BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NZ_CP025268	4,509,378	A→G	intergenic (+9/+3)	CXP41_RS23345 → / ← CXP41_RS23350	transposase/IS30‑like element IS30 family transposase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NZ_CP025268	4,509,378	0	A	G	100.0%	2132.2 / NA	635	intergenic (+9/+3)	CXP41_RS23345/CXP41_RS23350	transposase/IS30‑like element IS30 family transposase
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (280/355); total (280/355)

Only 100 of 635 total aligned reads displayed.

AAACAACTGCGTGATGAGCGTCAGGGCAAAACACCAAAAGCCTCTCCGATAACACCAGAACAAATCGAAATACGTAAGCTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAAATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGTTCATGTTGAGTATATTGGGCAAGAC  >  NZ_CP025268/4509241‑4509508

 aacaacTGCGTGATGAGCGTCAGGGCAAAACACCAAAAGCCTCTCCGATAACACCAGAACAAATCGAAATACGTAAGCTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGAtt                                                                                                                                 <  1:9799764/140‑1 (MQ=255)

  acaacTGCGTGATGAGCGTCAGGGCAAAACACCAAAAGCCTCTCCGATAACACCAGAACAAATCGAAATACGTAAGCTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTc                                                                                                                                >  2:6265146/1‑140 (MQ=255)

   caacTGCGTGATGAGCGTCAGGGCAAAACACCAAAAGCCTCTCCGATAACACCAGAACAAATCGAAATACGTAAGCTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCa                                                                                                                               <  2:4297101/140‑1 (MQ=255)

    cacTGCGTGCAGAGCCTCACCGCAACACACCAAAAGCCTCTCCGATAACACCCGAACAAATCGAAATACGTAAGCTGAGGAAACAGCTACAACGGATTGAAATGGAGAATGAAAGATGAACAAGGCTACTGTAGATTcca                                                                                                                              <  2:9720679/139‑3 (MQ=255)

    aacTGCGTGATGAGCGTCAGGGCAAAACACCAAACGCCTCTCCGATAACACCAGAACAACTCGAAAGACGTAAGCTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCaa                                                                                                                              <  2:242788/140‑1 (MQ=255)

     acTGCGTGATGAGCGTCAGGGCAAAACACCAAAAGCCTCTCCGATAACACCAGAACAAATCGAAATACGTAAGCTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAAt                                                                                                                             <  2:221438/140‑1 (MQ=255)

     acTGCGTGATGAGCGTCAGGGCAAAACACCAAAAGCCTCTCCGATAACACCAGAACAAATCGAAATACGTAAGCTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAAt                                                                                                                             <  2:2044317/140‑1 (MQ=255)

      cTGCGTGATGAGCGTCAGGGCAAAACACCAAAAGCCTCTCCGATAACACCAGAACAAATCGAAATACGTAAGCTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATc                                                                                                                            >  2:764652/1‑140 (MQ=255)

       tGCGTGATGAGCGTCAGGGCAAAACACCAAAAGCCTCTCCGATAACACCAGAACAAATCGAAATACGTAAGCTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCt                                                                                                                           >  1:360295/1‑140 (MQ=255)

        gCGTGATGAGCGTCAGGGCAAAACACCAAAAGCCTCTCCGATAACACCAGAACAAATCGAAATACGTAAGCTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTg                                                                                                                          >  1:7291901/1‑140 (MQ=255)

        gCGTGATGAGCGTCAGGGCAAAACACCAAAAGCCTCTCCGATAACACCAGAACAAATCGAAATACGTAAGCTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTg                                                                                                                          >  1:928128/1‑140 (MQ=255)

        gCGTGATGAGCGTCAGGGCAAAACACCAAAAGCCTCTCCGATAACACCAGAACAAATCGAAATACGTAAGCTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTg                                                                                                                          >  1:5020772/1‑140 (MQ=255)

          gTGATGAGCGTCAGGGCAAAACACCAAAAGCCTCTCCGATAACACCAGACCAAATCGAAATACGTAAGCTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTc                                                                                                                        <  1:4021293/140‑1 (MQ=255)

           tgatgaGCGTCAGGCCAAAACACCAAACGCCTCTCCGATAACACCAGAACAAATCGAAATACGTAAGCTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCa                                                                                                                       <  1:6094589/140‑1 (MQ=255)

            gatgaGCGTCAGGGCAAAACACCAAAAGCCTCTCCGATAACACCAGAACAAATCGAAATACGTAAGCTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCaa                                                                                                                      <  1:6847394/140‑1 (MQ=255)

            gatgaGCGTCAGGGCAAAACACCAAAAGCCTCTCCGATAACACCAGAACAAACCGAAATACGTACGCTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCaa                                                                                                                      <  1:8610278/140‑1 (MQ=255)

                  cGTCAGGGCAAAACACCAAAAGCCTCTCCGATAACACCAGAACAAATCGAAATACGTAAGCTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAac                                                                                                                <  1:3203452/140‑1 (MQ=255)

                   gTCAGGGCAAAACACCAAAAGCCTCTCCGATAACACCAGAACACATCGAAATACGTAAGCTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAaca                                                                                                               <  1:5466183/140‑1 (MQ=255)

                   gTCAGGGCAAAACACCAAAAGCCTCTCCGATAACACCAGAACAAATCGAAATACGTAAGCTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAaca                                                                                                               <  1:10996368/140‑1 (MQ=255)

                   gTCAGGGCAAAACACCAAAAGCCTCTCCGATAACACCAGAACAAATCGAAATACGTAAGCTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAaca                                                                                                               <  2:10742909/140‑1 (MQ=255)

                   gTCAGGGCAAAACACCAAAAGCCTCTCCGATAACACCAGAACAAATCGAAATACGTAAGCTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAaca                                                                                                               <  1:5336176/140‑1 (MQ=255)

                     cAGGGCAAAACACCAAAAGCCTCTCCGATAACACCAGAACAAATCGAAATACGTAAGCTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACAcc                                                                                                             <  2:7965408/140‑1 (MQ=255)

                        ggCAAAACACCAAAAGCCTCTCCGATAACACCAGAACAAATCGAAATACGTAAGCTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCt                                                                                                          >  1:7720803/1‑140 (MQ=255)

                         gCAAAACACCAAAAGCCTCTCCGATAACACCAGAACAAATCGAAATACGTAAGCTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCtt                                                                                                         <  2:8859385/140‑1 (MQ=255)

                               cacCAAAAGCCTCTCCGATAACACCAGAACAAATCGAAATACGTAAGCTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAAtt                                                                                                   <  1:810062/140‑1 (MQ=255)

                               cacCAAAAGCCTCTCCGATAACACCAGAACAAATCGAAATACGTAAGCTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAAtt                                                                                                   <  1:8796374/140‑1 (MQ=255)

                                 ccAAAAGCCTCTCCGATAACACCAGAACAAATCGAAATACGTAAGCTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTAt                                                                                                 <  1:2557009/140‑1 (MQ=255)

                                  cAAAAGCCTCTCCGATAACACCAGAACAAATCGAAATACGTAAGCTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTAtc                                                                                                >  2:10052959/1‑140 (MQ=255)

                                         ctctCCGATAACACCAGAACAAATCGAAATACGTAAGCTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCg                                                                                         <  2:52064/140‑1 (MQ=255)

                                         ctcgCCGATAACACCAGAACAAATCGAAATACCTAAGCTGAGGAAAAAGCTACAACTGATTGAAATGGAGAATGAAAGATTAACAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCg                                                                                         <  2:6088985/140‑1 (MQ=25)

                                            tcCGATAACACCAGAACAAATCGAAATACGTAAGCTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTTTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGgtg                                                                                      >  2:9551031/1‑140 (MQ=255)

                                            tcCGATAACACCAGAACAAATCGAAATACGTAAGCTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAAGCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGgtg                                                                                      >  2:1767357/1‑140 (MQ=255)

                                                aTAACACCAGAACAAATCGAAATACGTAAGCTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGtttt                                                                                  >  1:2732826/1‑140 (MQ=255)

                                                aTAACACCAGAACAAATCGAAATACGTAAGCTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGtttt                                                                                  >  1:3404959/1‑140 (MQ=255)

                                                      ccAGAACAAATCGAAATACGTAAGCTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAATGGCTACTGTAGATTCAATCTGTCAATGCCACACCCCTTTCTATTATCTATTTGGGTGTTTTGAACtg                                                                            >  2:6913192/1‑139 (MQ=37)

                                                      ccAGAACAAATCGAAATACGTAAGCTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACtt                                                                            >  2:10398068/1‑140 (MQ=255)

                                                       cAGAACAAATCGAAATACGTAAGCTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACGCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTc                                                                           >  1:8238842/1‑140 (MQ=255)

                                                        aGAACAAATCGAAATACGTAAGCTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCa                                                                          <  2:5402272/140‑1 (MQ=255)

                                                        aGAACAAAACGAAATACGTAAGCTGAGGAAAAAGCTACAACGGAATGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCa                                                                          <  2:8158346/140‑1 (MQ=255)

                                                         gAACAAATCGAAATACGTAAGCTGAGGAAAAAGCTACAACGGATTGAAATGGAGTATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAg                                                                         <  2:4995113/140‑1 (MQ=255)

                                                         gAACAAATCGAAATACGTAAGCTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAg                                                                         >  1:7540606/1‑140 (MQ=255)

                                                         gAACAAATCGAAATACGTAAGCTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAg                                                                         >  1:4734252/1‑140 (MQ=255)

                                                            cAAATCGAAATACGTAAGCTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAgtgt                                                                      <  1:10588474/140‑1 (MQ=255)

                                                              aaTCGAAATACGTAAGCTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCTGTGTCt                                                                    >  1:7937318/1‑140 (MQ=255)

                                                               aTCGAAATACGTAAGCTGAGGAAAAAGCTACAACTGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTGtt                                                                   >  2:7517432/1‑140 (MQ=255)

                                                               aTCGAAATACGTAAGCTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACAcccc                                                                                                           <  2:557759/100‑1 (MQ=255)

                                                               aTCGAAATACGTAAGCTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAgt                                                                        <  2:3068994/135‑1 (MQ=255)

                                                               aTCGAAATACGTAAGCTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCtt                                                                   >  1:5643441/1‑140 (MQ=255)

                                                               aTCGAAATACGTAAGCTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGATACGGTAGATTCAATCTGGCAAGGCAACTCCCCTTTCAATTATCTCTTTAGGTGTTTTGAACTTCAGTGTCtt                                                                   >  2:7351937/1‑140 (MQ=25)

                                                                  gAAATACGTAAGCTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTtct                                                                <  2:3943433/140‑1 (MQ=255)

                                                                    aaTACGTAAGCTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCg                                                              <  2:847532/140‑1 (MQ=255)

                                                                    aaTACGTAAGCTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCg                                                              <  1:9078822/140‑1 (MQ=255)

                                                                       aCGTAAGCTGAGGAAACAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTc                                                           <  1:10842240/140‑1 (MQ=255)

                                                                       aCGTAAGCTGAGGAAAAAGCTACTACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATGCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTc                                                           <  2:2643445/140‑1 (MQ=255)

                                                                       aCGTAAGCTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTc                                                           <  2:10504503/140‑1 (MQ=255)

                                                                            aGCTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCtgttg                                                      <  2:8609118/140‑1 (MQ=255)

                                                                              cTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTgttgtt                                                    <  1:232061/140‑1 (MQ=255)

                                                                                 aGGAAAAAGCTACAACTGATTGAAATGGAGAATCAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATGATCTCTTTCGGTGTTTTGATCTTCAGTGTCTTTCTCGGTCTGTTGTTTAg                                                 <  2:4175478/140‑1 (MQ=18)

                                                                                 aGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCCATGCAACACCCCTTTCAATTATCTCTTTCGGTGTGTTGAACTTAAGTGTCTTTGTCGGTGTGTTGTTGAg                                                 >  1:10111284/1‑140 (MQ=21)

                                                                                 aGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAg                                                 >  2:4559032/1‑140 (MQ=255)

                                                                                 aGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAg                                                 >  2:10880127/1‑140 (MQ=255)

                                                                                 aGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAg                                                 >  1:4641842/1‑140 (MQ=255)

                                                                                 aGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAg                                                 >  1:5862586/1‑140 (MQ=255)

                                                                                  ggAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAACAAGGCTACTGTAGATTCAAACTGTCAATGCACCACCCCTTTCAATTATCTCTTTCGGTGTTGTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGc                                                <  2:3740583/140‑1 (MQ=21)

                                                                                  ggAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGc                                                >  2:930813/1‑140 (MQ=255)

                                                                                        aGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGagct                                          >  1:7374721/1‑139 (MQ=255)

                                                                                        aGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGagca                                          <  2:827910/140‑1 (MQ=255)

                                                                                         gCTACAACGGATTGAAATGGAGAAAGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGagcag                                         <  1:957516/140‑1 (MQ=255)

                                                                                           tACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAgcagca                                       >  1:2097451/1‑140 (MQ=255)

                                                                                             ccaCGGATTGAAATGGAGAATGCAAGACTAACCAGGCTACTGTAGATTCAATCTGTCACTGCAACACCCCCTTCAATAATCTCTTGCGGTGTTTTGAACTTCAGTGTCGTGCTCGGACTGTTGATTAGCTGAGCAGCAAc                                     <  2:5858316/138‑1 (MQ=14)

                                                                                             cAACGGATTGAAATGGAGAATGAAATATTACAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAAc                                     <  2:4677576/140‑1 (MQ=255)

                                                                                             cAAAGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCTACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGATGAGCAGCAAc                                     <  2:2859187/140‑1 (MQ=255)

                                                                                                  gATTGAACTGGAGAATGAAATATTAACAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGAt                                <  1:1202132/140‑1 (MQ=255)

                                                                                                  gATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGAt                                <  1:10002770/140‑1 (MQ=255)

                                                                                                  gATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGAt                                <  1:4826900/140‑1 (MQ=255)

                                                                                                  gATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGAt                                <  1:64304/140‑1 (MQ=255)

                                                                                                  gATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGAt                                <  2:3463330/140‑1 (MQ=255)

                                                                                                  gATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGAt                                <  1:1025895/140‑1 (MQ=255)

                                                                                                  gATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGAt                                >  2:1587392/1‑140 (MQ=255)

                                                                                                   aTTGAAATGGAGAATGAATGAGTAAAATGGCGACTGTAGATTCAATCTGTCAATGCAACACCCCTTGCAATGATCTCTGTCGGGGTTTTGAACTTCAGTGTCTGTCTCGGTCTGTGGTTTAGCTGAGCAGCGCCCAGATc                               >  2:136484/1‑140 (MQ=14)

                                                                                                   aTTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATc                               >  2:4407873/1‑140 (MQ=255)

                                                                                                   aTTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATc                               >  1:1728529/1‑140 (MQ=255)

                                                                                                   aTTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATc                               >  1:1585228/1‑140 (MQ=255)

                                                                                                   aTTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATc                               >  2:3646055/1‑140 (MQ=255)

                                                                                                       aaaTGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAAGTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGt                           >  2:7794171/1‑140 (MQ=255)

                                                                                                       aaaTGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTCCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGt                           >  2:10185389/1‑140 (MQ=255)

                                                                                                         aTGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGTTc                         <  2:6558909/140‑1 (MQ=255)

                                                                                                         aTGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGTTc                         <  1:2866565/140‑1 (MQ=255)

                                                                                                           ggAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCACTTTCATTTATCTCTTTCTGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGTTCAt                       <  2:11200004/140‑1 (MQ=255)

                                                                                                            gagaATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGTTCATg                      <  1:1355310/140‑1 (MQ=255)

                                                                                                              gaATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGTTCATGtt                    <  2:1834146/140‑1 (MQ=255)

                                                                                                               aaTGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCGTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGTTGATGTTg                   >  1:6721418/1‑140 (MQ=255)

                                                                                                                aTGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGTTCATGTTGa                  <  1:4272064/140‑1 (MQ=255)

                                                                                                                aTGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGTTCATGTTGa                  <  1:8515787/140‑1 (MQ=255)

                                                                                                                 tGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGTTCATGTTGAg                 >  1:11277449/1‑140 (MQ=255)

                                                                                                                     atatTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGTTCATGTTGAGtata             <  1:6269588/140‑1 (MQ=255)

                                                                                                                     atatTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGTTCATGTTGAGtata             <  1:710927/140‑1 (MQ=255)

                                                                                                                      tatTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGTTCATGTTGAGTatat            <  1:1105964/140‑1 (MQ=38)

                                                                                                                       atTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGATGATCAGCAACCAGATCTAGTTCATGTTGAGTATAtt           >  2:3265353/1‑140 (MQ=255)

                                                                                                                          aaaaaGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGGGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGTTCATGTTGAGTATATTggg        >  1:3837123/1‑140 (MQ=21)

AAACAACTGCGTGATGAGCGTCAGGGCAAAACACCAAAAGCCTCTCCGATAACACCAGAACAAATCGAAATACGTAAGCTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAAATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGTTCATGTTGAGTATATTGGGCAAGAC  >  NZ_CP025268/4509241‑4509508

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`