| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 2,773,671 | (C)5→6 | intergenic (+161/‑55) | yfjQ → / → yfjR | DUF932 domain‑containing protein/WYL domain‑containing protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 2,773,666 | 1 | . | C | 95.8% | 1983.5 / 75.5 | 638 | intergenic (+156/‑60) | yfjQ/yfjR | DUF932 domain‑containing protein/WYL domain‑containing protein |
| Reads supporting (aligned to +/- strand): ref base . (25/2); new base C (372/239); total (397/241) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.21e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 694 total aligned reads displayed.
CGTTGTTAATATCGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCG‑C‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGTGA > NZ_CP025268/2773527‑2773802 | cGTTGTTAATCTCGGACACCACCTGACCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGATATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCg < 1:9538892/140‑1 (MQ=255)cGTTGTTAATATCGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCg < 2:7424281/140‑1 (MQ=255) ttgttAATATCGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCG‑c‑c < 1:1738666/140‑1 (MQ=255) ttAATATCGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCG‑c‑c‑cct < 1:7206022/140‑2 (MQ=255) ttAATATCGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCG‑c‑c‑ccc < 2:4137152/140‑1 (MQ=255) ttAATATCGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCG‑c‑c‑ccc < 1:3726345/140‑1 (MQ=255) ttAATATCGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCG‑c‑c‑ccc < 2:5723770/140‑1 (MQ=255) cGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTGACATCTGGCGTTTGCAGAAATAAAAAATAGTGTCTGCGTTGTCCATCGCCTGTCCg‑c‑c‑gcccgcgggg > 1:5265244/1‑133 (MQ=37) caccTGTCCGCATCGCTATGTGCTCTTGTGCCTCAATCCACCGGTTATAGCTTTTAACCCCCGTTACCTCTGGCTTTTGCAGAACTAACAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCCTCTCTCAAGTAAt > 2:9002560/1‑140 (MQ=25) accTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCATGTCCGCC‑C‑CCCTCTTTAAAGTAATc < 1:5011347/140‑1 (MQ=255) ccTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGTAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCCTCTGTAAAGTacgca > 2:2635525/1‑136 (MQ=255) ccTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGGTATAGCTTTTAACCCCCGTTACATCTGGCGTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCG‑CGC‑CCCTCTGTCAAGtcgtcg > 1:11362999/1‑135 (MQ=255) tGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCCTCTTTAAAGTAATcaca < 1:10256302/140‑1 (MQ=255) gTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCCGCTTTAAAGTAATCAcat > 2:3175679/1‑140 (MQ=255) cATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCCTCTTTACAGTACTCACATCAttt > 2:1071481/1‑140 (MQ=255) cATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCCTCTGTATAGTAATCTcatcatgt > 2:10883448/1‑138 (MQ=255) cATCGCTATGTGCTCGTGTGCCTCAATACCCCGGTTATAGCTTTTAACCCCCGGTACATCTGGCTTTTGCAGAAATAAAAAATCGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCCGCTTGATAGTAATCACATCAttt > 1:678081/1‑140 (MQ=255) cTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCG‑C‑CGCCCTCTGGATCGTGAGCACATCATTTtcggg > 1:4702209/1‑137 (MQ=255) cTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGGTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCCTCTTTACAGTAATCACATCATTTtcagt < 2:8221264/140‑1 (MQ=255) tATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTtc < 1:2552416/136‑1 (MQ=255) gCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCCTCTTTAAAGGAATCACATCATTGTCAGTCAGTTa > 1:669378/1‑140 (MQ=255) cTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTaa < 2:7591874/140‑1 (MQ=255) cTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTaa > 2:8417577/1‑140 (MQ=255) cTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTaa < 1:6983321/140‑1 (MQ=255) gtgtGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCCTCTTTATAGTAATCCCATCTTTTTCAGTCAGttttctt > 1:2034327/1‑135 (MQ=255) gtgtGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCCGCTTTAAAGTAATCACATCATTTTCAGTCGGTTAACtt > 1:10631492/1‑140 (MQ=255) gtgtGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCAGACCCTGTCCGCC‑C‑CCCTCTGTCAAGTAATCACATCATTTTCAGTCAGTTAACtt > 2:5448961/1‑140 (MQ=21) tgtgCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCGTACCCTGTCCGCC‑C‑CCCTCGTTAAAGTACTCACATCATTTTCAGTCAGTTAACttt > 1:1142540/1‑140 (MQ=21) ccacAATCCCCCGGTTATAGCGTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATATTAAATAGTTTCTGCGGTGGCCATACCCTGTCCGCC‑C‑CCCTCTTTATTGTAAGCACATCATGTGCAGTCAGTTAACTTTCGTg > 2:2823896/4‑140 (MQ=255) ccTCAATCCCCCGGTTATAGCTTTTAGCCCCCGTTACATCTGGCTTTTGCAGAAATAAAAGATAGTTTCTGCGTTGTCCATACCCTGGCCGCC‑C‑CCCTCGTTCAAGTACTCACATCATGTTCAGTCCGGTAACTGTCCTg > 1:7789229/1‑140 (MQ=255) aTCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGaa < 1:10463077/140‑1 (MQ=255) tCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAAt < 1:4149198/140‑1 (MQ=255) tCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAAt < 1:6413962/140‑1 (MQ=255) cccccGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAAtc < 1:10143594/140‑1 (MQ=255) ccGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAAtctct > 2:10484862/1‑140 (MQ=255) cGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAAtctctc < 1:1987981/140‑1 (MQ=255) cGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAAtctctc < 1:5609406/140‑1 (MQ=255) cGGGTATAGCTTGTCACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAAtctctc < 2:6671715/140‑1 (MQ=18) gTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTATCAGTCAGTTAACTTTCCTGGAGAATCTCTCAt > 2:6814549/1‑140 (MQ=255) gTTATAGCTTATAACCCCCGTTACATCAGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCAt < 1:8780488/140‑1 (MQ=255) taGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGaca > 1:9730872/1‑140 (MQ=255) taGCTTTTAACCCCCGTTACAACTGGCTTTTGCAGAAATAAAAAATATTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGaca < 2:7316323/140‑1 (MQ=255) aGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTGCTGCTTTGTCCATACCCTGTCCGCC‑C‑CCCTCTTTAAAGTAATAACATCAATATCAGACAGTTAACTTTCATGGAGAATCTCTCATGacac > 1:5913966/1‑140 (MQ=255) tttAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGc > 1:2244977/1‑140 (MQ=255) ttAACCCCCGTTACATCTGGCTTTTGCAGTAATAAAAAATAGTTTCTGCGTTGTCCATTCCCTGTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGGTAACTTTCGTGGAGAATCTCTCATGACACAGGCa > 2:7744514/1‑140 (MQ=17) ttAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTaa < 2:8754970/109‑1 (MQ=255) ttAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAGTCTCTCATGACACAGGCa > 2:5575532/1‑140 (MQ=255) ttAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCCTCTGTAAAGTAATCACATCATTTTCAGTCAGTGAACTTTCCTGGAGAATCTCTCATGACACAGGCa > 2:2391059/1‑140 (MQ=255) tAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGac > 1:1284884/1‑132 (MQ=255) tAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAg > 1:3352219/1‑140 (MQ=255) tAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCAGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAg > 2:8033097/1‑140 (MQ=255) cGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAAcgccg > 2:6090693/1‑140 (MQ=255) ttACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACgccgcc > 1:9867316/1‑140 (MQ=255) tCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGAc > 1:8996750/1‑140 (MQ=255) tCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGAc > 1:1481861/1‑140 (MQ=255) ggCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATATTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCgg > 2:5901058/1‑140 (MQ=255) ggCTTTCGCAGAAATAAAAAATAGTTTCTGAGTTGTCCATACACTGTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCATTAAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCgg > 2:2092340/1‑140 (MQ=14) tGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCggctggct > 1:2137514/1‑140 (MQ=255) cAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTggctgt < 1:4491534/140‑1 (MQ=255) cAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTggctgt < 1:11210625/140‑1 (MQ=255) aaTAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTggctgtcagg < 1:2735243/140‑1 (MQ=255) aaTAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTggctgtcagg < 1:10020150/140‑1 (MQ=255) aaTAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCCACTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTggctgtcagg < 2:3973182/140‑1 (MQ=255) aaaaaTAGTTACTGCGTTGTCCATACCCTGTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTggctgtcaggctgt < 1:428294/140‑1 (MQ=255) aaaaaGAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTggctgtcaggctgt < 2:1237405/140‑1 (MQ=255) gCGTTGTCCATACCCTGTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAg < 2:5105551/140‑1 (MQ=255) tGTCCAGACCCTGTCCGCC‑C‑CCCTCTTTAAAGTAATCCCATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATACTCAGCCGt < 2:3540095/140‑1 (MQ=11) gTCCATACCCTGTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGCTAATCAGCCggc > 2:11125178/1‑138 (MQ=255) tCCATACCCTGTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCt > 2:4753370/1‑140 (MQ=255) aTACCCTGTCCGCC‑C‑CCCTCTTTCAAGGAATCACATCATTTTCAGTCCGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGACCGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGt < 2:431682/140‑1 (MQ=11) gTCCGCC‑C‑CCCTCTTTCAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTGTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGACAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 2:10407661/1‑140 (MQ=14) gTCCGCC‑C‑CCCTCTTTAAAGTAATCTCATCATTTTCAGTCAGTGAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGTCCGGCTGGCTGTCAGGCTGTCTCTGATAATCAGCCGTCGGGTTGCGGGt > 2:10630518/1‑140 (MQ=14) gTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGacac < 1:8551069/72‑1 (MQ=255) gTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATCATCAGCCGTCTGGTTGCGGGt > 2:3759061/1‑140 (MQ=255) gTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 2:5285967/1‑140 (MQ=255) gTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 2:944002/1‑140 (MQ=255) gTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 2:9266717/1‑140 (MQ=255) gTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 1:11020977/1‑140 (MQ=255) gTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 1:300235/1‑140 (MQ=255) gTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 1:364209/1‑140 (MQ=255) gTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt < 1:4804888/140‑1 (MQ=255) gTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 1:6077273/1‑140 (MQ=255) gTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 1:733277/1‑140 (MQ=255) gTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 1:7615255/1‑140 (MQ=255) gTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 1:799441/1‑140 (MQ=255) gTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 1:8180745/1‑140 (MQ=255) gTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 2:7201564/1‑140 (MQ=255) gTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 2:7035184/1‑140 (MQ=255) gTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt < 2:4553972/140‑1 (MQ=255) gTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 1:9277812/1‑140 (MQ=255) gTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 2:6563570/1‑140 (MQ=255) gTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 2:10148379/1‑140 (MQ=255) gTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 2:6018544/1‑140 (MQ=255) gTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 2:489448/1‑140 (MQ=255) gTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 2:11368450/1‑140 (MQ=255) gTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 2:1597269/1‑140 (MQ=255) gTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 2:3386643/1‑140 (MQ=255) gTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGGCACTGATAATCAGCCGTCTGGTTGCGGGt > 2:9610859/1‑140 (MQ=255) gTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCCCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCAc > 2:6337104/1‑114 (MQ=255) gTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTGCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGGCACTGATAATCAGCCGTCTGGGTGCggtg > 2:1753684/1‑138 (MQ=14) | CGTTGTTAATATCGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCG‑C‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGTGA > NZ_CP025268/2773527‑2773802 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |