| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NZ_CP025268 | 3,864,444 | +GCC | pseudogene (1078/1613 nt) | CXP41_RS20140 ← | PTS sugar transporter subunit IIB |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NZ_CP025268 | = 3864444 | 6 (0.010) | 628 (0.950) +GCC |
133/268 | 0.4 | 99.1% | pseudogene (1078/1613 nt) | CXP41_RS20140 | PTS sugar transporter subunit IIB |
| ? | NZ_CP025268 | 3864445 = | 6 (0.010) | pseudogene (1077/1613 nt) | CXP41_RS20140 | PTS sugar transporter subunit IIB | |||||
Only 100 of 674 total aligned reads displayed.
GTGTGCGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACTTAGTCAATCAGACCTCCG‑C‑C‑ATGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NZ_CP025268/3864307‑3864444‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGCGGTTAAGGTTGCG > NZ_CP025268/3864445‑3864583 ||| GTGTGCGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTATTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑C‑ATGTTG < 2:2782328/140‑1 GTGCGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑C‑ATGTTGCC < 1:2286397/140‑1 GTGCGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑C‑ATGTTGCC < 1:154734/140‑1 GTGCGGAAAACAACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGTGATCCAGTTTTGCGGTAAATCCTAGTCAATCTGACATCAGCC‑C‑ATGTTGac > 2:8196532/1‑138 CGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑C‑ATGTTGCCCAC < 2:401426/140‑1 CGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑C‑ATGTTGCCCAC < 1:2146244/140‑1 GGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑C‑ATGTTGCCCACC < 1:10001722/140‑1 ACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCCTCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑C‑ATGTTGCCCACCACACC > 1:5674847/1‑140 ACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTACAACCTAGTCAATCAGACCTCCGCC‑C‑AGGTTGCCCACCACACC > 2:8742515/1‑140 ACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAATCCTAGTCAATCAGACCTCCGCC‑C‑ATGTTGCCCACCACACC > 1:6919169/1‑140 CCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑C‑ATGTTGCCCACCACACCA < 2:565479/140‑1 AAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑C‑ATGTTGCCCACCACACCAAAGAG < 1:10527523/140‑1 AAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑C‑ATGTTGCCCACCACACCAAAGAG < 1:9296788/140‑1 AGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑C‑ATGTTGCCCACCACACCAAAGAGA < 2:7469841/140‑1 AGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑C‑ATGTTGCCCACCACACCAAAGAGA < 2:11184752/140‑1 AGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑C‑ATGTTGCCCACCACACCAAAGAGA < 1:9948504/140‑1 CAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCCGCATCATATCCGCGAGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAACACCTAGACAATCAGACCTCAGCC‑C‑ATGTTGCCCACCACACCAAAGAGATACA < 2:2467586/140‑1 CAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑C‑ATGTTGCCCACCACACCAAAGAGATACA < 2:3068922/140‑1 CAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑C‑ATGTTGCCCACCACACCAAAGAGATACA < 1:11323738/140‑1 gcTAAAGCACAACCCAATTCCGATTTGGGTCAGCATCATATCAGCGTGGATGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCAGAC‑C‑ATGTTGCCCCCCACTCCAATGAGATTCATAACGG > 1:1188128/3‑140 GGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑C‑ATGTTGCCCACCACACCAAAGAGATACATTACGG > 1:11059021/1‑140 GGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑C‑ATGTTGACCACCACACCAAAGAGATACATTACGG > 1:6288842/1‑140 GTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑C‑CTGTTGCCCACCACACCAAAGAGATACATTACGGT < 1:6655333/140‑1 GTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑C‑ATGTTGCCCACCACACCAAAGAGATACATTACGGT < 2:4447033/140‑1 GTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑C‑ATGTTGCCCACCACACCAAAGAGATACATTACGGT < 2:6139432/140‑1 tatAGCACAACCCAATGGCGCTTTGGGTCAGCATGATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCGAGTCAATCAGACCTCCGCC‑C‑ATGTTGCCCACCACACCCTAGAGATCCATTACTGTC > 2:3763519/4‑140 TAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑C‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTC < 2:3180355/140‑1 TAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑C‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTC > 2:2278967/1‑140 TAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑C‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTC > 2:1382854/1‑140 TAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑C‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTC > 1:798497/1‑140 TAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑C‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTC > 1:7606065/1‑140 TAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑C‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTC > 2:5825626/1‑140 TAAAGCACAACCCAAAGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCGATTCAATCAGACCTCCGCC‑C‑GTGTTGCCCTCCACCCCAGTGTGATACATTCCGGTC > 2:7071232/1‑140 AAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑C‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCG < 2:6891517/140‑1 AGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑C‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGAC > 2:5146475/1‑140 AACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑C‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGA > 2:4604752/1‑140 ACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑C‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAG > 1:391667/1‑140 ACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑C‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAG < 1:4534682/140‑1 ACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑C‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAG < 1:1843528/140‑1 CCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑C‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGG > 1:2708543/1‑140 CCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑C‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGG > 1:8685038/1‑140 CCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑C‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGG > 1:10959531/1‑140 CCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑C‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGG > 2:6604676/1‑140 AATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑C‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCG < 2:1802473/140‑1 ATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑C‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGC > 1:3260789/1‑140 ATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑C‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGC < 2:8040331/140‑1 TGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAATCCTAGTCCATCAGACCTCCGCC‑C‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCC > 2:5440091/1‑140 CGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCCGTTGTGCGGTAAAACCTAGTCAATCAGCCCTCCGCC‑C‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGC < 2:7312670/140‑1 CGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑C‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGC > 1:4807923/1‑140 CGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑C‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGC < 1:2974313/140‑1 CGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑C‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGC < 1:9405859/140‑1 GATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑C‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCA < 2:4975229/140‑1 ATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑C‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCAC > 2:5895306/1‑140 ATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑C‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCAC > 1:2399426/1‑140 TTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑C‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACG > 2:10458396/1‑140 GGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑C‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGT < 2:9040022/140‑1 CAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑C‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTc > 2:2016161/1‑139 CATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑C‑ATGTTGCCCACCACACCAAAGAGATACAGTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCG > 2:7788417/1‑140 TATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑C‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCACAC > 1:10732275/1‑140 TCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTACAACCTAGTCAATCAGACCTCCGCC‑C‑AGGGTGCCCACCACACCCAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAG < 2:849537/140‑1 CGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑C‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCA < 2:9345094/140‑1 GCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑C‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAA > 1:1406156/1‑140 GCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑C‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAA > 1:9495997/1‑140 GCGTGATTGCTGANCATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑C‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAA > 1:9824054/1‑140 CGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑C‑ATGTTGCCCACCCCACCAAAGAGAGACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAAC > 2:152403/1‑140 CGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑C‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAcc > 2:4193265/1‑138 TGGTTGCTGAACATCGGGATCCAGTTTTGAGGTAAAACCTAGTCAATCAGACATCCG‑CAC‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGACTACCGCAAACAGCAACGG > 1:8261480/1‑140 GCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑C‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAA > 2:1075879/1‑140 TGAACATCGGGATCCAGTTTTGCGGTAATACCTAGTCAATCAGACCTCCG‑C‑CGATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATG < 2:9565917/140‑1 AACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑C‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAA < 1:5274171/140‑1 ACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑C‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAAC < 2:10605383/140‑1 CATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑C‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACA > 1:879615/1‑140 CAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑C‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAA > 1:5945710/1‑140 CAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑C‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAA > 1:616783/1‑140 TTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑C‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTC > 1:2000593/1‑140 TGCGGTAAAACCTAGTCAATCAGACCTCCGCC‑C‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAG < 2:7946708/140‑1 GGTAAAACCTAGTCAATCAGACCTCCGCC‑C‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGG < 1:8921239/140‑1 AAACCTAGTCAATCAGACCTCCGCC‑C‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCG > 1:7184660/1‑140 AACCTAGTCACTCAGACCTCCGCC‑C‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGG < 1:4994268/140‑1 AACCTAGTCAATCAGACCTCCGCC‑C‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGG < 2:2855726/140‑1 AACCTAGTCAATCAGACCTCCGCC‑C‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGG < 1:5446894/140‑1 AGTCAATCAGACCTCCGCC‑C‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTCCCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATT > 2:6392376/1‑140 TCAATCAGACCTCCGCC‑C‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCC > 1:3449790/1‑140 TCAGACCTCCGCC‑C‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGCAGGGAAATTCCAGCGGTTCGGGAAGTCCGACC > 1:10200318/1‑140 CCTCCGCC‑C‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCAT < 2:10309966/140‑1 CTCCGCC‑C‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATG < 1:4086125/140‑1 CTCCGCC‑C‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATG < 2:1178842/140‑1 CTCCGCC‑C‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATG < 1:3185026/140‑1 CTCCGCC‑C‑ATGTTGCCCACCACACCAAAGAGATACATGACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATG < 2:2159393/140‑1 ccgcC‑C‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGC > 1:3784121/5‑140 cgcC‑C‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGCG > 1:7882432/4‑140 gcC‑C‑ATGTTGCCCACCACACCAATGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGCGG > 2:6309491/3‑140 C‑C‑ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGCGGTT < 2:8983411/140‑1 ATGTTGCCCACCACACCACAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCTCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGCGGTTAA > 2:344140/1‑140 ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGACCAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCAGGGCGGTTAA > 2:10153182/1‑140 ATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGCGGTTAA > 1:434485/1‑140 GTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGCGGTTAAGG < 1:7458865/140‑1 GCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGCGGTTAAGGTTG > 1:10631265/1‑140 GCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGCGGTTAAGGTTG > 1:10289271/1‑140 CCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGCGGTTAAGGTTGCG < 2:3489231/140‑1 ||| GTGTGCGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACTTAGTCAATCAGACCTCCG‑C‑C‑ATGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NZ_CP025268/3864307‑3864444‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGCGGTTAAGGTTGCG > NZ_CP025268/3864445‑3864583 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |