| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 2,466,923 | (C)8→9 | intergenic (+242/‑123) | fadL → / → CXP41_RS12955 | long‑chain fatty acid transporter FadL/protein YfdF |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 2,466,915 | 1 | . | C | 91.6% | 795.6 / 70.6 | 263 | intergenic (+234/‑131) | fadL/CXP41_RS12955 | long‑chain fatty acid transporter FadL/protein YfdF |
| Reads supporting (aligned to +/- strand): ref base . (1/21); new base C (40/199); total (41/222) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.17e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 337 total aligned reads displayed.
TTGCAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑C‑CCCCC‑C‑C‑TGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTAATATATATTTGTAACAAATCAATCAAAATGGAATAAAATCATG > NZ_CP025268/2466778‑2467048 | ttGCAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑c‑c < 1:10765211/140‑1 (MQ=255)ttGCAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑c‑c > 2:6679073/1‑140 (MQ=255)ttGCAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑c‑c > 2:3714070/1‑140 (MQ=255)ttGCAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑c‑c < 1:3120828/140‑1 (MQ=255)ttGCAAACAGCCTGTTGGCAGCTTGCCCGAACAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑c‑c < 1:6773404/140‑1 (MQ=255) tGCAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑c‑cc < 1:11413169/140‑1 (MQ=255) tGCAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑c‑cc < 2:505051/140‑1 (MQ=255) tGCAAACAGCCTGTTGGCAGCTTGCCCATACAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑c‑cc < 1:9670364/140‑1 (MQ=255) gtcAAACACCCTGAGGGCAGCTTGCCCAATCAAAACAATAAGCGCTATCCACAGCCAACCCTCAAGGCAAATGCATAAATTCAGGCTTTCTGCTAGTGCTACTCAAAGATTTTACTTTCCTGCATTTCCAGGATACT‑c‑cc < 2:8453874/138‑1 (MQ=255) tcAAACAGCCTGTTGGCATCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑c‑ccc < 2:9761822/139‑1 (MQ=255) gCAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑c‑ccc < 2:10206390/140‑1 (MQ=255) cAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑c‑cccc < 1:7580586/140‑1 (MQ=255) cAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑c‑cccc < 1:11015907/140‑1 (MQ=255) aaCAGCCTGTTGGCAGCTTGCCCTTTCAACTCAATCAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑c‑ccccc‑c < 2:7300138/140‑1 (MQ=255) aaCAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATACGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑c‑ccccc‑c < 1:5749956/140‑1 (MQ=255) aaCAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAATGCATATTGTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑c‑ccccc‑c < 2:5984285/140‑1 (MQ=255) cAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATCAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑c‑ccccc‑c‑cc < 2:222328/140‑2 (MQ=255) cAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAACGAGTTTACTTTTCTGCATTTCCAGGATACT‑c‑ccccc‑c‑cc < 1:418769/140‑2 (MQ=255) cAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCGGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑c‑ccccc‑c‑cc < 2:143653/140‑2 (MQ=255) ccTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAATAGTTTACTTTTCTGCATTTCCAGGATACT‑c‑ccccc‑c‑cctgg < 2:2508014/140‑5 (MQ=255) ccTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑c‑ccccc‑c‑cctgg < 2:3521058/140‑5 (MQ=255) ccTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑c‑ccccc‑c‑cctgg < 1:6788842/140‑5 (MQ=255) ccTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑c‑ccccc‑c‑cctgg < 1:7499174/140‑5 (MQ=255) ccTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑c‑ccccc‑c‑cctgg < 1:3811109/140‑5 (MQ=255) ccTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑c‑ccccc‑c‑cctgg < 1:250890/140‑5 (MQ=255) cTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑c‑ccccc‑c‑cctggc > 1:7901500/1‑135 (MQ=255) tGTTGGCAGCTTGCCCTTTCAAATCAATAACCGGTATCCACAGCCAAACCTGAAGGGAAAGGCTTATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTCC‑CCCCC‑C‑C‑TGGCt < 2:10765625/140‑1 (MQ=255) cAGCTTGCCCTTTCAACTCAATCAGCGGTATCCACAGACAAACCTCCAGGGAAAGGCATATTTGCAGGCGTTCTGCTCGTCCTTCTCAAACAGTTTACTTTTCTGCATTTCCAGGATACTCC‑CCCCC‑C‑C‑TGGCTATtgtg < 2:8375567/140‑1 (MQ=255) cAGCTTGCCCTTTCAACTCAATACGCGGTAACCACAGACAAACCTGAAGGTAAAGGCATATTTTCAGGCGGTCTGCTCGTCCTTCTCAATGAGTTTACTTTTCTGCATTTACAGTATACTCC‑CCCCC‑C‑C‑TGGCTATtgtg < 2:11335085/140‑1 (MQ=255) cAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGATGGGAAAGGCATATTTTCAGGAGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTATGCATTTCCAGGATACTCC‑CCCCC‑C‑C‑TGGCTATtgtg < 1:3962701/140‑1 (MQ=255) cAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTCC‑CCCCC‑C‑C‑TGGCTATtgtg < 1:9257714/140‑1 (MQ=255) cAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTCC‑CCCCC‑C‑C‑TGGCTATtgtg < 2:6474353/140‑1 (MQ=255) cAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTCC‑CCCCC‑C‑C‑TGGCTATtgtg < 1:10480285/140‑1 (MQ=255) cAGCTTGCCCTGTCAAATCAATACGCGGTATAAACTGACAAACCTGAAGGGAAAGGAATAGTTTCAGGCTTTCTGATCGTCCTTCTCAACTATTTTAATTTTCTGAATTTCCAGTATAAT‑C‑CCCCCAC‑C‑TGGCTATtgtg < 2:2019374/140‑1 (MQ=255) cAGCTTGCCCATTCAAATCAATCAGCGGTATCCACAGACAACCCTGAAGGGAAAGGCATATGTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTCC‑CCCCC‑C‑C‑TGGCTATtgag < 2:4796059/140‑3 (MQ=255) gCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACACACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTCC‑CCCCC‑C‑C‑TGGCTATTGTgcg < 2:10570082/140‑1 (MQ=255) gCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTCC‑CCCCC‑C‑C‑TGGCTATTGTgcg < 1:1505619/140‑1 (MQ=255) gCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTCC‑CCCCC‑C‑C‑TGGCTATTGTgcg > 2:4165587/1‑140 (MQ=255) gCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTCC‑CCCCC‑C‑C‑TGGCTATTGTgcg < 1:4704384/140‑1 (MQ=255) gCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTGACTTTTCTGCATTTCCAGGATACTCC‑CCCCC‑C‑C‑TGGCTATTGTgcg < 2:2384060/140‑1 (MQ=255) ccTTGCCCTCTCAAATCAATAACCGGTATCCACAGACAAACCAGAAGCGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAACAGTTTACTTTTCTGCATTTCCAGGATACTCC‑CCCCC‑C‑C‑GGGCTATTGTgcg < 1:8179743/139‑1 (MQ=255) tttCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTCC‑CCCCC‑C‑C‑TGGCTATTGTGCGCTCATaca > 2:7523786/1‑140 (MQ=255) tCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTCC‑CCCCC‑C‑C‑TGGCTATTGTGCGCTCATACACt < 2:7611777/140‑1 (MQ=255) tCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCATTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTCC‑CCCCC‑C‑C‑TGGCTATTGTGCGCTCATACACt < 2:11108857/140‑1 (MQ=255) cAAATCAATAAGCGTTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTCC‑CCCCC‑C‑C‑TGGCTATTGTGCGCTCATACACTc < 2:1288936/140‑1 (MQ=255) cAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTCC‑CCCCC‑C‑C‑TGGCTATTGTGCGCTCATACACTc < 1:3446497/140‑1 (MQ=255) aTCAATAATCGGTATCCACAGACAAACCTGACGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTCC‑CCCCC‑C‑C‑TGCCTATTGTGCGCTCATACACTCaac < 2:2750420/140‑2 (MQ=255) aTCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTCC‑CCCCC‑C‑C‑TGGCTATTGTGCGCTCATACACTCaaa < 1:6339579/140‑1 (MQ=255) aGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTCC‑CCCCC‑C‑C‑TGGCTATTGTGCGCTCATACACTCAAATTAAAGa < 1:6170205/140‑1 (MQ=255) gCGGTATCCACAGACAAACCTGAATGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTCC‑CCCCC‑C‑C‑TGGCTATTGTGCGCTCATACACTCAAATTAAAGAt < 2:5216658/140‑1 (MQ=255) gCGGTATCCACAGACAAACCTGAAGGGACAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTCC‑CCCCC‑C‑C‑TGGCTATTGTGCGCTCATACACTCAAATTAAAGAt < 2:6780918/140‑1 (MQ=255) gCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCTTTCTGCACGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTCC‑CCCCC‑C‑C‑TGGCTATTGTGCGCTCATACACTCAAATTAAAGAt < 2:1199365/140‑1 (MQ=255) gCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTCC‑CCCCC‑C‑C‑TGGCTATTGTGCGCTCATACACTCAAATTAAAGAt < 1:43092/140‑1 (MQ=255) gCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTCC‑CCCCC‑C‑C‑TGGCTATTGTGCGCTCATACACTCAAATTAAAGAt < 2:4033125/140‑1 (MQ=255) gCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTCC‑CCCCC‑C‑C‑TGGCTATTGTGCGCTCATACACTCAAATTAAAGAt < 2:3934746/140‑1 (MQ=255) gCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTCC‑CCCCC‑C‑C‑TGGCTATTGTGCGCTCATACACTCAAATTAAAGAt < 2:5553872/140‑1 (MQ=255) gTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTATCAAAGAGTTTACTTTTCTGCATTTCCATGATACT‑C‑CCCCC‑CAC‑TGGCTATTGTGCGCTAATACACTCAAATTAAAGATAgg < 2:42637/140‑1 (MQ=255) tATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTCC‑CCCCC‑C‑C‑TGGCTAGTGGGCGCTCATACACACAAATTAAAGATAGGt > 1:4744167/1‑140 (MQ=255) tCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTCC‑CCCCC‑C‑C‑TGGCTATTGTgcg > 1:5300830/1‑112 (MQ=255) aCAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTCC‑CCCCC‑C‑C‑TGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCtaa > 2:7130804/1‑136 (MQ=255) aCAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTCC‑CCCCC‑C‑C‑TGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCtaa < 1:7130310/136‑1 (MQ=255) cAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTCC‑CCCCC‑C‑C‑TGGCTAGTGTGCGCTCATACACTCAAATTAAAGATAGGGTCtaaataat > 1:8223051/1‑139 (MQ=255) aaCCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTCC‑CCCCC‑C‑C‑TGGCTATTGTGCGCTCATac < 1:558427/109‑1 (MQ=255) aCCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTCC‑CCCCC‑C‑C‑TGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGa > 1:855946/1‑140 (MQ=255) ccTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTCC‑CCCCC‑C‑C‑TGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAg < 1:1500015/140‑1 (MQ=255) ccTGAAGGGAAAGCCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTTCATTTCCAGGATACT‑C‑CCCCC‑C‑CATGTCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAg < 2:6032439/140‑1 (MQ=255) tGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTCC‑CCCCC‑C‑C‑TGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCg < 1:7232813/140‑1 (MQ=255) tGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTCC‑CCCCC‑C‑C‑TGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCg < 2:8853030/140‑1 (MQ=255) gAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTCC‑CCCCC‑C‑C‑TGGCTATTGTGCGCTCATACACTCAAATTAAATATAGGTTATAAATAAATGAGCGt > 2:579790/1‑140 (MQ=255) aaGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTCCATTTCCAGGAGACTCC‑CCCCC‑C‑C‑TGGCTAGTGTGCGCTCATACACTCAAATGAAAGATCGGTTCTAAATAAATGAGCGTTTTTTGa < 2:4633749/140‑1 (MQ=255) aGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTCC‑CCCCC‑C‑C‑TGGCTATtg > 1:5981457/1‑85 (MQ=255) aGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTCC‑CCCCC‑C‑C‑TGGCTATTGTGCGCTCATACACTCAAATAAAAGATAGGTTCTAAATAAATGAGCGTTTTTTgtt > 1:2647099/1‑138 (MQ=255) ggCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTCC‑CCCCC‑C‑C‑TGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATACATGAGCGTTTTTTGATa < 1:1130304/140‑1 (MQ=255) ggCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTCC‑CCCCC‑C‑C‑TGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATa < 1:2915632/140‑1 (MQ=255) ggCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTCC‑CCCCC‑C‑C‑TGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATa < 1:8791724/140‑1 (MQ=255) ggCATATTGTCAGGCGTACGGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTCC‑CCCCC‑C‑C‑TGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATa < 2:10094425/140‑1 (MQ=255) tatTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTCC‑CCCCC‑C‑C‑TGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCt < 1:2259471/140‑1 (MQ=255) atTTTCATGAGTTCTGCTCGACCTTCTCAAATAGTTTACTTTTCTGCATTTCCAGGATACTAC‑CCCCC‑C‑C‑TGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAACTGAGCGTTTTTTGATAGTCTa < 2:6169296/140‑1 (MQ=255) atTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTCC‑CCCCC‑C‑C‑TGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTa < 1:6633159/140‑1 (MQ=255) cAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTCC‑CCCCC‑C‑C‑TGGCTATTGTGCGCTCATACACTCAAATTACAGATAGGTTCTAAATAAATGATCGTTTTTTGATAGTCTATTTCa < 1:5902577/140‑1 (MQ=255) cAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTCC‑CCCCC‑C‑C‑TGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCa < 2:8721567/140‑1 (MQ=255) cAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTCC‑CCCCC‑C‑C‑GGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCa < 2:3239299/140‑1 (MQ=255) aGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTCC‑CCCCC‑C‑C‑TGGCTATTGTGCGCTCATACACTCAAATTAAAGAt > 2:8192660/1‑99 (MQ=255) aGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTCC‑CCCCC‑C‑C‑TGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCa < 1:947421/139‑1 (MQ=255) aGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑c‑ccccc‑c < 1:4992118/62‑1 (MQ=255) tgCGTTCTGCTCGTCCTTCACAAAGAGTTTAATTTTATGCATTTACATGATACTCC‑CCCCC‑C‑C‑TGGCTATTGTGCGCTCATACACTCAAATTAAATATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTAGTTCAtt < 2:6990431/139‑1 (MQ=255) ggCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTCC‑CCCCC‑C‑C‑TGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCAtt < 1:1845762/140‑1 (MQ=255) ggCGTTCTGCTCGTCCTTCTCAAAGAGATTACTTTTCTGCAATTCCAGGATACTCC‑CCCCC‑C‑C‑TGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCAtt < 1:7769891/140‑1 (MQ=255) gTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTCC‑CCCCC‑C‑C‑TGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAgg < 2:5270019/140‑1 (MQ=255) cTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTCC‑CCCCC‑C‑C‑TGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTAatat < 1:10191857/140‑1 (MQ=255) cGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTCC‑CCCCC‑C‑C‑TGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTAatatat < 1:904152/140‑1 (MQ=255) tCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACTCC‑CCCCC‑C‑C‑TGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAg > 1:6117380/1‑129 (MQ=255) ctcAAAGAGTTTACTTTTCTGCATTTCCAGGATACTCC‑CCCCC‑C‑C‑TGGCTATTGTGCTCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTAATATATATTTGTa < 1:3714071/140‑1 (MQ=255) agagTTTACTTTTCTGCATTTCCAGGATACTCC‑CCCCC‑C‑C‑TGGCTATTGTGCGCTCATACACTCAAATTAAAGATATGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTAATATATATTTGTAActac < 2:495736/140‑4 (MQ=255) gTTTACTTTTCTGCATTTCCAGGATACTCC‑CCCCC‑C‑C‑TGGCTATTGTGCGCGCATACACTCAAATTAAAGATAGGTTATAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTAAGATATATTTGTAACAaatca > 1:4067627/1‑140 (MQ=255) ttACTTTTCTGCATTTCCAGGATACTCC‑CCCCC‑C‑C‑TGGCTATtgtg < 2:7900341/46‑1 (MQ=255) tACTTTTCTGCATTTCCAGGATACTCC‑CCCCC‑C‑C‑TGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATa < 2:9205874/99‑1 (MQ=255) tttCTGCATTTCCAGGATACT‑C‑CCCCC‑C‑CATGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTAATATATATTTGTAACAAATCAATCaaaa < 2:2938892/140‑1 (MQ=255) tttCTGCATTTACAGTATTCT‑CGCCACC‑C‑A‑TGGATTTTGTGAGATAATACACTCAACTTAAACATATGTTCTAAATAAATTAGCGTTTTTTGATAGTCTAATTCATTAGTTAATATATATTTGTAACAAATCAATCaaaa < 2:9575835/140‑1 (MQ=255) gATACTCC‑CCCCC‑C‑C‑TGGCAATTGTGCGCGAATACACTCAAAACAAAGATACGTTCAAAATAACTGACCGTTTTTTGATAGTCTATTTCATTATGTAATAGAGATGTGTAACAAATCAATCAAAATGGAATAAAATCaag < 2:1763242/140‑3 (MQ=255) | TTGCAAACAGCCTGTTGGCAGCTTGCCCTTTCAAATCAATAAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATACT‑C‑CCCCC‑C‑C‑TGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTAATATATATTTGTAACAAATCAATCAAAATGGAATAAAATCATG > NZ_CP025268/2466778‑2467048 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |