| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 2,862,725 | A→G | *219* (TAA→TAG) | pphB → | protein‑serine/threonine phosphatase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 2,862,725 | 0 | A | G | 99.8% | 1810.4 / ‑6.3 | 522 | *219* (TAA→TAG) | pphB | protein‑serine/threonine phosphatase |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (200/320); minor base T (0/1); total (200/322) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 | |||||||||||
Only 100 of 525 total aligned reads displayed.
TACAACAAATAAACGGCGCTGATTATTTTATATTTGGACATATGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAATCTCATGC‑T‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTCACCAGCGCGCGACTGGCACTCTCCGGCAAACCGTCGTCTGTAATAA > NZ_CP025268/2862589‑2862860 | tACAACACATAAACGGCGCTGATTATTTTATATTTGGACATATGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATANAATAAAGTAGtct < 1:9825028/140‑1 (MQ=255)tACAACAAATAAACGGCGCTGATTATTTTATATTTGGACATATGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGtct < 2:3261981/140‑1 (MQ=255) caacaaATAAACGGCGCTGATTATTTTATATTTGGACATATGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCa > 2:3698788/1‑140 (MQ=255) acaaATAAACGGCGCTGATTATTTTATATTTGGACATATGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATg > 1:4629522/1‑140 (MQ=255) caaATAAACGGCTCTGATTATTTTATATTTGGACATATGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATGc < 2:7865743/140‑1 (MQ=255) caaATAAACGGCGCTGATTATTTTATATTTGGACATATGATGTTTGATAACCTTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATGc < 1:1601906/140‑1 (MQ=255) aaTAAACGGCGCTGAATATTTTATATTTGGACATATGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATGc‑tt < 1:6717700/140‑2 (MQ=255) aTAAACGGCGCTGATTATTTTATATTTGGACATATGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATGc‑ttc < 1:10348593/140‑3 (MQ=255) tAAACGGCGCTGATTATTTTATATTTGGACATATGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATGc‑ttct < 2:10888727/140‑4 (MQ=255) tAAACGGCGCTGATTATTTTATATTTGGACATATGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATGc‑ttct < 1:428214/140‑4 (MQ=255) aaCGGCGCTGATTATTTTATATTTGGACATATGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATGc‑ttcttc < 2:917135/140‑6 (MQ=255) gcgcTGATTATTTTATATTTGGACATATGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATGCTT‑CTTCtgtg < 2:412572/140‑1 (MQ=255) cgcTGATTATTTTATATTTGGACATATGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATGCTT‑CTTCTGTGa > 2:2362620/1‑140 (MQ=255) cgcTGATAATTTTATATTTGGAAATATGATGTTTGATAACATTCAGACGTTCGCTACACAGATTTATATTGATAAAGGATCGCCGAACAGCTGGAGGCTGTCATATTATAATATAAAGTAGTCTCTTGCTT‑CTTCTGTGa > 2:10132604/1‑140 (MQ=255) cTGATTATTTTATATTTGGACATATGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCCTTTTATAAAATAAAGTAGTCTCATGCTT‑CTTCTGTGAAg > 1:8251962/1‑140 (MQ=255) cTGATTATTTTATATTTGGACATATGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATGCTT‑CTTCTGTGAAg < 1:1670773/140‑1 (MQ=255) tGATTATTTTATATTTGGACATATGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCTGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATGC‑TCCTTCTGTGAAGc < 2:5016229/140‑1 (MQ=255) tGATTATTTTATATTTGGACATATGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATGCTT‑CTTCTGTGAAGc < 1:2267169/140‑1 (MQ=255) tGATTATTTTATATTTGGACATATGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATGCTT‑CTTCTGTGAAGc < 2:4519744/140‑1 (MQ=255) tGATTATTTTATATTTGGACATATGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATGCTT‑CTTCTGTGAAGc < 1:5459912/140‑1 (MQ=255) tGATTATTTTATATTTGGACATATGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATGCTT‑CTTCTGTGAAGc < 1:5857667/140‑1 (MQ=255) attattTTATATTTGGACTTATGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATGCTT‑CTTCTGTGAAGCAt < 1:10535007/140‑1 (MQ=255) atatagggACATCTGCGGTTTGATAACATTCAGACGGTCGCTACCCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATGCTT‑CTTCTGTGAAGCATGAGTAAcc < 1:11111802/134‑1 (MQ=255) atatTTGGACATATGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATGCTT‑CTTCTGTGAAGCATGAGTAAcc < 2:6401828/140‑1 (MQ=255) atatTTGGACATATGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATGCTT‑CTTCTGTGAAGCATGAGTAAcc < 2:4297505/140‑1 (MQ=255) atatTTGGACATATGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATGCTT‑CTTCTGTGAAGCATGAGTAAcc < 1:1093928/140‑1 (MQ=255) atatTTGGACATATGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATGCTT‑CTTCTGTGAAGCATGAGTAAcc < 2:7655169/140‑1 (MQ=255) atatTTGGACATATGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATGCTT‑CTTCTGTGAAGCATGAGTAAcc < 1:11262473/140‑1 (MQ=255) atatTTGGACATATGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATGCTT‑CTTCTGTGAAGCATGAGTAAcc < 1:2756464/140‑1 (MQ=255) tatTTGGACATATGATGATTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATGCTT‑CTTCTGTGAAGCATGAGTAAccc < 1:8620297/140‑1 (MQ=255) atTTGGACATATGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATGCTT‑CTTCTGTGAAGCATGAGTAACCCg > 2:4968306/1‑140 (MQ=255) tttGGACATATGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATGCTT‑CTTCTGTGAAGCATGAGTAACCCgg < 2:1897994/140‑1 (MQ=255) tcgACATATGATTTTTGATAACAATCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTATATAAAATAAAGTCGTCACATGCTT‑CTTCTGTGAAGCATGCGTAACCCGgtg < 2:3132816/138‑1 (MQ=255) ggACATATGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATGCTT‑CTTCTGTGAAGCATGAGTAACCCGgtgt > 2:4002882/1‑140 (MQ=255) ggACATATGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATGCTT‑CTTCTGTGAAGCATGAGTAACCCGgtgt < 1:185593/140‑1 (MQ=255) tgatgTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATGCTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCa < 1:410384/140‑1 (MQ=255) tttGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATGCTT‑CTTCtg > 2:11236801/1‑106 (MQ=255) ttGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATGCTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCat < 1:69900/140‑1 (MQ=255) tGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATGCTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCatt < 1:10781125/140‑1 (MQ=255) gATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATGCTT‑CTTCTGTGAAGc > 1:4960456/1‑109 (MQ=255) aTAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATGCTT‑CTTCTGTGAAGc > 1:316361/1‑108 (MQ=255) aTAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATGCTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCattat > 1:5500434/1‑140 (MQ=255) tAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATGCTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCattatt < 2:717273/140‑1 (MQ=255) cATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATGCTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCAt > 2:8798531/1‑140 (MQ=255) ctgACGTTCGCTAACCAGATTTATTTTGCTCACGGATCGCCGAACAGCGGGCGGCTGTCTTTTTATAAAATACCGTATTCTCATGCTT‑CTTCTGTGAAGCTTGAGTAACACGTTGTTATTGCAGGCCATTTTTCAtggcc < 1:2560015/138‑5 (MQ=255) aGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATGCTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTc > 2:815965/1‑140 (MQ=255) gTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATGCTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTa < 2:8600309/140‑1 (MQ=255) gTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATGCTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTa < 2:2857971/140‑1 (MQ=255) gTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATGCTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTa < 1:5058459/140‑1 (MQ=255) ttCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATGCTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTAc > 2:8465594/1‑140 (MQ=255) ttCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATGCTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTAc > 2:3303340/1‑140 (MQ=255) ttCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATGCTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTAc > 2:3412780/1‑140 (MQ=255) ttCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATGCTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTAc > 2:1113620/1‑140 (MQ=255) ttCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATGCTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTAc > 2:5848162/1‑140 (MQ=255) ttCGCTAACCAGAGTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCGCATGCGT‑GTTCTGTGAAGAATGAGTAACCCGGTGTTAGTTCAGGCCAGTATTCATTTTGAGCTAc > 2:164906/1‑140 (MQ=255) tCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATGCTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTAcc > 1:7747835/1‑140 (MQ=255) tCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATGCTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTAcc < 2:1191315/140‑1 (MQ=255) tCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATGCTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTAcc > 2:2565862/1‑140 (MQ=255) cGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATGCTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCa > 2:10760035/1‑140 (MQ=255) gCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATGCTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAg < 2:2015686/140‑1 (MQ=255) tAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATGCTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCa < 1:5956346/140‑1 (MQ=255) tAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATGCTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCa < 1:3522444/140‑1 (MQ=255) tAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATGCTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCa < 1:1767925/140‑1 (MQ=255) gATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATGCTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAagaga > 2:472636/1‑140 (MQ=255) gATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATGCTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAagaga > 2:2964890/1‑140 (MQ=255) aTTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATGCTT‑CTTCTGTGAAGCATGAGTAAccc < 1:1238614/93‑1 (MQ=255) aTTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATGCTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAagagag > 2:5605278/1‑140 (MQ=255) aTTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATGCTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAagagag > 2:749127/1‑140 (MQ=255) ttATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATGCTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGAt < 2:1375512/140‑1 (MQ=255) ttATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATGCTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGAt < 1:994602/140‑1 (MQ=255) gtataTTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATGCTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGAt < 2:8994976/139‑1 (MQ=255) atatTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATGCTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATcc < 1:214751/140‑1 (MQ=255) atatTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATGCTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATcc < 1:6301556/140‑1 (MQ=255) aTACCGGATTGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATGCTT‑CTTCtgt < 2:9496821/67‑1 (MQ=255) aTACCGGATTGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATGCTT‑CTTCtgt > 1:9496822/1‑67 (MQ=255) aTACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATGCTT‑CTTCTGTGAAGCATGa > 2:5392356/1‑76 (MQ=255) aTACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATGCTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTc > 1:9070718/1‑140 (MQ=255) aTACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATGCTT‑CTTCTGTGAAGCATCAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCACAGAGAGATCCTGCTTc > 2:6123010/1‑140 (MQ=255) aCCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATGCTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTCAc < 1:7500706/140‑1 (MQ=255) gATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATGCTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTCACCAgc > 2:6532293/1‑140 (MQ=255) gATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATGCTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCAGTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTCACCAgc > 2:6745127/1‑140 (MQ=255) aTCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATGCTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTCACCAgcg < 1:8470007/140‑1 (MQ=255) tCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATGCTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTCACCAgcgc < 1:7885142/140‑1 (MQ=255) cGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATGCTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTCACCAGCGCGCGa < 1:4823349/140‑1 (MQ=255) gAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATGCTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTCACCAGCGCGCGAc < 2:1028150/140‑1 (MQ=255) cAGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATGCTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTCACCAGCGCGCGACTgg < 2:10515728/140‑1 (MQ=255) aGCGGGCGGCTGTCATTTTATAAAATAAAGTAGTCTCATGCTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTCACCAGCGCGCGACTGGc > 2:3560985/1‑140 (MQ=255) gcgggcggCTGTCATTTTATAAAATAAAGTAGTCTCATGCTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCTCTACCAGCAAAGAGAGATCCTGCTTCACCAGCGCGCGACTGTCa < 2:10003175/140‑1 (MQ=255) gcgggcggCTGTCATTTTATAAAATAAAGTAGTCTCATGCTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTCACCAGCGCGCGACTGGCa < 2:2672017/140‑1 (MQ=255) gcgggcggCTGTCATTTTATAAAATAAAGTAGTCTCATGCTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTCACCAGCGCGCGACTGGCa < 1:8771756/140‑1 (MQ=255) cgggcggCTGTCATTTTATAAAATAAAGTAGTCTCATGCTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTCACCAGCGCGCGACTGGCAc > 2:5224211/1‑140 (MQ=255) gggcggCTGTCATTTTATAAAATAAAGTAGTCTCATGCTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTCACTAGCGCGCGACTGGCAct < 1:10148647/140‑1 (MQ=255) cTGTCATTTTATAAAATAAAGTAGTCTCATGCTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGc > 1:9359662/1‑89 (MQ=255) cTGTCATTTTATAAAATAAAGTAGTCTCATGCTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGc < 2:9359678/89‑1 (MQ=255) cTGTCATTTTATAAAATAAAGTAGTCTCATGCTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTCACCAGCGCGCGACTGGCACTCTCCgg > 1:969041/1‑140 (MQ=255) ataaaataaaGTAGTCTCATGCTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTCACCAGCGCGCGACTGGCACTCTCCGGCAAACcgtcg > 1:6524913/1‑140 (MQ=255) ataaaataaaGTAGTCTCATGCTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTCACCAGCGCGCGACTGGCACTCTCCGGCAAACcgtcg > 2:3881757/1‑140 (MQ=255) ataaaataaaGTAGTCTCATGC‑TGCTACTGTGAAGCATGAGTAACCCGGTGTTAGTGCAGGCCAGTCTTCATTATACGCTACCAGCACAGAGAGATCCTGCTTCTCACGCGCTCGACTGGACCTCGCCGGCACCCcgtgg > 2:9096931/1‑138 (MQ=255) agtagtCTCATGCTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTCACCAGCGCGCGACTGGCACTCTCCGGCAAACCGTCGTCTGtaata > 1:3772312/1‑140 (MQ=255) agtagtCTCATGCTT‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTCACCAGCGCGCGACTGGCACTCTCCGGCAAACCGTCGTCTGtaata > 1:2978857/1‑140 (MQ=255) | TACAACAAATAAACGGCGCTGATTATTTTATATTTGGACATATGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAATCTCATGC‑T‑CTTCTGTGAAGCATGAGTAACCCGGTGTTATTGCAGGCCATTATTCATTTTTCGCTACCAGCAAAGAGAGATCCTGCTTCACCAGCGCGCGACTGGCACTCTCCGGCAAACCGTCGTCTGTAATAA > NZ_CP025268/2862589‑2862860 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |