BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NZ_CP025268	1292725 =	604 (0.900)	174 (0.310)	64/232	3.4	37.2%	intergenic (+182/+2)	narI/CXP41_RS06830	respiratory nitrate reductase subunit gamma/RtT sRNA
*	?	NZ_CP025268	= 1293258	76 (0.130)	174 (0.310)	64/232	3.4	37.2%	intergenic (‑44/+3)	CXP41_RS06840/CXP41_RS06845	RtT sRNA/tRNA‑Tyr
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 168 total aligned reads displayed.

CGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGCCGAACCTTAATCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTGGGGGAAGGA  >  NZ_CP025268/1293120‑1293396

cGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGTCGCTCGAGCCGAACCTTAGTAGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTg                                                                                                                                           >  2:5219511/1‑140 (MQ=255)

cGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTg                                                                                                                                           <  1:4884429/140‑1 (MQ=255)

cGCCATTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGTCGAACCTTCGTCGAAGCTTCTCCTCGTTCACCGCATGGGCAGTATATTTGATTGCGGATTCGCTTGAGAGTTCTGGGACTTTTGAAAGTg                                                                                                                                           <  1:5673459/140‑1 (MQ=11)

 gCCCTTCGGGTCGTTGCCTGCGGCCACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTACCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGACAGTGa                                                                                                                                          <  1:8094367/140‑1 (MQ=11)

 gCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGACTATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGa                                                                                                                                          <  1:3967124/140‑1 (MQ=255)

 gCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGa                                                                                                                                          <  1:3626975/140‑1 (MQ=255)

 gCCCTTCGGGTCGTTGCCTGCGGCAACGCTCGCTCGCTGACGCTCGTGCCGAACCTTATTGGAAGCTTATAATCCATCCCCGCATGGGCATTATATTTTTTTTCGGATTGGGTTGTGAGTTGAGGGGCTTTTGTAAGTgt                                                                                                                                          >  1:5843880/1‑139 (MQ=2)

  cccTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGAt                                                                                                                                         <  1:2027855/140‑1 (MQ=255)

    cTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGAtgg                                                                                                                                       <  1:8382398/140‑1 (MQ=255)

    cTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGAtgg                                                                                                                                       <  1:6167536/140‑1 (MQ=255)

      tCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGTCGCTCGAGTCGAACCTTTGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTTATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGAtggtg                                                                                                                                     <  1:9004029/140‑1 (MQ=11)

      tCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCAAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCGTGGGCAGAATATTTGTTTGCGGATTCGTTTGGTAGTTCAGGGTCTTTTGAAAGTGAtggtg                                                                                                                                     >  2:8549292/1‑140 (MQ=11)

       cGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGAtggtgg                                                                                                                                    <  2:2160634/140‑1 (MQ=255)

       cGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGAtggtgg                                                                                                                                    <  1:2100479/140‑1 (MQ=255)

        gggTCGTTGCGTGCGGCAACGCTCTCTCGCTGTCGCTCGTGCCGAACCTTAGTCGAAGCTTCTCTTCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGCAAGTGAtggtggt                                                                                                                                   <  2:11298523/140‑1 (MQ=11)

        gggTCGTTGCCTGCGGCAACGCTCTCTCGCTGTCGCTCCAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCTTGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGAtggtggt                                                                                                                                   <  2:10448071/140‑1 (MQ=255)

        gggTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGTTTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGAtggtggt                                                                                                                                   <  1:2321966/140‑1 (MQ=255)

        gggTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGAtggtggt                                                                                                                                   <  1:7703700/140‑1 (MQ=255)

        gggTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGAtggtggt                                                                                                                                   <  2:3184590/140‑1 (MQ=255)

        ggctCGGTGCCTGCGTCAAAGCTCTCTCGCTGTCGCTCTAGCCGAACCTTTGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGAtggtggt                                                                                                                                   <  2:3567749/137‑1 (MQ=11)

         ggTCGTTGCCTGCGGCAACGCTCTCTCGCTGTCGCTCGAGCCGAACCTTTGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGAtggtggtg                                                                                                                                  <  1:9393885/140‑1 (MQ=255)

          gTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATTGGCAGAAAATTTGATTGCGGATTCGCTTTAGAGGTCAGGGACTTTTGAAAGTGAtggtggtgg                                                                                                                                 >  2:2948559/1‑140 (MQ=11)

           tCGTTGCCTGCGGCAACGCTCTCTCGCTGTCGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCTTGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTggg                                                                                                                                <  1:11148919/140‑1 (MQ=255)

           tCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTTGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGAATTTTGAAAGTGATGGTGGTggg                                                                                                                                <  1:2743932/140‑1 (MQ=255)

           tCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACATTAGTCGAAGCTTCTCATCCTTCCCCTCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGAATTTTGAAAGTGATGGTGGTggg                                                                                                                                <  1:3587992/140‑1 (MQ=11)

           gcGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCGTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCTGGGACTTTTGAAAGTGATGGTGGTggg                                                                                                                                <  2:2483179/139‑1 (MQ=255)

             ggtGCCTGCGGCTACGCTCTCTCGCTTACGCTCGAGCCGATACTGAGTCGAATCTTCTCATGCGTCCCCGATTGGGCAGATTTTTTGATTGCGGAGTCGGTTGAGATTTCATGGAATTATGTAAGTGATGGTGGTggggg                                                                                                                              <  2:1748825/138‑1 (MQ=2)

             gTTGCCTGCGGCAACGCTCTCTCGCTGTCGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTggggg                                                                                                                              <  2:2812432/140‑1 (MQ=255)

             gTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCTTGGGCAGAATATTTGTTTGCGGATTCGCTTGAGAGTTCAGTGACTTTTGTAAGTGATGGTGGTggggg                                                                                                                              <  1:2877028/140‑1 (MQ=11)

             gTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGTGTTCAGGGACTTTTGAAAGTGATGGTGGTggggg                                                                                                                              <  2:1240977/140‑1 (MQ=255)

             gTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTggggg                                                                                                                              <  1:7159541/140‑1 (MQ=255)

             gTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTggggg                                                                                                                              <  1:6331352/140‑1 (MQ=255)

             gTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTggggg                                                                                                                              <  1:5031474/140‑1 (MQ=255)

             gTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTggggg                                                                                                                              <  1:3941776/140‑1 (MQ=255)

             gTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTggggg                                                                                                                              <  2:6300697/140‑1 (MQ=255)

             gTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTggggg                                                                                                                              <  2:6306090/140‑1 (MQ=255)

             gTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTggggg                                                                                                                              <  2:8749857/140‑1 (MQ=255)

             gTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCATTGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGAGTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTggggg                                                                                                                              <  2:9868568/140‑1 (MQ=11)

             gTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCCAGCCGAACCTTAGACGAAGCTTCTCATCCTTCCCCGCATGGGCATAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGAGATGGTGGTggggg                                                                                                                              <  2:7645762/140‑1 (MQ=11)

             gTTGCCTGAGTCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTATTCGAAGCTTAACATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGTTGGTggggg                                                                                                                              <  2:3784399/140‑1 (MQ=11)

               tGCCTGCGGCAACGCTCTCTCGCTGTCGCTCGAGCCGAACCTTAGTCGAAGCTTCTCAACCTTCCCCCCAAGGGCAGAATAATTTATTTCGGATTAGCTTGAGAGTTCAGGGACTTTTGAAAGTGATTGTGGTGGGGGaa                                                                                                                            >  2:9004028/1‑140 (MQ=11)

               tGCCTGCGGCAACGCTCTCACGCTGACGCTCGAGCCGAACCATAGTCGAAGCTTCACATCCTTCCCCGCAAGGGCAGAATATTTGATTTCGGAATAACTTGAGAGTTAAGGGTCGTTAGAAAATGATGGTGGTgggggca                                                                                                                            >  2:4263651/1‑138 (MQ=11)

                  cTGCGGCAACGCTCTCTCGCTGTCGCTCGAGCCGAACCTTCGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGa                                                                                                                         <  1:9498314/140‑1 (MQ=255)

                  cTGCGGCAACGCTCTCTCGCTGACGCTCGCGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGATTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGa                                                                                                                         <  2:8312713/140‑1 (MQ=255)

                  cTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGa                                                                                                                         <  1:8546556/140‑1 (MQ=255)

                  cTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGa                                                                                                                         <  2:4704074/140‑1 (MQ=255)

                     cGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCAGGGGCAGAAAATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGAtta                                                                                                                      >  2:1116993/1‑139 (MQ=255)

                      ggCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGAttac                                                                                                                     <  2:8695272/140‑3 (MQ=255)

                       gCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTTGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGAttact                                                                                                                    <  2:10192298/140‑4 (MQ=255)

                        cAACTCTCTCTCGCTGACGCTCTTTCCTCACCTTCGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGATTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGAttactc                                                                                                                   <  1:9729539/140‑5 (MQ=11)

                           cGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGAttactcagc                                                                                                                <  1:10442830/140‑8 (MQ=255)

                                         cgcCCGAGCCTACGCTTAGTCGACGCTTCTCCTCCCACCCCGCCTGGGCCGAATCTATGATTCCGGCTGCGCTTGAGTGTTCCGTGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGAc                                                                                                  <  1:4888975/140‑1 (MQ=12)

                                             ctagtcGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTCATTGCGGATTCGTTTGCCAATTCCGGGCCTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCa                                                                                              <  1:3741505/135‑1 (MQ=14)

                                                           gtCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAATTCAGGGACTTTTGAAAGTGATGGTGGTggggg                                                                                                                              >  1:8561749/2‑94 (MQ=18)

                                                               aaGCTTCTCATCCTTCCCCGCTTGGGCAGAATATTTGATTGCGGATTCGTTTGAGAATTCCGGGGCTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGACGTCGATGACGGCTGAGTTACAGTCTGCTgcc                                                                            >  1:11253034/1‑140 (MQ=17)

                                                               aaGCATCTCATCCTTCCCCGCATGGTCAGAATATTTAATAGCGGATTCGTTGGGAAGTTCAGGGACTTTTTAAATTGATGGTGGAGGGGGAAGGATTCGAACCTTAGAAGTAGATGACGGCAGAGTTACAGTCTGCTccc                                                                            >  1:10653107/1‑140 (MQ=14)

                                                                                        gCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCATCGTCGGCGATGACGGCAGGGGTACAGGCGGCGCGCAGTGGCCGCTCGGGGACCccacccc                                                   >  1:2755999/1‑138 (MQ=18)

                                                                                              tatTTGATTGCGGATTCGTTTGAGAATTCCGGGGCTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCAGCACCCAATGGCCGCTCGGGACCCCCACCAGGGGTaa                                             >  2:4755270/1‑140 (MQ=18)

                                                                                                  tcaTTGCGGATTCGATTGTTAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCa                                         <  2:6394925/138‑1 (MQ=255)

                                                                                                        cGGATTCGTTTGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCTTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAAtttt                                   <  1:6773742/140‑1 (MQ=255)

                                                                                                        cGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAAtttt                                   <  1:4539682/140‑1 (MQ=255)

                                                                                                                ttgggaagTTCAGGGTCTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAAt                           <  2:5719505/134‑1 (MQ=255)

                                                                                                                ttgggaagTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAAt                           <  1:743179/134‑1 (MQ=255)

                                                                                                                ttgggaagTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAAt                           <  2:8371445/134‑1 (MQ=255)

                                                                                                                ttgggaagTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAAt                           <  2:8764129/134‑1 (MQ=255)

                                                                                                                 tggccagTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATg                          <  1:7037519/135‑1 (MQ=255)

                                                                                                                  gggaagTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGc                         >  1:7242975/5‑140 (MQ=255)

                                                                                                                   gtaagTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCt                        <  1:8599080/137‑1 (MQ=255)

                                                                                                                   ggaagTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCt                        <  2:7332023/137‑1 (MQ=255)

                                                                                                                   ggaagTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCt                        <  1:6501190/137‑1 (MQ=255)

                                                                                                                   ggaagTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCt                        <  1:8803620/137‑1 (MQ=255)

                                                                                                                   ggaagTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCt                        <  1:3905090/137‑1 (MQ=255)

                                                                                                                    gaagTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATGTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCtt                       <  1:9033358/138‑1 (MQ=255)

                                                                                                                     aagTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAAATCCAATTTTGAGGGAAtcagtg                      >  2:14719/2‑135 (MQ=18)

                                                                                                                       gTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTgag                    <  1:3368963/140‑1 (MQ=255)

                                                                                                                       gTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTgag                    <  1:4438273/140‑1 (MQ=255)

                                                                                                                       gTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCATgag                    <  2:11318438/140‑1 (MQ=255)

                                                                                                                        ttatctgACTTTTTAAAGAGATGGGGGTGGGGGTAGGATTCTAACCTTCGAAGTCGATGTCTGCATATTTACAGTCTGCTCCCTTTGGCCGCTCGGTAACCCCACCAGGGGTAATTCAAATTTTGATGTAATGCTTgaga                   <  1:10838072/134‑1 (MQ=18)

                                                                                                                        ttCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGTAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTgaga                   <  2:3533857/140‑1 (MQ=255)

                                                                                                                        ttCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTgaga                   <  1:135820/140‑1 (MQ=255)

                                                                                                                        ttCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTgaga                   <  2:5544240/140‑1 (MQ=255)

                                                                                                                        ttCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTgaga                   <  1:9263365/140‑1 (MQ=255)

                                                                                                                        ttCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTgaga                   <  1:1252883/140‑1 (MQ=255)

                                                                                                                        ttCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTgaga                   <  1:2698306/140‑1 (MQ=255)

                                                                                                                         tCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGTGAt                  <  2:6054442/140‑1 (MQ=255)

                                                                                                                         tCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGAt                  >  2:6943753/1‑140 (MQ=255)

                                                                                                                          cAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGAtg                 <  1:11374965/140‑1 (MQ=255)

                                                                                                                           cgggACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGAtgg                <  1:11474050/139‑1 (MQ=255)

                                                                                                                             ggACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCGTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGAtggtg              >  1:7617697/1‑140 (MQ=255)

                                                                                                                               aCTTTTGACAGTGATGGTGGTGGGGGAAGGATTCTAACCTTCGAAGTCGATGACTGCAGTTTTACATTATGCTCACTTTGGCCTCTCTTTATCCCCAGGAGTGGTAATTCAGATTTTGATGTATTGCATGAGAtggtggt            <  1:692920/140‑1 (MQ=12)

                                                                                                                               aCTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGAtggtggt            <  2:6956850/140‑1 (MQ=255)

                                                                                                                               aCTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGAtggtggt            <  2:4377699/140‑1 (MQ=255)

                                                                                                                                  tttGAGAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGGTATTGAAATTTTGTGGGATTGAGGGAGATGGTGGAggg         >  2:3684455/1‑140 (MQ=14)

                                                                                                                                  tttGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGTCCGCTCGGGAACCCCACCAGGGGGAATTCATATTTTGAGGTAAGAAGTGAGATGGTGGTggg         >  2:2013061/1‑140 (MQ=18)

                                                                                                                                  tttGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCATTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTTAGGTAATGCTTGAGAtggtggtgtg         >  2:7675593/1‑138 (MQ=255)

                                                                                                                                    tGATAGTGATGGTGGTGGGGGAAGGAGTCGAACCTTCGAAGTCGAGGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTggggg       <  1:4314785/140‑1 (MQ=255)

                                                                                                                                    tGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTggggg       <  2:3977999/140‑1 (MQ=255)

                                                                                                                                     gAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTGGGGGa      <  2:1605460/140‑1 (MQ=255)

                                                                                                                                       aaGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATATACAGTCTGCTCCCTGTGGCCCCACGGGAACCCCACCAGGGGTAATTCAAATTTAGAGGTAATGCTTGAGATGGTGGGGGGGGAAg    >  1:2775327/1‑140 (MQ=21)

                                                                                                                                         gTGAGGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTGGGGGAAGGa  <  1:2635035/140‑1 (MQ=255)

CGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGCCGAACCTTAATCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTGGGGGAAGGA  >  NZ_CP025268/1293120‑1293396

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.