| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 1,701,269 | +A | intergenic (‑380/+10) | uidA ← / ← uidR | beta‑glucuronidase/DNA‑binding transcriptional regulator UidR |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 1,701,265 | 1 | . | A | 91.3% | 2517.6 / 207.9 | 725 | intergenic (‑376/+14) | uidA/uidR | beta‑glucuronidase/DNA‑binding transcriptional regulator UidR |
| Reads supporting (aligned to +/- strand): ref base . (24/39); new base A (316/344); total (341/384) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.48e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 749 total aligned reads displayed.
AGCGTATTGGGAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCG‑A‑A‑A‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGTCAGATCCAGCAGTAAACG > NZ_CP025268/1701126‑1701401 | cGTATTGGGAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCG‑a‑a < 2:7974076/140‑1 (MQ=255) tGGGAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCG‑a‑a‑a‑aaga > 1:5083126/1‑137 (MQ=255) ggAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCG‑A‑A‑a‑a‑‑agaga < 2:9387046/140‑1 (MQ=255) ggAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCG‑A‑A‑a‑a‑‑agaga < 1:1309747/140‑1 (MQ=255) ggAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCG‑A‑A‑a‑a‑‑agaga < 2:10959543/140‑1 (MQ=255) aaCGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCG‑A‑A‑A‑a‑‑agagaga < 1:4034196/140‑1 (MQ=255) aaCGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCG‑A‑A‑A‑a‑‑agagaga < 1:8801863/140‑1 (MQ=255) aaCGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCG‑A‑A‑A‑a‑‑agagaga > 2:8562432/1‑140 (MQ=255) gATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑A‑A‑GAGAGAGaa > 1:2261215/1‑140 (MQ=255) aTAAACTCTCATGACATATGGCTACAGTGACTATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑A‑A‑GAGAGAGAAt > 2:7545302/1‑140 (MQ=255) tAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑A‑A‑GAGTGAGAATc > 1:6121336/1‑140 (MQ=255) aCTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑A‑A‑GAGAGAGAATCAgg > 1:7593578/1‑140 (MQ=255) tctcATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑A‑A‑GAGAGAGAATCAGGAt < 2:10725007/140‑1 (MQ=255) tctcATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑A‑A‑GAGAGAGAATCAGGAt < 1:2626869/140‑1 (MQ=255) tctcATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑A‑A‑GAGAGAGAATCAGGAt < 2:11383425/140‑1 (MQ=255) tctcATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑A‑A‑GAGAGAGAATCAGGAt < 2:3072621/140‑1 (MQ=255) tctcATGACATATGGCGACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑A‑A‑GAGAGAGAATCAGGAt < 2:7171278/140‑1 (MQ=255) tctcATGACATACGGCTACAGAGAATATTTGGGGGGGAATTCTCCGAAGCCGGGAAGGATACTTTTTGCACAGAGAAATTACGATATGAAACTCGGGCCCAGTTATCACCAGCCCGCCGAA‑A‑A‑A‑GAGAGAGAATCAGGAt < 2:9871874/140‑1 (MQ=255) tcATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑A‑A‑GAGAGAGAATCAGGATGc < 1:7259105/140‑1 (MQ=255) tcATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑A‑A‑GAGAGAGAATCAGGATGc < 1:9970324/140‑1 (MQ=255) cATGACATAGGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATGTTTGCACAGTGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCG‑A‑ACT‑G‑GAGCGAGGATCGGGATGCg > 1:10740314/1‑140 (MQ=255) aTGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGGTCTCACCAGCCCGCCGAA‑A‑A‑A‑GAGAGAGAATCAGGATGCgg > 1:9638237/1‑140 (MQ=255) gACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑A‑A‑GAGAGAGAATCAGGATGCGGtt < 2:809196/140‑1 (MQ=255) tatGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑A‑A‑GAGAGAGAATCAGGATGCGGTTAAGa > 2:2281091/1‑140 (MQ=255) atGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑A‑A‑GAGAGAGAATCAGGATGCGGTTAAGAt < 2:3278955/140‑1 (MQ=255) tGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCTGGAAGGATAATTTTTGCACATAGAAATTACGATATGAAACTCGGGCACAGTTATCACCAGCCCGCAGAA‑A‑A‑A‑GAGAGAGAATCAGGATGCGGTTAAGATa > 2:5517246/1‑140 (MQ=255) tGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑A‑A‑GAGAGAGAATCAGGATGCGGTTAAGATa > 1:3730270/1‑140 (MQ=255) tGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCG‑A‑A‑A‑ATGAGAGAGAATCAGGATGCGGTTAAGATa > 2:8791112/1‑140 (MQ=255) tACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑A‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGc < 1:3850553/140‑1 (MQ=255) cAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGCTCTGAAACGCGGGCCCAGTCATCACCAGCCCGCCGAA‑A‑A‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCa > 2:1284541/1‑140 (MQ=255) cAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑A‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGc < 1:3207917/138‑1 (MQ=255) cAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑A‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCa < 1:2976609/140‑1 (MQ=255) aGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑A‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCaa > 1:3535959/1‑140 (MQ=255) aGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑A‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCaa > 1:7170635/1‑140 (MQ=255) tGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑A‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAatc > 1:10019442/1‑140 (MQ=255) tGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCAGAA‑A‑A‑A‑GAGAGAGAATCAGGATGCGGTGAAGATAACGCCaaga > 2:7411245/1‑138 (MQ=255) aaTATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑A‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCActcat > 2:10851102/1‑140 (MQ=255) aaTATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑A‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAatcat < 1:1099729/140‑1 (MQ=255) aaTATTGTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCG‑A‑A‑ACA‑GAGAGAGAATCAGGATGCGGTTAAGATAACGCCAatcat > 2:6156602/1‑140 (MQ=255) atatTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGAAGAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCGGAA‑A‑A‑A‑GAGAGAGAATCAGGATGCGGTGAAGATACCGCCAaacatc > 2:9636098/1‑140 (MQ=255) tatTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑A‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATcg < 2:3494018/140‑1 (MQ=255) tatTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑A‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATcg < 2:4637349/140‑1 (MQ=255) ttGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑A‑A‑GAGAGAGACTCAGGATGCGGTTAAGATACCGCCAATCATcgcgcg > 1:11433347/1‑140 (MQ=255) tGGGGTGAATTCTCCGAAGCCGGGAAGGATAATGTGTGCACAGAGAAATTACGATATGAACCGCGGGCACAGGTATCACCAGCCCGCCGAA‑A‑A‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCTATCATCGCGCGt < 2:4264023/140‑1 (MQ=255) tGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑A‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGt < 2:2194523/140‑1 (MQ=255) tGGGGGGAATTCTCCGAAGCCGGGAAGGATAATATTTGCACCGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑A‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGt < 1:9330362/140‑1 (MQ=255) ggggggAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑A‑A‑GAGAGAGAATCAGGATGc < 1:11189064/111‑1 (MQ=255) ggggggAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑A‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTa > 2:6590843/1‑140 (MQ=255) ttCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑A‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGa > 1:2130196/1‑140 (MQ=255) aGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑A‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAacga < 1:1890954/140‑1 (MQ=255) aGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑A‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAacga > 1:4409914/1‑140 (MQ=255) aGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑A‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAacga > 2:445776/1‑140 (MQ=255) ccGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑A‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAacgacg > 1:5743218/1‑140 (MQ=255) ccGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑A‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAacgacg < 2:2652670/140‑1 (MQ=255) gATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑A‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCAcgc < 2:10625922/140‑1 (MQ=255) gATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑A‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCAcgc < 2:1171351/140‑1 (MQ=255) tAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑A‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACgcgc < 1:8562433/140‑1 (MQ=255) tAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑A‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACgcgc < 2:4865977/140‑1 (MQ=255) tGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑A‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCt < 1:10276786/140‑1 (MQ=255) agaAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑A‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCtt < 2:5380496/140‑1 (MQ=255) agaAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑A‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCtt > 1:6791945/1‑140 (MQ=255) agaAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑A‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCtt > 1:1777044/1‑140 (MQ=255) agaAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑A‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCtt > 2:3748552/1‑140 (MQ=255) aaTTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑A‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGa < 1:2538986/140‑1 (MQ=255) ttACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑A‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGata < 2:5082527/140‑1 (MQ=255) ttACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑A‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGata < 1:1574376/140‑1 (MQ=255) atatGAACCGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑A‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGc < 1:5265592/140‑1 (MQ=255) atatGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑A‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGc < 1:8113855/140‑1 (MQ=255) atatGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑A‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGc < 1:6612639/140‑1 (MQ=255) atatGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑A‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGc > 1:9844111/1‑140 (MQ=255) atatGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑A‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCCCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGc < 1:6944634/140‑1 (MQ=255) atatGAAACGAGGTCACAGTTATCACCAGCCCGCCGAA‑A‑A‑A‑GAGATAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTTAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGc < 2:10464928/140‑1 (MQ=255) gAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑A‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGc > 1:9061407/1‑136 (MQ=255) gAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑A‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGt < 1:284135/140‑1 (MQ=255) acaCGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑A‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTa < 1:6478113/138‑1 (MQ=255) aaaCGCGGGCACAGTTATCACCAGCCCGCCGAA‑A‑A‑A‑GAGAGAGAATCAGGCTGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTa < 1:3317981/140‑1 (MQ=255) aCGCGGGCCCAGTTATCACCAGCCAGCCG‑A‑A‑ACA‑GAGAGAGAATCTGGATGCGGTTAACATACCGCCAATCATCGCGCGTAATCCCTGAGCAATCGAGGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTgca > 2:2400990/1‑140 (MQ=255) gcgGGCACAGTTATCACCAGCCCGCCGAA‑A‑A‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACAcc < 2:1642121/140‑1 (MQ=255) cgGGCACAGTTATCACCAGCCCGCCGAA‑A‑A‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCg < 2:2765532/140‑1 (MQ=255) gggCACAGTTATCACCAGCCCGCCGAA‑A‑A‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGt < 2:5922194/140‑1 (MQ=255) gggCACAGTTATCACCAGCCCGCCGAA‑A‑A‑A‑GAGAGAGAATCAGGAAGCGTTTAAGATACCGCCAATCATCGCGCTTAATCCCTGAGCAAACGACGCTACACGCGCCCGGTCTACCGCTTCGATATCGGCCAGTACACCgg > 2:11148817/1‑139 (MQ=255) gggCACAGTGATCACCCGCCCGCCG‑ACA‑A‑A‑GAGAGAGAATCTGGATGCGGTTACTATACCGCCAACCATCGCGCTTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGt < 1:10601499/140‑1 (MQ=255) caGTTATCACCAGCCCGCCGAA‑A‑A‑A‑TAGAGAGAATCAGGATGCGGTTAAGATCCCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGTc < 2:412269/140‑1 (MQ=255) caGTTATCACCAGCCCGCCGAA‑A‑A‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGTc < 2:3880908/140‑1 (MQ=255) ttATCACCAGCCCGCCGAA‑A‑A‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGTCAGa > 1:4632730/1‑140 (MQ=255) aTCACCAGCCCGCCGAA‑A‑A‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTTCACCGTAGGTCAGATc > 2:1470820/1‑140 (MQ=255) aTCACCAGCCCGCCGAA‑A‑A‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGTCAGATc < 2:2927265/140‑1 (MQ=255) accccAGCCCGCCGCC‑A‑A‑A‑GAGAGCCACTCCGGACGCCGTGACGATACCGCCCATACTCGCGCCTCATCCCTGAGCAAACGCCCCTTCACGCGCCAGGTCGTCCGCTTCGATATCGGCCAGTACCCCGGAGGTCAGAtgc < 2:9099643/137‑3 (MQ=255) cACCAGCCCGCCGAA‑A‑A‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCGTCGATATCGGCCAGTACACCGTAGGTCAGATCca > 2:7093778/1‑140 (MQ=255) aCCAGCCCGCCGAA‑A‑A‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGTCAGATCcag < 2:9803688/140‑1 (MQ=255) aGCCCGCCGAA‑A‑A‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCACACGACGCTTCACGCGCCCGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGTCAGATCcagcag > 2:8366844/1‑140 (MQ=255) aGCCCGCCGAA‑A‑A‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGTCAGATCcagcag > 2:8941494/1‑140 (MQ=255) aGCCCGCCGAA‑A‑A‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGTCAGATCcagcag > 2:1752909/1‑140 (MQ=255) cccGCCGAA‑A‑A‑A‑GAGAGAGAATCAGGATGCGGTTAAGATCCCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATAGCGGCCAGTACACCGTAGGTCAGATCaagcagga > 2:1887412/1‑138 (MQ=255) cccGCCGAA‑A‑A‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGTCAGATCCAGCAGTa > 2:7715225/1‑140 (MQ=255) cccGCCGAA‑A‑A‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGTCAGATCCAGCAGTa > 1:8317246/1‑140 (MQ=255) cccGCCGAA‑A‑A‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGTCAGATCCAGCAGTa > 2:6784545/1‑140 (MQ=255) cccGCCGAA‑A‑A‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGTCAGATCCAGCAGTa > 2:2008012/1‑140 (MQ=255) cgccgaA‑A‑A‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGTCAGATCCAGCAGTaaa > 1:4278866/1‑140 (MQ=255) cgccgaA‑A‑A‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGTCAGATCCAGCAGTaaa > 1:5533698/1‑140 (MQ=255) | AGCGTATTGGGAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCG‑A‑A‑A‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGTCAGATCCAGCAGTAAACG > NZ_CP025268/1701126‑1701401 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |