BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NZ_CP025268	1,762,540	T→C	pseudogene (1000/1000 nt)	ldtE ←	L,D‑transpeptidase LdtE

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NZ_CP025268	1,762,540	0	T	C	100.0%	1735.0 / NA	497	pseudogene (1000/1000 nt)	ldtE	L,D‑transpeptidase LdtE
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (275/222); total (275/222)

Only 100 of 498 total aligned reads displayed.

TTCAGGCTGCTAAAGATGACGCAGCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGTTACTGCGTCACGCGTAACATATTCCC‑T‑‑‑‑TGCTTCACCATTCTGCGCTGACTCTACTGAAGGCGCATTGCTGGCTGCGGGAGTTGCTCCACTGCTCACCGAAACCGGATACCCTGCCCGACGATACAACGC  >  NZ_CP025268/1762403‑1762669

  cAGGCTGCTAAAGATGACGCAGCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACt                                                                                                                                    >  2:2913138/1‑140 (MQ=255)

     gctgctAAAGATGACGCAGCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCg                                                                                                                                 <  1:5518789/140‑1 (MQ=255)

     gctgctAAAGATGACGCAGCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACAGTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCg                                                                                                                                 >  2:8690227/1‑140 (MQ=255)

     gctgctAAAGATGACGCAGCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGGGAAGTGAAAATTGGCGCACATTGTGCGCCA‑TTTTTGTTGTCTGCCGTTTACCGCTACTGCg                                                                                                                                 >  2:1048657/1‑140 (MQ=255)

       tgctAAAGATGACGCAGCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTc                                                                                                                               <  2:2213367/140‑1 (MQ=255)

       tgctAAAGATGACGCAGCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTc                                                                                                                               <  2:5849817/140‑1 (MQ=255)

               aTGACGCAGCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTa                                                                                                                        >  1:11152744/1‑140 (MQ=255)

               aTGACGCAGCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTCCTGCGTCACGCGTaa                                                                                                                       >  1:2584278/1‑140 (MQ=255)

               aTGACGCAGCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTac                                                                                                                       >  1:8657974/1‑139 (MQ=255)

                 gACGCAGCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAATATGGCGCACATTGTGCGCCATTTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAAc                                                                                                                      >  2:11005219/1‑140 (MQ=255)

                   cGCAGCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTATATACCGCAAGGAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTGTTTTTGTCTGCCGTTTACCGCTACTGCGTAACGCGTAACata                                                                                                                   >  2:8512805/1‑140 (MQ=255)

                   cGCAGCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACata                                                                                                                   >  2:8104244/1‑140 (MQ=255)

                   cGCAGCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACata                                                                                                                   >  1:6438606/1‑140 (MQ=255)

                   cGCAGCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACata                                                                                                                   >  2:5254609/1‑140 (MQ=255)

                        cTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTccc                                                                                                              >  1:6223016/1‑140 (MQ=255)

                         tCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCC‑t                                                                                                            <  2:7954065/140‑1 (MQ=255)

                           gTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCC‑T‑‑‑‑Tg                                                                                                      <  1:9845317/140‑1 (MQ=255)

                             gCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCC‑T‑‑‑‑TGCt                                                                                                    <  1:9303600‑M1/140‑2 (MQ=255)

                             gCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCC‑T‑‑‑‑TGCt                                                                                                    >  1:4925109‑M1/1‑139 (MQ=255)

                                aaCCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCC‑T‑‑‑‑TGCtctg                                                                                                 <  2:3440687‑M1/140‑5 (MQ=255)

                                     gCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCC‑T‑‑‑‑TGCtctggttca                                                                                            <  2:2523596‑M1/140‑10 (MQ=255)

                                     gCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCC‑T‑‑‑‑TGCtctggttca                                                                                            >  2:10198336‑M1/1‑131 (MQ=255)

                                         cTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCC‑T‑‑‑‑TGCtctggttcaccat                                                                                        <  2:1371976‑M1/140‑14 (MQ=255)

                                          tGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCC‑T‑‑‑‑TGCtctggttcaccatt                                                                                       <  1:2004304‑M1/140‑15 (MQ=255)

                                          tGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCC‑T‑‑‑‑TGCtctggttcaccatt                                                                                       <  1:2454262‑M1/140‑15 (MQ=255)

                                           ggACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCC‑T‑‑‑‑TGCtctggttcaccattc                                                                                      <  1:7822651‑M1/140‑16 (MQ=255)

                                            gACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCC‑T‑‑‑‑TGCtctggttcaccattct                                                                                     >  2:9156824‑M1/1‑124 (MQ=255)

                                                acaTGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCC‑T‑‑‑‑TGCtctggttcaccattctgcgc                                                                                 >  1:3908050‑M1/1‑120 (MQ=255)

                                                acaTGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCC‑T‑‑‑‑TGCtctggttcaccattctgcgc                                                                                 <  1:5624349‑M1/140‑21 (MQ=255)

                                                acaTGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCC‑T‑‑‑‑TGCtctggttcaccattctgcgc                                                                                 <  1:2913139‑M1/140‑21 (MQ=255)

                                                acaTGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCC‑T‑‑‑‑TGCtctggttcaccattctgcgc                                                                                 <  1:3122898‑M1/140‑21 (MQ=255)

                                                 caTGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCC‑T‑‑‑‑TGCtctggttcaccattctgcgct                                                                                >  1:5058000‑M1/1‑119 (MQ=255)

                                                 caTGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCC‑T‑‑‑‑TGCtctggttcaccattctgcgct                                                                                <  1:7571886‑M1/140‑22 (MQ=255)

                                                 caTGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCC‑T‑‑‑‑TGCtctggttcaccattctgcgct                                                                                >  1:3675883‑M1/1‑119 (MQ=255)

                                                 caTGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCC‑T‑‑‑‑TGCtctggttcaccatt                                                                                       <  2:3222109‑M1/133‑15 (MQ=255)

                                                    ggCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCC‑T‑‑‑‑TGCtctggttcaccattctgcgctgac                                                                             <  1:5336730‑M1/140‑25 (MQ=255)

                                                     gCTACTAAATACCTCAAGTAATAGTACCTGTTAAGTGAAAAATGGCGCACATTGTGCGCAA‑TTTTTTTTGTCTGCAGTTTACCGCTACTGCGTCACGCGTAACATATTCCC‑T‑‑‑‑TGCtctggttcaccattctgcgctgact                                                                            <  2:9856834‑M1/140‑26 (MQ=255)

                                                     gCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATGCCC‑T‑‑‑‑GGCtctggttcaccattctgcgctgact                                                                            <  2:9387688‑M1/140‑26 (MQ=255)

                                                     gCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATAGTCCC‑T‑‑‑‑TGCtctggttcaccattctgcgctgact                                                                            <  1:4280393‑M1/140‑26 (MQ=255)

                                                      ctactaAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCC‑T‑‑‑‑TGCtctggttcaccattctgcgctgactc                                                                           >  1:8762317‑M1/1‑114 (MQ=255)

                                                            aaTACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCC‑T‑‑‑‑TGCtctggttcaccattctgcgctgactctactga                                                                     >  1:1676457‑M1/1‑108 (MQ=255)

                                                            aaTACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCC‑T‑‑‑‑TGCtctggttcaccattctgcgctgactctactga                                                                     <  2:2363304‑M1/140‑33 (MQ=255)

                                                             aTACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTGTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCC‑T‑‑‑‑TGCtctggttcaccattctgcgctgagtctactgaa                                                                    >  1:4603413‑M1/1‑107 (MQ=255)

                                                              tACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCC‑T‑‑‑‑TGCtctggttcaccattctgcgctgactctactgaag                                                                   >  1:8443169‑M1/1‑106 (MQ=255)

                                                                ccGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCC‑T‑‑‑‑TGCtctggttcaccattctgcgctgactctactgaaggc                                                                 <  2:10839009‑M1/140‑37 (MQ=255)

                                                                 cGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCC‑T‑‑‑‑TGCtctggttcaccattctgcgctgactctactgaaggcg                                                                >  2:6774399‑M1/1‑103 (MQ=255)

                                                                 cGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGAACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTCACATCATCCC‑T‑‑‑‑TGCtctggttcaccattctgcgctgtctctcctgaaggcg                                                                >  2:8977119‑M1/1‑103 (MQ=255)

                                                                   cAAGTAATAGTACCTGTGAAGTGAAAGATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCC‑T‑‑‑‑TGCtctggttcaccattctgcgctgactctactgaaggcgca                                                              >  2:6188791‑M1/1‑101 (MQ=255)

                                                                   cAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCC‑T‑‑‑‑TGCtctggttcaccattctgcgctgactctactgaaggcgca                                                              >  1:4822649‑M1/1‑101 (MQ=255)

                                                                      gTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCC‑T‑‑‑‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattg                                                           >  1:9029075‑M1/1‑98 (MQ=255)

                                                                      gTAATAGTACCTGTGAAGAGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACAGCGTCACGCGTAACATATTCCC‑T‑‑‑‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattg                                                           >  2:4850535‑M1/1‑98 (MQ=255)

                                                                        aaTAGTACCTGTGAAGTGAAAAATGGCGCCCATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCC‑T‑‑‑‑GGCtctggttcaccattctgcgctgactctactgaaggcgcattgct                                                         <  1:8104245‑M1/140‑45 (MQ=255)

                                                                        aaTAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCC‑T‑‑‑‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgct                                                         <  1:5832274‑M1/140‑45 (MQ=255)

                                                                         aTAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCC‑T‑‑‑‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctg                                                        >  1:1470514‑M1/1‑95 (MQ=255)

                                                                                cTGTGAAGTGAAAGATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCC‑T‑‑‑‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgg                                                 >  1:8877218‑M1/1‑88 (MQ=255)

                                                                                cTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCC‑T‑‑‑‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgg                                                 >  2:3741914‑M1/1‑88 (MQ=255)

                                                                                cTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCC‑T‑‑‑‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgg                                                 >  2:6605829‑M1/1‑88 (MQ=255)

                                                                                cTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCC‑T‑‑‑‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgg                                                 >  1:5194652‑M1/1‑88 (MQ=255)

                                                                                cTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGGCACGCGTATCATATTCCC‑T‑‑‑‑TGCtctggttcaccattctgcgctgactctactgaaggcgacttgctggctgcgg                                                 >  1:10096765‑M1/1‑88 (MQ=255)

                                                                                 tgtgAAGTGAAAAATGGCGCACATTTTGCGCCA‑TTTATTTTGTCTGCCGTTTACCGCAACTGCGTCACGCGTAACAAAATCCCATGCACTGCATCACCAATCTGCGCTGCCTCTACTGAAGGCGCATTGCTGGCTGCggg                                                     >  2:4252305/1‑140 (MQ=255)

                                                                                 tgtgAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCC‑T‑‑‑‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcggg                                                <  2:2051857‑M1/140‑54 (MQ=255)

                                                                                 tgtgAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCC‑T‑‑‑‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcggg                                                >  1:5952679‑M1/1‑87 (MQ=255)

                                                                                 tgtgAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCC‑T‑‑‑‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcggg                                                <  2:3648132‑M1/140‑54 (MQ=255)

                                                                                  gtgaagtgaaAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCC‑T‑‑‑‑TGCtctggttcaccattctgcgctgactctactgaaggcgccttgctggctgcggga                                               >  1:2306222‑M1/1‑86 (MQ=255)

                                                                                  gtgaagtgaaAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCC‑T‑‑‑‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcggga                                               >  2:10662477‑M1/1‑86 (MQ=255)

                                                                                  gtgaagtgaaAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCC‑T‑‑‑‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcggga                                               >  2:10371799‑M1/1‑86 (MQ=255)

                                                                                  gtgaagtgaaAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCC‑T‑‑‑‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcggga                                               >  2:4719457‑M1/1‑86 (MQ=255)

                                                                                  gtgaagtgaaAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCC‑T‑‑‑‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcggga                                               >  1:6637755‑M1/1‑86 (MQ=255)

                                                                                  gtgaagtgaaAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCC‑T‑‑‑‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcggga                                               >  2:7154264‑M1/1‑86 (MQ=255)

                                                                                     aagtgaaAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCC‑T‑‑‑‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagtt                                            >  2:10035116‑M1/1‑83 (MQ=255)

                                                                                     aagtgaaAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCC‑T‑‑‑‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagtt                                            >  2:4383431‑M1/1‑83 (MQ=255)

                                                                                     aagtgaaAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCC‑T‑‑‑‑TGCtctggttcaccattctgcgctgactctacggaaggcgcattgctggctgcgggagtt                                            >  1:9551179‑M1/1‑83 (MQ=255)

                                                                                        tgaaAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCC‑T‑‑‑‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgct                                         <  1:1138243‑M1/140‑61 (MQ=255)

                                                                                         gaaAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCC‑T‑‑‑‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctc                                        <  2:7544829‑M1/140‑62 (MQ=255)

                                                                                          aaaaaTGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCC‑T‑‑‑‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctcc                                       >  1:10241778‑M1/1‑78 (MQ=255)

                                                                                          aaaaaTGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCC‑T‑‑‑‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctcc                                       >  1:10788946‑M1/1‑78 (MQ=255)

                                                                                           aaaaTGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCC‑T‑‑‑‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctcca                                      <  1:1201885‑M1/140‑64 (MQ=255)

                                                                                                  cgcACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCC‑T‑‑‑‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctca                               >  1:9708220‑M1/1‑70 (MQ=255)

                                                                                                  cgcACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCC‑T‑‑‑‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctca                               >  1:3251465‑M1/1‑70 (MQ=255)

                                                                                                     acaTTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCC‑T‑‑‑‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccg                            <  2:5487719‑M1/140‑74 (MQ=255)

                                                                                                     acaTTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCC‑T‑‑‑‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccg                            <  1:7054414‑M1/140‑74 (MQ=255)

                                                                                                      caTTGTGCGCCA‑‑ATTTTTTGTCGGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCC‑T‑‑‑‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaa                          <  1:11000054‑M1/140‑76 (MQ=255)

                                                                                                       aTTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCC‑T‑‑‑‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaa                          <  2:8251445‑M1/140‑76 (MQ=255)

                                                                                                         tgtgCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCC‑T‑‑‑‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggaggtgctccactgctcaccgaaac                        >  1:10441043‑M1/1‑63 (MQ=255)

                                                                                                           tgCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCC‑T‑‑‑‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccg                      <  2:4152167‑M1/140‑80 (MQ=255)

                                                                                                           tgCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCC‑T‑‑‑‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccg                      >  1:7213899‑M1/1‑61 (MQ=255)

                                                                                                           tgCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCC‑T‑‑‑‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccg                      >  2:5097322‑M1/1‑61 (MQ=255)

                                                                                                            gcgcCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCC‑T‑‑‑‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccgg                     <  2:3365785‑M1/140‑81 (MQ=255)

                                                                                                                cA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCC‑T‑‑‑‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggatac                 >  2:1165099‑M1/1‑56 (MQ=255)

                                                                                                                     ttttttGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCC‑T‑‑‑‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctg             <  1:6774400‑M1/140‑89 (MQ=255)

                                                                                                                       ttttGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCC‑T‑‑‑‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcc           <  1:279302‑M1/140‑91 (MQ=255)

                                                                                                                       ttttGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCC‑T‑‑‑‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcc           <  1:8200308‑M1/140‑91 (MQ=255)

                                                                                                                        tttGTCTGCCGTTTACCGCTACTGCGTCACGCGTATCATTTTCCC‑T‑‑‑‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgcgccactgctcaccgaaaccgtattccctgccc          <  2:7030953‑M1/140‑92 (MQ=255)

                                                                                                                          tGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCC‑T‑‑‑‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccga        <  2:5704490‑M1/140‑94 (MQ=255)

                                                                                                                          tGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCC‑T‑‑‑‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccga        <  2:8836658‑M1/140‑94 (MQ=255)

                                                                                                                          tGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCC‑G‑‑‑‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccga        <  2:7727916‑M1/140‑94 (MQ=255)

                                                                                                                             cTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCC‑T‑‑‑‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacga     >  1:7424690‑M1/1‑44 (MQ=255)

                                                                                                                             cTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCC‑T‑‑‑‑TGCtctggttcaccattctgcgctgactctacagaaggcgcattgctggctgcgtgagttgctccactgctcaccgaaaccggataccctgcccgacga     >  2:1620881‑M1/1‑44 (MQ=255)

                                                                                                                                ccGTTTACCGCTACTGCGTCACGCGTAACATATTCCC‑T‑‑‑‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgatac  <  1:4004059‑M1/140‑100 (MQ=255)

                                                                                                                                ccGTTTACCGCTACTGCGTCACGCGTAACATATTCCC‑T‑‑‑‑TGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgatac  <  1:10649690‑M1/140‑100 (MQ=255)

TTCAGGCTGCTAAAGATGACGCAGCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGTTACTGCGTCACGCGTAACATATTCCC‑T‑‑‑‑TGCTTCACCATTCTGCGCTGACTCTACTGAAGGCGCATTGCTGGCTGCGGGAGTTGCTCCACTGCTCACCGAAACCGGATACCCTGCCCGACGATACAACGC  >  NZ_CP025268/1762403‑1762669

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`