCg < 1:2568902/140‑1 (MQ=255) gCAGATTATCGCCAGAATCAGCGAGAAGGTGACGATGATACCGAGGATCAACCGCCGCGCCCCGGCACTCAAATGACCGAGCTC‑TTTTTTCTCATCCAGATGCTGTGTTTTATGGCTAACGCGCTCAGGCAGCTCGTTCa < 2:4258932/140‑1 (MQ=255) gCAGATTAACGCCAGAATCAGCGAGAAGGTGACGATGATACCGAGGATCAACCGCCGCGCCCCGGCACTCAAATGACCGAGCTC‑TTTTTTCTCATCCAGATGCTGTGTTTTATGGCTAACGCGCTCAGGCAGCTCGTTCa < 1:2393153/140‑1 (MQ=255) cAGATTAACGCCAGAATCAGCGAGAAGGTGACGATGATACCGAGGATCAACCGCCGCGCCCCGGCACTCAAATGACCGAGCTC‑TTTTTTCTCATCCAGATGCTGTGTTTTATGGCTAACGCGCTCAGGCAGCTCGTTCAt > 2:17273/1‑140 (MQ=255) cAGATTAACGCCAGAATCAGCGAGAAGGTGACGATGATACCGAGGATCAACCGCCGCGCCCCGGCACTCAAATGACCGAGCTC‑TAATTTCTCATCCAGATGCTGTGTTTTATGGCTAACGCGCTCAGGCAGCTCGTTCAt < 1:8163104/140‑1 (MQ=255) aTTAACGCCAGAATCAGCGAGAAGGTGACGATGATACCGAGGATCAACCGCCGCGCCCCGGCACTCAAATGACCGAGCTC‑TTTTTTCTCATCCAGATGCTGTGTTTTATGGCTAACGCGCTCAGGCAGCTCGTTCATCCa > 1:5627955/1‑140 (MQ=255) aTTAACGCCAGAATCAGCGAGAAGGTGACGATGATACCGAGGATCAACCGCCGCGCCCCGGCACTCAAATGACCGAGCTC‑TTTTTTCTCATCCAGATGCTGTGTTTTATGGCTAACGCGCTCAGGCAGCTCGTTCATCCa > 2:3670452/1‑140 (MQ=255) aTTAACGCCAGAATCAGCGAGAAGGTGACGATGATACCGAGGATCAACCGCCGCGCCCCGGCACTCAAATGACCGAGCTC‑TTTTTTCTCATCCAGATGCTGTGTTTTATGGCTAACGCGCTCAGGCAGCTCGTTCATCCa > 1:6669298/1‑140 (MQ=255) aTTAACGCCAGAATCAGCGAGAAGGTGACGATGATACCGAGGATCAACCGCCGCGCCCCGGCACTCAAATGACCGAGCTC‑TTTTTTCTCATCCAGATGCTGTGTTTTATGGCTAACGCGCTCAGGCAGCTCGTTCATCCa > 2:624595/1‑140 (MQ=255) aTTAACGCCAGAATCAGCGAGAAGGTGACGATGATACCGAGGATCAACCGCCGCGCCCCGGCACTCAAATGACCGAGCTC‑TTTTTTCTCATCCAGATGCTGTGTTTTATGGCTAACGCGCTCAGGCAGCTCGTTCATCCa > 1:7762068/1‑140 (MQ=255) aTTAACGCCAGAATCAGCGAGAAGGTGACGATGATACCGAGGATCAACCGCCGCGCCCCGGCACTCAAATGACCGAGCTC‑TTTTTTCTCATCCAGATGCTGTGTTTTATGGCTAACGCGCTCAGGCAGCTCGTGCATCCa > 2:9550434/1‑140 (MQ=255) aTTAACGCCAGAATCAGCGAGAAGGTGACGATGATACCGAGGAGCAACCGCCGCGCCCCGGCACGCAAATGACCGAGCGC‑TTTTTTCTCATCCCGATGCGGTGTTTGAGGGCTACCGCGCTCAGGCAGCTCGGTCATcct > 2:11294687/1‑139 (MQ=255) ttAACGCCAGAATCAGCGAGAAGGTGACGATGATACCGAGGATCAACCGCCGCGCCCCGGCACTCAAATGACCGAGCTC‑TTTTTTCTCATCCAGATGCTGTGTTTTATGGCTAACGCGCTCAGGCAGCTCGTTCATCCAt < 1:9545209/140‑1 (MQ=255) gAATCAGCGAGAAGGTGACGATGATACCGAGGATCAACCGCCGCGCCCCGGCACTCAAATGACCGAGCTC‑TTTTTTCTCATCCAGATGCTGTGTTTTATGGCTAACGCGCTCAGGCAGCTCGTTCATCCATTGATGGTaa < 1:7861008/140‑1 (MQ=255) agcAGCGCGACGGTGACGATGATACCGAGGATCCACCGCCGCGCCCCGGCACTCAACTGACCGAGCTC‑ATTTTTCTCATCCAGATGCTGTGTTTTATGGCTAACGCGCTCAGGCAGCTCGTTCATCCATTGATGGTAACg < 2:3837549/138‑1 (MQ=255) aTCAGCGAGAAGGTGACGATGATACCGAGGATCAACCGCCGCGCCCCGGCACTCAAATGACCGAGCTC‑TTTTTTCTCATCCAGATGCTGTGTTTTATGGCTAACGCGCTCAGGCAGCTCGTTCATCCATTGATGGTAACg < 2:2520688/140‑1 (MQ=255) aTCAGCGAGAAGGTGACGATGATACCGAGGATCAACCGCCGCGCCCCGGCACTCAAATGACCGAGCTC‑TTTTTTCTCATCCAGATGCTGTGTTTTATGGCTAACGCGCTCAGGCAGCTCGTTCATCCATTGATGGTAACg < 2:554454/140‑1 (MQ=255) cAGCGAGAAGGTGACGATGATACCGAGGATCAACCGCCGCGCCCCGGCACTCAAATGACCGAGCTC‑TTTTTTCTCATCCAGATGCTGTGTTTTATGGCTAACGCGCTCAGGCAGCTCGTTCATCCATTGATGGTAACGTc < 2:3475913/140‑1 (MQ=255) gCGAGAAGGTGACGATGATACCGAGGATCAACCGCCGCGCCCCGGCACTCAAATGACCGAGCTC‑TTTTTTCTCATCCAGATGCTGTGTTTTATGGCTAACGCGCTCAGGCAGCTCGTTCATCCATTGATGGTAACGTCCa > 2:48973/1‑140 (MQ=255) agaAGGTGACGATGATACCGAGGATCAACCGCCGCGCCCCGGCACTCAAATGACCGAGCTC‑TTTTTTCTCATCCAGATGCTGTGTTTTATGGCTAACGCGCTCAGGCAGCTCGTTCATCCATTGATGGTAACGTCCACGa < 1:608813/140‑1 (MQ=255) aaGGTGACGATGATACCGAGGATCAACCGCCGCGCCCCGGCACTCAAATGACCGAGCTC‑TTTTTTCTCATCCAGATGCTGTGTTTTATGGCTAACGCGCTCAGGCAGCTCGTTCATCCATTGATGGTAACGTCCACGAat > 1:9002328/1‑140 (MQ=255) tGACGATGATACCGAGGATCAACCGCCGCGCCCCGGCACTCAAATGACCGAGCTC‑TTTTTTCTCATCCAGATGCTGTGTTTTATGGCTAACGCGCTCAGGCAGCTCGTTCATCCATTGATGGTAACGTCCACGAATAttt > 1:1665992/1‑140 (MQ=255) aCGATGATACCGAGGATCAACCGCCGCGCCCCGGCACTCAAATGACCGAGCTC‑TTTTTTCTCATCCAGCTGATGTGTTTTATGGCTAACGCGCTCAGGCAGCTCGTTCATCCATTGATGGTAACGTCCACGAATATTTTg < 2:10966130/140‑1 (MQ=255) aCGATGATACCGAGGATCAACCGCCGCGCCCCGGCACTCAAATGACCGAGCTC‑TTTTTTCTCATCCAGATGCTGTGTTTTATGGCTAACGCGCTCAGGCAGCTCGTTCATCCATTGATGGTAACGTCCACGAATATTTTg > 1:7206631/1‑140 (MQ=255) aCGATGATACCGAGGATCAACCGCCGCGCCCCGGCACTCAAATGACCGAGCTC‑TTTTTTCTCATCCAGATGCTGTGTTTTATGGCTAACGCGCTCAGGCAGCTCGTTCATCCATTGATGGTAACGTCCACGAATATTTTg < 1:10569372/140‑1 (MQ=255) gatgatACCGAGGATCAACCGCCGCGCCCCGGCACTCAAATGACCGAGCTC‑TTTTTTCTCATCCAGATGCTGTGTTTTATGGCTAACGCGCTCAGGCAGCTCGTTCATCCATTGATGGTAACGTCCACGAATATTTTGCa < 2:3212082/140‑1 (MQ=255) gatACCGAGGATCAACCGCCGCGCCCCGGCACTCAAATGACCGAGCTC‑TTTTTTCTCATCCAGATGCTGTGTTTTATGGCTAACGCGCTCAGGCAGCTCGTTCATCCATTGATGGTAACGTCCACGAATATTTTGCAGAc > 1:2936939/1‑140 (MQ=255) aCCGAGGATCAACCGCCGCGCCCCGGCACTCAAATGACCGAGCTC‑TTTTTTCTCATCCAGATGCTGTGTTTTATGGCTAACGCGCTCAGGCAGCTCGTTCATCCATTGATGGTAACGTCCACGAATATTTTGCAGACCTg > 1:9152279/1‑140 (MQ=255) aGGATCAACCGCCGCGCCCCGGCACTCAAATGACCGAGCTC‑TTTTTTCTCATCCAGATGCTGTGTTTTATGGCTAACGCGCTCAGGCAGCTCGTTCATCCATTGATGGTAACGTCCACGAATATTTTGCAGACCTGaaaa > 1:4629500/1‑140 (MQ=255) aGGATCAACCGCCGCGCCCCGGCACTCAAATGACCGAGCTC‑TTTTTTCTCATCCAGATGCTGTGTTTTATGGCTAACGCGCTCAGGCAGCTCGTTCATCCATTGATGGTAACGTCCACGAATATTTTGCAGACCTGaaaa > 1:5296098/1‑140 (MQ=255) aGGATCAACCGCCGCGCCCCGGCACTCAAATGACCGAGCTC‑TTTTTTCTCATCCAGATGCTGTGTTTTATGGCTAACGCGCTCAGGCAGCTCGTTCATCCATTGATGGTAACGTCCACGAATATTTTGCAGACCTGaaaa > 2:2014990/1‑140 (MQ=255) cccgccgCGCCCCGCCACTCAAATGACCTAGCAA‑TTTTGCCACAGCCAGATGCTGTGTATTATGGCTAACGCGCACAGTCAGCTCCTTAATCCATTGATGGTAACGTCCACGAATATTTTGAAGACCTGTAAATGccctc < 2:8297803/139‑3 (MQ=255) aCCGCCGCGCCCCGGCACTCAAATGACCGAGCTC‑TTTTTTCTCATCCAGATGCTGTGTTTTATGGCTAACGCGCTCAGGCAGCTCGTTCATCCATTGATGGTAACGTCCACGAATATTTTGCAGACCTGAAAATGCCCGc < 2:1441883/140‑1 (MQ=255) aCCGCCGCGCCCCGGCACTCAAATGACCGAGCTC‑TTTTTTCTCATCCAGATGCTGTGTTTTATGGCTAACGCGCTCAGGCAGCTCGTTCATCCATTGATGGTAACGTCCACGAATATTTTGCAGACCTGAAAATGCCCGc > 2:4618608/1‑140 (MQ=255) ccgcGCCCCGGCACTCAAATGACCGAGCTC‑TTTTTTCTCATCCAGATGCTGTGTTTTATGGCTAACGCGCTCAGGCAGCTCGTTCATCCATTGATGGTAACGTCCACGAATATTTTGCAGACCTGAAAATGCCCGCCTgc > 1:7358549/1‑140 (MQ=255) cgcgCCCCGGCACTCAAATGACCGAGCTC‑TTTTTTCTCATCCAGATGCTGTGTTTTATGGCTAACGCGCTCAGGCAGCTCGTTCATCCATTGATGGTAACGTCCACGAATATTTTGCAGACCTGAAAATGCCCGCCTgcg < 1:4294533/140‑1 (MQ=255) cgcgCCCCGGCACTCAAATGACCGAGCTC‑TTTTTTCTCATCCAGATGCTGTGTTTTATGGCTAACGCGCTCAGGCAGCTCGTTCATCCATTGATGGTAACGTCCACGAATATTTTGCAGACCTGAAAATGCCCGCCTgcg > 1:589709/1‑140 (MQ=255) cgcgCCCCGGCACTCAAATGACCGAGCTC‑TTTTTTCTCATCCAGATGCTGTGTTTTATGGCTAACGCGCTCAGGCAGCTCGTTCATCCATTGATGGTAACGTCCACGAATATTTTGCAGACCTGAAAATGCCCGCCTgcg < 2:10543547/140‑1 (MQ=255) cgcgCCCCGGCACTCAAATGACCGAGCTC‑TTTTTTCTCATCCAGATGCTGTGTTTTATGGCTAACGCGCTCAGGCAGCTCGTTCATCCATTGATGGTAACGTCCACGAATATTTTGCAGACCTGAAAATGCCCGCCTgcg < 1:9609023/140‑1 (MQ=255) ccccGGCACTCAAATGACCGAGCTC‑TATTTTCTCATCCAGATGCTGTGTTTTATGGCTAACGCGCTCAGGCAGCTCGTTCATCCATTGATGGTAACGTCCACGAATATTTTGCAGACCTGAAAATGCCCGCCTGCGCGGt < 1:6273665/140‑1 (MQ=255) cccGGCACTCACATGCCCGAGCTCATGGTTACTCATCCAGAAGCTGTGTTAGATGGCTCACGCGCTCAGGCAGCTCGTTCATCCATTGCTGGTAACGTCCACGCCTATTTTGCAGACCAGAAAATGCCCGCCTGCGCGGt < 2:3993551/140‑1 (MQ=255) aaTGACCGAGCTC‑TTTTTTCTCATCCAGATGCTGTGTTTTATGGCTAACGCGCTCAGGCAGCTCGTTCATCCATTGATGGTAACGTCCACGAATATTTTGCAGACCTGAAAATGCCCGCCTGCGCGGTTTCGGCGTTTCt < 1:1831210/140‑1 (MQ=255) tGACCGAGCTC‑TTTTTTCTCATCCAGATGCTGTGTTTTATGGCTAACGCGCTCAGGCAGCTCGTTCATCCATTGATGGTAACGTCCACGAATATTTTGCAGACCTGAAAATGCCCGCCTGCGCGGTTTCGGCGTTTCttt < 1:7454309/140‑1 (MQ=255) tGACCGAGCTC‑TTTTTTCTCATCCAGATGCTGTGTTTTATGGCTAACGCGCTCAGGCAGCTCGTTCATCCATTGATGGTAACGTCCACGAATATTTTGCAGACCTGAAAATGCCCGCCTGCGCGGTTTCGGCGTTTCttt < 1:4869797/140‑1 (MQ=255) gACCGAGCTC‑TTTTTTCTCATCCAGATGCTGTGTTTTATGGCTAACGCGCTCAGGCAGCTCGTTCATCCATTGATGGTAACGTCCACGAATATTTTGCACACCTGAAAATGCCCGCCTGCGCGGTTTCGGCGTTTCTTTg < 2:6534688/140‑1 (MQ=255) ccGAGCTC‑TTTTTTCTCATCCAGATGCTGTGTTTTATGGCTAACGCGCTCAGGCAGCTCGTTCATCCATTGATGGTAACGTCCACGAATATTTTGCAGACCTGAAAATGCCCGCCTGCGCGGTTTCGGCGTTTCTTTgcg < 2:8868422/140‑1 (MQ=255) ccGAGCTC‑TTTTTTCACCTCCAGAAGCTGTGTTTGATGGCTAACGCGCTCAGGCAGCTCGTTCATCCATTGATGGTAACGTCCACGAATATTTTGCAGACCTGAAAATGCCCGCCTGCGCGGTTTCGGCGTTTCTTTgcg < 2:6033911/140‑1 (MQ=255) cGAGCTC‑TTTTTTCTCATCCAGATGCTGTGTTTTATGGCTAACGCGCTCAGGCAGCTCGTTCATCCATTGATGGTAACGTCCACGAATATTTTGCAGACCTGAAAATGCCCGCCTGCGCGGTTTCGGCGTTTCTTTgcgc > 1:6547942/1‑140 (MQ=255) gAGCTC‑TTTTTTCTCATCCAGATGCTGTGTTTTATGGCTAACGCGCTCAGGCAGCTCGTTCATCCATTGATGGTAACGTCCACGAATATTTTGCAGACCTGAAAATGCCCGCCTGCGCGGTTTCGGCGTTTCTTTGcgcg < 2:6773458/140‑1 (MQ=255) gAGCTC‑TTTTTTCTCATCCAGATGCTGTGTTTTATGGCTAACGCGCTCAGGCAGCTCGTTCATCCATTGATGGTAACGTCCACGAATATTTTGCAGACCTGAAAATGCCCGCCTGCGCGGTTTCGGCGTGTCTTTGcgcg < 2:6885311/140‑1 (MQ=255) gAGCTC‑TTTTTGCTCATCCAGATGCTGTGTTTTATGGCTAACGCGCTCAGGCAGCTCGTTCATCCATTGATGGTAACGTCCACGAATATTTTGCAGACCTGAAAATGCCCGCCTGCGCGGTTTCGGCGTTTCTTTGcgcg < 1:320553/140‑1 (MQ=255) gCTC‑TTTTTTCTCATCCAGATGCTGTGTTTTATGGCTAACGCGCTCAGGCAGCTCGTTCATCCATTGATGGTAACGTCCACGAATATTTTGCAGACCTGAAAATGCCCGCCTGCGCGGTTTCGGCGTTTCTTTGCGCGAt < 1:3763082/140‑1 (MQ=255) gCTC‑TTTTTTCTCATCCAGATGCTGTGTTTTATGGCTAACGCGCTCAGGCAGCTCGTTCATCCATTGATGGTAACGTCCACGAATATTTTGCAGACCTGAAAATGCCCGCCTGCGCGGTTTCGGCGTTTCTTTGCGCGAt < 1:1468313/140‑1 (MQ=255) ctc‑tTTTTTCTCATCCAGATGCTGTGTTTTATGGCTAACGCGCTCAGGCAGCTCGTTCATCCATTGATGGTAACGTCCACGAATATTTTGCAGACCTGAAAATGCCCGCCTGCGCGGTTTCGGCGTTTCTTTGCGCGATg < 1:312240/140‑1 (MQ=255) c‑tTTTTTCTCATGCTGATGCTGTGTTTTATGGCTAACGCGCTCAGGCAGCTCGTTCATCCATTGATGGTAACGTCCACGAATATTTTGCAGACCTGAAAATGCCCGCCTGCGCGGTTTCGTCGTTTCTTTTCGCGATGCa < 2:1867061/140‑1 (MQ=255) c‑tTTTTTCTCATCCAGATGCTGTGTTTTCTGGCTAACGCGCTCAGGCAGCTCGTTCATCCATTGATGGTACCGTCCACGAATATTTTGCAGACCTGAAAATGCCCGCCTGCGCGGTTTCGGCGTTTCTTTGCGCGATGCa < 2:11027285/140‑1 (MQ=255) c‑tTTTTTCTCATCCAGATGCTGTGTTTTATGGCTAACGCGCTCAGGCAGCTCGTTCATCCATTGATGGTACCGTCCACGAATATTTTGCAGACCTGAAAATGCCCGCCTGCGCGGTTTCGGCGTTTCTTTGCGCGATGCa < 1:6850011/140‑1 (MQ=255) c‑tTTTTTCTCATCCAGATGCTGTGTTTTATGGCTAACGCGCTCAGGCAGCTCGTTCATCCATTGATGGTAACGTCCACGAATATTTTGCAGACCTGAAAATGCCCGCCTGCGCGGTTTCGGCGTTTCTTTGCGCGATGCa < 2:1024916/140‑1 (MQ=255) c‑tTTTTTCTCATCCAGATGCTGTGTTTTATGGCTAACGCGCTCAGGCAGCTCGTTCATCCATTGATGGTAACGTCCACGAATATTTTGCAGACCTGAAAATGCCCGCCTGCGCGGTTTCGGCGTTTCTTTGCGCGATGCa < 1:9362241/140‑1 (MQ=255) c‑tTTTTTCTCATCCAGATGCTGTGTTTTATGGCTAACGCGCTCAGGCAGCTCGTTCATCCATTGATGGTAACGTCCACGAATATTTTGCAGACCTGAAAATGCCCGCCTGCGCGGTTTCGGCGTTTCTTTGCGCGATGCa < 1:9951110/140‑1 (MQ=255) c‑tTTTTTCTCATCCAGATGCTGTGTTTTATGGCTAACGCGCTCAGGCAGCTCGTTCATCCATTGATGGTAACGTCCACGAATATTTTGCAGACCTGAAAATGCCCGCCTGCGCGGTTTCGGCGTTTCTTTGCGCGATGCa < 1:3937267/140‑1 (MQ=255) c‑tTTTTTCTCATCCAGATGCTGTGTTTTATGGCTAACGCGCTCAGGCAGCTCGTTCATCCATTGATGGTAACGTCCACGAATATTTTGCAGACCTGAAAATGCCCGCCTGCGCGGTTTCGGCGTTTCTTTGCGCGATGCa < 1:10331552/140‑1 (MQ=255) c‑tTTTTTCTCATCCAGATGCTGTGTTTTATGGCTAACGCGCTCAGGCAGCTCGTTCATCCATTGATGGTAACGTCCACGAATATTTTGCAGACCTGAAAATGCCCGCCTGCGCGGTTTCGGCGTTTCTTTGCGCGATGCa < 2:5083972/140‑1 (MQ=255) tttttCTCATCCAGATGCTGTGTTTTATGGCTAACGCGCTCAGGCAGCTCGTTCATCCATTGATGGTAACGTCCACGAATATTTTGCAGACCTGAAAATGCCCGCCTGCGCGGTTTCGGCGTTTCTTTGCGCGATGCAcc < 1:1249155/140‑1 (MQ=255) ttCTCCTCCAGATGCTGTGTTTGATGGCTAACGCGCTCAGGCAGCTCGTTCATCCATTGATGGTAACGTCCACGAATATTTTGCAGACCTGAAAATGCCCGCCTGCGCGGTTTCGGCGTTTCTTTGCGCGATGCACCGAt < 1:11147199/140‑1 (MQ=255) tctcATCCAGATGCTGTGTTTTATGGCTAACGCGCTCAGGCAGCTCGTTCATCCATTGATGGTAACGTCCACGAATATTTTGCAGACCTGAAAATGCCCGCCTGCGCGGTTTCGGCGTTTCTTTGCGCGATGCACCGATc < 1:1976133/140‑1 (MQ=255) ctcATCCAGATGCTGTGTTTTATGGCTAACGCGCTCAGGCAGCTCGTTCATCCATTGATGGTAACGTCCACGAATATTTTGCAGACCTGAAAATGCCCGCCTGCGCGGTTTCGGCGTTTCTTTGCGCGATGCACCGATCa < 1:10174253/140‑1 (MQ=255) ctcATCCAGATGCTGTGTTTTATGGCTAACGCGCTCAGGCAGCTCGTTCATCCATTGATGGTAACGTCCACGAATATTTTGCAGACCTGAAAATGCCCGCCTGCGCGGTTTCGGCGTTTCTTTGCGCGATGCACCGATCa < 2:5776254/140‑1 (MQ=255) ctcATCCAGATGCTGTGTTTTATGGCTAACGCGCTCAGGCAGCTCGTTCATCCATTGATGGTAACGTCCACGAATATTTTGCAGACCTGAAAATGCCCGCCTGCGCGGTTTCGGCGTTTCTTTGCGCGATGCACCGATCa < 2:2250107/140‑1 (MQ=255) tcATCCAGATGCTGTGTTTTATGGCTAACGCGCTCAGGCAGCTCGTTCATCCATTGATGGTAACGTCCACGACTATTTTGCAGACCTGAAAATGCCCGCCTGCGCGGTTTCGGCGTTTCTTTGCGCGATGCACCGATCaa < 2:692092/140‑1 (MQ=255) tCCAGATGCTGTGTTTTATGGCTAACGCGCTCAGGCAGCTCGTTCATCCATTGATGGTAACGTCCACGAATATTTTGCAGACCTGAAAATGCCCGCCTGCGCGGTTTCGGCGTTTCTTTGCGCGATGCACCGATCAATaa > 1:8767072/1‑140 (MQ=255) | GATAAACTGCGCCAGCGGGTTAAACGGCTGAGTAACGCAGATTAACGCCAGAATCAGCGAGAAGGTGACGATGATACCGAGGATCAACCGCCGCGCCCCGGCACTCAAATGACCGAGCTC‑TTTTTTCTCATCCAGATACTGTGTTTTATGGCTAACGCGCTCAGGCAGCTCGTTCATCCATTGATGGTAACGTCCACGAATATTTTGCAGACCTGAAAATGCCCGCCTGCGCGGTTTCGGCGTTTCTTTGCGCGATGCACCGATCAATAACCAG > NZ_CP025268/3695391‑3695664 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |