| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 1,629,176 | (T)7→8 | pseudogene (141/392 nt) | ydeI ← | YdeI family stress tolerance OB fold protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 1,629,169 | 1 | . | T | 94.0% | 1124.2 / 55.5 | 315 | pseudogene (148/392 nt) | ydeI | YdeI family stress tolerance OB fold protein |
| Reads supporting (aligned to +/- strand): ref base . (2/17); new base T (84/212); total (86/229) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.13e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 332 total aligned reads displayed.
CGGCCGCAGGAATAACGACATTAATTTCACCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCA‑‑TTTTTTTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCATAAGGCATGACAAGAAAACTTGCTAATACAATGG > NZ_CP025268/1629032‑1629303 | ccGCAGGAATAACGACATTAATTTCACCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCA‑‑ttttt > 2:7337951/1‑140 (MQ=255) gCAGGAATAACGACATTAATTTCACCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCA‑‑ttttttt < 1:4581912/140‑1 (MQ=255) cAGGAATAACGACATTAATTTCACCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCA‑‑tttttttt < 2:1870861/140‑2 (MQ=255) cAGGAATAACGACATTAATTTCACCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCA‑‑tttttttt < 1:5095960/140‑2 (MQ=255) cAGGAATAACGACATTAATTTCACCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCA‑‑tttttttt < 1:9709719/140‑2 (MQ=255) aGGAATAACGACATTAATTTCACCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCA‑‑ttttttttg > 2:4351212/1‑138 (MQ=255) ggAATAACGACAATAATTTCACCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCA‑‑ttttttttgc < 1:6729083/140‑4 (MQ=255) aaCGACATTAATTTCACCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCAT‑TTTTTTTGcatcat < 2:10833664/140‑1 (MQ=255) aCGACATTAATTTCACCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCAT‑TTTTTTTGCatcatc < 2:2110361/140‑1 (MQ=255) cATTAATTTCACCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCAT‑TTTTTTTGCATCATCgggt < 1:3259525/140‑3 (MQ=255) cATTAATTTCACCGCTCATATCGCGAAACACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCAT‑TTTTTTTGCATCATCGGtt < 1:1676072/140‑1 (MQ=255) aTTAATTTCACCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCAT‑TTTTTTTGCATCATCGGTTc > 1:4408536/1‑140 (MQ=255) ttAATTTCACCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCAT‑TTTTTTTGCATCATCGGTTcc > 1:6840960/1‑140 (MQ=255) aTTTCACCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCAT‑TTTTTTTGCATCATCGGTTCcgcg < 2:9349636/140‑1 (MQ=255) ttCACCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCAT‑TTTTTTTGCATCATCGGTTCCGCGAt < 2:10720544/140‑1 (MQ=255) cACCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCAT‑TTTTTTTGCATCATCGGTTCCGCGATAg < 1:7931574/140‑1 (MQ=255) aCCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAATCGCCATCGTGCATGGATTTTGCGAAATCAACGGTCAT‑TTTTTTTGCATCATCGGTTCCGCGATAGc > 1:5920465/1‑140 (MQ=255) aCCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCAT‑TTTTTTTGCATCATCGGTTCCGCGATAGc > 1:5140449/1‑140 (MQ=255) ccGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGATATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCAT‑TTTTTTTGCATCATCGGTTCCGCGATAGcc < 1:10157694/140‑1 (MQ=255) ccGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCAT‑TTTTTTTGCATCATCGGTTCCGCGATAGcc < 2:10399986/140‑1 (MQ=255) ccGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCAT‑TTTTTTTGCATCATCGGTTCCGCGATAGcc < 2:6177475/140‑1 (MQ=255) ccGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCAT‑TTTTTTTGCATCATCGGTTCCGCGATAGcc < 1:3520627/140‑1 (MQ=255) ccGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCAT‑TTTTTTTGCATCATCGGTTCCGCGATAGcc < 1:4211359/140‑1 (MQ=255) ccGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCAT‑TTTTTTTGCATCATCGGTTCCGCGATAGcc < 1:2409956/140‑1 (MQ=255) cGCTCTTATCGCGAACAACGTAACGGTCCTCTCCTCTGTGAGAAATCAAAGTACCGCGTAGTGAAACCGAAGCGCCATCGCGCATGGTTTTTGCGAAATCAACGGTCAT‑TTTTTTTGCATCAACGGTTCCGCGATAGCCa < 1:10808525/140‑1 (MQ=255) cGCTCTTATCGCGAAAAACGTACCGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGACGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCAT‑TTTTTTTGCATCATCGGTTCCGCGATAGCCa < 1:4701551/140‑1 (MQ=255) ctctTATCGCGACAAACGTAACGGTCCTCTCCTTGGTGAGAAATCAAATTACCGCGTAGTGAAACCGCAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCAT‑TTTTTTTGCATCATCGGTTCCGCGATAGCCAtc < 2:8329466/140‑1 (MQ=255) ctctTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCAT‑TTTTTTTGCATCATCGGTTCCGCGATAGCCAtc < 2:690768/140‑1 (MQ=255) ctctTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCAT‑TTTTTTTGCATCATCGGTTCCGCGATAGCCAtc < 2:7550422/140‑1 (MQ=255) ctctTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCAT‑TTTTTTTGCATCATCGGTTCCGCGATAGCCAtc > 1:2587179/1‑140 (MQ=255) ctTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGATAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCAT‑TTTTTTTGCAACATCGGTTCCGCGATAGCCAtctt < 2:8208605/140‑1 (MQ=255) ctTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCAT‑TTTTTTTGCATCATCGGTTCCGCGATAGCCAtctt < 2:47105/140‑1 (MQ=255) ctTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCAT‑TTTTTTTGCATCATCGGTTCCGCGATAGCCAtctt < 2:1162494/140‑1 (MQ=255) aTCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCAT‑TTTTTTTGCATCATCGGTTCCGCGATAGCCATCTTCTa < 2:3284427/140‑1 (MQ=255) gAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCAT‑TTTTTTTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCa < 1:4028580/140‑1 (MQ=255) gAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCAT‑TTTTTTTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCa < 1:11293702/140‑1 (MQ=255) gAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCAT‑TTTTTTTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCa < 1:8594815/140‑1 (MQ=255) gAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCAT‑TTTTTTTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCa > 2:5873032/1‑140 (MQ=255) aaaaaCGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCAT‑TTTTTTTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCAt < 1:6544540/140‑1 (MQ=255) aaaaaCGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCAT‑TTTTTTTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCAt > 1:1961389/1‑140 (MQ=255) cGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCAT‑TTTTTTTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAggc < 1:8494176/140‑1 (MQ=255) tAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCAT‑TTTTTTTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAggcgg < 1:6225654/140‑1 (MQ=255) aaCGGTCCTCTCCATTGTGAGAAATCAAATTACCGCGTAGTGAACCCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCAT‑TTTTTTTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAggcggc < 1:211005/140‑1 (MQ=255) cGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCAT‑TTTTTTTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGcggcgg < 1:4875139/140‑1 (MQ=255) ggTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCAT‑TTTTTTTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGt > 2:3600763/1‑140 (MQ=255) gTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCAT‑TTTTTTTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTg < 1:8387976/140‑1 (MQ=255) ctctCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCAT‑TTTTTTTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGgcg < 1:6278761/140‑1 (MQ=255) ctctCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCAT‑TTTTTTTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGgcg < 2:3090580/140‑1 (MQ=255) tttGTGAGAAATCAAATTACCGCGTAGTTACACAGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAAATGTAA‑‑TTTTTTTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGTCGGTGGAGCTGCATc < 2:520132/140‑1 (MQ=255) ttGTGAGAAATCAAATTACCGCGTAGTGAAACCGACGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCAT‑TTTTTTTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATc < 2:9723495/140‑1 (MQ=255) ttGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCAT‑TTTTTTTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATc < 2:2159404/140‑1 (MQ=255) ttGTGAGAAATCAAAGTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGATTTTGCGAAATCAACGGTCAT‑TTTTTTTGCATCCTCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATc < 2:4308165/140‑1 (MQ=255) tgtgAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCATTTTTTTTTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATc > 2:9062545/1‑140 (MQ=255) tgtgAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCAT‑TTTTTTTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATcc > 2:8906150/1‑140 (MQ=255) tgtgAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCAT‑TTTTTTTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATcc < 2:1002106/140‑1 (MQ=255) tgtgAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCAT‑TTTTTTTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATcc > 2:6034305/1‑140 (MQ=255) tgtgAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCAT‑TTTTTTTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATcc > 2:5856036/1‑140 (MQ=255) tgAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCAT‑TTTTTTTGCATCATCGGTTCCGCGATAGCCCTCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTg > 2:9127647/1‑140 (MQ=255) agaAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCAT‑TTTTTTTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGtt > 2:7826512/1‑140 (MQ=255) gaAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCAT‑TTTTTTTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGttt > 2:2623423/1‑140 (MQ=255) aaTCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCAT‑TTTTTTTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTa > 2:2336119/1‑140 (MQ=255) tCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCAT‑TTTTTTTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTaaa > 1:7195762/1‑140 (MQ=255) cAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCAT‑TTTTTTTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAAc < 2:7283678/140‑1 (MQ=255) aaaTTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCAT‑TTTTTTTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAAcc < 2:10250169/140‑1 (MQ=255) aaaTTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCA‑‑TTTTTTTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCg < 1:3916621/140‑1 (MQ=255) aaTTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCAT‑TTTTTTTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCg > 1:8808188/1‑140 (MQ=255) ttACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCAT‑TTTTTTTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGcc < 1:10003743/140‑1 (MQ=255) tACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCAT‑TTTTTTTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGccc < 2:392429/140‑1 (MQ=255) cgcgTAGTGAACCCGAAGCGCCATCGTGCATGGTTTGTGCGAAATCAACGGTCAT‑TTTTTTTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTgg < 1:10254589/140‑1 (MQ=255) gcgTAGTGACACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCAT‑TTTTTTTGCCTCATCGGTTCCGCGATAGCCATCTTCTTTTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGt < 2:4893438/140‑1 (MQ=255) cgTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCAT‑TTTTTTTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTc > 1:1530485/1‑140 (MQ=255) gTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCAT‑TTTTTTTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCa > 1:10694519/1‑140 (MQ=255) gTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCAT‑TTTTTTTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCa > 2:6787104/1‑140 (MQ=255) aGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCAT‑TTTTTTTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATc < 2:1560692/140‑1 (MQ=255) aGTGAAACCGAAGCGCCATCGTGCAGGGTTATTGCGAAATCAACGGTCAT‑TTTTTTTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATc < 1:9157765/140‑1 (MQ=255) gTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCAT‑TTTTTTTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCt > 2:6500432/1‑140 (MQ=255) aaaCCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCAT‑TTTTTTTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGcc < 1:2907390/140‑1 (MQ=255) aaaCCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCAT‑TTTTTTTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGcc < 1:2236190/140‑1 (MQ=255) aaaCCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCAT‑TTTTTTTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGcc < 1:6245887/140‑1 (MQ=255) aaaCCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCAT‑TTTTTTTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGcc < 1:940451/140‑1 (MQ=255) aaCCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCAT‑TTTTTTTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCa < 1:3728385/140‑1 (MQ=255) aaCCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCAT‑TTTTTTTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCa < 2:8646327/140‑1 (MQ=255) acgcgcCATCGGGCATGGTTTTTGCGAAATCAACGGTCAT‑TTTTTTTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCa < 1:5431099/138‑1 (MQ=255) aaGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCAT‑TTTTTTTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCa < 1:8909529/140‑1 (MQ=255) aaGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCAT‑TTTTTTTGCATCATCGGGTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCa < 2:4425026/140‑1 (MQ=255) ccATCGTGCATGGTTTTTGCGAAATCAACGGTCAT‑TTTTTTTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCATAAgg < 1:10457192/140‑1 (MQ=255) cATCGTGCATGGTTTTTGCGAAATCAACGGTCAT‑TTTTTTTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCATAAGGc < 2:3653364/140‑1 (MQ=255) tCGTGCATGGTTTTTGCGAAATCAACGGTCAT‑TTTTTTTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCATAAGGCAt < 2:4129045/140‑1 (MQ=255) tCGTGCATGGTTTTTGCGAAATCAACGGTCAT‑TTTTTTTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCGGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCATAAGGCAt < 1:7595126/140‑1 (MQ=255) tGGTTTTTGCGAAATCAACGGTCAT‑TTTTTTTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCATAAGGcaagacaaga > 2:6346102/1‑140 (MQ=255) tttttGCGAAATCACCGGTCAT‑TTTTTTTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCATAAGGCATGACAAGaaaa < 1:5603195/140‑1 (MQ=255) tttttGCGAAATCACCGCTCAT‑TTTTTTTGCATCATCGGTTCCGCGATAGCCATCGTCAATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTAAACCCGCCCTGGTCATCTGCCAACGCATAAGGCATGACACGaaaa < 2:9831000/140‑1 (MQ=255) tttttGCGAAATCAACGGTCAT‑TTTTTTTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCATAAGGCATGACAAGaaaa < 1:2766165/140‑1 (MQ=255) tttttGCGAAATCAACGGTCAT‑TTTTTTTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCATAAGGCATGACAAGaaaa < 1:6457783/140‑1 (MQ=255) tttttGCGAAATCAACGGTCAT‑TTTTTTTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCATAAGGCATGACAAGaaaa < 2:11279262/140‑1 (MQ=255) tttttGCGAAATCAACGGTCAT‑TTTTTTTGCATCATCGGTTCCGCGATAGCCATCGTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCATAAGGCATGACAAGaaaa < 2:1366978/140‑1 (MQ=255) tttttGCGAAAACAACGGTCAT‑TTTTTTTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCATAAGGCATGACAAGaaaa < 2:6699276/140‑1 (MQ=255) attGCGAAATACACGGTCAT‑TTTTTTTGCATCATCGGTTCCGCGATAGCCATCTTAGATTGCATGAGTCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGTTCATCTGCCAACGCATAAGTCATGACAAGAAAACt < 2:7787167/139‑1 (MQ=255) ttGCGAAATCAACGGTCAT‑TTTTTTTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCATAAGGCATGACAAGAAAACtt > 2:5592001/1‑140 (MQ=255) tGCGAAATCAACGGTCAT‑TTTTTTTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCATAAGGCATGACAAGAAAACTTg < 1:9878200/140‑1 (MQ=255) | CGGCCGCAGGAATAACGACATTAATTTCACCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTCA‑‑TTTTTTTGCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCATAAGGCATGACAAGAAAACTTGCTAATACAATGG > NZ_CP025268/1629032‑1629303 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |