Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NZ_CP0252682,233,2480GC22.8% 418.1 / 68.7 197intergenic (+148/+225)yohP/dusCsmall membrane protein YohP/tRNA dihydrouridine(16) synthase DusC
Reads supporting (aligned to +/- strand):  ref base G (59/93);  new base C (45/0);  total (104/93)
Fisher's exact test for biased strand distribution p-value = 1.09e-15
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 197 total aligned reads displayed.

ATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCAGGGGGCGG‑CCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCATGTGGGCTGCCCCGGCCTTCAGGGAAC  >  NZ_CP025268/2233115‑2233386
                                                                                                                                       |                                                                                                                                          
atcaGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCAGGGGGCGG‑CCAAAAGCCGCCCCCCCCAGCACCCCCCGGctca                                                                                                                                      >  1:11382907/1‑139 (MQ=37)
 tcaGGTCCGAAAATAACGAGAATATTTCAGTCTCTCAGCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGCGGCGGGGGGGGGCCCTAGCGCCCCCCCCCCCCCACCCCCCGGGcag                                                                                                                                       >  1:256513/1‑138 (MQ=255)
     gTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCAGGGGGCGG‑CCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGa                                                                                                                                 <  2:1976950/140‑1 (MQ=255)
        cGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCAGGGGGCGG‑CCAATCGCCGCCGCCCCCAGCACCCCCGGGCTCTGGCGAACa                                                                                                                              >  2:6146222/1‑140 (MQ=255)
        cGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAAGCACTGGCGCAAGGAGCGC‑GCGGGGGGCGG‑CCAAACGCCGCCGCCCCCGGCCCCCCCCGGCGCGGGCGACCa                                                                                                                              >  1:2906046/1‑140 (MQ=25)
          aaaaTAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCAGTGGGCGG‑GCAAACGCCGCCGCCCCCCGCCCCCCCGGGCTCAGGCGAACaaa                                                                                                                            >  2:540765/1‑140 (MQ=25)
          aaaaTAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCAGGGGGCGG‑CCAATCGCCGCCGCCCCCAGCACCCCCGGGCTCTGGCGAACaaa                                                                                                                            >  2:2892533/1‑140 (MQ=255)
              tAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCAGGGGGCGG‑CCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATcg                                                                                                                        <  2:5974920/140‑1 (MQ=255)
               aaCGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GGGGGGGGCGG‑CCCAACGCCGCCCCCCCCAGCACCCCCCGGCGCAGGGGGACaaaaaagc                                                                                                                       >  1:3531578/1‑136 (MQ=25)
                aCGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCAGGGGGCGG‑CCAATAGCCGCCCCCCCCAGCACCCCCGGGCTCTGGCGAACAAAATcgcc                                                                                                                      >  2:6077928/1‑140 (MQ=255)
                  aggaATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCTGGGGGCGG‑CCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATcgccgc                                                                                                                    <  2:1404699/138‑1 (MQ=255)
                    gaATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCAGGGGGCGG‑CCAATCGCCGCCGCCCCCAGCACCCCCCGGCGCAGGCGAACAAAATacccgcgg                                                                                                                  >  2:4561451/1‑138 (MQ=21)
                              gTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCAGGGGGCGG‑CCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGccc                                                                                                        <  2:4498847/140‑1 (MQ=255)
                              gTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCAGGGGGCGG‑CCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGccc                                                                                                        <  2:3723933/140‑1 (MQ=255)
                              gTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCAGGGGGCGG‑CCAATAGCCCCCCCCCCCCGCCCCCCCCGGCTCAGGCGAAAAAAAAAACCGCGGCGCCGTGccc                                                                                                        >  1:6773585/1‑140 (MQ=18)
                               tctctcATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCAGGGGGCGG‑CCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCt                                                                                                       <  2:2452352/140‑1 (MQ=255)
                               tctctcATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCAGGGGGCGG‑CCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCt                                                                                                       <  1:6681245/140‑1 (MQ=255)
                               tctctcATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCAGGGGGCGG‑CCAAACACCGCCCCCCCCACCACCCCCCGGCCAAGGCGAACAAAAAATCCGCAGCGCCGTGccca                                                                                                       >  1:851329/1‑139 (MQ=18)
                                     aTCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCAGGGGGCGG‑CCAAGCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCtt                                                                                                 <  2:270598/140‑1 (MQ=255)
                                         tGTTGCTCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCAGGGGGCCG‑CCAAACGCCGCCCCCCCCAGCCACCCCCGGCTCAGGCGAACAAAATCCCCGCTGCGCGGTGCCCACCGCTTATcc                                                                                             >  2:3974431/1‑140 (MQ=18)
                                         tGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCAGGGGGCGG‑CCAATCGCCCCCCCCCCCAGCACCCCCCGGCACTGGCGCACAAAAACGCCGCAGCGCGGTGCCCACGGCTAAtac                                                                                             >  2:10962593/1‑138 (MQ=18)
                                           ttGCGCTCCTGTCATGTGCATTGCTTCATATCATCACTGGCGCAAGGAGCGC‑GCCGGGGGCGG‑CCACTCGCCGCCGCCCCCTGCCCCCCCGGGCTAAGGCGACAAAAAACGCCGCGGGGCGGGGCCCGCGGCGGATCCCt                                                                                           >  2:8302928/1‑140 (MQ=17)
                                           ttGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCCGGGGGCGG‑CCCAAAGCCGCCGCCCCCCCCCCCCCCCGGGTAAGGGGCACAAAAACGCCGGGGCGCGGGGGCCCCGGCGTAAcccg                                                                                           >  2:2119975/1‑139 (MQ=16)
                                           ttGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCAGGGGGGGG‑GCCATCGCCCCCCCCCCCATCACCCCCCGGCACAGGCCCACAAAAAACCCGCAGCGCCGTGCCCACGGCATATacca                                                                                           >  2:1651930/1‑139 (MQ=16)
                                             gcgcTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCAGGGGGCGG‑CCCATCGCCGCCGCCCCCCGCACCCCCCGGCGCAGGCGAACAAAAACCCCGCGGCGCGGTGCCCCCGGCTTATCCCATa                                                                                         >  2:6486007/1‑140 (MQ=18)
                                             gcgcTCCTGTCATGTGCATTGCTTCATATAAGCACTGGCGCAAGGAGCGC‑GCAGGGGGCGG‑CCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTa                                                                                         <  1:1447128/140‑1 (MQ=255)
                                              cgcTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCAGGGGGCGG‑CCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGTGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTAc                                                                                        <  1:4880550/140‑1 (MQ=255)
                                              cgcACCTGTCATGTGCTTTGCTTCATATAATCACGGGCGCATGGAGCGC‑GCAGGGGGCGG‑CCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTAc                                                                                        <  1:5028480/140‑1 (MQ=255)
                                               gcTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCAGGGGGCGG‑CCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACg                                                                                       >  2:10476600/1‑140 (MQ=255)
                                                cTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCAGGGGGCGG‑CCAAACGCCGCCGCCCCCAGCACCCCCGGGCTATGGCGAACAAAAAACCCGCTGCGCGGTGCCCTCGGCATATCCCATaacg                                                                                      >  2:7008351/1‑137 (MQ=18)
                                                cTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCAGGGGGCGG‑CCAAACGCCGCCGCCCCCAGCACCCCCCGGCTCAGGCGAACAAAATCCCCGCAGCGCCGTGCCCACGGCATATACCATAAgg                                                                                      >  2:10145684/1‑140 (MQ=18)
                                                cTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCAGGGGGCGG‑CCAAACCCCCCCCCCCCCAGCCCCCCCCGGCACAGGCGAACAAAAAACCCGCGGCGCGGTGGCCCCGGCCGATCCCGTACgg                                                                                      >  2:5199475/1‑140 (MQ=16)
                                                cTCCTGTCATGTGCATTGCTTCATATAAGCACTGGCGCAAGGAGCGC‑GGGGGGGGCGG‑CCCAAACCCCCCCCCCCCCCCCCCCCCCCGCCCCGGGGGACAAAAACACCGCCGCGCGGGGCCCGCGGCGTATCCCCTActg                                                                                      >  1:8250928/1‑138 (MQ=12)
                                                  ccTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCAGGGGGCGG‑CCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCt                                                                                    <  2:3297268/140‑1 (MQ=255)
                                                   cTGTCATGTGCATTGCTTCATATAATGACTGGCGCAAGGAGCGC‑GCTCGGGGCGG‑GCAATCGCCGCCGCCCCCAGCACCCCCGGGCTCTGGCGCACAAAATCGCCGCGGCGCGGTGCCCTCGGCATATACCATACGGcaa                                                                                   >  2:11031484/1‑138 (MQ=17)
                                                     gTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGCGCGC‑GCAGGGGGCCG‑CCCAACGCCCCCCCCCCCGGCACCCCCCGGCGCAGGCGACCAAAATAGCCCCGGCGCGGGGCCCCCCGCGTATCCCCTACCGCGAcc                                                                                 >  2:8820873/1‑140 (MQ=255)
                                                     gTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCAGGGGGCGG‑CCAAACGCCGCCGCCCCCAGCACCCCCGGGCTCTGGCGAACAAAAACGCCGCTGCGCGGTGCCCTCGGCTTATACCATACGGCTAcc                                                                                 >  2:1952700/1‑140 (MQ=17)
                                                     gTCATGTGCAGTGCTTCATAGAATCACTGGCGAAAGGAGCGC‑GCAGGGGGCGG‑GGATTCGCAGCAGCACCCCGCCCGCCCGGGCTCTTCCGAACAAAATAGCCGCAGCGCGGTGCCCTCCGCTTATAGCTTAAGGCGAcc                                                                                 >  2:7598910/1‑140 (MQ=9)
                                                      tCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCAGGGGGCGG‑CCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCg                                                                                <  1:9543393/140‑1 (MQ=255)
                                                             cATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCAGGGGGCGG‑CCCATCGCCGCCGCCCCCAGCACCCCCCGGCACTGGCGAACAAAATCGCCGCAGCGCGGTGCCCAAGGCTTATCCCATACGGCTACCGGGTCggg                                                                         >  2:7684233/1‑140 (MQ=14)
                                                             acttGCTTCCTATAATCACTGGCGCAAGGCGCGC‑GCAGGGGGCGG‑CCCAACGCCGCCGCCCCCTGCACCCCAGGGATCTGTCTGACAAACTCTCAGCAGCGCGGTGGCCACCGCTTTGGCCCTACGGCTAGCgggggggg                                                                         >  2:6642010/3‑135 (MQ=9)
                                                               ttGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCAGGGGGCGG‑CCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGgcg                                                                       <  2:730657/140‑1 (MQ=255)
                                                               ttGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCAGGGGGCGG‑CCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGgcg                                                                       <  1:9969495/140‑1 (MQ=255)
                                                               ttGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCAGGGGGCGG‑CCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGgcg                                                                       <  1:8337039/140‑1 (MQ=255)
                                                                tGCTTCATATAATCCCTGGCGCAAGGAGCGC‑GCAGGGGGCGG‑CCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGgcgc                                                                      <  1:4256376/140‑1 (MQ=255)
                                                                tGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCATGGGGCGG‑CCAAACGCCGCCCCCCCCAGCACCCCCCGGCTCAGGCGAACAAAAACGCCGCGTCGCGGTGCCCACGGCATATCCCATACGGCAACCCGGTAGGgcgc                                                                      >  2:7055594/1‑140 (MQ=14)
                                                                tGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCAGGGGGCGG‑CCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGgcgc                                                                      <  2:6172120/140‑1 (MQ=255)
                                                                tGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCACGGGGCGG‑CCCAACGCCCCCCCCCCCAGCACCCCCCGGCTATGGCGAACAAAAAAACCCCTGCGCGGTGCCCACCGCTAAAACCATAACGCTAACCGGTAGGgcgc                                                                      >  2:9871813/1‑140 (MQ=9)
                                                                  cTTCATATAATCACTGGCGCAAGGAGCGC‑GCAGGGGGCGG‑CCAATCCCCGCCCCCCCCAGCACCCCCCGGCACATGCGAACAAAAAACCCGCAGCGCGGTGCCCACCGCATAAACCATACCGCAACCCCGTAGGgcgcca                                                                    >  2:430656/1‑138 (MQ=9)
                                                                  cTTCATATAATCACTGGCGCAAGGAGCGC‑GCAGGGGGCGG‑CCAATAGCCCCCGCCCCCATCACCCCCGGGCTCTGGCGAAAAAAAAAGCCCCTGCGCGGTGCCCACCGCATATACCTTAAGGCTAACGGGTAGGGGGCGa                                                                    >  2:3843828/1‑140 (MQ=14)
                                                                     cATATAATCACTGGCGCAAGGAGCGC‑GCAGGGGGCGG‑CCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGCCTAACGGGTCGGGCGCGAGGt                                                                 <  2:1066670/140‑1 (MQ=255)
                                                                       tataATCACTGGCGCAAGGAGCGC‑GCAGGGGGCGG‑CCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTaa                                                               <  2:4421682/140‑1 (MQ=37)
                                                                         caaTCACTGGCGCATGGAGCGC‑GCTGGGGGCGG‑CCAATCGCCGCCGCCCCCTGCACCCCCGTGCTCTGGCGCACAAAATCGCCTCTGCGCGGTGCACTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGATGTAACa                                                             <  1:5822292/139‑1 (MQ=11)
                                                                          aaTCACTGGCGCAAGGAGCGC‑GCAGGGGGCGG‑CCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACAt                                                            <  2:566078/140‑1 (MQ=34)
                                                                          aaTCACTGGCGCAAGGAGCGC‑GCAGGGGGCGG‑CCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACAt                                                            <  1:5797711/140‑1 (MQ=34)
                                                                           aTCACTGGCGCAAGGAGCGC‑GCTGGGGGCGG‑CCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATc                                                           <  1:7798646/140‑1 (MQ=18)
                                                                            tCACTGGCGCAAGGAGCGC‑GCAGGGGGCGG‑CCAAACGCCCCCGCCCCCAGCACCCCCCGGCTCAGGCGAACAAAATCGCCCCGGCGCGGTGCCCACGGCGTATCCCATACGGCAACCCGGTCGGGCGCGAGGTAAccacc                                                          >  2:866433/1‑136 (MQ=11)
                                                                            tCACTGGCGCAAGGAGCGC‑GCAGGGGGCCG‑CCCATCCCCGCCGCCCCCAGCAACCCCCGGCACAGGCGAACAAAAAAGCCGCAGCGCGGTGCCCTCCGCTAATACCATACGGCTAACCGGTCCGGCGCGAGGTAACaaac                                                          >  2:11181083/1‑137 (MQ=2)
                                                                            tCACTGGCGAATGGAGCGC‑GCAGGGGGCGG‑CAAATCGCGGCCGCCCCATGCACCCCCGGGCTCTGGAGAACAAAATCGCCGCTGCGCGGTGACCTCGGCTTATCCCTTCCGGCTTCCGTGTCGGGCGCGAGGTAACATcc                                                          <  1:9689329/140‑1 (MQ=11)
                                                                               cTGGCGCAAGGAGCGC‑GCCGGGGGCGG‑CCCATCGCCGCCGCCCCCAGCACCCCCCGGCTCTGGCGAACAAAATAGCCGCTGCGCCGTGCCCTCGGCTTATCCCTAACGGCTACCGGGGCGGGCGCGAGGTAACAAcccag                                                       >  2:6691226/1‑138 (MQ=11)
                                                                                  gcgcAAGGCGCGC‑GCAGGGGGCGG‑CCAATCGCCGCCGCCCCCTGCACCCCCGGGCGCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACAACCCAGTaa                                                    >  2:10392488/1‑140 (MQ=255)
                                                                                     cAAGGAGCGC‑GCAGGGGGCGG‑CCAAACGCCGCCGCCCCCAGCACCCCCGGGCTCTGGCGAACAAAATAGCCGCTGCGCGGTGCCCTCGGCGTATCCCATACGGCTACCCGGTCGGGCGCGAGGTAACAAACCAGTAAAAc                                                 >  2:9363286/1‑140 (MQ=11)
                                                                                      aaGGAGCGC‑GCAGGGGGCGG‑CCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAAcg                                                <  2:6773584/140‑1 (MQ=32)
                                                                                       aGGAGCGC‑GCAGGGGGCGG‑CCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAAcgc                                               <  1:691696/140‑1 (MQ=32)
                                                                                            cgc‑gcAGGGGGCGG‑CCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCt                                          <  1:1896696/140‑1 (MQ=32)
                                                                                            cgc‑gcAGGGGGCGG‑CCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCt                                          <  1:11306564/140‑1 (MQ=32)
                                                                                            cgc‑gcAGGGGGCGG‑CCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCt                                          <  2:5349016/140‑1 (MQ=32)
                                                                                            cgc‑gcAGGGGGCGG‑CCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCt                                          <  2:11382906/140‑1 (MQ=32)
                                                                                                 cAGGGGGCGG‑CCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGc                                      <  2:7837531/140‑1 (MQ=32)
                                                                                                 cAGGGGGCGG‑CCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGc                                      <  1:9317935/140‑1 (MQ=32)
                                                                                                  tgggggCGG‑CCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGcc                                     <  2:1768774/139‑1 (MQ=17)
                                                                                                  aGGGGGCGG‑CCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGcc                                     <  2:8424695/140‑1 (MQ=32)
                                                                                                  aGGGGGCGG‑CCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGcc                                     <  2:11431980/140‑1 (MQ=32)
                                                                                                      ggcgg‑cCACTCGCCGCCGCCCCCAGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCcaca                                 <  2:10825077/140‑1 (MQ=17)
                                                                                                      ggcgg‑cCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCcaca                                 <  2:8646878/140‑1 (MQ=32)
                                                                                                      ggcgg‑cCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCcaca                                 <  2:9997285/140‑1 (MQ=32)
                                                                                                      ggcgg‑cCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCcaca                                 <  1:10962594/140‑1 (MQ=32)
                                                                                                      ggcgg‑cCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCcaca                                 <  1:325345/140‑1 (MQ=32)
                                                                                                         gg‑cCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATcc                              <  1:10476601/140‑1 (MQ=32)
                                                                                                         gg‑cCAAAAGCCCCCCCCCCCAGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCGTATACCATACGGCTACCGGGTAGGGCGCGAGGTAACAAACCTGTAAAACGCGCCCACAGCCCACAAcc                              >  2:46890/1‑140 (MQ=11)
                                                                                                          g‑cCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTaa                                                               >  1:1526041/1‑106 (MQ=32)
                                                                                                          g‑cCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCa                             >  2:6883297/1‑140 (MQ=32)
                                                                                                          g‑cCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATAGCCGCTGCGCGGTGCCCTCGGCGTAACCCTTGAGGCAACCCGGTCGGGCGCGAGGGAACATCCCTGGAAAAAGCGCCCGAAGCCCACAACCa                             >  1:6151018/1‑140 (MQ=11)
                                                                                                               aTCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCAtgtg                         >  2:3900188/1‑140 (MQ=32)
                                                                                                               aTCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGGACCATCCCTGTAAAACGCGCCCTCAGCCCACATCCAtgtg                         >  1:10049417/1‑140 (MQ=17)
                                                                                                                  gccgccgccCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCATGTGGGc                      <  1:7621101/140‑1 (MQ=32)
                                                                                                                  gccgccgccCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCATGTGGGc                      <  1:10163177/140‑1 (MQ=32)
                                                                                                                    cgccgccCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCATGTGGGCTg                    >  1:381840/1‑140 (MQ=32)
                                                                                                                     gccgccCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGNCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCATGTGGGCTGc                   <  1:6036125/140‑1 (MQ=17)
                                                                                                                      ccgccCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGAGCCCTCGGCTAATCCCTTACGGCTACCGGGTCGGGCGCGAGTTAACATCCCTGTAAAACGCGCCCTCAGCCCACCTCCATGTGGGCTGcc                  >  2:9122436/1‑140 (MQ=255)
                                                                                                                        gccCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCATGTGGGCTGcccc                <  1:6486008/140‑1 (MQ=32)
                                                                                                                        gccCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCATGTGGGCTGcccc                >  2:1288147/1‑140 (MQ=32)
                                                                                                                        gccCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCATGTGGGCTGcccc                <  2:137137/140‑1 (MQ=32)
                                                                                                                         cccccTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCATGTGGGCTGCCCCg               <  2:1254387/140‑1 (MQ=32)
                                                                                                                              tGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAACCGCGCCCTCAGCCCACATCCATGTGGGCTGCCCCGGCCtt          <  1:966435/140‑1 (MQ=17)
                                                                                                                                cACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCATGTGGGCTGCCCCGGCCGTCa        >  1:4510213/1‑140 (MQ=17)
                                                                                                                                     ccGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCca                                   <  2:9412550/108‑1 (MQ=32)
                                                                                                                                     ccGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCATGTGGGCTGCCCCGGCCTTCAGGGac   >  1:10841699/1‑139 (MQ=17)
                                                                                                                                     ccGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCATGTGGGCTGCCCCGGCCTTCAGGGac   >  2:300874/1‑139 (MQ=17)
                                                                                                                                     ccGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCATGTGGGCTGCCCCGGCCTTCAGGGaa   >  2:9261506/1‑140 (MQ=32)
                                                                                                                                       |                                                                                                                                          
ATCAGGTCCGAAAATAACGAGAATATTTCAGTCTCTCATCCTGTTGCGCTCCTGTCATGTGCATTGCTTCATATAATCACTGGCGCAAGGAGCGC‑GCAGGGGGCGG‑CCAATCGCCGCCGCCCCCTGCACCCCCGGGCTCTGGCGAACAAAATCGCCGCTGCGCGGTGCCCTCGGCTTATCCCTTACGGCTACCGGGTCGGGCGCGAGGTAACATCCCTGTAAAACGCGCCCTCAGCCCACATCCATGTGGGCTGCCCCGGCCTTCAGGGAAC  >  NZ_CP025268/2233115‑2233386

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑