| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 1,690,360 | (C)5→6 | pseudogene (1047/1403 nt) | fumC ← | class II fumarate hydratase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 1,690,355 | 1 | . | C | 97.5% | 2467.0 / 46.8 | 725 | pseudogene (1052/1403 nt) | fumC | class II fumarate hydratase |
| Reads supporting (aligned to +/- strand): ref base . (9/9); new base C (335/370); total (344/381) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 763 total aligned reads displayed.
TTCGCTCACGATTCGGTTCAATACCCACTGCGCAGTGTTTGTTAAAACTTTCCATGCCATCTGCCAGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCG‑CC‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGACAGCAGAGCATGGTTAATGCCTCACACTGTGTTGGGTTCACTTTCCCCGGCATGATTGAGCTGCCCGGCTCATTTTCCGGGATTGAGATTTCAC > NZ_CP025268/1690216‑1690487 | tCGCTCACGATTCGGTTCAATACCCACTGCGCAGTGTTTGTTAAAACTTTCCATGCCATCTGCCAGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAgcg‑c < 1:6599703/140‑1 (MQ=255) cGCTCACGATTCGGTTCAATACCCACTGCGCAGTGTTTGTTAAAACTTTCCATGCCATCTGCCAGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGACGCG‑cc > 2:8308161/1‑140 (MQ=255) cTCACGATTCGGTTCAATACCCACTGCGCAGTGTTTGTTAAAACTTTCCATGCCATCTGCCAGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCG‑cc‑cc > 1:10360368/1‑140 (MQ=255) ttCGGTTCAATACCCACTGCGCAGTGTTTGTTAAAACTTTCCATGCCATCTGCCAGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCCC‑CCCATGtt < 1:8242006/140‑1 (MQ=255) ttCGGTTCAATACCCACTGCGCAGTGTTTGTTAAAACTTTCCATGCCATCTGCCAGCAAGCGCACCGATTGCAGGAAATTGNGGATCACCATTGGCCGGAAGACGTTCAGTTCAAAGTTACCGGACGCG‑CCNCCCATGtt < 1:6066493/140‑1 (MQ=255) ggTTCAATACCCACTGCGCAGTGTTTGTTAAAACTTTCCATGCCATCTGCCAGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCCC‑CCCATGTTGAt < 1:2584067/140‑1 (MQ=255) ggTTCAATACCCACTGCGCAGTGTTTGTTAAAACTTTCCATGCCATCTGCCAGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCCC‑CCCATGTTGAt > 2:5403591/1‑140 (MQ=255) ggTTCAATACCCACTGCGCAGTGTTTGTTAAAACTGTCCATGCCATCTGCCAGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGCAGCGCCC‑CCCATGTTGAt < 2:503469/140‑1 (MQ=255) tCAATACCCACTGCGCAGTGTTTGTTAAAACTTTCCATGCCATCTGCCAGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCCC‑CCCATGTTGATCGc > 1:108659/1‑140 (MQ=255) cactACCCACTGCGCAGTGTTTGTTAAAACTTTCCAAGCCATCTGCCAGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCCC‑CCCATGTTGATCGcc < 1:8130319/137‑1 (MQ=255) aaTACCCACTGCGCAGTGTTTGTTAAAACTTTCCATGCCATCTGCCAGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCCC‑CCCATGTTGATCGCCa > 1:6368108/1‑140 (MQ=255) aaTACCCACTGCGCAGTGTTTGTTAAAACTTTCCATGCCATCTGCCAGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCCC‑CCCATGTTGATCGCCa > 2:6494459/1‑140 (MQ=255) aaTACCCACTGCGCAGTGTTTGTTAAAACTTTCCATGCCATCTGCCAGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCCC‑CCCATGTTGATCGCCa > 1:3859476/1‑140 (MQ=255) aCCCACTGCGCAGTGTTTGTTAAAACTTTCCCTGCCATCTGCCAGCTAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGGTCAAAGTTACCGGAAGCGCCC‑CCCATGTTGATCGCCAcgt < 2:8112556/140‑1 (MQ=255) cACTGCGCAGTGTTTGTTAAAACTTTCCATGCCATCTGCCAGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCCC‑CCCATGTTGATCGCCAcgtcgt < 1:3299747/140‑1 (MQ=255) aCTGCGCAGTGTTTGTTAAAACTTTCCATGCCATCTGCCAGCAAGCGCACCGATTGCAGGACATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCCC‑CCCATGTTGATCGCCACGTCGtt > 1:4321365/1‑140 (MQ=255) aCTGCGCAGTGTTTGTTAAAACTTTCCATGCCATCTGCCAGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCCC‑CCCATGTTGATCGCCACGTCGtt > 1:4138370/1‑140 (MQ=255) tGCGCAGTGTTTGTTAAAACTTTCCATGCCATCTGCCAGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCCC‑CCCATGTTGATCGCCACGTCGTTcc > 2:2533810/1‑140 (MQ=255) gcgcAGTGTTTGTTAAAACTTTCCATGCCATCTGCCAGCAAGCGCACCGATTGCAGGAAATTGTGTATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCCC‑CCCATGTTGATCGCCACGTCGTTccc > 2:11028010/1‑140 (MQ=255) gcgcAGTGTTTGTTAAAACTTTCCATGCCATCTGCCAGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCCC‑CCCATGTTGATCGCCACGTCGTTccc > 2:2823379/1‑140 (MQ=255) gcAGTGTTTGTTAAAACTTTCCATGCCATCTGCCAGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCCC‑CCCATGTTGATCGCCACGTCGTTCCCCa > 1:3497740/1‑140 (MQ=255) aGTGTTTGTTAAAACTTTCCATGCCATCTGCCAGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCCC‑CCCATGATGATCGCCACGTCGATCCCCATc > 2:10053268/1‑140 (MQ=255) gtgtTTGTTAAAACTTTCCATGCCATCTGCCAGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCCC‑CCCATGTTGATCGCCACGTCGTTCCCCATCa < 2:4690314/140‑1 (MQ=255) gtgtTTGTTAAAACTTTCCATGCCATCTGCCAGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCCC‑CCCATGTTGATCGCCACGTCGTTCCCCATCa < 1:9170492/140‑1 (MQ=255) tttgttAAAACTTTCCATGCCATCTGCCAGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCCC‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCt < 2:10777726/140‑1 (MQ=255) tgttAAAACTTTCCATGCCATCTGCCAGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCCC‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGa > 2:6699851/1‑140 (MQ=255) tgttAAAACTTTCCATGCCATCTGCCAGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCCC‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGa < 1:10555543/140‑1 (MQ=255) gttAAAACTTTCCATGCCATCTGCCAGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCCC‑CCCATGTTGATCGCCAcgtcgt > 2:7899359/1‑125 (MQ=255) gttAAAACTTTCCATGCCATCTGCCAGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCCC‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGAc > 2:3869872/1‑140 (MQ=255) ttAAAACTTTCCATGCCATCTGCCAGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCCC‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGAca < 1:5580422/140‑1 (MQ=255) tAAAACTGTCCATGCCATCTGCCAGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCCC‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGAcag < 2:6887308/140‑1 (MQ=255) aaCTTTCCATGCCATCTGCCAGCAAGCGCACCGATTGCAGGAATTTGTGGATCACCCTTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCCC‑CCCCTGTGGATCGCCACGTCGTTCCCCATCACCTGAcagcag > 2:6091650/1‑140 (MQ=255) aaCTTTCCATGCCATCTGCCAGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCCC‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGAcagcag > 1:2679772/1‑140 (MQ=255) aaCTTTCCATGCCATCTGCCAGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCCC‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGAcagcag > 1:2343295/1‑140 (MQ=255) aaCTTTCCATGCCATCTGCCAGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCCC‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGAcagcag > 1:1824669/1‑140 (MQ=255) aaCTTTCCATGCCATCTGCCAGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCCC‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGAcagcag > 2:147698/1‑140 (MQ=255) cTTTCCATGCCATCTGCCAGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCCC‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGACAGCagag < 2:8567817/140‑1 (MQ=255) tttCCATGCCATCTGCCAGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCCC‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGACAGCAGAGc < 1:1392667/140‑1 (MQ=255) tgtCCATGCCATCTGCCAGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCCC‑CCCTTGTTGATCGCCACGTCGTTCCCCATCACCTGACAGCTGAGc < 2:7567171/138‑1 (MQ=255) ttCCATGCCATCTGCCAGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCCC‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGACAGCAGAGCa < 1:3028118/140‑1 (MQ=255) ccATGCCATCTGCCAGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCCC‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGACAGCAGAGCATg > 1:7117606/1‑140 (MQ=255) ccATGCCATCTGCCAGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCCC‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGACAGCAGAGCATg > 1:3692935/1‑140 (MQ=255) ccATGCCATCTGCCAGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCG‑cc‑cccc < 2:8163464/95‑2 (MQ=255) gacATCTGCCAGCTAGCGCACCGATTGCAGGAAATTGTGGATCACAATTGGACGGAAGACGGTCAGTTCAACGTTACCGGAAGCGCCC‑CCCATGTTGATCTCAACGTCGTACCCCATCACCGGACAGCAGAGCAAGGATa < 2:11464468/138‑1 (MQ=255) gCCATCTGCCAGCACGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGACGCGCCC‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGACAGCAGAGCATGGTTa < 2:10219359/140‑1 (MQ=255) gCCATCTGCCAGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGCAGACGTTCAGTTCAAAGTTACCGGAAGCGCCC‑CCCATGTAGATCGCCACGTCGGTCCCCATCCCCTGACAGCAGAGCATGGttt < 2:772653/140‑2 (MQ=255) gCCATCTGCCAGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCCC‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGACAGCAGAGCATGGTTa < 1:7547150/140‑1 (MQ=255) gCCATCTGCCAGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCCC‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGACAGCAGAGCATGGTTa < 2:5561807/140‑1 (MQ=255) gCCATCTGCCAGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCCC‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGACAGCAGAGCATGGTTa < 1:3190385/140‑1 (MQ=255) gCCATCTGCCAGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCCC‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGACAGCAGAGCATGGTTa < 1:4573533/140‑1 (MQ=255) gCCATCTGCCAGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCCC‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGACAGCAGAGCATGGTTa < 1:5420026/140‑1 (MQ=255) gCCATCTGCCAGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCCC‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGACAGCAGAGCATGGTTa < 2:3212748/140‑1 (MQ=255) gCCATCTGCCAGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCCC‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGACAGCAGAGCATGGTTa < 1:11336131/140‑1 (MQ=255) gCCATCTGCCAGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCCC‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGACAGCAGAGCATGGTTa < 2:4013704/140‑1 (MQ=255) gCCATCTGCCAGCAAGCGCACCGATTGCAGGAAATTGAGGCGCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCCC‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGACAGCAGAGCATGGTTa < 2:10652212/140‑1 (MQ=255) gCCATCTGCCAGCAAGCGCACCGAGTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCCC‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGACAGCAGAGCATGGTTa < 2:7191058/140‑1 (MQ=255) cATCTGCCAGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCCC‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGACAGCAGAGCATGGTTAAt < 1:5258739/140‑1 (MQ=255) cTGCCAGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCCC‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGACAGCAGAGCATGGTTAATGcc < 2:1801766/140‑1 (MQ=255) cTGCCAGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCCC‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGACAGCAGAGCATGGTTAATGcc > 1:7822285/1‑140 (MQ=255) cTGCCAGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCCC‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGACAGCAGAGCATGGTTAATGcc < 1:5899309/140‑1 (MQ=255) cTGCCAGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCCC‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGACAGCAGAGCATGGTTAATGcc > 1:6842827/1‑140 (MQ=255) aGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCCC‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGACAGCAGAGCATGGTTAATGCCTcaca < 1:7903451/140‑1 (MQ=255) aGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCCC‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGACAGCAGAGCATGGTTAATGCCTcaca < 2:1221034/140‑1 (MQ=255) aGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCCC‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGACAGCAGAGCATGGTTAATGCCTcaca < 1:1185596/140‑1 (MQ=255) aGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCCC‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGACAGCAGAGCATGGTTAATGCCTcaca < 1:5045227/140‑1 (MQ=255) cAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCCC‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGACAGCAGAGCATGGTTAATGCCTCACACt > 1:8720530/1‑140 (MQ=255) aGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCCC‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGACAGCAGAGCATGGTTAATGCCTCACACtgt < 1:7289966/140‑1 (MQ=255) gcgcACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCCC‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGACAGCAGAGCATGGTTAATGCCTCACACtgtg < 1:4834048/140‑1 (MQ=255) cgcACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCCC‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGACAGCAGAGCATGGTTAATGCCTCACACTgtgt > 2:5658157/1‑140 (MQ=255) cACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCCC‑CCCATGTTGATCGCCCCGTCGTTCCCCATCACCTGACAGCAGAGCATGGTTAATGCCTCACACTGTGTTg > 1:11142649/1‑140 (MQ=255) cGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCCC‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGACAGCAGAGCATGGTTAATGCCTCACACTGTGTTGGGt < 1:90640/140‑1 (MQ=255) ctGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCCC‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGACAGCAGAGCATGGTTAATGCCTCACACTGTGTTGGGTTCa < 1:1974981/139‑1 (MQ=255) tGCAGGACATTGTGGATCACCAGTGGACGGAAGACGGTCAGTTCAAAGTTACCGGAAGCGCCC‑CCCAGGTTGATCGCCACGTCGGTCCCCATCACCTGACAGCCGAGCATGGTTAATGCCGCACACTGTGTGGGGTTCAc > 2:4463984/1‑140 (MQ=255) tGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCCC‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGACAGCAGAGCATGGTTAATGCCTCACACTGTGTTGGGTTCAc < 1:2871763/140‑1 (MQ=255) gCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCCC‑CCCATGTTGATCGCCACGTCGTTccc < 2:3008518/88‑1 (MQ=255) aaaTTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACAGGAAGCGCCC‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGACAGCAGAGCATGGTTAATGCCTCACACTGTGTTGGGTTCACTTTccc < 2:3501196/140‑1 (MQ=255) ttGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCCC‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGACAGCAGAGCATGGTTAATGCCTCACACTGTGTTGGGTTCACTTTCCCCgg < 2:7062080/140‑1 (MQ=255) ttGTGGATCACCATTGGACGGAAGACGATCAGTTCAAAGTTACCGGAAGCGCCC‑CCCATGTTGATCGCCTCGTCGTTCCCCATCACCTGACAGCAGAGCATGGTTAATGCCTCACTCTGTGTTGGGTTCACTTTCCCCgg < 1:10001080/140‑1 (MQ=255) ggATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCCC‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGACAGCAGAGCATGGTTAATGCCTCACACTGTGTTGGGTTCACTTTCCCCGGCATg < 2:5262801/140‑1 (MQ=255) gATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCCC‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGACAGCAGAGCATGGTTAATGCCTCACACTGTGTTGGGTTCACTTTCCCCGGCATGa < 1:8953420/140‑1 (MQ=255) aTCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCCC‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGACAGCAGTGCATGGTTAATGCCTCACACTGTGTTGGGTTCACTTTCCCCGGCATGag > 2:1989006/1‑139 (MQ=255) ttGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCCC‑CCCATGTTGATCGCCACGTCGTTCCCCCTCACCTGACAGCAGAGCAGGGTTAATGCCTCACACTGTGTTGGGTTCACTTGCCCCGGCCTGATTGCGCTg > 2:9686030/1‑140 (MQ=255) ggACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCCC‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGACAGCAGAGCATGGTTAATGCCTCACACTGTGTTGGGTTCACTTTCCCCGGCATGATTGAGCTGcc < 2:10340190/140‑1 (MQ=255) gACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCCC‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGACAGCAGAGCATGGTTAATGCCTCACACTGTGTTGGGTTCACTTTCCCCGGCATGATTGAGCTGccc > 2:880310/1‑140 (MQ=255) cGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCCC‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGACAGCAGAGCATGGTTAATGCCTCACACTGTGTTGGGTTCACTTTCCCCGGCATGATTGAGCTGCCCgg > 2:4108207/1‑140 (MQ=255) cGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCCC‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGACAGCAGAGCATGGTTAATGCCTCACACTGTGTTGGGTTCACTTTCCCCGGCATGATTGAGCTGCCCgg > 2:9447132/1‑140 (MQ=255) aaGACGTTCAGTTCAAAGTTACCGGAAGCGCCC‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGACAGCAGAGCATGGTTAATGCCTCACACTGTGTTGGGTTCACTTTCCCCGGCATGATTGAGCTGCCCGGCTc > 1:10235274/1‑140 (MQ=255) aaGACGTTCAGTTCAAAGTTACCGGAAGCGCCC‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGACAGCAGAGCATGGTTAATGCCTCACACTGTGTTGGGTTCACTTTCCCCGGCATGATTGAGCTGCCCGGCTc > 2:4226068/1‑140 (MQ=255) aaGACGTTCAGTTCAAAGTTACCGGAAGCGCCC‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGACAGCAGAGCATGGTTAATGCCTCACACTGTGTTGGGTTCACTTTCCCCGGCATGATTGAGCTGCCCGGCTc > 2:9229273/1‑140 (MQ=255) aaGACGTTCAGTTCAAAGTTACCGGAAGCGCCC‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGACAGCAGAGCATGGTTAATGCCTCACACTGTGTTGGGTTCACTTTCCCCGGCATGATTGAGCTGCCCGGCTc > 2:2236595/1‑140 (MQ=255) aaGACGTTCAGTTCAAAGTTACCGGAAGCGCCC‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGACAGCAGAGCATGGTTAATGCCTCACACTGTGTTGGGTTCACTTTCCCCGGCATGATTGAGCTGCCCGGCTc > 1:2152130/1‑140 (MQ=255) aaGACGTTCAGTTCAAAGTTACCGGAAGCGCCC‑CCCATGTTGAACCCCACGTCGTTCCCCATCACCTGACAGCATAGCATGGTTAATGCCACACACTGTGTAGGGTTCACTTTCCCCGGCATGATTTAGCTGCCCGGCTc > 2:5919227/1‑140 (MQ=255) aaGACGTTCAGGTCAAAGTTACCGGAAGCGCCC‑CCCATGTTGATCGCCACTTCGGTCCCCATCACCTGCCAGCAGAGCCTGGTTAATGCCGCCCACTGTGTTGGGTTCACTTTCCGCGGCATGATTGTGCTGCGCGGCTc > 2:6202853/1‑140 (MQ=255) gttcagttcaAAGTTACCGGAAGCGCCC‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGACAGCAGAGCATGGTTAATGCCTCACACTGTGTTGGGTTCACTTTCCCCGGCATGATTGAGCTGCCCGGCTCAtttt > 2:9042937/1‑140 (MQ=255) ttcagttcaAAGTTACCGGAAGCGCCC‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGACAGCAGAGCATGGTTAATGCCTCACACTTTGTTGGTTTCACTTTCCCCGGCATGATTGAGCTGCCCGGCTCATTTTc < 2:3682413/140‑1 (MQ=255) gttcaAAGTTACCGGAAGCGCCC‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGACAGCAGAGCATGGTTAATGCCTCACACTGTGTTGGGTTCACTTTCCCCGGCATGATTGAGCTGCCCGGCTCATTTTCCggg > 1:953853/1‑140 (MQ=255) gttcaAAGTTACCGGAAGCGCCC‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGACAGCAGAGCATGGTTAATGCCTCACACTGTGTTGGGTTCACTTTCCCCGGCATGATTGAGCTGCCCGGCTCATTTTCCggg > 2:3337489/1‑140 (MQ=255) tcaAAGGTACCGGAAGCGCCC‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGACAGCAGAGCATGGTTAATGCCTCACACTGTGTTGGGTTCACTTTCCCCGGCATGATTGAGCTGCCCGGCTCATTTTCCGGGAt < 1:9708437/140‑1 (MQ=255) tACCGGCAGCGCCC‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGACAGCAGAGCATGGTTAATGCCTCACACTGTGTTGGGTTCACTTTCCCCGGCATGATTGAGCTGCCCGGCTCATTTTCCGGGATTGAGAtt < 1:625416/140‑1 (MQ=255) ccGGAAGCGCCC‑CCCATGGTGATCGCCACGTCGTTCCCCATCACCTGACAGCAGAGCATGGTTAATGCCTCACACTGTGTTGGGTTCACTTTCCCCGGCATGATTGAGCTGCCCGGCTCATTTTCCGGGATTGAGATTTc < 1:1533463/140‑1 (MQ=255) | TTCGCTCACGATTCGGTTCAATACCCACTGCGCAGTGTTTGTTAAAACTTTCCATGCCATCTGCCAGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCG‑CC‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGACAGCAGAGCATGGTTAATGCCTCACACTGTGTTGGGTTCACTTTCCCCGGCATGATTGAGCTGCCCGGCTCATTTTCCGGGATTGAGATTTCAC > NZ_CP025268/1690216‑1690487 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |