| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 3,743,290 | +C | intergenic (‑66/‑116) | yiaJ ← / → galK | IclR family transcriptional regulator YiaJ/galactokinase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 3,743,289 | 1 | . | C | 96.9% | 752.6 / 15.2 | 226 | intergenic (‑65/‑117) | yiaJ/galK | IclR family transcriptional regulator YiaJ/galactokinase |
| Reads supporting (aligned to +/- strand): ref base . (6/1); new base C (122/97); total (128/98) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.42e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 238 total aligned reads displayed.
TGGCTTCCGGCTGGACGCTCTTTTTCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTA‑T‑AA‑CAATTGATTTTTATGTCTTTTGAAATTCATCAATCCTGTTGACAATTAATCATCGGCATAGTATATCGGCATAGTATAATACGACAAGGTGAGGAACTAAACCCAGGAGGCAGATCATGAGTCTGAAAGA > NZ_CP025268/3743154‑3743419 | tGGCTTCCGGCTGGACGCTCTTTTTCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACTGATAATTTA‑T‑AA‑ccaa > 1:3716151/1‑137 (MQ=255)tGGCTTCCGGCTGGACGCTCTTTTTCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTATTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCACAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTA‑T‑AA‑ccaa > 2:4849679/1‑137 (MQ=255) gCTTCCGGCAGGACGCTCTTTTTCCTGCGCCATCTCGTTCTATTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTA‑T‑AA‑ccaatt < 2:9773739/140‑6 (MQ=255) cTTCCGGCTGGACGCTCTTTTTCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGTTAATTTA‑T‑AACCAATTg > 1:5558508/1‑140 (MQ=255) ccGGCTGGACGCTCTTTTTCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTA‑T‑AACCAATTGAtt > 1:10509419/1‑140 (MQ=255) ccGGCTGGACGCTCTTTTTCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTA‑T‑AACCAATTGAtt > 1:4820027/1‑140 (MQ=255) ccGGCTGGACGCTCTTTTTCCGGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTA‑TAAA‑CAATAGAtt > 1:11164655/1‑140 (MQ=255) ggACTCTCTTTTTCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTA‑T‑AACCAATTGATTTTTATg < 1:6669591/140‑1 (MQ=255) ggACGCTCTTTTTCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCTCGATCTCGACAGATAATTTA‑T‑AACCAATTGATTTTTATg > 2:2796937/1‑140 (MQ=255) ggACGCTCTTTTTCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTA‑T‑AACCAATTGATTTTTATg < 1:7754397/140‑1 (MQ=255) tttttCCTGCGCCAACTCGTTCTCATTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTGCTGATGGTAGCGCAAAGTGTGCCGGAGTTCACGATCTCGACAGATAATTTA‑TGAC‑CAATTGATTTTTATGTCTTTTGa > 1:4066460/1‑140 (MQ=255) ttttCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTA‑T‑AACCAATTGATTTTTATGTCTTTTGaa < 2:9338311/140‑1 (MQ=255) ttttCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTA‑T‑AACCAATTGATTTTTATGTCTTTTGaa > 1:4518005/1‑140 (MQ=255) ttCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTA‑T‑AACCAATTGATTTTTATGTCTTTTGAAAt < 1:9374068/140‑1 (MQ=255) tCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTA‑T‑AACCAATTGATTTTTATGTCTTTTGAAAtt < 2:10351112/140‑1 (MQ=255) tCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTA‑T‑AACCAATTGATTTTTATGTCTTTTGAAAtt < 2:1490611/140‑1 (MQ=255) gcgcCATCTCGTTCTCTTTTTTTCCCCTCACTTCGTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATGTA‑T‑AACCAATTGATTTTTATGTCTTTTGAAATtcatc < 1:9147994/140‑1 (MQ=255) gcgcCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTA‑T‑AACCAATTGATTTTTATGTCTTTTGAAATtcatc > 2:607233/1‑140 (MQ=255) gcgcCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTA‑T‑AACCAATTGATTTTTATGTCTTTTGAAATtcatc < 1:1210886/140‑1 (MQ=255) gcgcCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATATAGACAGATAATTTA‑T‑AACCAATTGATTTTTATGTCTTTTGAAATtcatc > 2:4179473/1‑140 (MQ=255) cgcCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTA‑T‑AACCAATTGATTTTTATGTCTTTTGAAATtcatca < 1:7512203/140‑1 (MQ=255) cgcCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTA‑T‑AACCAATTGATTTTTATGTCTTTTGAAATtcatca < 2:4005702/140‑1 (MQ=255) gcCACCTCGTTCTCTTTCGTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTA‑T‑AACCAATTGATTTTTATGTCTTTTGAAATTCATCaa < 1:7149700/140‑1 (MQ=255) ccATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTA‑T‑AACCAATTGATTTTTATGTCTTTTGAAATTCATCAAt < 1:6984326/140‑1 (MQ=255) tctcGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTA‑T‑AACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCag > 1:4454746‑M1/1‑138 (MQ=255) tctcGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTA‑T‑AACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCag > 1:2136949‑M1/1‑138 (MQ=255) ttCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTA‑T‑AACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgc > 1:2148974‑M1/1‑133 (MQ=255) tctcTTTTTTTCCCATCTCTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTA‑T‑AACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgcc < 1:7800247‑M1/140‑9 (MQ=255) tctcTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTA‑T‑AACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgcc < 2:2070310‑M1/140‑9 (MQ=255) tctcTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTA‑T‑AACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgcc < 1:8329472‑M1/140‑9 (MQ=255) tctcTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTA‑T‑AACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgcc < 1:1259749‑M1/140‑9 (MQ=255) tctcTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTA‑T‑AACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgcc < 1:11112490‑M1/140‑9 (MQ=255) tctcTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTA‑T‑AACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgcc < 1:3061424‑M1/140‑9 (MQ=255) tctcTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTA‑T‑AACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgcc < 1:4653307‑M1/140‑9 (MQ=255) tctcTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTA‑T‑AACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgcc < 1:168265‑M1/140‑9 (MQ=255) tctcTTATTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTA‑T‑AACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgcc < 2:189548‑M1/140‑9 (MQ=255) tctcATTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTA‑T‑AACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgcc < 1:5277560‑M1/140‑9 (MQ=255) tctTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTA‑T‑AACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgcctt > 1:9056401‑M1/1‑130 (MQ=255) ctTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTA‑T‑AACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttg < 1:8652562‑M1/140‑12 (MQ=255) tttttttCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTA‑T‑AACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgt > 1:7674397‑M1/1‑128 (MQ=255) tttttttCCAATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGACGTAGTTCACGATCTCGACAGATAATTTA‑T‑AACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgcattgt < 2:5938333‑M1/140‑13 (MQ=255) tttttCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTA‑T‑AACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccgtgtta > 1:10037499‑M1/1‑126 (MQ=255) cATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTA‑T‑AACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtg < 1:5139449‑M1/140‑22 (MQ=255) aTCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTATT‑AC‑CAATTGAGTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtga > 1:8808972‑M1/1‑118 (MQ=255) aTCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTA‑T‑AACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgcc > 2:1952510‑M1/1‑118 (MQ=255) aTCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTA‑T‑AACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgcc < 1:1952511‑M1/126‑9 (MQ=255) aTCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGAAGTTCACGATCACGACAGATAATTTA‑T‑AACCAATTGAGTGTTATGTCTTTAGAAATTCATCAATCagatagccgtgttaaaaagtga > 2:6929830‑M1/1‑118 (MQ=255) tCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTATTTCACGATCTCGACAGATAATTTA‑T‑AACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgat < 2:8003034‑M1/140‑24 (MQ=255) tCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTA‑T‑AACCAATTGATTTTTCTGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgat < 2:9654597‑M1/140‑24 (MQ=255) tCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTA‑T‑AACCAATTGATTTTTATGTCTTTTGAAATTCATCTATCagattgccttgttaaatagtgat < 2:7319554‑M1/140‑24 (MQ=255) tCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTA‑T‑AACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgat < 2:3016813‑M1/140‑24 (MQ=255) tCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTA‑T‑AACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgat < 1:6768194‑M1/140‑24 (MQ=255) tCACTTCATTCCCCCTTATGTCGCCTCCTGATGGTATCGCAAAGTGTGCCGTAGTTCACGAACTCGACAGATAATTTA‑T‑AACCAATTGATTTCTATGTCTTTTGAAATTCATCAATCagattgccatgttaaaaagtgat < 2:7252994‑M1/140‑24 (MQ=255) ccaCGTCGTTCCCCATTTTGTCGCGTCCTGCTGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGCTAATTTA‑T‑AACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgat < 1:7283785‑M1/139‑24 (MQ=255) cACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTA‑T‑AACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatc > 1:8932886‑M1/1‑116 (MQ=255) cACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTA‑T‑AACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatc > 1:9595415‑M1/1‑116 (MQ=255) cATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTA‑T‑AACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaa > 1:3881591‑M1/1‑104 (MQ=255) aTTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTA‑T‑AACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaa > 2:2420244‑M1/1‑103 (MQ=255) tttGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTA‑T‑AACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatc < 2:4337252‑M1/140‑40 (MQ=255) ttGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTGCACGATCTCGACCGATAATTTA‑T‑AACCAAGTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttggtaaaaagtgagcgatatatttgaaatca > 2:3756343‑M1/1‑100 (MQ=255) tCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTA‑T‑AACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgacatcaagt > 2:4559563‑M1/1‑97 (MQ=255) gTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTA‑T‑AACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcg < 1:3480728‑M1/140‑48 (MQ=255) tCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTA‑T‑AACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttataaagtgatcgatatatttgaaatcaagtttcgc > 1:10907767‑M1/1‑92 (MQ=255) tCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTA‑T‑AACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgc > 2:5403777‑M1/1‑92 (MQ=255) aTGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTA‑T‑AACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatatt > 1:4719044‑M1/1‑87 (MQ=255) aTGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTA‑T‑AACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatatt > 1:4595127‑M1/1‑87 (MQ=255) agagcaaaGTGTGCCGTAGTTCACGATCTCGACAGATAATTTA‑T‑AACCAATTGATTTTTATGTCTTTTGAAATTCATAAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaat > 2:171936‑M1/4‑82 (MQ=255) aGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTA‑T‑AACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaat > 1:9815622‑M1/1‑82 (MQ=255) aGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTA‑T‑AACCAATTGAGTTTTATGTCTTTTGAAATTCATCAATCagattgccttggtaaaatgtgatcgatctatttgaaatcaagtttcgcagagtgatct > 2:6606282‑M1/1‑82 (MQ=255) gcgcAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTA‑T‑AACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaatt > 2:6728283‑M1/1‑81 (MQ=255) cgcAAAGTGTGCCGTAGTTCACGATCTCGTCAGATAATTTA‑T‑AACCAATTGATTTTTTTGTCTTTTGAAATTCATCAATCagattgccttgtgatatagtgtgcgatatctttgaactcaagtttagcatattgaaattt > 2:9297900‑M1/1‑80 (MQ=255) cgcAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTA‑T‑AACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattt > 1:4532207‑M1/1‑80 (MQ=255) cgcAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTA‑T‑AACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattt > 2:11417815‑M1/1‑80 (MQ=255) cAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTA‑T‑AACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCtgattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaatttta < 1:5882772‑M1/140‑63 (MQ=255) aaaGTGTGCCGTAGTTCACGATCTCGACAGATAATTTA‑T‑AACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgtgaaaaattgctcgatatatttgaaatcaagtttcgcattttgaaattttaa > 2:7798778‑M1/1‑77 (MQ=255) aaaGTGTGCCGTAGTTCACGATCTCGACAGATAATTTA‑T‑AACCAATTGATTTTTATGTCGTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaa > 2:1575561‑M1/1‑77 (MQ=255) aGTGTGCCGTAGTTCACGATCTCGACAGATAATTTA‑T‑AACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagc > 2:1856332‑M1/1‑75 (MQ=255) tgtgCCGTAGTTCACGATCTCGACAGATAATTTA‑T‑AACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagcca > 2:6226787‑M1/1‑73 (MQ=255) tgCCGTAGTTCACGATCTCGACAGATAATTTA‑T‑AACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaa > 2:5431457‑M1/1‑71 (MQ=255) gCCGTAGTTCACGATCTCGACAGATAATTTA‑T‑AACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaa > 1:2774910‑M1/1‑70 (MQ=255) aGTTCACGATCTCGACAGATAATTTA‑T‑AACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaaagcg < 2:6367850‑M1/140‑76 (MQ=255) aGTTCACGATCTCGACAGATAATTTA‑T‑AACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaaagcg > 2:5066376‑M1/1‑65 (MQ=255) ttCACGATCTCGACAGATAATTTA‑T‑AACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccgaaaaagcgag > 2:7970873‑M1/1‑63 (MQ=255) ttCACGATCTCGACAGATAATTTA‑T‑AACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaaagcgat > 2:8507574‑M1/1‑63 (MQ=255) ttCACGATCTCGACAGATAATTTA‑T‑AACCAATTGATTTTTATGGCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaaagcgat > 2:2524020‑M1/1‑63 (MQ=255) cACGATCTCGACAGATAATTTA‑T‑AACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaattgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaaagcgatca > 2:5749512‑M1/1‑61 (MQ=255) cACGATCTCGACAGATAATTTA‑T‑AACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaaagcgatca > 1:1623162‑M1/1‑61 (MQ=255) cACGATCTCGACAGATAATTTA‑T‑AACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaaagcgatca > 2:3275157‑M1/1‑61 (MQ=255) aTCTCGACAGATAATTTA‑T‑AACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaaagcgatcaaaaa < 1:6312108‑M1/140‑84 (MQ=255) tctcGACAGATAATTTA‑T‑AACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaaagcgatcaaaaaa > 2:1109842‑M1/1‑56 (MQ=255) tcgcgacAGATAATTTA‑TCAC‑CAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaatagtgctcgatatatttgaaatcaagtttctcttattgaaattgtaaggctaaaaagcgatcaatcaa > 2:8784645‑M1/4‑56 (MQ=255) ctcGACAGATAATTTA‑T‑AACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaaagcgatcaaaaaaa > 1:2067383‑M1/1‑55 (MQ=255) cGACAGATAATTTA‑T‑AACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaatccaaaaaagcgatcaaaaaaaca > 2:11261160‑M1/1‑53 (MQ=255) cGACAGATAATTTA‑T‑AACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaaagcgatcaaaaaaaca > 1:7544727‑M1/1‑53 (MQ=255) cGACAGATAATTTA‑T‑AACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaaagcgatcaaaaaaaca > 1:10247902‑M1/1‑53 (MQ=255) cGACAGATAATTTA‑T‑AACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaaagcgatcaaaaaaaca > 1:4952509‑M1/1‑53 (MQ=255) aCAGATAATTTA‑T‑AACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaaagcgatcaaaaaaacaag < 2:3587068‑M1/140‑90 (MQ=255) aTAATTTA‑T‑AACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaaagcgatcaaaaaaacaaggaag > 1:9215282‑M1/1‑47 (MQ=255) aaTTTA‑T‑AACCAATTGATTTTTATGTCTTTTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaaagcgatcaaaaaaacaaggaagcc > 2:7672169‑M1/1‑45 (MQ=255) aaTTTA‑T‑AACCAATTGATTTTTATGTCTATTGAAATTCATCAATCagattgccttgttaaaaagtgatcgatatatttgaaatcaagtttcgcatattgaaattttaagccaaaaaagcgatcaaaaaaacaaggaagcc < 2:9237771‑M1/140‑96 (MQ=255) | TGGCTTCCGGCTGGACGCTCTTTTTCCTGCGCCATCTCGTTCTCTTTTTTTCCCATCACTTCTTTCCCCATTTTGTCGCGTCCTGATGGTAGCGCAAAGTGTGCCGTAGTTCACGATCTCGACAGATAATTTA‑T‑AA‑CAATTGATTTTTATGTCTTTTGAAATTCATCAATCCTGTTGACAATTAATCATCGGCATAGTATATCGGCATAGTATAATACGACAAGGTGAGGAACTAAACCCAGGAGGCAGATCATGAGTCTGAAAGA > NZ_CP025268/3743154‑3743419 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |