| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 1,826,683 | (A)7→8 | intergenic (‑247/+51) | chbB ← / ← osmE | PTS N,N'‑diacetylchitobiose transporter subunit IIB/osmotically‑inducible lipoprotein OsmE |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 1,826,676 | 1 | . | A | 95.1% | 2903.9 / 115.7 | 805 | intergenic (‑240/+58) | chbB/osmE | PTS N,N'‑diacetylchitobiose transporter subunit IIB/osmotically‑inducible lipoprotein OsmE |
| Reads supporting (aligned to +/- strand): ref base . (33/6); new base A (474/288); total (510/295) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.65e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 813 total aligned reads displayed.
GCTGAAAGGAGTATACGGTATAGACCTGAGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCC‑A‑A‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCTGATAACCGGAGTTGATGACATGTCCGGTATCAT > NZ_CP025268/1826541‑1826810 | tataCGGTATAGACCTGAGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑A‑AA‑AAA‑CCGgcgc > 2:2085592/1‑140 (MQ=255) taCGGTATAGACCTGAGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑A‑AA‑AAA‑CCGGCGCaa < 2:10765326/140‑1 (MQ=255) tataGACCTGAGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑A‑AA‑AAA‑CCGGCGCAATGGcc > 1:2028618/1‑140 (MQ=255) tataGACCTGAGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑A‑AA‑AAA‑CCGGCGCAATGGcc > 2:8965170/1‑140 (MQ=255) ataGACCTGAGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCACATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑A‑AA‑AAA‑CCGGCGCAATGGCCg > 2:9393348/1‑140 (MQ=255) ataGACCTGAGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑A‑AA‑AAA‑CCGGCGCAATGGCCg > 1:1668839/1‑140 (MQ=255) aGACCTGAGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATACTTAAGAACTCAGGCC‑ATA‑AA‑AAA‑CCGGCGCAATGGCCGGt > 1:3379976/1‑140 (MQ=255) aGACCTGAGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑A‑AA‑AAA‑CCTGCGCAATGGACGGt > 2:6011746/1‑140 (MQ=255) aGACCTGAGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑A‑AA‑AAA‑CCGGCGCAATGGCCGGt > 1:2142846/1‑140 (MQ=255) gACCTGAGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATGTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑A‑AA‑AAA‑CCGGCGCAATGGCCGGtt < 1:3639730/140‑1 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGCAGATTATTAAGAACTCAGGCC‑A‑A‑AA‑AAATCCGGCGCAATGGCCGGGTTCCgtg > 1:9481236/1‑139 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAATATAATTAAGAACTCAGGCCAA‑A‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCgtt > 1:103839/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑A‑AA‑AAA‑CCGGCGCACTGGCCGGTTTCCgtt > 2:1777740/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑A‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCgtt > 2:5224813/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑A‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCgtt > 2:10550476/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑A‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCgtt > 1:5500294/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑A‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCgtt > 1:8960411/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑A‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCgtt > 1:8430943/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑A‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCgtt > 2:3347623/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑A‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCgtt > 1:4317795/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑A‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCgtt > 2:3635076/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑A‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCgtt > 2:9767910/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑A‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCgtt > 1:3123368/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑A‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCgtt > 1:10997093/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑A‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCgtt > 1:1146659/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑A‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCgtt > 1:2400842/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑A‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCgtt > 1:2969944/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑A‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCgtt > 2:8703928/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑A‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCgtg > 1:9147041/1‑139 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑A‑AA‑AAA‑CAGGCGCACTGGCCGGTTTCCgtt > 2:10995533/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCC‑A‑A‑AATAAA‑CCGGCGCAATGGCCGGGTTCGgtg > 1:7151142/1‑139 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAAGTAAGAACTCAGGCCAA‑A‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCgtt > 1:5187670/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCATCTTCACATTTCGGGCAAATAATTCGAGAAGATAATTAAGAACTCAGGCC‑AGA‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCgtt > 2:3273265/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAAATGTTTCTCCTTCAACTGTGGTTATGACAATCTTAACATTTAGTGCAAAAAATTCTCGAAGATAATTAAGAACTCAGGAC‑A‑ATAA‑TAA‑CCGGCTCCATGGCAGGTATCCgtg > 2:8527541/1‑139 (MQ=255) aGCAATAGTATTTCTTTGACCTTAAAAATTGTTTCTCCTTGACCTGTGGTTATGACCATCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑A‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCGgtt > 2:2983890/1‑140 (MQ=255) tAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGTCCAA‑A‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTAc > 2:2147719/1‑140 (MQ=255) gTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑A‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTc > 1:3256802/1‑140 (MQ=255) tttCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCTCGAAGATCATTAAGAACTCAGGCCAA‑A‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTAATCAAg > 2:6247662/1‑140 (MQ=255) ttGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGTCCAA‑A‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTc > 2:3193373/1‑140 (MQ=255) ttGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑A‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTc > 2:5459301/1‑140 (MQ=255) tGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑A‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCa > 1:4866233/1‑140 (MQ=255) gACATTAGAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTACACATTTCGGGCACATAAGTCGCGAAGATAATTAAGAACTCAGGCCAA‑A‑AA‑AAA‑CAGGCGCAATTGCCGGGTTCCGTTGTTACTCAAGCttgaag > 2:9183086/1‑136 (MQ=255) aCCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑A‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGa > 1:6372888/1‑140 (MQ=255) aCCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑A‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGa > 2:8046661/1‑140 (MQ=255) aCCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑A‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGa > 2:4156401/1‑140 (MQ=255) aCCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑A‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGa > 2:7195640/1‑140 (MQ=255) ccTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑A‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGAc < 1:1809950/140‑1 (MQ=255) tataAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACAATTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑A‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGaa < 2:10215762/140‑1 (MQ=255) ataAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑A‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAAt > 1:6671405/1‑140 (MQ=255) ttGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑A‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGAtt < 1:4438265/140‑1 (MQ=255) tGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑A‑AA‑AAA‑CCTGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTa > 2:1575307/1‑140 (MQ=255) gTTTCTCCTTGACCTGAGGATAAGACCCTCTTCACATTTCGGGCAAAGAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑A‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTAc < 2:1372540/140‑1 (MQ=255) ctcCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑A‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCg < 2:2535678/140‑1 (MQ=255) ctcCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑A‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCg < 2:6689650/140‑1 (MQ=255) ccTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑A‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCa < 2:7473510/140‑1 (MQ=255) ccTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑A‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCa < 1:1120269/140‑1 (MQ=255) ttGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGTGAAGATACTTAAGAACTCAGGCCAA‑A‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGc > 2:346693/1‑140 (MQ=255) ttGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑A‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGc < 1:6136621/140‑1 (MQ=255) gACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑A‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCt < 1:8255113/140‑1 (MQ=255) aCCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑A‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTGGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCtg > 1:7451424/1‑140 (MQ=255) tgGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑A‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGAt > 2:5089634/1‑140 (MQ=255) tgGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑A‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGAt < 1:8580703/140‑1 (MQ=255) tgGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑A‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGAt < 2:6476868/140‑1 (MQ=255) tgGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑A‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGAt < 2:8243726/140‑1 (MQ=255) gggTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCC‑ACA‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGAt < 2:3969385/139‑1 (MQ=255) gTTATGACCCTCTTCACATTTCGGTCAAATAATTCGCGAAGATACTTAACAACTCAGGCCAA‑A‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCa < 2:7370741/140‑1 (MQ=255) gTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑A‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCa < 2:7643993/140‑1 (MQ=255) aTGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGTCCAA‑A‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTGACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAgtg > 1:8714047/1‑140 (MQ=255) aTGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑A‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAgtg < 2:2291016/140‑1 (MQ=255) aTGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑A‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAgtg > 2:3767404/1‑140 (MQ=255) gACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑A‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTc < 2:2756140/140‑1 (MQ=255) ccTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑A‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTa > 1:1016131/1‑140 (MQ=255) tctTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑A‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTAtt > 2:4757489/1‑140 (MQ=255) tctTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑A‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTAtt < 1:10691343/140‑1 (MQ=255) tctTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑A‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACGTCGCAGCCTGTGGATCAGTGTCGTAtt > 1:2704843/1‑140 (MQ=255) ctTCACATTTCGGGCAAATAATTCGCGAAGATCATTAAGAACTCAGGCCAA‑A‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTc > 1:2758652/1‑140 (MQ=255) ctTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑A‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTGTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTc > 1:3877910/1‑140 (MQ=255) acaTTTCGGGCAAATAATTCGCTAAGATAATTAAGAACTCAGGCCAA‑A‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGca < 1:5801762/140‑1 (MQ=255) acaTTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑A‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGca < 2:5601007/140‑1 (MQ=255) acaATTCGGGCACATCATTCGCGAAGATAAATAAGAACTCAGGCCAA‑A‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGca < 2:4356695/140‑1 (MQ=255) caTTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑A‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGA‑TACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGcaca < 2:4990982/140‑1 (MQ=255) aTTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑A‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGcaca < 1:9960803/140‑1 (MQ=255) tttCTGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑A‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAg < 2:11203603/140‑1 (MQ=255) tCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑A‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGt > 1:1420226/1‑140 (MQ=255) gggCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑A‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGcaca > 1:7940176/1‑135 (MQ=255) gggCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑A‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCt > 1:4598151/1‑140 (MQ=255) gggCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑A‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCt > 2:10497393/1‑140 (MQ=255) aatTCGCGAAGATAATTAAGAACTCAGGCCAA‑A‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCTGATAACCg < 2:8821231/140‑1 (MQ=255) atTCGCGAAGATAATTAAGAACTCAGGCCAA‑A‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCTGATAACCgg < 1:9767911/140‑1 (MQ=255) tAATTAAGAACTCAGGCCAA‑A‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCTGATAACCGGAGTTGATGACa < 1:538395/140‑1 (MQ=255) tAATTAAGAACTCAGGCCAA‑A‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCTGATAACCGGAGTTGATGACa < 2:5854827/140‑1 (MQ=255) tAAGAACTCAGGCCAA‑A‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCTGATAACCGGAGTTGATGACATGTc < 1:10501424/140‑1 (MQ=255) tAAGAACTCAGGCCAA‑A‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCTGATAACCGGAGTTGATGACATGTc < 2:4512294/140‑1 (MQ=255) aaCTCAGGCCAA‑A‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCTGATAACCGGAGTTGATGACATGTCCGGt > 1:9339576/1‑140 (MQ=255) aaCTCAGGCCAA‑A‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCTGATAACCGGAGTTGATGACATGTCCGGt < 1:5075726/140‑1 (MQ=255) aCTCAGGCCAA‑A‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCTGATAACCGGAGTTGATGACATGTCCGGTa > 1:10000466/1‑140 (MQ=255) aCTCAGGCCAA‑A‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCTGATAACCGGAGTTGATGACATGTCCGGTa > 1:4080927/1‑140 (MQ=255) aGGCCAA‑A‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCTGATAACCGGAGTTGATGACATGTCCGGTatcat > 2:6983680/1‑140 (MQ=255) aGGCCAA‑A‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCTGATAACCGGAGTTGATGACATGTCCGGTatcat > 1:770074/1‑140 (MQ=255) aGGCCAA‑A‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGACTGTGGATCATTGTCGTATTCAGCACAGGTCTGATAACCGGAGTTGATGACATGTCCGGTatcat > 2:1133651/1‑140 (MQ=255) | GCTGAAAGGAGTATACGGTATAGACCTGAGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCC‑A‑A‑AA‑AAA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCTGATAACCGGAGTTGATGACATGTCCGGTATCAT > NZ_CP025268/1826541‑1826810 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |