| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 2,204,490 | (A)7→8 | pseudogene (175/3632 nt) | CXP41_RS11705 → | DUF4132 domain‑containing protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 2,204,483 | 1 | . | A | 93.2% | 1923.9 / 115.6 | 542 | pseudogene (168/3632 nt) | CXP41_RS11705 | DUF4132 domain‑containing protein |
| Reads supporting (aligned to +/- strand): ref base . (19/18); new base A (284/219); total (304/238) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.08e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 580 total aligned reads displayed.
ATAACGCCCAACTGGAACTGAAATATAAAAAAGGCAAAACGCCGCTCAGTCATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAG‑A‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGGCGGCGCTAGCCTGTATCGCG > NZ_CP025268/2204344‑2204617 | cGCCCAACTGGAACTGAAATATAAAAAAGGCAAAACGCCGCTCAGTCATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGACTTGCTACAAAAAGCTGAGAAG‑a‑a‑aa > 2:6305531/1‑140 (MQ=255) gCCCAACTGGAACTGAAATATAAAAAAGGCAAAACGCCGCTCAGTCATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAG‑a‑a‑aa‑a < 1:6142305/140‑1 (MQ=255) aCTGGAACTGAAATATAAAAAAGGCAAAACGCCGCTCAGTCATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAG‑a‑a‑aa‑aaaaca < 2:1163842/140‑4 (MQ=255) aCTGGAACTGAAATATAAAAAAGGCAAAACGCCGCTCAGTCATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAG‑a‑a‑aa‑aaaaca > 2:1990082/1‑137 (MQ=255) aCTGGAACTGAAATATAAAAAAGGCAAAACGCCGCTCAGTCATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAG‑a‑a‑aa‑aaaaca < 2:5149026/140‑4 (MQ=255) cTGGAACTGAAATATAAAAAAGGCAAAACGCCGCTCAGTCATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGAGGAATTGCTACAAAAAGCTGAGAAG‑a‑a‑aa‑aaaacat > 1:960852/1‑136 (MQ=255) gAACTGAAATATAAAAAAGGCAAAACGCCGCTCAGTCATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGAA‑A‑AA‑AAACATTGt > 1:8344757/1‑140 (MQ=255) gAACTGAAATATAAAAAAGGCAAAACGCCGCTCAGTCATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGAA‑A‑AA‑AAACATTGt < 2:865979/140‑1 (MQ=255) gAAATATAAAAAAGGCAAAACGCCGCTCAGTCATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGAA‑A‑AA‑AAACATTGTCTGGc < 1:5913905/140‑1 (MQ=255) aaTATAAAAAAGGCAAAACGCCGCTCAGTCATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGAA‑A‑AA‑AAACATTGTCTGGCGt > 2:1560846/1‑140 (MQ=255) taAAAAAGGCAAAACGCCGCTCAGTCATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGAA‑A‑AA‑AAACATTGTCTGGCGTTATg > 2:7487597/1‑140 (MQ=255) gCAAAACGCCGCTCAGTCATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAAtttt > 1:4915460/1‑140 (MQ=255) accgccgcTCAGTCATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCAc < 2:10524274/138‑1 (MQ=255) accgccgcACAGACCTCGTCGCTGGCCGGGCGAACCAGTGTCCGTTAACACTGGAAGTCTCATCCAGACATTGGGGGATGAATTGCTACAAAAAGCTGAGAAGAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTGTTCAc < 2:9629959/138‑1 (MQ=255) cgcTCAGTCATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAg < 1:775982/140‑1 (MQ=255) gcTCAGTCATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGt > 1:4291018/1‑140 (MQ=255) tCAGTCATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTgg < 2:4020102/140‑1 (MQ=255) tCAGTCATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTgg < 2:3332891/140‑1 (MQ=255) tCAGACATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGAA‑A‑AA‑AAACATTGTCGGGCGTTATGAGAATTTTTCACTGGAGTgg < 1:6616105/140‑1 (MQ=255) aGTCCTCGTCGCGGGCCGGGCGAACCCGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTCCAACAAGCTGAGAAGAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCa < 1:7824621/140‑1 (MQ=255) gtcgCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGcc < 2:4980058/140‑1 (MQ=255) tcgCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCa < 1:2195724/140‑1 (MQ=255) gCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATc > 2:5216432/1‑140 (MQ=255) gCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATc > 1:10974162/1‑140 (MQ=255) tGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCCGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCAc > 2:2440005/1‑140 (MQ=255) tGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCAc > 2:11079123/1‑140 (MQ=255) gCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGc < 2:10044732/140‑1 (MQ=255) ccGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCa < 1:10439929/140‑1 (MQ=255) cGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAg > 2:1723516/1‑140 (MQ=255) ggCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGc > 1:2019441/1‑140 (MQ=255) gCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGcc < 1:11141346/140‑1 (MQ=255) aaCCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCagc > 2:6544599/1‑138 (MQ=255) ccAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCaa > 2:297614/1‑140 (MQ=255) cAGTGCCCGTGATCACTGGAAGTCTCATCCAGACATGGGGTGATGAATTGCTCCAAAAAGCGGAGCAGAA‑A‑AA‑AAACAGTCACGGGCGTGATGAGACATTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAAc < 2:6007820/140‑1 (MQ=255) gtCCGTTATCACTGGAAGTCTCATCCTGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAG‑A‑ATAA‑AAACCTTGTCTGGCGGTATGAGACTTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCTCCTTGa > 1:6425057/1‑140 (MQ=255) gtCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAACAGCTGAGAAGAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGa < 1:8854334/140‑1 (MQ=255) gtCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGa < 2:9862794/140‑1 (MQ=255) gtCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGa > 1:10846841/1‑140 (MQ=255) cGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACATGATCg > 2:778852/1‑140 (MQ=255) ttATCACTGGAAGTCTCATCCAGACATTGGGTGATGTATTGCTACAAAAAGCTGAGAAGAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGc < 2:8206616/140‑1 (MQ=255) ttATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAACAGCTGAGAAGAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGc < 1:2909453/140‑1 (MQ=255) tATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCg > 1:9519207/1‑140 (MQ=255) tCACTGGAAGTCTCATCCAGACTTTGGGTGATGAATTGCTACAAAAAGCTGAGAAGAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGaa < 2:3891628/140‑1 (MQ=255) cTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGGTCGGCGAacac > 1:2551273/1‑140 (MQ=255) cTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAacac > 2:4690361/1‑140 (MQ=255) cTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAacac > 1:8738291/1‑140 (MQ=255) ggAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACaa > 2:2580819/1‑140 (MQ=255) ggAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACaa > 2:6655351/1‑140 (MQ=255) ggAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAG‑ACA‑AA‑AAACATTGTCTTGCTTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCAATAACGCAGGCCATCAACTTGATCGGCGAACACaa < 2:3117069/140‑1 (MQ=255) ggAAGTCTCATCCAGACATTGGGTGAGGAATTGCTACAATAAGCTGAGAAGAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCTGTCCGCCATCACACAGGCCATCTACTTGATCGGCGAACACaa > 2:6199304/1‑140 (MQ=255) tctcATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCt < 2:10756275/140‑1 (MQ=255) tctcATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCt > 1:10132492/1‑140 (MQ=255) ctcATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCATCTTGATCGGCGAACACAAACCCTc > 1:1854078/1‑140 (MQ=255) tcATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCTCGCAGGCCAGCTACTTGATCGGCGAACTCAAGCCCTCa > 1:9300649/1‑140 (MQ=255) aTCCAGACATTGGGTGATGAATTGCTACCAAAAGCTGAGAAGAA‑A‑AA‑AAAAAGTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTAGATCGGCGAACACAAACCCTCAAt > 2:2880672/1‑140 (MQ=255) tCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATc < 2:6976891/140‑1 (MQ=255) aCATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATcccggc > 2:7641423/1‑140 (MQ=255) aCATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATcccggc < 1:9023020/140‑1 (MQ=255) aCATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATcccggc > 1:3643798/1‑140 (MQ=255) aCATTGGGTGATGAATTGCTACAAAAAGCTGAGAAG‑a‑a‑aa‑a > 2:3709866/1‑41 (MQ=255) aTTGGGTGATGAATTGCTACAAAAAGCTGAGAAGAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATcccggccc > 1:5290468/1‑140 (MQ=255) tGGGTGATGAATTGCTACAAAAAGCTGAGAAGAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATcccggcccgg > 1:180372/1‑140 (MQ=255) tGGGTGATGAATTGCTACAAAAAGCTGAGAAGAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATcccggcccgg > 2:10878581/1‑140 (MQ=255) tGGGTGATGAATTGCTACAAAAAGCTGAGAAGAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATcccggcccgg > 2:5744744/1‑140 (MQ=255) gggTGATGAATTGCTCCAAAAAGCTGAGAAG‑A‑A‑AATAAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGGCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAATCCCTCAATCCCGGCCCGGa > 1:4654054/1‑140 (MQ=255) ggTGATGAATTGCTACAAAAAGCTGAGAAGAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGAc > 2:1218869/1‑140 (MQ=255) gTGATGAATTGCTACAAAAAGCTGAGAAGAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACa > 2:1035222/1‑140 (MQ=255) atgaATTGCTACAAAAAGCTGAGAAGAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATg > 1:5634647/1‑140 (MQ=255) atgaATTGCTACAAAAAGCTGAGAAGAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATg > 1:3711854/1‑140 (MQ=255) atgaATTGCTACAAAAAGCTGAGAAGAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATg > 1:2392812/1‑140 (MQ=255) tgaATTGCTACTAAAAGCTGATAAGAA‑A‑AA‑AAACATTGTCTGTCGTTATGAGAATTGTTGACTGGAGTGGCTGTCCGGCATCACGCAGGCCATCAACTTGTTAGGCGAAGAGATACGCTCAATCACGGCCCGGAccagtg > 2:7186372/1‑135 (MQ=255) tgaATTGCTACAAAAAGCTGAGAAGAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATgg < 1:5805775/140‑1 (MQ=255) tgaATTGCTACAAAAAGCTGAGAAGAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATgg > 1:10636101/1‑140 (MQ=255) tgaATTGCTACAAAAAGCTGAGAAGAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATgg < 1:9923693/140‑1 (MQ=255) tgaATTGCTACAAAAAGCTGAGAAGAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATgg > 1:2995799/1‑140 (MQ=255) gaATTGCTACAAAAAGCTGAGAAGAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATggc > 1:7306529/1‑140 (MQ=255) tGCTACTAAAAGCTGAGACGAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGgcggcg < 2:8903543/140‑1 (MQ=255) tGCTACCAAAAGCTGAGATGAA‑A‑AA‑AAAGCTTCTCGGGCGTTATCAGAATTTTTCCCTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGgcggcg < 2:7269477/140‑1 (MQ=255) tGCTACAAACAGCTGAGAAG‑ACA‑AA‑AAACAGTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGgcggcg < 1:3280410/140‑1 (MQ=255) tGCTACAAAAAGCTGAGACG‑ACA‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGgcggcg < 1:8212725/140‑1 (MQ=255) tGCTACAAAAAGCTGAGAAGAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGgcggcg < 1:10060425/140‑1 (MQ=255) tGCTACAAAAAGCTGAGAAGAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGgcggcg < 1:1600849/140‑1 (MQ=255) tGCTACAAAAAGCTGAGAAGAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGgcggcg < 1:1150364/140‑1 (MQ=255) tGCTACAAAAAGCTGAGAAGAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGgcggcg < 2:9195087/140‑1 (MQ=255) tGCTACAAAAAGCTGAGAAGAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGgcggcg > 1:10346354/1‑140 (MQ=255) tGCTACAAAAAGCTGAGAAGAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGgcggcg < 2:5578290/140‑1 (MQ=255) tGCTACAAAAAGCTGAGAAGAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGgcggcg < 1:3450171/140‑1 (MQ=255) tGCTACAAAAAGCTGAGAAGAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGgcggcg > 1:3837757/1‑140 (MQ=255) tGCTACAAAAAGCTGAGAAGAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGgcggcg < 2:3374565/140‑1 (MQ=255) tGCTACAAAAAGCTGAGAAGAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGgcggcg < 1:5116665/140‑1 (MQ=255) tGCTACAAAAAGCTGAGAAGAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGgcggcg > 2:2256396/1‑140 (MQ=255) tGCTACAAAAAGCTGAGAAGAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGgcggcg < 1:909659/140‑1 (MQ=255) cTACAACAAGCTGAGAAGAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGACCACCAACCCTCCATCCCGGCCCGGACAATGGCGgcgcg > 2:10200263/1‑139 (MQ=255) cTACAAAAAGCTGAGAAGAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGGCGGCGCt > 1:135151/1‑140 (MQ=255) cTACAAAAAGCTGAGAAGAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGGCGGCGCt > 1:7537085/1‑140 (MQ=255) cAAAAAGCTGAGAAGAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGGCGGCGCTAGc > 1:4103937/1‑140 (MQ=255) cTGAGAAGAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGACCACAAACCCTCAATCACGGCCCGGACAATGGCGGCGCTAGCCTGTATc > 2:1419542/1‑140 (MQ=255) cTGAGAAGAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGgcggcg > 1:7033629/1‑128 (MQ=255) cTGAGAAGAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTAACTGGAGTGGCAGTCCGCCATCACGCAGGACATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGGCGGCGCTAGCCTGTATc > 2:4258316/1‑140 (MQ=255) agaagaA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGGCGGCGCTAGCCTGTATcgcg > 2:5449249/1‑140 (MQ=255) | ATAACGCCCAACTGGAACTGAAATATAAAAAAGGCAAAACGCCGCTCAGTCATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAG‑A‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGGCGGCGCTAGCCTGTATCGCG > NZ_CP025268/2204344‑2204617 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |