| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 1,855,625 | +C | intergenic (+116/‑50) | sppA → / → ansA | signal peptide peptidase SppA/asparaginase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 1,855,621 | 1 | . | C | 97.7% | 2196.3 / 37.7 | 650 | intergenic (+112/‑54) | sppA/ansA | signal peptide peptidase SppA/asparaginase |
| Reads supporting (aligned to +/- strand): ref base . (7/8); new base C (257/374); total (266/384) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.91e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 678 total aligned reads displayed.
TGCCTGACCTGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTG‑CGC‑T‑CCCC‑TGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATACCGGTG > NZ_CP025268/1855483‑1855755 | cTGACCTGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTG‑CGC‑T‑cccc < 1:7513196/140‑1 (MQ=255) cTGACCTGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTG‑CGC‑T‑cccc < 2:2245762/140‑1 (MQ=255) aCCTGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTG‑CGC‑T‑ccccctg > 2:8145147/1‑137 (MQ=255) ccTGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCACCATATTTCCTTATCCGCATAGTATCAGGTG‑CGC‑T‑ccccctgc < 2:1657784/140‑5 (MQ=255) tGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGGTCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTG‑CGC‑TCCCCC‑TGCCt < 2:9320464/140‑1 (MQ=255) tGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTG‑CGC‑TCCCCC‑TGCCt < 1:645686/140‑1 (MQ=255) tGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTG‑CGC‑TCCCCC‑TGCCt < 2:8310131/140‑1 (MQ=255) tGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTG‑CGC‑TCCCCC‑TGCCt < 2:5344470/140‑1 (MQ=255) tGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTG‑CGC‑TCCCCC‑TGCCt < 1:2947940/140‑1 (MQ=255) tGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTG‑CGC‑TCCCCC‑TGCCt < 2:3383136/140‑1 (MQ=255) tGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTGATCCGCATAGTATCAGGTG‑CGC‑TCCCCC‑TGCCt < 2:10890787/140‑1 (MQ=255) tGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCGGGTTCGCCCCATATTTCCTTATCCGCATCGTATCAGGTG‑CGC‑TCCCCC‑TGCCt < 2:11029152/140‑1 (MQ=255) tGCGCAAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTG‑CGC‑TCCCCC‑TGCCt < 2:9713471/140‑1 (MQ=255) cgcCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTG‑CGC‑TCCCCC‑TGCCTCa > 2:1244889/1‑140 (MQ=255) cgcCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTG‑CGC‑TCCCCC‑TGCCTCa > 1:3248715/1‑140 (MQ=255) cgcCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTG‑CGC‑TCCCCC‑TGCCTCa < 2:5680070/140‑1 (MQ=255) cgcCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTG‑CGC‑TCCCCC‑TGCCTCa > 2:7062573/1‑140 (MQ=255) gcCAACATGCGTTAAGTCTTGTTCTTAGTGGCCGACAGATCGTCGGCCACATTATTTTGTACGTCGACGAATCCTCTTCACGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTG‑CGC‑TCCCCC‑TGCCTCAc < 2:6010849/140‑1 (MQ=255) gcCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTG‑CGC‑TCCCCC‑TGCCTCAc > 2:154091/1‑140 (MQ=255) aaCATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTG‑CGC‑TCCCCC‑TGCCTCACGta < 2:4400105/140‑1 (MQ=255) cATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTG‑CGC‑TCCCCC‑TGCCTCACGtata < 2:3184474/140‑1 (MQ=255) aGTCTTGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTG‑CGC‑TCCCCC‑TGCCTCACGTATATACTTTTGc < 1:5027834/140‑1 (MQ=255) aGTCTTGGACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTG‑CGC‑TCCCCC‑TGCCTCACGTATATACTTTTGc < 2:10597667/140‑1 (MQ=255) gtcgtttACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTACTCCCCATATTTCCTTATCCGCATAGTATCAGGTG‑CGC‑T‑CCCCATGCATCACGTATATACTTTTGct < 2:9830659/134‑1 (MQ=255) gTCTTGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTG‑CGC‑TCCCCC‑TGCCTCACGTCTATACTTTTGct < 1:11024440/140‑1 (MQ=255) tGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTG‑CGC‑TCCCCC‑TGCCTCACGTATATACTTTTGCTCttt < 1:5294601/140‑1 (MQ=255) tACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTG‑CGC‑TCCCCC‑TGCCTCTCGTATATACTTTTGCTCTTTCg > 1:10781081/1‑140 (MQ=255) tgcgTGGCCCACAGATCGGCGGCCACATTATAGAGTACGTCGACGAATCCTCTTCCCGCTGATTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTG‑CGC‑TCCCCC‑TGCCTCACGTATATACTTTTGCTCTTTCGata < 2:8647458/137‑1 (MQ=255) tGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTG‑CGC‑TCCCCC‑TGCCTCACGTATATACTTTTGCTCTTTCGata > 2:3793424/1‑140 (MQ=255) gAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTG‑CGC‑TCCCCC‑TGCCTCACGTATATACTTTTGCTCTTTCGatat > 1:8194624/1‑140 (MQ=255) aGTGGCCGACAGATCTTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGACCCATATTTCCTTATCCGCATAGTATCAGGTG‑CGC‑TCCCCC‑TGCCTCACGTATATACTTTTTCTCTTTCGATAtc > 1:11257186/1‑140 (MQ=255) aGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTG‑CGC‑TCCCCC‑TGCCTCa > 2:4331733/1‑113 (MQ=255) aGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTG‑CGC‑TCCCCC‑TGCCTCACGTATATACTTTTGCTCTTTCGATAtc > 1:4549374/1‑140 (MQ=255) aGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTG‑CGC‑TCCCCC‑TGCCTCACGTATATACTTTTGCTCTTTCGATAtc > 1:10116956/1‑140 (MQ=255) tGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTG‑CGC‑TCCCCC‑TGCCTCACGTATATACTTTTGCTCTTTCGATAtcat > 1:8366487/1‑140 (MQ=255) aggCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACCAATCCACTAACCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTG‑CGCAC‑CCCC‑TGCCTCACGTATATACTATTGCTCTTTCGAAAtcag > 2:8993028/2‑139 (MQ=255) ggCCGACAGATCGTCGGCCACATTATTTTTTCCGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTG‑CGC‑TCCCCC‑TGCCTCACGTATATACTTTTGCTCTTTCGATAtcatt < 1:7286606/140‑1 (MQ=255) ggCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTG‑CGC‑TCCCCC‑TGCCTCACGTATATACTTTTGCTCTTTCGATAtcatt < 1:4034867/140‑1 (MQ=255) ggCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTG‑CGC‑TCCCCC‑TGCCTCACGTATATACTTTTGCTCTTTCGATAtcatt < 2:11347638/140‑1 (MQ=255) ggCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTG‑CGC‑TCCCCC‑TGCCTCACGTATATACTTTTGCTCTTTCGATAtcatt < 1:2516261/140‑1 (MQ=255) ggCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTG‑CGC‑TCCCCC‑TGCCTCACGTATATACTTTTGCTCTTTCGATAtcatt < 2:1754824/140‑1 (MQ=255) ggCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTG‑CGC‑TCCCCC‑TGCCTCACGTATATACTTTTGCTCTTTCGATAtcatt < 1:7996661/140‑1 (MQ=255) ggCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTG‑CGC‑TCCCCC‑TGCCTCACGTATATACTTTTGCTCTTTCGATAtcagt < 2:4969351/140‑3 (MQ=255) ggCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTGTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTG‑CGC‑TCCCCC‑TGCCTCACGTATATACTTTTGCTCTTTCGATAtcatt < 1:1073617/140‑1 (MQ=255) aCAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTG‑CGC‑TCCCCC‑TGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCatat < 1:8824680/140‑1 (MQ=255) aTCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTG‑CGC‑TCCCCC‑TGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCatatcaat > 2:10687186/1‑140 (MQ=255) tcgtcgGCCACATTATTTTTTCCGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTGATCCGCATAGTATCAGGTG‑CGC‑TCCCCC‑TGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCatatcaata < 2:6522161/140‑1 (MQ=255) tcgtcgGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTG‑CGC‑TCCCCC‑TGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCatatcaata < 1:7045973/140‑1 (MQ=255) gtcgGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTG‑CGC‑TCCCCC‑TGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCatatcaatatc > 1:5631074/1‑140 (MQ=255) gCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTG‑CGC‑TCCCCC‑TGCCTCACGTATATACTATTGCTCTTTCGATATCATTCATATCAATATCATGc > 1:3587853/1‑140 (MQ=255) ccACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTG‑CGC‑TCCCCC‑TGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCa < 2:8005529/140‑1 (MQ=255) tattTTTTTCGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTG‑CGC‑TCCCCC‑TGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGaa < 2:5418528/140‑1 (MQ=255) ttttttACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTG‑CGC‑TCCCCC‑TGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAAt < 1:8519939/140‑1 (MQ=255) tttACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTG‑CGC‑TCCCCC‑TGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCaa < 2:7306339/140‑1 (MQ=255) tACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCATGTG‑CGC‑TCCCCC‑TGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAAtt > 2:2762233/1‑140 (MQ=255) tACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTG‑CGC‑TCCCCC‑TGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCTTATCAATATCATGCAAAAGACATCAAtt > 1:6202711/1‑140 (MQ=255) aCGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCTGGTG‑CGC‑TCCCCC‑TGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAAttt > 2:2601252/1‑140 (MQ=255) aCGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTG‑CGC‑TCCCCC‑TGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAAttt > 2:3965969/1‑140 (MQ=255) gTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTG‑CGC‑TCCCCC‑TGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTAc < 1:555572/140‑1 (MQ=255) cgacgaATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTG‑CGC‑TCCCCC‑TGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGt > 1:8679209/1‑140 (MQ=255) ttCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTG‑CGC‑TCCCCC‑TGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACAcggg > 1:4718631/1‑140 (MQ=255) ttCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTG‑CGC‑TCCCCC‑TGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACAcggg > 2:4623577/1‑140 (MQ=255) ttCCCGCGGTTTCGCCCCATATTTCCTTATCCGCAGAGTATCAGGTG‑CGC‑TCCCCC‑TGCCTCACGTATATACTTTTGCTCTTTCGATATCAGTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACAcggg < 2:8753728/140‑1 (MQ=255) cccGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTG‑CGC‑TCCCCC‑TGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACAcgggcg < 2:5212968/140‑1 (MQ=255) cTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTG‑CGC‑TCCCCC‑TGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCACAAGAAATCAATTTACGTTGCCTACACGGGCGGGAc > 2:684660/1‑140 (MQ=255) cTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTG‑CGC‑TCCCCC‑TGCCTCACGTAGATACTTTTGCTCTTTCGATAACATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGAc < 1:5971552/140‑1 (MQ=255) ccccATATTTCCTTATCCGCATAGTATCAGGTG‑CGC‑TCCCCC‑TGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATAGCAATAGCTTGCAAAAGAAATCAATGTACGTTGCCTACACGGGCGGGACCCTCgggc > 1:3699032/1‑139 (MQ=255) ccccATATTTCCTTATCCGCATAGTATCAGGTG‑CGC‑T‑CCCCATGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATAAATTTACGTTGCCTACACGGGCGGGACCATCGGGa > 2:7798334/1‑140 (MQ=255) atatTTCCTTATCCGCATAGTATCAGGTG‑CGC‑TCCCCC‑TGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCa < 1:9962308/140‑1 (MQ=255) tatTTCCTTATCCGCATAGTATCAGGTG‑CGC‑TCCCCC‑TGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAg > 1:3479498/1‑140 (MQ=255) tCCTTATCCGCATAGTATCAGGTG‑CGC‑TCCCCC‑TGCCTCACGTATATACTTTTGCCCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGtt < 2:4176844/140‑1 (MQ=255) aTCCGCATAGTATCAGGTG‑CGC‑TCCCCC‑TGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAg < 2:5971941/140‑1 (MQ=255) aTCCGCATAGTATCAGGTG‑CGC‑TCCCCC‑TGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAg < 2:2349010/140‑1 (MQ=255) aTCCGCATAGTATCAGGTG‑CGC‑TCCCCC‑TGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAg < 1:903234/140‑1 (MQ=255) tCCGCATAGTATCAGGTG‑CGC‑TCCCCC‑TGCCTCACGTATATACTTTTGCTCTTTCGATAtcatt > 1:10058610/1‑64 (MQ=255) tCCGCATAGTATCAGGTG‑CGC‑TCCCCC‑TGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATc > 1:2353945/1‑121 (MQ=255) tCCGCATAGTATCAGGTG‑CGC‑TCCCCC‑TGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGc > 1:2099242/1‑140 (MQ=255) tCCGCATAGTATCAGGTG‑CGC‑TCCCCC‑TGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGc > 2:136493/1‑140 (MQ=255) ccGCATAGTATCAGGTG‑CGC‑TCCCCC‑TGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCa < 1:10534625/140‑1 (MQ=255) ccGCATAGTATCAGGTG‑CGC‑TCCCCC‑TGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCa < 2:1798591/140‑1 (MQ=255) ccGCATAGTATCAGGTG‑CGC‑TCCCCC‑TGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCa < 1:9571942/140‑1 (MQ=255) cgaaTAGTATCAGGTG‑CGC‑TCCCCC‑TGCCTCACGTATATACTTTTGCTCTTTCGATATAATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAg < 2:7576343/137‑1 (MQ=255) cATAGTCTCAGGTGCCCC‑C‑CCCC‑CGCCTCACGTAAATACTATTGCTCTCACGATCTCAATCATATCAAAATCATGAAAAATAAATCAATTTACGTTGCCTTCACGGGCGGGACCATCGGGATGCAGCGTTCAGAGCAggg < 2:6388349/140‑1 (MQ=255) cATAGTATCAGGTG‑CGC‑TCCCCC‑TGCCTCACGTATATACTTTTGCTCTTTCGATATCCTTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAggg < 1:9291353/140‑1 (MQ=255) cATAGTATCAGGTG‑CGC‑TCCCCC‑TGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAggg < 2:3730942/140‑1 (MQ=255) aTAGTATCAGGTG‑CGC‑TCCCCC‑TGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGt > 1:142442/1‑140 (MQ=255) cgTAGCAGGTG‑CGC‑TCCCCC‑TGCCTCACGTATATACTTTTGCTCTATCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCGACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTta < 2:7368222/139‑1 (MQ=255) aGTATCAGGTG‑CGC‑TCCCCC‑TGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACAcggg < 1:6677035/104‑1 (MQ=255) tCAGGTG‑CGC‑TCCCCC‑TGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTtatata > 2:10392655/1‑140 (MQ=255) tCAGGTG‑CGC‑TCCCCC‑TGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTtatata < 1:383944/140‑1 (MQ=255) cAGGTG‑CGCGC‑CCCC‑TGCCTCAAGTATATCCTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTGACGTGGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATAc < 2:10171407/140‑1 (MQ=255) cAGGTG‑CGC‑TCCCCC‑TGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATAc < 1:10342031/140‑1 (MQ=255) ggTG‑CGC‑TCCCCC‑TGCCTCACGTATATACTTTTGCTCTTTCGATCTCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATACCg > 1:11470447/1‑140 (MQ=255) ggTG‑CGC‑TCCCCC‑TGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATACCg > 2:3274507/1‑140 (MQ=255) ggTG‑CGC‑TCCCCC‑TGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATACCg > 2:8474337/1‑140 (MQ=255) ggTG‑CGC‑TCCCCC‑TGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATACCg > 1:4336028/1‑140 (MQ=255) gTG‑CGC‑TCCCCC‑TGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATACCgg > 1:2633640/1‑140 (MQ=255) g‑cgc‑TCCCCC‑TGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAATGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATACCGgtg > 1:186199/1‑140 (MQ=255) g‑cgc‑TCCCCC‑TGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAATGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTAGATACCGgtg > 1:4824693/1‑140 (MQ=255) g‑cgc‑TCCCCC‑TGCCTCACGTATATACTTTTGCTCTTTCGATATCAGTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATACCGgtg > 1:315733/1‑140 (MQ=255) | TGCCTGACCTGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTG‑CGC‑T‑CCCC‑TGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATACCGGTG > NZ_CP025268/1855483‑1855755 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |