Predicted mutation
evidence seq id position mutation annotation gene description
JC NZ_CP025268 4,492,041 +ATACGTGTAAT intergenic (‑52/+15) yjgR ← / ← idnR DUF853 domain‑containing protein/DNA‑binding transcriptional regulator IdnR

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NZ_CP025268 = 44920411 (0.000)636 (1.030)
+ATACGTGTAAT
137/252 0.2 99.9% intergenic (‑52/+15) yjgR/idnR DUF853 domain‑containing protein/DNA‑binding transcriptional regulator IdnR
?NZ_CP025268 4492042 = 1 (0.000)intergenic (‑53/+14) yjgR/idnR DUF853 domain‑containing protein/DNA‑binding transcriptional regulator IdnR

Only 100 of 698 total aligned reads displayed.

CGGTAATCAGCCCATGACGGTTAGCCATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGA‑‑‑‑‑‑‑‑‑‑‑GAAGAGAAAATAACTTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAATATCA  >  NZ_CP025268/4491902‑4492167
                                                                                                                                           |                                                                                                                                         
 ggTAATCAGCCCATGACGGTTAGCCATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAa                                                                                                                                          >  1:468750‑M1/1‑139 (MQ=255)
 ggTAATCAGCCCATGACGGTTAGCCATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAa                                                                                                                                          <  1:11387620‑M1/140‑2 (MQ=255)
  gTACTCAGCCCATGACGGTTAGCCATTCCCGGCAGTAAAAACAGTTCTGGGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAat                                                                                                                                         <  2:4567141‑M1/140‑3 (MQ=255)
  gTAATCAGCCCATGACGGTTAGCCATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAat                                                                                                                                         <  1:8688871‑M1/140‑3 (MQ=255)
  gTAATCAGCCCATGACGGTTAGCCATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAat                                                                                                                                         <  1:6186410‑M1/140‑3 (MQ=255)
    aaTCAGCCCATGACGGTTAGCCATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAatac                                                                                                                                       <  2:4926077‑M1/140‑5 (MQ=255)
         gCCCATGACGGTTAGCCATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAatacgtgta                                                                                                                                  <  1:11113789‑M1/140‑10 (MQ=255)
          cccATGACGGTTAGCCATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAatacgtgtac                                                                                                                                 >  1:10548248‑M1/1‑130 (MQ=255)
          cccATGACGGTTAGCCATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAatacgtgtaa                                                                                                                                 >  1:7543817‑M1/1‑130 (MQ=255)
              tGACGGTTAGCCATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAatacgtgtaatgaa                                                                                                                             <  2:8692722‑M1/140‑15 (MQ=255)
                aCGGTTAGCCATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAatacgtgtaatgaaga                                                                                                                           <  2:7945622‑M1/140‑17 (MQ=255)
                    ttAGCCATTCCCTGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGTGTTCACTCATGAGATATCCTACAGTTTCCTGCCTGGAGTATAGGAAACGTCCGGCAAAGAGAatacgtgtaatgaagagaaa                                                                                                                       <  2:9290709‑M1/140‑21 (MQ=255)
                    ttAGCCATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAatacgtgtaatgacgagaaa                                                                                                                       >  1:11013424‑M1/1‑120 (MQ=255)
                    ttAGCCATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAatacgtgtaatgaagagaaa                                                                                                                       >  1:8871672‑M1/1‑120 (MQ=255)
                    ttAGCCATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAatacgtgtaatgaagagaaa                                                                                                                       <  1:4198344‑M1/140‑21 (MQ=255)
                      aGCCATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAatacgtgtaatgaagagaaaat                                                                                                                     <  2:9108118‑M1/140‑23 (MQ=255)
                      aGCCATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAatacgtgtaatgaagagaaaat                                                                                                                     <  2:7285214‑M1/140‑23 (MQ=255)
                        ccATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCACAGAGAatacgtgtcatgtcgagaaactaa                                                                                                                   >  1:8466517‑M1/1‑116 (MQ=255)
                         cATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAatacgtgtaatgaagagaaaataac                                                                                                                  >  2:2285304‑M1/1‑115 (MQ=255)
                          aTTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAatacgtgtaatgaagagaaaataacc                                                                                                                 >  1:4851291‑M1/1‑114 (MQ=255)
                            tCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAatacgtgtaatgaagagaaaataaccta                                                                                                               >  2:652499‑M1/1‑112 (MQ=255)
                             cccGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCAGGCAAAGAGAatacgtgtaatgaagagaaaatatcctaa                                                                                                              >  2:11219855‑M1/1‑111 (MQ=255)
                              ccGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAatacgtgtaatgaagagaaaataacctaaa                                                                                                             >  1:1694608‑M1/1‑110 (MQ=255)
                              ccGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAatacgtgtaatgaagagaaaataacctaaa                                                                                                             <  2:5911626‑M1/140‑31 (MQ=255)
                              ccGGCAGTAAAAACAGTTCTGTGTCCGGCGTGAGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAatacgtgtaatgaagagaaaataacctaaa                                                                                                             <  2:8337587‑M1/140‑31 (MQ=255)
                                       aacacagTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAatacgtgtaatgaagagaaaataacctaaagcgtgttgc                                                                                                    <  1:8311999‑M1/137‑40 (MQ=255)
                                       aaaaCAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAatacgtgtaatgaagagaaaataacctaaagcgtgttgc                                                                                                    <  1:316589‑M1/140‑40 (MQ=255)
                                       aaaaCAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAatacgtgtaatgaagagaaaataacctaaagcgtgttgc                                                                                                    <  1:7271895‑M1/140‑40 (MQ=255)
                                       aaaaCAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAatacgtgtaatgaagagaaaataacctaaagcgtgttgc                                                                                                    <  1:680004‑M1/140‑40 (MQ=255)
                                       aaaaCAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAatacgtgtaatgaagagaaaataacctaaagcgtgttgc                                                                                                    <  2:10665345‑M1/140‑40 (MQ=255)
                                            aGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAatacgtgtaatgaagagcaaataacctaaagcgtgatgccgtga                                                                                               >  2:10000389‑M1/1‑96 (MQ=255)
                                              ttCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgata                                                                                             <  1:5838655‑M1/140‑47 (MQ=255)
                                              ttCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgata                                                                                             <  1:3364500‑M1/140‑47 (MQ=255)
                                               tCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAatacttgtaatgaagagaaaataacctaaagcgtgttgcagtgataa                                                                                            >  1:7041807‑M1/1‑93 (MQ=255)
                                                   tgtCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataaatct                                                                                        >  2:556751‑M1/1‑89 (MQ=255)
                                                    gtCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataaatctg                                                                                       <  2:11451194‑M1/140‑53 (MQ=255)
                                                     tCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataaatctga                                                                                      <  1:2884566‑M1/140‑54 (MQ=255)
                                                          cGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataaatctgataccc                                                                                 >  1:7912848‑M1/1‑82 (MQ=255)
                                                             gCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataaatctgatacccgag                                                                              <  1:9273419‑M1/140‑62 (MQ=255)
                                                             gCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataaatctgatacccgag                                                                              >  2:4020353‑M1/1‑79 (MQ=255)
                                                             gCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataaatctgatacccgag                                                                              >  2:10511657‑M1/1‑79 (MQ=255)
                                                              cGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataaatctgatacccgagg                                                                             >  1:2757945‑M1/1‑78 (MQ=255)
                                                               gggCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataaatctgatacccgaggt                                                                            <  1:3558762‑M1/140‑64 (MQ=255)
                                                                  cAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataaatctgatacccgaggtcaa                                                                         <  1:6914211‑M1/140‑67 (MQ=255)
                                                                  cAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataaatctgatacccgaggtcaa                                                                         <  2:3349585‑M1/140‑67 (MQ=255)
                                                                  cAATTAACAGGGGTTCACTCACGAGATATCCTCCAGTTTCCTGCCAGGAGAATAGGCAACGTCCGGCAAAGAGAatacgtgtaatgaagagacaataacctacagcgtgttgccgtgataaatctgatacccgaggtcac                                                                         <  2:4206914‑M1/140‑67 (MQ=255)
                                                                   aaTTCACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAatacgtgtaatgaagagaaaagaacctaaagcgtgttgccgtgataaatctgatacccgaggtcaac                                                                        <  1:2650474‑M1/140‑68 (MQ=255)
                                                                    aTTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAagccgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataaatctgatacccgaggtcacca                                                                       <  2:763976‑M1/140‑69 (MQ=255)
                                                                    aTTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCAGCATGGAGTATAGGCCACGTCCGGCAAAGAGAatacgtgtactgaagagaaaataacataaagcgtgttgccgtgataaatctgatccccgaggtcaaca                                                                       >  2:8083975‑M1/1‑72 (MQ=255)
                                                                     ttcacagGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataaatctgatacccgaggtcaacag                                                                      <  2:856433‑M1/137‑70 (MQ=255)
                                                                     ttcaCAGGTGTTCACTCATGAGATATCCTCCAGTTTAATGCCTGGAGTATATTCAACGTCCGGCAAATAGATTAAGTGTAATGAAGAGAAAATAACCTAAAGCTTGTTGCCGTGTTAAATATGATACCCGAGGTCTActg                                                                      <  2:6151399/137‑3 (MQ=255)
                                                                     ttAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAatacgtgtaatgaagagacaataacctaaagcgtgttgccgtgataaatctgatacccgaggtcaacag                                                                      <  1:10019698‑M1/140‑70 (MQ=255)
                                                                     ttAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataaatctgatacccgaggtcaacag                                                                      <  1:3714726‑M1/140‑70 (MQ=255)
                                                                         cAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgtt                                                                  <  1:9492738‑M1/140‑74 (MQ=255)
                                                                           ggggTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgt                                                                >  1:2325585‑M1/1‑65 (MQ=255)
                                                                             ggTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtgg                                                              >  2:1420227‑M1/1‑63 (MQ=255)
                                                                               ttCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggtt                                                            >  2:3859694‑M1/1‑61 (MQ=255)
                                                                                 cACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgt                                                          >  2:7035285‑M1/1‑59 (MQ=255)
                                                                                      aTGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcg                                                     >  2:5066121‑M1/1‑54 (MQ=255)
                                                                                        gagaTATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataaatctgatacccgaggtcaacag                                                                      >  1:3864646‑M1/1‑52 (MQ=255)
                                                                                           atatCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatt                                                >  1:5153043‑M1/1‑49 (MQ=255)
                                                                                              tcctccAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttattttt                                             >  1:4437112‑M1/1‑46 (MQ=255)
                                                                                              tcctccAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttattttt                                             >  1:2614912‑M1/1‑46 (MQ=255)
                                                                                              tcctccAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttattttt                                             >  1:639375‑M1/1‑46 (MQ=255)
                                                                                              tcctccAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttattttt                                             >  1:6604410‑M1/1‑46 (MQ=255)
                                                                                              tcctccAGATTCCTGCATGGAGTATAGGCCACGTCCGGCAAAGAGAatacgtgtaatgaagagaacataacctaaatcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttcttttt                                             >  2:10259507‑M1/1‑46 (MQ=255)
                                                                                                ctccAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataaatctgatacccgagttcaacagtgttgtggttgtgatcgttatttttaa                                           >  2:3079424‑M1/1‑44 (MQ=255)
                                                                                                ctccAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatttttaa                                           >  2:11011294‑M1/1‑44 (MQ=255)
                                                                                                ctccAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgagcgttatttttaa                                           >  1:1364466‑M1/1‑44 (MQ=255)
                                                                                                  ccAGTTTCCTGCCTGGAGTATAGGCAACGTCAGGCAAAGAGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataaatctgatccccgaggtcaacagtgttgtgtttgtgagcggtatttttaatt                                         >  1:9738525‑M1/1‑42 (MQ=255)
                                                                                                   cAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatttttaattt                                        >  2:9789540‑M1/1‑41 (MQ=255)
                                                                                                   cAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtgggtgtgatcgttatttttaattt                                        >  2:1751801‑M1/1‑41 (MQ=255)
                                                                                                      tttCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatttttaattttgc                                     >  2:1572014‑M1/1‑38 (MQ=255)
                                                                                                      tttCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatttttaattttgc                                     >  2:1083323‑M1/1‑38 (MQ=255)
                                                                                                       ttCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatttttaattttgct                                    <  1:8064290‑M1/140‑104 (MQ=255)
                                                                                                        tCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgtggtggttgtgatcgttattgttaattttgctc                                   >  1:10132539‑M1/1‑36 (MQ=255)
                                                                                                          ctgcctgGAGTATAGGCAACGTCCGGCAAAGAGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatttttaattttgctcag                                 <  1:143364‑M1/140‑107 (MQ=255)
                                                                                                           tgcctgGAGTATAGGCAACGTCCGGCAAAGAGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatttttaattttgctcagc                                >  1:5496393‑M1/1‑33 (MQ=255)
                                                                                                                  aGTATAGGCAACGTCCGGCAAAGAGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatttttaattttgctcagcaacatgt                         >  1:10664635‑M1/1‑26 (MQ=255)
                                                                                                                       aGGCAACGTCCGGCAAAGAGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatttttaattttgctcagcaacatttgggcg                    <  2:2541567‑M1/140‑120 (MQ=255)
                                                                                                                       aGGCAACGTCCGGCAAAGAGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatttttaattttgctcagcaacatttgggcg                    <  2:5364116‑M1/140‑120 (MQ=255)
                                                                                                                       aGGCAACGTCCGGCAAAGAGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatttttaattttgctcagcaacatttgggcg                    >  1:6485093‑M1/1‑21 (MQ=255)
                                                                                                                          cAACGTCCGGCAAAGAGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatttttaattttgctcagcaacatttgggcggcc                 >  2:3199977‑M1/1‑18 (MQ=255)
                                                                                                                           aaCGTCCGGCAAAGAGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatttttaattttgctcagcaacatttgggcggcca                >  2:2025608‑M1/1‑17 (MQ=255)
                                                                                                                           aaCGTCCGGCAAAGAGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatttttaattttgctcagcaacatttgggcggcca                >  2:6855424‑M1/1‑17 (MQ=255)
                                                                                                                            aCGTCCGGCAAAGAGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatttttaattttgctcagcaacatttgggcggccat               >  2:9492431‑M1/1‑16 (MQ=255)
                                                                                                                             cGTCCGGCAAAGAGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatttttaattttgctcagcaacatttgggcggccatc              <  1:1083665‑M1/140‑126 (MQ=255)
                                                                                                                             cGTCCGGCAAAGAGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatttttaattttgctcagcaacatttgggcggccatc              <  2:5265252‑M1/140‑126 (MQ=255)
                                                                                                                              gTCCGGCAAAGAGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatttttaattttgctcagcaacatttgggcggccatcc             >  1:2081547‑M1/1‑14 (MQ=255)
                                                                                                                              gTCCGGCAAAGAGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgagcgttatttttaattttgctcagctacatttgggcggccatcc             >  2:637151‑M1/1‑14 (MQ=255)
                                                                                                                              gTCCGGCAAAGAGAatacgtgtaatgaagagaaaataacataaagcgtgttgccgtgataaatctgataccagaggtcaacagtgtggtggttgtgatcgttatttttaattttgctcagcaacagttgggcggccatcc             >  2:373961‑M1/1‑14 (MQ=255)
                                                                                                                                ccGGCAAAGAGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatttttaattttgctcagcaacatttgggcggccatccga           >  2:2873155‑M1/1‑12 (MQ=255)
                                                                                                                                 cGGCAAAGAGCatccgtgtaatgaagagaaaataccctaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatatttacttgtgctcagcatcatttgggcggccatccgac          <  2:8953787‑M1/140‑130 (MQ=255)
                                                                                                                                 cGGCAAAGAGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatttttaattttgctcagcaacatttgggcggccatccgac          <  2:4741522‑M1/140‑130 (MQ=255)
                                                                                                                                  ggCAAAGAGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgctcgttatttttaattttgctcagcaacatttgggcggccatccgacc         <  2:5748591‑M1/140‑131 (MQ=255)
                                                                                                                                  ggCAAAGAGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatttttaattttgctcagcaacatttgggcggccatccgacc         <  1:7422920‑M1/140‑131 (MQ=255)
                                                                                                                                   gCAAAGAGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatttttaattttgctcagcaacatttgggcggccatccgacca        >  1:9037663‑M1/1‑9 (MQ=255)
                                                                                                                                    cAAAGAGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatttttaattttgctcagcaacatttgggcggccatccgaccaa       >  1:592461‑M1/1‑8 (MQ=255)
                                                                                                                                      aaGAGAatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatttttaattttgctcagcaacatttgggcggccatccgaccaata     <  2:3522901‑M1/140‑135 (MQ=255)
                                                                                                                                         agaatacgtgtaatgaagagaaaataacctaaagcgtgttgccgtgataaatctgatacccgaggtcaacagtgttgtggttgtgatcgttatttttaattttgctcagcaacatttgggcggccatccgaccaatatca  >  1:1204771‑M1/1‑3 (MQ=255)
                                                                                                                                           |                                                                                                                                         
CGGTAATCAGCCCATGACGGTTAGCCATTCCCGGCAGTAAAAACAGTTCTGTGTCCGGCGTGCGGGCAATTAACAGGGGTTCACTCATGAGATATCCTCCAGTTTCCTGCCTGGAGTATAGGCAACGTCCGGCAAAGAGA‑‑‑‑‑‑‑‑‑‑‑GAAGAGAAAATAACTTAAAGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAATATCA  >  NZ_CP025268/4491902‑4492167

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.