| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 2,769,852 | +C | intergenic (‑52/‑89) | yfjM ← / → rnlA | DUF1524 domain‑containing protein/type II toxin‑antitoxin system toxin mRNA endoribonuclease RnlA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 2,769,848 | 1 | . | C | 95.3% | 1798.5 / 76.6 | 563 | intergenic (‑48/‑93) | yfjM/rnlA | DUF1524 domain‑containing protein/type II toxin‑antitoxin system toxin mRNA endoribonuclease RnlA |
| Reads supporting (aligned to +/- strand): ref base . (11/15); new base C (212/321); total (224/339) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.39e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 588 total aligned reads displayed.
TCTTGTCTGCTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TG‑CCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCAGGAGTTACAAAAACTTAAATCTGGTCAGGGCA > NZ_CP025268/2769710‑2769982 | cTTGTCTGCTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TG‑cc < 1:3829241/140‑1 (MQ=255) cTTGTCTGCTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TG‑cc < 1:1352092/140‑1 (MQ=255) cTTGTCTGCTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TG‑cc < 2:2475584/140‑1 (MQ=255) ttGTCTGCTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TG‑ccc < 1:10076090/140‑1 (MQ=255) tGTCTGCTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TG‑cccc < 2:3765875/140‑1 (MQ=255) tGTCTGCTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TG‑cccc < 1:3094697/140‑1 (MQ=255) aCTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCCTATTCAGGTGGCTAAAtt > 2:9612308/1‑140 (MQ=255) aCTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCCTATTCAGGTGGCTAAAtt > 1:2554235/1‑140 (MQ=255) caggaTCGAGGTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGCTGGACATCAGCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCGATAGTTGGAG‑TGCCCCCTATTCAGGTGGCTAACTTTAg < 2:4905800/136‑1 (MQ=255) caGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCCTATTCAGGTGGCTAAATTTAg < 1:7920106/139‑1 (MQ=255) acgtctCGAGTTGCTGCTTGGTGCGATCACGACGCGGTTTCCGATTCGATGGACATCATCCACCATTTTGTGGACTGCCCCACCGGTAGACGATCATTCACGAACCATTGAGTTC‑CCCCTATTCATGTGGCTAAATTTAg < 2:882449/135‑1 (MQ=255) acgTAGCGAGTTGCTGCTGGGTGAGATCAGGACGAGGATACCGAAACGATGGACATCCTCCCCCATTGTGTGGACTGCCCCCCCGGTAGAAGCTCCTGCCCTATCGTTGGAG‑TGCCCCCTAGGCAGGTGGCTAAAGTTAg < 2:11300244/138‑1 (MQ=255) aaGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCCTATTCAGGTGGCTAAATTTAg < 2:2643288/140‑1 (MQ=255) gTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCCTATTCAGGTGGCTAAATTTAGCa < 1:2897114/140‑1 (MQ=255) gTATCGAGGTGCTGCTTGGTGAGATCCGGAAGAGGTGACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCNGGTAGACGATCCTGCCCTATAGTTGGGG‑TGCCCCCTATTCAGGTGGCTANATTTAGCa < 1:6058381/140‑1 (MQ=255) tCGAGTTGCTGCTTTGTGAGATCAGGAAGAGGTTACCGAATCGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCCTATTCAGGTGGCTAAATTTAGCAAAt < 2:6703062/140‑1 (MQ=255) tCGAGTTGCTGCTTGGTGAGATCAGGATGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCCTATTCAGGTGGCTAAATTTAGCAAAt < 2:2797248/140‑1 (MQ=255) tCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCAGTTTGTGGACTG‑CCCCCCGGTAGACGATCCGGCGCTATCGTTGGAG‑TGCCCCCTATTCAGGTGGCTAAAGTTAGCAAATc > 1:9003140/1‑140 (MQ=255) cGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTAGAGTTGGAG‑TGCCCCCTATTCAGGTGGCTAAATTTAGCAAATc > 2:2007810/1‑140 (MQ=255) aGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCCTCCCCCATTTTGTGGACTGCCCCCCCGGTAGTCGATCCTGCCGTATAGTTGGAG‑TGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCaa > 2:7804183/1‑140 (MQ=255) aGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCaa < 2:3205141/140‑1 (MQ=255) ctgctTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCCTCTTCAGGTGGCTAAATTTAGCAAATCAATacac > 2:7652471/1‑140 (MQ=255) ctgctTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCACGGTAGACTATCCTGCCCTATAGTGGGTG‑TGCCCCCTATTCATGTGGCTATATTTAGCAATTCAATacac > 2:6334216/1‑140 (MQ=255) gctTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑GGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACtt < 2:1451162/140‑1 (MQ=255) ctTGGTGAGATCAGGAAGAGGTTAGCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTc < 2:7249017/140‑1 (MQ=255) tGGTGAGATCAGGAAGAGGTTACCGACACGATGGACAGCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAg < 2:8213727/140‑1 (MQ=255) ggTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGTAG‑TGCCCCCTATTCAGGTGGCTAAATATAGCAAATCAATACACTTCAgg > 2:11233118/1‑140 (MQ=255) gTGAGCTCAGGATGAGGTTACCGAAACGATGGTCATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCCTAGTCAGGTGGCTACATTTAGCAAATCAATACACTTCAggg < 1:9288568/140‑1 (MQ=255) gTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑GGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAggg < 1:7088257/140‑1 (MQ=255) gTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGGAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAggg < 2:6541416/140‑1 (MQ=255) gTGAGATAAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCAGGTAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATCCCCTTCAggg < 2:5916556/140‑1 (MQ=255) tGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAgggg < 2:10465589/140‑1 (MQ=255) agaTCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAgggggg < 1:10961450/140‑1 (MQ=255) agaTCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAgggggg < 1:5738386/140‑1 (MQ=255) agaTCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAgggggg < 1:4395619/140‑1 (MQ=255) ctCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAAGACACTTCAGGGGGGta < 2:3509699/139‑1 (MQ=255) aTCAGGATGAGGTTACCGTAACGATGGACATCATCCCCCATTTTGTGGAATGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGta < 1:4680252/140‑1 (MQ=255) aTCAGGAAGAGGTTACCTAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGta < 2:8142045/140‑1 (MQ=255) aTCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGta < 2:10048353/140‑1 (MQ=255) aTCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGta < 2:7349516/140‑1 (MQ=255) aTCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGta < 2:5024027/140‑1 (MQ=255) aTCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGta < 1:1629067/140‑1 (MQ=255) aTCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGta < 1:8936953/140‑1 (MQ=255) aTCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGGTGGAG‑TGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGta > 1:1501731/1‑140 (MQ=255) aTCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTGGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGta < 2:40026/140‑1 (MQ=255) aTCAGGAAGAGGGTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGta < 1:10384720/140‑1 (MQ=255) tCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCCTATTCAGGTGGCTAAATTTAGCAAAt > 2:8656083/1‑119 (MQ=255) aaGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATACTGCCCTATAGTTGGAG‑TGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTg < 2:1200264/140‑1 (MQ=255) ggTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGTTCCTGCCCTATAGTGGGAG‑TGCCCCCTCTGCCGGTGGCTAAAGTTAGCATATCAATCCACTTCGGGGGGGGATTATTGTagt > 1:6553219/1‑139 (MQ=255) ggTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTAGAGTTGGAG‑TGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTaga > 2:54859/1‑140 (MQ=255) gTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGCG‑TGCCCCCTATGCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTAGTGTagag > 2:1072628/1‑140 (MQ=255) ttACCGAAACGATGTACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGt < 1:11173459/140‑1 (MQ=255) ttACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGt < 2:11064293/140‑1 (MQ=255) aCGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCat < 1:6303078/140‑1 (MQ=255) aCGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCat > 2:1829774/1‑140 (MQ=255) cGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCCTCTTCAGGTGGCTACATTTAGCAACTCAATACACTTCAGGGGGGTATGATTGTAGAGTTTCCCCaga > 2:10181069/1‑138 (MQ=255) cGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCCTCTTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTCTTATTGTAGAGTTTcccctga > 2:7981472/1‑137 (MQ=255) cGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCata < 1:7204505/140‑1 (MQ=255) tGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCCTAGTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGt < 2:4707662/140‑1 (MQ=255) catcatCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCt > 1:415342/1‑140 (MQ=255) tcatcCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTAt < 1:529589/140‑1 (MQ=255) catcCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATg > 2:10327955/1‑140 (MQ=255) catcCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATg < 1:6819310/140‑1 (MQ=255) aatcCCCCATTTTGTGGACTGCCCCCCCGGTAGACTATCCTGACCTATATTTGGAG‑TGCCCCCTATTCAGGTTGCTAAATTTAGCTAATCAATACACTTCAGGTGGGTATTTTTGTAGAGTTTCCCCATATGTTTATATg < 2:5156799/139‑1 (MQ=255) atcCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATgg > 2:9146683/1‑140 (MQ=255) cccccATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGa > 1:239813/1‑140 (MQ=255) cATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCCTATTCAGGTGGGTAAAGTTAGCAAATCAATTCTCTTCAGGGGGGTATTATTGTAGAGTTTCCACATTTGTTTCTATGGGATCCa > 2:296820/1‑140 (MQ=255) ttttGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAgg < 2:4509916/140‑1 (MQ=255) tttGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGa > 2:2079672/1‑140 (MQ=255) cttGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCCTATTCCGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGa < 2:3138555/139‑1 (MQ=255) gACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGAc > 1:5461291/1‑140 (MQ=255) gACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGGATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGAc > 2:8302125/1‑140 (MQ=255) tGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAAt > 2:9902027/1‑140 (MQ=255) gCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATc > 1:9857042/1‑140 (MQ=255) cccccccGGTAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCCTCTTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCa > 1:3925733/1‑140 (MQ=255) cccGGTAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCAGGAg < 1:26875/140‑1 (MQ=255) gTAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCAGGAGTTAc > 2:9335752/1‑140 (MQ=255) gTAGACGATCCTGCCCTATAGTTGGAG‑TGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTGTCTATGGGATCCAGGAAATGACAATCAGGAGTTAc > 2:5707264/1‑140 (MQ=255) gACGATCCTGCCCTATAGTTGGAG‑TGCCCCCGATTCAGGTGGCTAAATTTAGCAAATCAATACACTGCAGGGGGGTATTATTGTAGAGTTTCCCCATTTGTTTCTATGGGATCCAGGAAATGACAATCAGGAGTTACaaa > 2:697264/1‑140 (MQ=255) aTCCTGCCCTATAGTTGGAG‑TGCCCCCTATTCAGGTGGCTAAATTTCGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTAGGGGATCCAGGAAATGACAATCAGGAGTTACAAAAACt < 1:5090123/140‑1 (MQ=255) aTCCTGCCCTATAGTTGGAG‑TGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCAGGAGTTACAAAAACt < 1:2245367/140‑1 (MQ=255) tCCTGCCCTATAGTTGGAG‑TGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCACCATATGTTTCTATGGGATCCAGGAACTGACCATCAGGAGTTACAAAAACtt > 2:1862962/1‑140 (MQ=255) tGCCCTATAGTTGGAG‑TGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACCATCAGGAGTTACAAAAACTTaaa > 1:8326077/1‑140 (MQ=255) gCCCTATAGTTGGAG‑TGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATTGGATCCAGGAAATGACAATCAGGAGTTACAAAAACTTAAAt < 1:10160352/140‑1 (MQ=255) gCCCTATAGTTGGAG‑TGCCCCCTATTCAGGTGGCTAAATTTAGCAAAGCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATAGGTTTCTATGGGATCCAGGAAATGACAATCAGGAGTTACAAAAACTTAAAt < 2:5237669/140‑1 (MQ=255) cccTATAGTTGGAG‑TGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCAGGAGTTACAAAAACTTAAATc > 1:8496601/1‑140 (MQ=255) tataGTTGGAG‑TGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCAGGAGTTACAAAAACTTAAATCTgg > 1:7554543/1‑140 (MQ=255) taGTTGTAG‑TGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCAGGAGTTACAAAAACTTAAATCTGGTc < 1:4977902/140‑1 (MQ=255) taGTTGGAG‑TGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCCGGAGTTACAAAAACTTAAATCTGGTc > 1:8116785/1‑140 (MQ=255) taGTTGGAG‑TGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCAGGAGTTACAAAAACTTAAATCTGGTc > 2:7090167/1‑140 (MQ=255) taGTTGGAG‑TGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCAGGAGTTACAAAAACTTAAATCTGGTc < 1:3444903/140‑1 (MQ=255) taGTTGGAG‑TGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCAGGAGTTACAAAAACTTAAATCTGGTc > 1:1828448/1‑140 (MQ=255) taGTTGGAG‑TGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCAGGAGTTACAAAAACTTAAATCTGGTc < 1:10526534/140‑1 (MQ=255) taGTTGGAG‑TGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCAGGAGTTACAAAAACTTAAATCTGGTc > 2:4293183/1‑140 (MQ=255) ggAG‑TGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCAGGAGTTACAAATACTTAAATCTGGTCAGGGc > 1:3236881/1‑140 (MQ=255) ggAG‑TGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCAGGAGTTACAAAAACTTAAATCTGGTCAGGGc > 1:3648098/1‑140 (MQ=255) gAG‑TGCCCCCTCTTCTGGTGGATAAATTTATCAAATCAATAAACTTCAGGGTGTTATTATTTTAGATTTTCCCCATATGATTATATGGGATCCAGGAAATGACAATCATGAGTTACAAAAACTTATATCTGGTCAGGGCa < 2:10921254/140‑1 (MQ=255) gAG‑TGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCAGGAGTTACAAAAACTTAAATCTGGTCAGGGCa > 1:8623633/1‑140 (MQ=255) gAG‑TGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCAGGAGTTACAAAAACTTAAATCTGGTCAGGGCa < 1:119795/140‑1 (MQ=255) gAG‑TGCCCCCTATTCAGGTGGCTAAATTTAGCAAAGCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCAGGAGTTACAAAAACTTAAATCTGGTCAGGGCa < 1:9529790/140‑1 (MQ=255) | TCTTGTCTGCTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAG‑TG‑CCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCAGGAGTTACAAAAACTTAAATCTGGTCAGGGCA > NZ_CP025268/2769710‑2769982 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |