Predicted mutation
evidence seq id position mutation annotation gene description
RA NZ_CP025268 4,270,410 (T)8→7 intergenic (+181/+322) tyrB → / ← CXP41_RS22090 aromatic amino acid transaminase/protein YjbS

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NZ_CP0252684,270,4030T.82.2% 793.3 / 214.6 271intergenic (+174/+329)tyrB/CXP41_RS22090aromatic amino acid transaminase/protein YjbS
Reads supporting (aligned to +/- strand):  ref base T (14/34);  new base . (61/161);  total (75/196)
Fisher's exact test for biased strand distribution p-value = 8.59e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.10e-01

Only 100 of 277 total aligned reads displayed.

AATTAAACTGTCGTCGCTTTCACTCTTTCTTTATAGATGATTTTTTTGATGCCATCGTTCTACGTGAGAGATAATAAACGTTGTTAGTTCTTTTATTGTTAAGCTTATCCCAATTATCTGGAATTCCTTATCCTGTTTTTTTTGGGTGGAGTAATAATTTCTGCACATCTAACCATTATTAAATTTAATAATAAGTATCGGGTTTGTTACGATAGAATATTTCTATATCCTCAAGAATATGCTTTGCCTTATTGCCTGTGACTTTCTGAGA  >  NZ_CP025268/4270268‑4270538
                                                                                                                                       |                                                                                                                                       
   tAAACTGTCGTCGCTTTCACTCTTTCTTTATAGATGATTTTTTTGATGCCATCGTTCTACGTGAGAGATAATAAACGTTGTTAGTTCTTTTATTGTTAAGCTTATCCCAATTATCTGGAATTCCTTATCCTGtttttttg                                                                                                                                  <  2:2853510/140‑2 (MQ=255)
     aacgctcgtcgCTTTCACTCTTTCTATATAGATGATTTTTTTGATGCCATCGTTCTACGTGAGAGATAATAAACGTTGTTAGTTCTTTTATTGTTAAGCTTATCCCAATTATCTGGAATTCCTTATCCTGTTTTTTTggg                                                                                                                                <  1:10362430/135‑1 (MQ=255)
     aaCTGTCGTCGCTTTCACTCTTTCTTTATAGATGATTTTTTTGATGCCATCGTTCTACGTGAGAGATAATAAACGTTGTTAGTTCTTTTATTGTTAAGCTTGTCCCAATTATCTGGAATTCCTTATCCTGTTTTTTTggg                                                                                                                                <  1:4817501/140‑1 (MQ=255)
     aaCTGTCGTCGCTTTCACTCTTTCTTTATAGATGATTTTTTTGATGCCATCGTTCTACGTGAGAGATAATAAACGTTGTTAGTTCTTTTATTGTTAAGCTTATCCCAATTATCTGGAATTCCTTATCCTGTTTTTTTggg                                                                                                                                <  1:9546653/140‑1 (MQ=255)
     aaCTGTCGTCGCTTTCACTCTTTCTTTATAGATGATTTTTTTGATGCCATCGTTCTACGTGAGAGATAATAAACGTTGTTAGTTCTTTTATTGTTAAGCTTATCCCAATTATCTGGAATTCCTTATCCTGTTTTTTTggg                                                                                                                                <  2:3236382/140‑1 (MQ=255)
     aaCTGTCGTCGCTTTCACTCTTTCTTTATAGATGATTTTTTTGATGCCATCGTTCTACGTGAGAGATAATAAACGTTGTTAGTTCTTTTATTGTTAAGCTTATCCCAATTATCTGGAATTCCTTATCCTGTTTTTTTggg                                                                                                                                <  1:466336/140‑1 (MQ=255)
     aaCTGTCGTCGCTTTCACTCTTTCTTTATAGATGATTTTTTTGATGCCATCGTTCTACGTGAGAGATAATAAACGTTGTTAGTTCTTTTATTGTTAAGCTTATCCCAATTATCTGGAATTCCTTATCCTGTTTTTTTggg                                                                                                                                <  1:7279877/140‑1 (MQ=255)
     aaCTGTCGTCGCTTTCACTCTTTCTTTATAGATGATTTTTTTGATGCCATCGTTCTACGTGAGAGATAATAAACGTTGTTAGTTCTTTTATTGTTAAGCTTATCCCAATTATCTGGAATTCCTTATCCTGTTTTTTTggg                                                                                                                                <  1:2296924/140‑1 (MQ=255)
     aaCTGTCGTCGCTTTCACTCTTTCTTTATAGATGATTTTTTTGATGCCATCGTTCTACGTGAGAGATAATAAACGTTGTTAGTTCTTTTATTGTTAAGCTTATCCCAATTATCTGGAATTCCTTATCCTGTTTTTTTggg                                                                                                                                <  1:2148570/140‑1 (MQ=255)
     aaCTGTCGTCGCTTTCACTCTTTCTTTATAGATGATTTTTTTGATGCCATCGTTCTACGTGAGAGATAATAAACGTTGTTAGTTCTTTTATTGTTAAGCTTATCCCAATTATCTGGAATTCCTTATCCTGTTTTTTTggg                                                                                                                                <  2:10033783/140‑1 (MQ=255)
     aaCTGTCGTCGCTTTCACTCTTTCTTTATAGATGATTTTTTTGATGCCATCGTTCTACGTGAGAGATAATAAACGTTGTTAGTTCTTTTATTGTTAAGCTTATCCCAATTATCTGGAATTCCTTATCCTGTTTTTTTggg                                                                                                                                <  1:9666865/140‑1 (MQ=255)
     aaCTGTCGTCGCTTTCACTCTTTCTTTATAGATGATTTTTTTGATGCCATCGTTCTACGTGAGAGATAATAAACGTTGTTAGTTCTTTTATTGTTAAGCTTATCCCAATTATCTGGAATTCCGTATCCTGTTTTTTTggg                                                                                                                                <  1:271389/140‑1 (MQ=255)
     aaCTGTCGTCGCTTTCACTCTTTCTATATAGATGATTTTTTTGATGCCATCGTTCTACGTGAGAGATAATAAACGTTGTTAGTTCTTTTATTGTTAAGCTTATCCCAAGTATCTGGAATTCCTTATCCTGTTTTTTTggg                                                                                                                                <  1:6683150/140‑1 (MQ=255)
       cTGTCGTCGCTTTCACTCTTTCTTTATAGATGATTTTTTTGATGCCATCGTTCTACGTGAGAGATAATAAACGTTGTTAGTTCTTTTATTGTTAAGCTTATCCCAATTATCTGGAATTCCTTATCCTGTTTTTTTGGGTg                                                                                                                             <  1:3238392/140‑1 (MQ=255)
         gtcgtcGCTTTCACTCTTTCTTTATAGATGATTTTTTTGATGCCATCGTTCTACGTGAGAGATAATAAACGTTGTTAGTTCTTTTATTGTTAAGCTTATCCCAATTATCTGGAATTCCTTATCCTGTTTTTTTGGGTGGa                                                                                                                           <  1:1826746/140‑1 (MQ=255)
         gtcgtcGCTTTCACTCTTTCTTTATAGATGATTTTTTTGATGCCATCGTTCTACGTGAGAGATAATAAACGTTGTTAGTTCTTTTATTGTTAAGCTTATCCCAATTATCTGGAATTCCTTATCCTGTTTTTTTGGGTGGa                                                                                                                           >  1:11074004/1‑140 (MQ=255)
          tcgtcgCTTTCACTCTTTCTTTATAGATGATTTTTTTGATGCCATCGTTCTACGTGAGAGATAATAAACGTTGTTAGTTCTTTTATTGTTAAGCTTATCCCAATTATCTGGAATTCCTTATCCTGTTTTTTTggg                                                                                                                                <  1:10423935/135‑1 (MQ=255)
          tcgtcgCTTTCACTCTTTCTTTATAGATGATTTTTTTGATGCCATCGTTCTACGTGAGAGATAATAAACGTTGTTAGTTCTTTTATTGTTAAGCTTATCCCAATTATCTGGAATTCCTTATCCTGTTTTTTTggg                                                                                                                                >  2:3545559/1‑135 (MQ=255)
          tcgtcgCTTTCACTCTTTCTTTATAGATGATTTTTTTGATGCCATCGTTCTACGTGAGAGATAATAAACGTTGTTAGTTCTTTTATTGTTAAGCTTATCCCAATTATCTGGAATTCCTTATCCTGTTTTTTTggg                                                                                                                                >  2:10423934/1‑135 (MQ=255)
           cgtcgCTTTCACTCTTTCTTTATAGATGATTTTTTTTATGCCATCGTTCTACGTGAGAGATAATAAACGTTGTTAGTTCTTTTATTGTTAAGCTTATCCCAATTATCTGGAATTCCTTATCCTGTTTTTTTGGGTGGAGt                                                                                                                         >  1:5214736/1‑140 (MQ=255)
           cgtcgCTTTCACTCTTTCTTTATAGATGATTTTTTTGATGCCATCGTTCTACGTGAGAGATAATAAACGTTGTTAGTTCTTTTATTGTTAAGCTTATCCCAATTATCTGGAATTCCTTATCCTGTTTTTTTggg                                                                                                                                <  1:11288152/134‑1 (MQ=255)
           cgtcgCTTTCACTCTTTCTTTATAGATGATTTTTTTGATGCCATCGTTCTACGTGAGAGATAATAAACGTTGTTAGTTCTTTTATTGTTAAGCTTATCCCAATTATCTGGAATTCCTTATCCTGTTTTTTTggg                                                                                                                                >  2:11288151/1‑134 (MQ=255)
              cgCTTTCTCTCTTTCTTTATAGATGATTTTTTTGTTGCCCTCGTTCTACGTGAGAGATAATAAACGTTGTGAGTTCTTTTATTGTTACGCTTATCCCAATGTTCTGGAATTCCTTATCCTGTTTTTTTGGGTGGAGtaat                                                                                                                      <  2:8787036/140‑1 (MQ=255)
              cgCTTTCACTCTTTCTTTATAGATGATTTTTTTGATGCCATCGTTCTACGTGAGAGATAATAAACGTTGTTAGTTCTTTTATTGTTAAGCTTATCCCAATTATCTGGAATTCCTTATCCTGTTTTTTTGGGTGGAGtaat                                                                                                                      <  2:11074003/140‑1 (MQ=255)
              cgCTTTCACTCTTTCTTTATAGATGATTTTTTTGATGCCATCGTTCTACGTGAGAGATAATAAACGTTGTTAGTTCTTTTATTGTTAAGCTTATCCCAATTATCTGGAATTCCTTATCCTGTTTTTTTGGGTGGAGtaat                                                                                                                      <  2:11305773/140‑1 (MQ=255)
              cgCTTTCACTCTTTCTTTATAGATGATTTTTTTGATGCCATCGTTCTACGTGAGAGATAATAAACGTTGTTAGTTCTTTTATTGTTAAGCTTATCCCAAGTATCTGGAATTCCTTATCCTGTTTTTTTGGGTGGAGtaat                                                                                                                      <  2:6909496/140‑1 (MQ=255)
                 tttCACTCTTTCTTTATAGATGATTTTTTTGATGCCATCGTTCTACGTGAGAGATAATAAACGTTGTTAGTTCTTTTATTGTTAAGCTTATCCCAATTATCTGGAATTCCTTATCCTGTTTTTTTGGGTGGAGTaataat                                                                                                                   <  1:10818369/140‑1 (MQ=255)
                 tttCACACTTACTTTATAGATGATTTTTTTGATGCCATCGTTCTACGTGAGAGATAATAAACGTTGTTAGTTCTTTTATTGTTAAGCTTATCCCAATTATCTGGAATTCCTTATCCTGTTTTTTTGGGTGGAGTaataat                                                                                                                   <  1:4109720/140‑1 (MQ=255)
                      ctctTTCTTTCTAGATGATTTTTTTGATGCCATCGTTCTACGTGAGAGATAATAAACGTTGTTAGTTCTTTTATTGTTAAGCTTATCCCAATTATCTGGAATTCCTTATCCTGTTTTTTTGGGTGGAGTAATAATTTCTg                                                                                                              <  2:10105344/140‑1 (MQ=255)
                      ctctTTCTTTATAGATGATTTTTTTGATGCCATCGTTCTACGTGAGAGATAATAAACGTTGTTAGTTCTTTTATTGTTAAGCTTATCCCAATTCTCTGGAATTCCTTATCCTGTTTTTTTGGGTGGAGTAATAATTTCTg                                                                                                              <  1:1063932/140‑1 (MQ=255)
                      ctctTTCTTTATAGATGATTTTTTTGATGCCATCGTTCTACGTGAGAGATAATAAACGTTGTTAGTTCTTTTATTGTTAAGCTTATCCCAATTATCTGGAATTCCTTATCCTGTTTTTTTGGGTGGAGTAATAATTTCTg                                                                                                              <  2:1414324/140‑1 (MQ=255)
                      ctctTTCTTTATAGATGATTTTTTTGATGCCATCGTTCTACGTGAGAGATAATAAACGTTGTTAGTTCTTTTATTGTTAAGCTTATCCCAATTATCTGGAATTCCTTATCCTGTTTTTTTGGGTGGAGTAATAATTTCTg                                                                                                              <  1:9420462/140‑1 (MQ=255)
                      ctctTTCTTTATAGATGATTTTTTTGATGCCATCGTTCTACGTGAGAGATAATAAACGTTGTTAGTTCTTTTATTGTTAAGCTTATCCCAATTATCTGGAATTCCTTATCCTGTTTTTTTGGGTGGAGTAATAATTTCTg                                                                                                              <  2:2774420/140‑1 (MQ=255)
                      ctctTTCTTTATAGATGATTTTTTTGATGCCATCGTTCTACGTGAGAGATAATAAACGTTGTTAGTTCTTTTATTGTTAAGCTTATCCCAATTATCTGGAATTCCTTATCCTGTTTTTTTGGGTGGAGTAATAATTTCTg                                                                                                              <  1:5905480/140‑1 (MQ=255)
                      ctctTTCTTTATAGATGATTTTTTTGATGCCATCGTTCTACGTGAGAGATAATAAACGTTGTTAGTTCTTTTATTGTTAAGCTTATCCCAATTATCTGGAATTCCTTATCCTGTTTTTTTGGGTGGAGTAATAATTTCTg                                                                                                              <  1:500508/140‑1 (MQ=255)
                      ctctTTCTTTATAGATGATTTTTTTGATGCCATCGTTCTACGTGAGAGATAATAAACGTTGTTAGTTCTTTTATTGTTAAGCTTATCCCAATTATCTGGAATTCCTTATCCTGTTTTTTTGGGTGGAGTAATAATTTCTg                                                                                                              <  2:3471092/140‑1 (MQ=255)
                      ctctTTCTTTATAGATGATTTTTTTGATGCCATCGTTCTACGTGAGAGATAATAAACGTTGTTAGTTCTTTTATTGTTAAGCTTATCCCAATTATCTGGAATTCCTTATCCTGTTTTTTTGGGTGGAGTAATAATTTCTg                                                                                                              <  2:5694239/140‑1 (MQ=255)
                      ctctTTCTTTATAGATGATTTTTTTGATGCCATCGTTCTACGTGAGAGATAATAAACGTTGTTAGTTCTTTTATTGTTAAGCTTATCCCAATTATCTGGAATTCCTTATCCTGTTTTTTTGGGTGGAGTAATAATTTCTg                                                                                                              <  2:711586/140‑1 (MQ=255)
                      ctctTTCTTTATAGATGATTTTTTTGATGCCATCGTTCTACGTGAGAGATAATAAACGTTGTTAGTTCTTTTATTGTTAAGCTTATCCCAATTATCTGGAATTCCTTATCCTGTTTTTTTGGGTGGAGTAATAATTTCTg                                                                                                              <  2:7860469/140‑1 (MQ=255)
                      ctctTTCTTTATAGATGATTTTTTTGATGCCATCGTTCTACGTGAGAGATAATAAACGTTGTTAGTTCTTTTATTGTTAAGCTTATCCCAATTATCTGGAATTCCTTATCCTGTTTTTTTGGGTGGAGTAATAATTTCTg                                                                                                              <  2:8544372/140‑1 (MQ=255)
                      ctctTTCTTTATAGATGATTTTTTTGATGCCATCGTTCTACGTGAGAGATAATAAACGTTGTTAGTTCTTTTATTGTTAAGCTTATCCCAATTATCTGGAATTCCTTATCCTGTTTTTTTGGGTGGAGTAATAATTTCTg                                                                                                              <  2:985032/140‑1 (MQ=255)
                      ctctTTCTTTATAGATGATTTTTTTGATGCCAGCGTTCTACGTGAGAGATAATAAACGTTGTTAGTTCTTTTATTGTTAAGCTTATCCCAATTATCTGGAATTCCTTATCCTGTTTTTTTGGGTGGAGTAATAATTTCTg                                                                                                              <  2:3676355/140‑1 (MQ=255)
                      ctctTTCTGTCTATATGCTCTTGTAGCTGACATCGTTCTACGTGATCGATACTACACGGGGTTACTTCCTTTCTTGTCACGCTCAGCCCAATTATCGTGACGTCCGGAGCCGGTTTTTTTGGGTGGAGTAATAATTTCTg                                                                                                              <  2:2161870/140‑1 (MQ=255)
                      ctctTTATTTATAGATGATTTTTTTGATGCCATCGTTCTAAGTGAGAGATAATAAACGTTGTTAGTTCTTTTATTGTTAAGCTTATCCCAATTATCTGGAATTCCTTATCCTGTTTTTTTGGGTGGAGTAATAATTTCTg                                                                                                              <  2:6795941/140‑1 (MQ=255)
                       tctttcttTCTAGTTGATTTTTTTGATGCCATCGTTCTACGTGAGAGATAATAAACGTTGTTAGTTCTTTTTTTGTTAAGCTTATCCCAATTATCTGGAATTCCTTATCCTGTTTTTTTGGGTGGCGTAATAATTTCTGc                                                                                                             <  2:7266955/140‑1 (MQ=255)
                       tctttcttTATAGATGATTTTTTTGATGCCATCGTTCTACGTGAGAGATAATAAACGTTGTTAGTTCTTTTATTGTTAAGCTTATCCCAATTATCTGGAATTCCGTATCCTGTTTTTTTGGGTGGAGTAATAATTTCTGc                                                                                                             <  1:9868394/140‑1 (MQ=255)
                            ctttATAGATGATTTTTTTGATGCCATCGTTCTACGTGAGAGATAATAAACGTTGTTAGTTCTTTTATTGTTAAGCTTATCCCAATTATCTGGAATTCCTTATCCTGTTTTTTTGGGTGGAGTAATAATTTCTGca                                                                                                            <  2:9528354/136‑1 (MQ=255)
                             tttATAGATGATTTTTTTGATGCCATCGTTCTACGTGAGAGATAATAAACGTTGTTAGTTCTTTTATTGTTAAGCTTATCCCAAGTATCTGGAATTCCTTATCCTGTTTTTTTGGGTGGAGTAATAATTTCTGCACATCt                                                                                                       <  1:6172127/140‑1 (MQ=255)
                             tttATAGATGATTTTTTTGATGCCATAGTTCTACGTGAGAGATAATAAACGTTGTTAGTTCTTTTATTGTTAATCTTATCCCAATTATCTGGAATTCCTTATCCTGTTTTTTTGGGTGGAGTAATAATTTCTGCACATCt                                                                                                       <  2:10809735/140‑1 (MQ=255)
                                ataGATGATTTTTTTGATGCCATCGTTCTACGTGAGAGATAATAAACGTTGTTAGTTCTTTTATTGTTAAGCTTATCCCAATTATCTGGAATTCCTTATCCTGTTTTTTTGGGTGGAGTAATAATTTCTGCACATCTAAc                                                                                                    <  2:6417056/140‑1 (MQ=255)
                                ataGATGATTTTTTTGATGCCATCGTTCTACGTGAGAGATAATAAACGTTGTTAGTTCTTTTATTGTTAAGCTTATCCCAATTATCTGGAATTCCTTATCCTGTTTTTTTGGGTGGAGTAATAATTTCTGCACATCTAAc                                                                                                    <  2:9280148/140‑1 (MQ=255)
                                ataGATGATTATTTTGATGCCATCGTTCTACGTGAGAGATAATAAACGTTGTTAGTTCTTTTATTGTTAAGCTTATCCCAATTATCTGGAATTCCTTATCCTGTTTTTTTGGGTGGAGTAATAATTTCTGCACATCTAAc                                                                                                    <  1:10033775/140‑1 (MQ=255)
                                 taGATGATTTTTTTGATGCCATCGTTCTACGTGAGAGATAATAAACGTTGTTAGTTCTTTTATTGTTAAGCTTATCCCAATTATCTGGAATTCCTTATCCTGTTTTTTTGGGTGGAGTAATAATTTCTGCACATCTAAcc                                                                                                   >  1:8681592/1‑140 (MQ=255)
                                   gatgatTTTTTTGATGCCATCGTTCTACGTGAGAGATAATAAACGTTGTTAGTTCTTTTATTGTTAAGCTTATCCCAATTATCTGGAATTCCTTATCCTGTTTTTTTGGGTGGAGTAATAATTTCTGca                                                                                                            >  1:4330034/1‑129 (MQ=255)
                                   gatgatTTTTTTGATGCCATCGTTCTACGTGAGAGATAATAAACGTTGTTAGTTCTTTTATTGTTAAGCTTATCCCAATTATCTGGAATTCCTTATCCTGTTTTTTTGGGTGGAGTAATAATTTCTGca                                                                                                            <  2:4330033/129‑1 (MQ=255)
                                   gatgatTTTTTTGATGCCATCGTTCTACGTGAGAGATAATAAACGTTGTTAGTTCTTTTATTGTTAAGCTTATCCCAATTATCTGGAATTCCTTATCCTGTTTTTTTGGGTGGAGTAATAATTTCTGCACAt                                                                                                         >  2:7416547/1‑132 (MQ=255)
                                       atTTTTTTGATGCCATCGTTCTACGTGAGAGATAATAAACGTTGTTAGTTCTTTTATTGTTAAGCTTATCCCAATTATCTGGAATTCCTTATCCTGTTTTTTTGGGTGGAGTAATAATTTCTg                                                                                                              <  1:927105/123‑1 (MQ=255)
                                           ttttGATGCCATCGTTCTACGTGAGAGATAATAAACGTTGTTAGTTCTTTTATTGTTAAGCTTATCCCAATTATCTGGAATTCCTTATCCTGTTTTTTTGGGTGGAGTAATAATTTCTGCACATCTAACCATTATTAAAt                                                                                         >  2:4503949/1‑140 (MQ=255)
                                                  gCCATCGTTCTACGTGAGAGATAATAAACGTTGTTAGTTCTTTTATTGTTAAGCTTATCCCAATTATCTGGAATTCCTTATCCTGTTTTTTTGGGTGGAGTAATAATTTCTGCACATCTAACCATTATTAAATTtaataa                                                                                  <  2:10798983/140‑1 (MQ=255)
                                                   ccATCGTTCTACGTGAGAGATAATAAACGTTGTTAGTTCTTTTATTGTTAAGCTTATCCCAATTATCTGGAATTCCTTATCCTGTTTTTTTGGGTGGAGTAATAATTTCTGCACATCTAACCATTATTAAATTtaataat                                                                                 <  2:772907/140‑1 (MQ=255)
                                                   ccATCGTTCTACGTGAGAGATAATAAACGTTGTTAGTTCTTTTATTGTTAAGCTTATCCCAATTATCTGGAATTCCTTATCCTGTTTTTTTGGGTGGAGTAATAATTTCTGCACATCTAACCATTATTAAATTtaataat                                                                                 <  1:3437744/140‑1 (MQ=255)
                                                             aCGTGAGAGATAATAAACGTTGTTAGTTCTTTTATTGTTAAGCTTATCCCAATTATCTGGAATTCCTTATCCTGTTTTTTTGGGTGGAGTAATAATTTCTGCACATCTAACCATTATTAAATTTAATAATAAGTATCggg                                                                       <  2:2233722/140‑1 (MQ=255)
                                                             aCGTGAGAGATAATAAACGTTGTTAGTTCTTTTATTGTTAAGCTTATCCCAATTATCTGGAATTCCTTATCCTGTTTTTTTGGGTGGAGTAATAATTTCTGCACATCTAACCATTATTAAATTTAATAATAAGTATCggg                                                                       <  2:7259586/140‑1 (MQ=255)
                                                              cGTGAGAGATAATAAACGTTGTTAGTTCTTTTATTGTTAAGCTTATCCCAATTATCTGGAATTCCTTATCCTGTTTTTTTGGGTGGAGTAATAATTTCTg                                                                                                              >  1:10554202/1‑100 (MQ=255)
                                                                tGAGAGATAATAAACGTTGTTAGTTCTTTTATTGTTAAGCTTATCCCAATTATCTGGAATTCCTTATCCTGTTTTTTTGGGTg                                                                                                                             <  2:9402684/83‑1 (MQ=255)
                                                                  agagaTACTAAACGTTGTTAGTTCTTTTATTGTTAAGCTTATCCCAATTATCTGGAATTCATTCTCCTGTTTTTTTGGGTGGAGTAATAATTTCTGCACATCTAACCATTATTAAATTTAATAATAAGTATCGGGTTTGt                                                                  <  1:4173187/140‑1 (MQ=255)
                                                                    agaTAATAAACGTTGTTAGTTCTTTTATTGTTAAGCTTATCCCAATTATCTGGAATTCCTTATCCTGTTTTTTTGGGTGGAGTAATAATTTCTg                                                                                                              <  1:6980724/94‑1 (MQ=255)
                                                                      ataataAACGTTGTTAGTTCTTTTATTGTTAAGCTTATCCCAATTATCTGGAATTCCTTATCCTGTTTTTTTGGGTGGAGTAATAATTTCTGCACATCTAAc                                                                                                    >  2:3907274/1‑102 (MQ=255)
                                                                        aataaACGTTGTTAGTTCTTTTATTGTTAAGCTTATCCCAATTATCTGGAATTCCTTATCCTGTTTTTTTggg                                                                                                                                <  1:4408491/73‑1 (MQ=255)
                                                                        aataaACGTTGTTAGTTCTTTTATTGTTAAGCTTATCCCAATTATCTGGAATTCCTTATCCTGTTTTTTTGGGTg                                                                                                                             >  2:11003844/1‑75 (MQ=255)
                                                                        aataaACGTTGTTAGTTCTTTTATTGTTAAGCTTATCCCAATTATCTGGAATTCCTTATCCTGTTTTTTTGGGTg                                                                                                                             >  2:6564873/1‑75 (MQ=255)
                                                                        aataaACGTTGTTAGTTCTTTTATTGTTAAGCTTATCCCAATTATCTGGAATTCCTTATCCTGTTTTTTTGGGTGGAGTAATAATTTCTg                                                                                                              >  1:3505044/1‑90 (MQ=255)
                                                                        aataaACGTTGTTAGTTCTTTTATTGTTAAGCTTATCCCAATTATCTGGAATTCCTTATCCTGTTTTTTTGGGTGGAGTAATAATTTCTGCACATCTAACCATTATTAAATTTAATAATAAGTATCGGGTTTGTTACGAt                                                            >  1:8494590/1‑140 (MQ=255)
                                                                          taaACGTTGTTAGTTCTTTTATTGTTAAGCTTATCCCAATTATCTGGAATTCCTTATCCTGTTTTTTTGGGTGGAGtaat                                                                                                                      <  2:4406543/80‑1 (MQ=255)
                                                                                ttgttAGTTCTTTTATTGTTAAGCTTATCCCAATTATCTGGAATTCCTTATCCTGTTTTTTTGGGTGGAGta                                                                                                                        <  1:956961/72‑1 (MQ=255)
                                                                                ttgttAGTTCTTTTATTGTTAAGCTTATCCCAATTATCTGGAATTCCTTATCCTGTTTTTTTGGGTGGAGTaataat                                                                                                                   >  1:3969053/1‑77 (MQ=255)
                                                                                  gttAGTTCTTTTATTGTTAAGCTTATCCCAATTATCTGGAATTCCTTATCCTGTTTTTTTGGGTGGAGTAATAATTTCTGca                                                                                                            <  1:5092499/82‑1 (MQ=255)
                                                                                  gttAGTTCTTTTATTGTTAAGCTTATCCCAATTATCTGGAATTCCTTATCCTGTTTTTTTGGGTGGAGTAATAATTTCTGca                                                                                                            >  2:5092498/1‑82 (MQ=255)
                                                                                    tAGTTCTTTTATTGTTAAGCTTATCCCAATTATCTGGAATTCCTTATCCTGTTTTTTTGGGTGGAGtaat                                                                                                                      <  1:6013498/70‑1 (MQ=255)
                                                                                    tAGTTCTTTTATTGTTAAGCTTATCCCAATTATCTGGAATTCCTTATCCTGTTTTTTTGGGTGGAGtaat                                                                                                                      >  2:6013504/1‑70 (MQ=255)
                                                                                      gTTCTTTTATTGTTAAGCTTATCCCAATTATCTGGAATTCCTTATCCTGTTTTTTTGTGTGGAGTAATAATTTCTGCACATCTAACCATTATTAAATTTAATAATAAGTATCGTGTTTTTTACGATAGAATATTTCtata                                              <  1:742616/140‑1 (MQ=255)
                                                                                          ttttATTGTTAAGCTTATCCCAATTATCTGGAATTCCTTATCCTGTTTTTTTGGGTGGAGTAATAATTTCTGCACATCTAACCATTATTAAATTTAATAATAAGTATCGGGTTTGTTACGATAGAATATTTCTATATCCt                                          <  2:8204580/140‑1 (MQ=255)
                                                                                                tGTTAAGCTTATCCCAATTATCTGGAATTCCTTATCCTGTTTTGTTGGGTGGAGTAATAATTTCTGCACATCTAACCATTATTAAATTTAATAATAAGTATCGGGTTTGTTACGATAGAATATTTCTATATCCTCAAGaa                                    <  2:10167618/140‑1 (MQ=255)
                                                                                                    aaGCTTATCCCAATTATCTGGAATTCCTTATCCTGTTTTTTTGGGTGGAGTAATAATTTCTGCACATCt                                                                                                       <  2:5953058/69‑1 (MQ=255)
                                                                                                    aaGCTTATCCCAATTATCTGGAATTCCTTATCCTGTTTTTTTGGGTGGAGTAATAATTTCTGCACATCt                                                                                                       >  1:5953059/1‑69 (MQ=255)
                                                                                                    aaGCTTATCCCAATTATCTGGAATTCCTTATCCTGTTTTTTTGGGTGGAGTAATAATTTCTGCACATCTAACCa                                                                                                  >  1:3799652/1‑74 (MQ=255)
                                                                                                      gCTTATCCCAATTATCTGGAATTCCTTATCCTGTTTTTTTGGGTGGAGTAATAATTTCTGCACATCTAACCATTATTAAATTTAATAATAAGTATCGGGTTTGTTACGATAGAATATTTCTATATCCTCAAGAATATGCt                              <  2:5214735/140‑1 (MQ=255)
                                                                                                       cTTATCCCAATTATCTGGACTTCCTTATCCTGTTTTTTTGGGTGGAGTAATAATTTCTGCACATCTAACCATTATTAAATTTAATAATAAGTATCGGGTTTGTTACGATAGAATATTTCTATATCCTCAAGAATATGCtt                             <  1:8860824/140‑1 (MQ=255)
                                                                                                         tATCCCAATTATCTGGAATTCCTTATCCTGTTTTTTTggg                                                                                                                                >  2:397290/1‑40 (MQ=255)
                                                                                                         tATCCCAATTATCTGGAATTCCTTATCCTGTTTTTTTggg                                                                                                                                >  2:10573835/1‑40 (MQ=255)
                                                                                                          aTCCCAATTATCTGGAATTCCTTATCCTGTTTTTTTGGGTGGAGTAATAATTTCTGCACATCTAAc                                                                                                    <  1:10065398/66‑1 (MQ=255)
                                                                                                          aTCCCAATTATCTGGAATTCCTTATCCTGTTTTTTTGGGTGGAGTAATAATTTCTGCACATCTAACCATTATTAAATTTAATAATAAGTATCGGGTTTGTTACGATAGAATATTTCTATATCCTCAAGAATATGCTTTGc                          >  2:4747733/1‑140 (MQ=255)
                                                                                                              cAATTATCTGGAATTCCTTATCCTGTTTTTTTGGGTGGAGTAATAATTTCTGCACATCTAACCATTATTAAATTTAATAATAAGTATCGGGTTTGTTACGATAGAATATTTCTATATCCTCAAGAATATGCTTTGCCTTa                      <  1:11178028/140‑1 (MQ=255)
                                                                                                                 ttATCTGGAATTCCTTATCCTGTTTTTTTGGGTGGAGTAATAATTTCTg                                                                                                              <  1:7870021/49‑1 (MQ=255)
                                                                                                                    tCTGGAATTCCTTATCCTGTTTTTTTGGGTGGAGTAATAATTTCTGca                                                                                                            >  1:674574/1‑48 (MQ=255)
                                                                                                                      tGGAATTCCTTATCCTGTTTTTTTGGGTGGAGTAATAATTTCTGCACATCTAACCATTATTAAATTTAATAATAAGTATCGGGTTTGTTACGATAGAATATTTCTATATCCt                                          >  1:1574798/1‑112 (MQ=255)
                                                                                                                      tGGAATTCCTTATCCTGTTTTTTTGGGTGGAGTAATAATTTCTGCACATCTAACCATTATTAAATTTAATAATAAGTATCGGGTTTGTTACGATAGAATATTTCTATATCCTCAAGAATATGCTTTGCCTTATTGCCtgt              <  1:7413235/140‑1 (MQ=255)
                                                                                                                        gAATTCCTTATCCTGTTTTTTTGGGTGGAGTAATAATTTCTGCACATCTAACCATTATTAAATTTAATAATAAGTATCGGGTTTGTTACGATAGAATATTTCTATATCCTCAAGAATATGCTTTGCCTTATTGCCTGTGa            <  1:6892634/140‑1 (MQ=255)
                                                                                                                                  tCCTGTTTTTTTGGGTGGAGTAATAATTTCTGCACATCTAACCATTATTAAATTTAATAATAAGTATCGGGTTTGTTACGATAGAATATTTCTATATCCTCAAGAATATGCTTTGCCTTATTGCCTGTGACTTTCTgaga  <  1:3013246/140‑1 (MQ=255)
                                                                                                                                  tCCTGTTTTTTTGGGTGGAGTAATAATTTCTGCACATCTAACAATTATTAAATTTAATAATAAGTATCGGGTTTGTTACGATAGAATATTTCTATATCCTCAAGAATATGCTTTGCCTTATTGCCTGTGACTTTCTgaga  <  2:9664235/140‑1 (MQ=255)
                                                                                                                                       |                                                                                                                                       
AATTAAACTGTCGTCGCTTTCACTCTTTCTTTATAGATGATTTTTTTGATGCCATCGTTCTACGTGAGAGATAATAAACGTTGTTAGTTCTTTTATTGTTAAGCTTATCCCAATTATCTGGAATTCCTTATCCTGTTTTTTTTGGGTGGAGTAATAATTTCTGCACATCTAACCATTATTAAATTTAATAATAAGTATCGGGTTTGTTACGATAGAATATTTCTATATCCTCAAGAATATGCTTTGCCTTATTGCCTGTGACTTTCTGAGA  >  NZ_CP025268/4270268‑4270538

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: