Predicted mutation
evidence seq id position mutation annotation gene description
RA NZ_CP025268 2,907,837 C→T intergenic (‑114/‑25) queE ← / → CXP41_RS15220 7‑carboxy‑7‑deazaguanine synthase QueE/cell envelope stress response protein YqcG

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NZ_CP0252682,907,8370CT99.7% 1364.2 / NA 358intergenic (‑114/‑25)queE/CXP41_RS152207‑carboxy‑7‑deazaguanine synthase QueE/cell envelope stress response protein YqcG
Reads supporting (aligned to +/- strand):  ref base C (0/0);  major base T (108/249);  minor base G (0/1);  total (108/250)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 377 total aligned reads displayed.

CATCTCGTTAATCGGGTACTGCATAGCATTCTCTGTGAAGTGGATAATTGTTAATTATTGCAGATCCTGCCACAACAATCATGTCTTATTAACATTCTGTTACAGGCAGGTTTAAAGAAAAATGCGAAACATATCGTCAATAATTAAAGGGAGTAACGTATTATGTCAGAAGAAAATAAAGAAAATGGATTTAATCATGTCAAAACATTCACCAAAATTATATTTATTTTTTCTGTATTAGTTTTTAATGATAACGAATATAAAATTACCGATG  >  NZ_CP025268/2907700‑2907973
                                                                                                                                         |                                                                                                                                        
cATCTCGTTAATCGGGTACTGCATAGCATTCTCTGTGAAGTGGATAATTGTTAATTATTGCAGATCCTGCCACAACAATCATGTCTTATTAACATTCTGTTACAGGCAGGTTTAAAGAAAAATGCGAAACATATCGTTaa                                                                                                                                        <  1:5067010/140‑1 (MQ=255)
cATCTCGTTAATCGGGTACTGCATAGCATTCTCTGTGAAGTGGATAATTGTTAATTATTGCAGATCCTGCCACAACAATCATGTCTGATTAACATTCTGTTACAGGCAGGTTTAAAGAAAAATGCGAAACATATCGTTaa                                                                                                                                        <  2:8560852/140‑1 (MQ=255)
   ctcGTTAATCGGGTACTGCATAGCATTCTCTGTGAAGTGGATAATTGTTAATTATTGCAGATCCTGCCACAACAATCATGTCTTATTAACATTCTGTTACAGGCAGGTTTAAAGAAAAATGCGAAACATATCGTtaataa                                                                                                                                     <  1:10085542/140‑1 (MQ=255)
   ctcGTTAATCGGGTACTGCATAGCATTCTCTGTGAAGTGGATAATTGTTAATTATTGCAGATCCTGCCACAACAATCATGTCTTATTAACATTCTGTTACAGGCAGGTTTAAAGAAAAATGCGAAACATATCGTtaataa                                                                                                                                     >  1:6286081/1‑140 (MQ=255)
   ctcGTTAATCGGGTACTGCATAGCATTCTCTGTGAAGTGGATAATTGTTAATTATTGCAGATCCTGCCACAACAATCATGTCTTATTAACATTCTGTTACAGGCAGGTTTAAAGAAAAATGCGAAACATATCGTtaataa                                                                                                                                     >  1:9550226/1‑140 (MQ=255)
   ctcGTTAATCGGGTACTGCATAGCATTCTCTGTGAAGTGGATAATTGTTAATTATTGCAGATCCTGCCACAACAATCATGTCTTATTAACATTCTGTTACAGGCAGGTTTAAAGAAAAATGCGAAACATATCGTtaataa                                                                                                                                     >  1:4571705/1‑140 (MQ=255)
   ctcGTTAATCGGGTACTGCATAGCATTCTCTGTGAAGTGGATAATTGTTAATTATTGCAGATCCTGCCACAACAATCATGTCTTATTAACATTCTGTTACAGGCAGGTTTAAAGAAAAATGCGAAACATATCGTtaataa                                                                                                                                     <  1:3422166/140‑1 (MQ=255)
   ctcGTTAATCGGGTACTGCATAGCATTCTCTGTGAAGTGGATAATTGTTAATTATTGCAGATCCTGCCACAACAATCATGTCTTATTAACATTCTGTTACAGGCAGGTTTAAAGAAAAATGCGAAACATATCGTtaataa                                                                                                                                     >  1:1898566/1‑140 (MQ=255)
       ttAATCGGGTACTGCATAGCATTCTCTGTGAAGTGGATAATTGTTAATTATTGCAGATCCTGCCACAACAATCATGTCTTATTAACATTCTGTTACAGGCAGGTTTAAAGAAAAATGCGAAACATATCGTTAATAATTaa                                                                                                                                 >  1:9435217/1‑140 (MQ=255)
        tAATCGGGTACTGCATAGCATTCTCTGTGAAGTGGATAATTGTTAATTATTGCAGATCCTGCCACAACAATCATGTCTTATTAACATTCTGTTACAGGCAGGTTTAAAGAAAAATGCGAAACATATCGTTAATAATTaaa                                                                                                                                <  2:3770264/140‑1 (MQ=255)
        tAATCGGGTACTGCATAGCATTCTCTGTGAAGTGGATAATTGTTAATTATTGCAGATCCTGCCACAACAATCATGTCTTATTAACATTCTGTTACAGGCAGGTTTAAAGAAAAATGCGAAACATATCGTTAATAATTaaa                                                                                                                                <  1:572111/140‑1 (MQ=255)
        tAATCGGGTACTGCATAGCATTCTCTGTGAAGTGGATAATTGTTAATTATTGCAGATCCTGCCACAACAATCATGTCTTATTAACATTCTGTTACAGGCAGGTTTAAAGAAAAATGCGAAACATATCGTTAATAATTaaa                                                                                                                                <  2:4341946/140‑1 (MQ=255)
        tAATCGGGTACTGCATAGCATTCTCTGTGAAGTGGATAATTGTTAATTATTGCAGATCCTGCCACAACAATCATGTCTTATTAACATTCTGTTACAGGCAGGTTTAAAGAAAAATGCGAAACATATCGTTAATAATTaaa                                                                                                                                <  2:4556166/140‑1 (MQ=255)
        tAAGCGGGTCCTGCATCGCATTCTCAGTGAAGTGGAGAATTGTTCATGATGGCAGCTCCTGCCCCAACACACCTGTCTTATTAACATTCTGTGACAGGCAGGTTTAAAGAAAACAGCGAAACATATCGTTAATAATTaaa                                                                                                                                <  2:10129429/140‑1 (MQ=255)
          aTCTGGTACTGCATAGCATTCTCTGTTAAGTGTATAATTGTTAATTATTTCAGATCCTGCCACAAAAATCATCTCTTATTAACATTCTGTTAAAGGAAGGTTTAAACAAAAATCCGAAACATATCGTTAATAATTAAAgg                                                                                                                              <  2:679644/140‑1 (MQ=255)
          aTCGGGTACTGCATAGCATTCTCTGTGAAGTGGATAATTGTTAATTATTGCAGATCCTGCCACAACAATCATGTCTTATTAACATTCTGTTACAGGCATGTTTAAAGAAAAATGCGAAACATATCGTTAATAATTAAAgg                                                                                                                              <  1:6074611/140‑1 (MQ=255)
          aTCGGGTACTGCATAGCATTCTCTGTGAAGTGGATAATTGTTAATTATTGCAGATCCTGCCACAACAATCATGTCTTATTAACATTCTGTTACAGGCAGGTTTAAAGAAAAATGCGAAACATATCGTTAATAATTAAAgg                                                                                                                              <  2:5547792/140‑1 (MQ=255)
          aTCGGGTACTGCATAGCATTCTCTGTGAAGTGGATAATTGTTAATTATTGCAGATCCTGCCACAACAATCATGTCTTATTAACATTCTGTTACAGGCAGGTTTAAAGAAAAATGCGAAACATATCGTTAATAATTAAAgg                                                                                                                              <  1:2735256/140‑1 (MQ=255)
          aTCGGGTACTGCATAGCATTCTCTGTGAAGTGGATAATTGTTAATTATTGCAGATCCTGCCACAACAATCATGTCTTATTAACATTCTGTTACAGGCAGGTTTAAAGAAAAATGCGAAACATATCGTTAATAATTAAAgg                                                                                                                              <  2:4099597/140‑1 (MQ=255)
          aTCGGGTACTGCATAGCATTCTCTGTGAAGTGGATAATTGTTAATTATTGCAGATCCTGCCACAACAATCATGTCTTATTAACATTCTGTTACAGGCAGGTTTAAAGAAAAATGCGAAACATATCGTTAATAATTAAAgg                                                                                                                              <  1:7572046/140‑1 (MQ=255)
          aTCGGGTACTGCATAGCATTCTCTGTGAAGTGGATAATTGTTAATTATTGCAGATCCTGCCACAACAATCATGTCTTATTAACATTCTGTTACAGGCAGGTTTAAAGAAAAATGCGAAACATATCGTTAATAATTAAAgg                                                                                                                              <  2:8713181/140‑1 (MQ=255)
           tCGGGTACTGCATAGCATTCTCTGTGAAGTGGATAATTGTTAATTATTGCAGATCCTGCCACAACAATCATGTCTTATTAACATTCTGTTACAGGCAGGTTTAAAGAAAAATGCGAAACATATCGTTAATAATTAAAggg                                                                                                                             >  2:3629176/1‑140 (MQ=255)
            cgtgTACTGCATAGCATTCTCGGTGAAGTGGCTAATTGATAAATATTGCAGATCCTGCCACAACAATCATGTCTTATTCACATTCTGTTACAGGCAGGTTTTAAGAAAAATGCGAAACATATCGTTAATAATTAAAGGGa                                                                                                                            <  2:6487213/137‑1 (MQ=255)
            cGGGTACTGCATAGCATTCTCTGTGAAGTGGATAATTGTTAATTATTGCAGATCCTGCCACAACAATCATGTCTTATTAACATTCTGTTACAGGCAGGTTTAAAGAAAAATGCGAAACATATCGTTAATAATTAAAgg                                                                                                                              >  2:10634219/1‑138 (MQ=255)
            cGGGTACTGCATAGCATTCTCTGTGAAGTGGATAATTGTTAATTATTGCAGATCCTGCCACAACAATCATGTCTTATTAACATTCTGTTACAGGCAGGTTTAAAGAAAAATGCGAAACATATCGTTAATAATTAAAgg                                                                                                                              <  1:9923513/138‑1 (MQ=255)
            cGGGTACTGCATAGCATTCTCTGTGAAGTGGATAATTGTTAATTATTGCAGATCCTGCCACAACAATCATGTCTTATTAACATTCTGTTACAGGCAGGTTTAAAGAAAAATGCGAAACATATCGTTAATAATTAAAgg                                                                                                                              >  2:8802183/1‑138 (MQ=255)
            cGGGTACTGCATAGCATTCTCTGTGAAGTGGATAATTGTTAATTATTGCAGATCCTGCCACAACAATCATGTCTTATTAACATTCTGTTACAGGCAGGTTTAAAGAAAAATGCGAAACATATCGTTAATAATTAAAGGGa                                                                                                                            <  2:6286080/140‑1 (MQ=255)
            cGGGTACTGCATAGCATTCTCTGTGAAGTGGATAATTGTTAATTATTGCAGATCCTGCCACAACAATCATGTCTTATTAACATTCTGTTACAGGCAGGTTTAAAGAAAAATGCGAAACATATCGTTAATAATTAAAGGGa                                                                                                                            <  1:10479754/140‑1 (MQ=255)
             gggTACTGCATAGCATTCTCTGTGAAGTGGATAATTGTTAATTATTGCAGATCCTGCCACAACAATCATGTCTTATTAACATTCTGTTACAGGCAGGTTTAAAGAAAAATGCGAAACATATCGTTAATAATTaaa                                                                                                                                >  2:5924291/1‑135 (MQ=255)
              ggTACTGCATAGCATTCTCTGTGAAGTGGATAATTGTTAATTATTGCAGATCCTGCCACAACAATCATGTCTTATTAACATTCTGTTACAGGCAGGTTTAAAGAAAAATGCGAAACATATCGTTAATAATTAAAGGGAGt                                                                                                                          <  1:5487355/140‑1 (MQ=255)
              ggTACTGCATAGCATTCTCTGTGAAGTGGATAATTGTTAATTATTGCAGATCCTGCCACAACAATCATGTCTTATTAACATTCTGTTACAGGCAGGTTTAAAGAAAAATGCGAAACATATCGTTAATAATTAAAGGGAGt                                                                                                                          <  2:2003960/140‑1 (MQ=255)
              ggTACTGCATAGCATTCTCTGTGAAGTGGATAATTGTTAATTATTGCAGATCCTGCCACAACAATCATGTCTTATTAACATTCTGTTACAGGCAGGTTTAAAGAAAAATGCGAAACATATCGTTAATAATTAAAGGGAGt                                                                                                                          <  1:6738746/140‑1 (MQ=255)
              cctACTGCATATCATTCTCTTTGAACAGGATACTTGTTAATTATTGCAGATCCTTCCACAACAAAAATCACTTATTAACATTCTGTAAAACGCAGGTTTAAACAAAAAACCCAAACATATCGTTAATAAATAAAGGGact                                                                                                                          <  2:9569762/138‑3 (MQ=255)
               gTACTGCATAGCATTCTCTGTGAAGTGTATAATTGTTAATTATTGCAGATCCTGCCACAACAATCATGTCTTATTAACATTCTGTTACAGGCAGGTTTAAAGAAAAATGCGAAACATATCGTTAATAATTAAAGGGAGTa                                                                                                                         <  2:4149256/140‑1 (MQ=255)
               gTACTGCATAGCATTCTCTGTGAAGTGGATAATTGTTAATTATTGCAGATCCTGCCACAACAATCATGTCTTATTAACATTCTGTTACAGGCAGGTTTAAAGAAAAATGCGAAACATATCGTTAATAATTAAAgg                                                                                                                              >  1:1239830/1‑135 (MQ=255)
               gTACTGCATAGCATTCTCTGTGAAGTGGATAATTGTTAATTATTGCAGATCCTGCCACAACAATCATGTCTTATTAACATTCTGTTACAGGCAGGTTTAAAGAAAAATGCGAAACATATCGTTAATAATTAAAGGGAGTa                                                                                                                         <  1:7247513/140‑1 (MQ=255)
               gTACTGCATAGCATTCTCTGTGAAGTGGATAATTGTTAATTATTGCAGATCCTGCCACAACAATCATGTCTTATTAACATTCTGTTACAGGCAGGTTTAAAGAAAAATGCGAAACATATCGTTAATAATTAAAGGGAGTa                                                                                                                         <  2:239973/140‑1 (MQ=255)
               gTACTGCATAGCATTCTCTGTGAAGTGGATAATTGTTAATTATTGCAGATCCTGCCACAACAATCATGTCTTATTAACATTCTGTTACAGGCAGGTTTAAAGAAAAATGCGAAACATATCGTTAATAATTAAAGGGAGTa                                                                                                                         <  2:4881945/140‑1 (MQ=255)
               gTACTGCATAGCATTCTCTGTGAAGTGGATAATTGTTAATTATTGCAGATCCTGCCACAACAATCATGTCTTATTAACATTCTGTTACAGGCAGGTTTAAAGAAAAATGCGAAACATATCGTTAATAATTAAAGGGAGTa                                                                                                                         <  1:9266177/140‑1 (MQ=255)
                tACTGCATAGCATTCTCTGTGAAGTGGATAATTGTTAATTATTGCAGATCCTGCCACAACAATCATGTCTTATTAACATTCTGTTACAGGCAGGTTTAAAGAAAAATGCGAAACATATCGTTAATAATTaa                                                                                                                                 >  2:6959151/1‑131 (MQ=255)
                tACTGCATAGCATTCTCTGTGAAGTGGATAATTGTTAATTATTGCAGATCCTGCCACAACAATCATGTCTTATTAACATTCTGTTACAGGCAGGTTTAAAGAAAAATGCGAAACATATCGTTAATAATTaa                                                                                                                                 <  1:6959152/131‑1 (MQ=255)
                tACTGCATAGCATTCTCTGTGAAGTGGATAATTGTTAATTATTGCAGATCCTGCCACAACAATCATGTCTTATTAACATTCTGTTACAGGCAGGTTTAAAGAAAAATGCGAAACATATCGTTAATAATTAAAGGGAGTaa                                                                                                                        <  1:8136641/140‑1 (MQ=255)
                tACTGCATAGCATTCTCTGTGAAGTGGATAATTGTTAATTATTGCAGATCCTGCCACAACAATCATGTCTTATTAACATTCTGTTACAGGCAGGTTTAAAGAAAAATGCGAAACATATCGTTAATAATTAAAGGGAGTaa                                                                                                                        <  1:3629177/140‑1 (MQ=255)
                tACTGCATAGCATTCTCTGTGAAGTGGATAATTGTTAATTATTGCAGATCCTGCCACAACAATCATGTCTTATTAACATTCTGTTACAGGCAGGTTTAAAGAAAAATGCGAAACATATCGTTAATAATTAAAGGGAGTaa                                                                                                                        <  1:3175438/140‑1 (MQ=255)
                tACTGCATAGCATTCTCTGTGAAGTGGATAATTGTTAATTATTGCAGATCCTGCCACAACAATCATGTCTTATTAACATTCTGTTACAGGCAGGTTTAAAGAAAAATGCGAAACATATCGTTAATAATTAAAGGGAGTaa                                                                                                                        <  1:5971278/140‑1 (MQ=255)
                tACTGCATAGCATTCTCTGTGAAGTGGATAATTGTTAATTATTGCAGATCCTGCCACAACAATCATGTCTTATTAACATTCTGTTACAGGCAGGTTTAAAGAAAAATGCGAAACATATCGTTAATAATTAAAGGGAGTaa                                                                                                                        <  2:5442967/140‑1 (MQ=255)
                    gCATAGCATTCTCTGTGAAGTGGATAATTGTTAATTATTGCAGATCCTGCCACAACAATCATGTCTTATTAACATTCTGTTACAGGCAGGTTTAAAGAAAAATGCGAAACATATCGTTAATAATTAAATGGAGTAACGta                                                                                                                    >  2:2796757/1‑140 (MQ=255)
                     cATAGCATTCTCTGTGAAGTGGATAATTGTTAATTATTGCAGATCCTGCCACAACAATCATGTCTTATTAACATTCTGTTACAGGCAGGTTTAAAGAAAAATGCGAAACATATCGTTAATAATTAAAGGGAGTaa                                                                                                                        >  2:3078947/1‑135 (MQ=255)
                     cATAGCAATCTCTGTGAAGTGGATAATTGATAATTATTGCAGATCCTGCCACAACAATCATGTCTTATTAACATTCTGTTACAGGCAGGTTTAAAGAAAAATGCGAAACATATCGTTAATAATTAAAGGGAGTAACGtat                                                                                                                   <  1:10379597/140‑1 (MQ=255)
                      aTAGCATTCTCTGTGAAGTGGATAATTGTTAATTATTGCAGATCCTGCCACAACAATCATGTCTTATTAACATTCTGTTACAGGCAGGTTTAAAGAAAAATGCGAAACATATCGTTAATAATTAAAGGGAGTAACGtatt                                                                                                                  <  1:640884/140‑1 (MQ=255)
                        aGCATTCTCTGTGAAGTGGATAATTGTTAATTATTGCAGATCCTGCCACAACAATCATGTCTTATTAACATTCTGTTACAGGCAGGTTTAAAGAAAAATGCGAAACATATCGTTAATAATTaa                                                                                                                                 >  2:157495/1‑123 (MQ=255)
                         gCATTCTCTGTGAAGTGGATAATTGTTAATTATTGCAGATCCTGCCACAACAATCATGTCTTATTAACATTCTGTTACAGGCAGGTTTAAAGAAAAATGCGAAACATATCGTTaa                                                                                                                                        >  1:5915196/1‑115 (MQ=255)
                         gCATTCTCTGTGAAGTGGATAATTGTTAATTATTGCAGATCCTGCCACAACAATCATGTCTTATTAACATTCTGTTACAGGCAGGTTTAAAGAAAAATGCGAAACATATCGTTAATAATTAAAGGGAGTCACGTATTATg                                                                                                               >  2:3517037/1‑140 (MQ=255)
                         gCATTCTCTGTGAAGTGGATAATTGTTAATTATTGCAGATCCTGCCACAACAATCATGTCTTATTAACATTCTGTTACAGGCAGGTTTAAAGAAAAATGCGAAACATATCGTTAATAATTAAAGGGAGTAACGTATTATg                                                                                                               >  1:2077430/1‑140 (MQ=255)
                          cATTCTCTGTGAAGTGGATTATTGTTAATTATTGCAGATCCTTCCACAACAATCATGTCTTATTAACATTCTGTTACAGGCAGGTTTAAAGAAAAATGCGAAACATATCGTTAATAATTAAAGTGAGTAACGTATTATGt                                                                                                              <  2:5127807/140‑1 (MQ=255)
                          cATTCTCTGTGAAGTGGATAATTGTTAATTATTGCAGATCCTGCCACAACAATCATGTCTTATTAACATTCTGTTACAGGCAGGTTTAAAGAAAAATGCGAAACATATCGTTAATAAtt                                                                                                                                   <  1:7762535/119‑1 (MQ=255)
                          cATTCTCTGTGAAGTGGATAATTGTTAATTATTGCAGATCCTGCCACAACAATCATGTCTTATTAACATTCTGTTACAGGCAGGTTTAAAGAAAAATGCGAAACATATCGTTAATAATTaa                                                                                                                                 >  1:2629337/1‑121 (MQ=255)
                          cATTCTCTGTGAAGTGGATAATTGTTAATTATTGCAGATCCTGCCACAACAATCATGTCTTATTAACATTCTGTTACAGGCAGGTTTAAAGAAAAATGCGAAACATATCGTTAATAATTAAAGGGAGTAACGTATTATGt                                                                                                              <  2:9435216/140‑1 (MQ=255)
                             tctcTGTGAAGTGGATAATTGTTAATTATTGCAGATCCTGCCACAACAATCATGTCTTATTAACATTCTGTTACAGGCAGGTTTAAAGAAAAATGCGAAACATATCGTTAATAATTaa                                                                                                                                 >  2:2252470/1‑118 (MQ=255)
                             tctcTGTGAAGTGGATAATTGTTAATTATTGCAGATCCTGCCACAACAATCATGTCTTATTAACATTCTGTTACAGGCAGGTTTAAAGAAAAATGCGAAACATATCGTTAATAATTAAAGGGAGt                                                                                                                          >  2:2569160/1‑125 (MQ=255)
                             tctcTGTGAAGTGGATAATTGTTAATTATTGCAGATCCTGCCACAACAATCATGTCTTATTAACATTCTGTTACAGGCAGGTTTAAAGAAAAATGCGAAACATATCGTTAATAATTAAAGGGAGt                                                                                                                          <  1:2569161/125‑1 (MQ=255)
                               tctGTGAAGTGGATAATTGTTAATTATTGCAGATCCTGCCACAACAATCATGTCTTATTAACATTCTGTTACAGGCAGGTTTAAAGAAAAATGCGAAACATATCGTTAATAATTaa                                                                                                                                 >  2:7831295/1‑116 (MQ=255)
                               tctGTGAAGTGGATAATTGTTAATTATTGCAGATCCTGCCACAACAATCATGTCTTATTAACATTCTGTTACAGGCAGGTTTAAAGAAAAATGCGAAACATATCGTTAATAATTAAAgg                                                                                                                              <  1:8002851/119‑1 (MQ=255)
                               tctGTGAAGTGGATAATTGTTAATTATTGCAGATCCTGCCACAACAATCATGTCTTATTAACATTCTGTTACAGGCAGGTTTAAAGAAAAATGCGAAACATATCGTTAATAATTAAAGGGAGTa                                                                                                                         <  2:403970/124‑1 (MQ=255)
                               tctGTGAAGTGGATAATTGTTAATTATTGCAGATCCTGCCACAACAATCATGTCTTATTAACATTCTGTTACAGGCAGGTTTAAAGAAAAATGCGAAACATATCGTTAATAATTAAAGGGAGTa                                                                                                                         >  1:403970/1‑124 (MQ=255)
                                 tgtgAAGTGGATAATTGTTAATTATTGCAGATCCTGCCACAACAATCATGTCTTATTAACATTCTGTTACAGGCAGGTTTAAAGAAAAATGCGAAACATATCGTTaa                                                                                                                                        <  1:10806866/107‑1 (MQ=255)
                                 tgtgAAGTGGATAATTGTTAATTATTGCAGATCCTGCCACAACAATCATGTCTTATTAACATTCTGTTACAGGCAGGTTTAAAGAAAAATGCGAAACATATCGTTAATAATTAAAgg                                                                                                                              >  1:11048450/1‑117 (MQ=255)
                                   tgAAGTGGATAATTGTTAATTATTGCAGATCCTGCCACAACAATCATGTCTTATTAACATTCTGTTACAGGCAGGTTTAAAGAAAAATGCGAAACATATCGTTAATAATTAAAGGGAGTa                                                                                                                         >  2:215923/1‑120 (MQ=255)
                                   tgAAGTGGATAATTGTTAATTATTGCAGATCCTGCCACAACAATCATGTCTTATTAACATTCTGTTACAGGCAGGTTTAAAGAAAAATGCGAAACATATCGTTAATAATTAAAGGGAGTa                                                                                                                         <  1:215923/120‑1 (MQ=255)
                                    gAAGTGGATAATTGTTAATTATTGCAGATCCTGCCACAACAATCATGTCTTATTAACATTCTGTTACAGGCAGGTTTAAAGAAAAATGCGAAACATATCGTTAATAATTAAAGGGAGTAACGTATTATGTCAGAAGaaaa                                                                                                    >  2:9170518/1‑140 (MQ=255)
                                      aGTGGATAATTGTTAATTATTGCAGATCCTGCCACAACAATCATGTCTTATTAACATTCTGTTACAGGCAGGTTTAAAGAAAAATGCGAAACATATCGTTaa                                                                                                                                        <  1:2308678/102‑1 (MQ=255)
                                         ggATAATTGTTAATTATTGCAGATCCTGCCACAACAATCATGTCTTATTAACATTCTGTTACAGGCAGGTTTAAAGAAAAATGCGAAACATATCGTTAATAATTAAAGGGAGTAACGtat                                                                                                                   >  2:6024544/1‑120 (MQ=255)
                                           aTAATTGTTAATTATTGCAGATCCTGCCACAACAATCATGTCTTATTAACATTCTGTTACAGGCAGGTTTAAAGAAAAATGCGAAACATATCGTTAATAATTATAGGGAGTAACGTATTATGTCAGAAGAAAATAAAGaa                                                                                             >  1:6904316/1‑140 (MQ=255)
                                           aTAATTGTTAATTATTGCAGATCCTGCCACAACAATCATGTCTTATTAACATTCTGTTACAGGCAGGTTTAAAGAAAAATGCGAAACATATCGTTAATAATTAAAGGGAGTAACGtat                                                                                                                   >  1:5310207/1‑118 (MQ=255)
                                           aTAATTGTTAATTATTGCAGATCCTGCCACAACAATCATGTCTTATTAACATTCTGTTACAGGCAGGTTTAAAGAAAAATGCGAAACATATCGTTAATAATTAAAGGGAGTAACGTATTATGTCAGAAGAAAATAAAGaa                                                                                             >  2:4611972/1‑140 (MQ=255)
                                             aaTTGTTAATTATTGCAGATCCTGCCACAACAATCATGTCTTATTAACATTCTGTTACAGGCAGGTTTAAAGAAAAATGCGAAACATATCGTTAATAATTAAAGGGAGTAACGTATTATGTCAGAAGAAAATAAAGaaaa                                                                                           <  2:11423083/140‑1 (MQ=255)
                                             aaTTGTTAATGATTGCAGATCCTGCCACAACCATCATGTCTTATTAACATTCTGTTACAGGCAGGTTTAAAGAAAAATGCGAAACATATCGTTAATAATTAAAGGGAGTAACGTATTATGTCAGAAGAAAATAAAGaaaa                                                                                           <  1:9630329/140‑1 (MQ=255)
                                              aTTGTTAATTATTGCAGATCCTGCCACAACAATCATGTCTTATTAACATTCTGTTACAGGCAGGTTTAAAGAAAAATGCGAAACATATCGTTAATAATTAAAGGGAGTAACGTATTATGTCAGAAGAAAATAAAGAAAAt                                                                                          <  2:5353909/140‑1 (MQ=255)
                                               ttGTTAATTATTGCAGATCCTGCCACAACAATCATGTCTTATTAACATTCTGTTACAGGCAGGTTTAAAGAAAAATGCGAAACATATCGTTAATAATTAAAgg                                                                                                                              >  1:1574713/1‑103 (MQ=255)
                                                       tataGCAGACCCTGCCACAACACTCATGTCTTATGAACATTCTGTTACAGGCAGGTTTAAAGAAAAATGCGAAACATATCGTTAATAATTAAAGGGAGTAACGTATTATGTCAGAAGAAAATGAAGAAAATGGATTTAAt                                                                                 <  1:8554329/140‑1 (MQ=255)
                                                         ttGCAGAACCTGCCACCACAATCATGACATATTAACATTCTCTTACAGGCAGGTTTAAACAAAAATGCGAAACATAACGTTAATAATTAAAGGGAGTAACGTATAATGTCAGAACAAAATAAAGAAAATGGATTTACTCa                                                                               <  2:5738915/140‑1 (MQ=255)
                                                          tGCAGATCCTGCCACAACAATCATGTCTTATTAACATTCTGTTACAGGCAGGTTTAAAGAAAAATGCGAAACATATCGTTAATAATTAAGGGAGTa                                                                                                                         <  2:11026822/96‑1 (MQ=255)
                                                            cAGATCCTGCCACAACAATCATGTCTTATTAACATTCTGTTACAGGCAGGTTTAAAGAAAAATGCGAAACATATCGTTAATAATTAAAGGGAGTAACGTATTATGTCAGAAGAAAATAAAGAAAATGGATTTAATCATGt                                                                            >  1:3697619/1‑140 (MQ=255)
                                                               aTCCTGCCACAACAATCATGTCTTATTAACATTCTGTTACAGGCAGGTTTAAAGAAAAATGCGAAACATATCGTTaa                                                                                                                                        >  1:4380859/1‑77 (MQ=255)
                                                                   tGCCACAACAATCATGTCTTATTAACATTCTGTTACAGGCAGGTTTAAAGAAAAATGCGAAACATATCGTTAATAATTAAAGGGAGTa                                                                                                                         <  1:4722251/88‑1 (MQ=255)
                                                                    gCCACAACAATCATGTCTTATTAACATTCTGTTACAGGCAGGTTTAAAGAAAAATGCGAAACATATCGTTAATAATTaaa                                                                                                                                <  2:7618593/80‑1 (MQ=255)
                                                                    gCCACAACAATCATGTCTTATTAACATTCTGTTACAGGCAGGTTTAAAGAAAAATGCGAAACATATCGTTAATAATTAAAGGGAGTAACGtat                                                                                                                   >  2:1662005/1‑93 (MQ=255)
                                                                                   tCTTATTAACATTCTGTTACAGGCAGGTTTAAAGAAAAATGCGAAACATATCGTTAATAATTAAAGGGAGt                                                                                                                          >  1:10657616/1‑71 (MQ=255)
                                                                                       attaACATTCTGTTACAGGCAGGTTTAAAGAAAAATGCGAAACATATCGTTAATAATTAAAgg                                                                                                                              >  2:2636849/1‑63 (MQ=255)
                                                                                          aaCATTCTCTTACAGGCAGGTTTAAAGAAAAATGAGAAACATATCGTTAATAATTAAAGGGAGTAACGTATTATGTCAGAAGAAAATAAAGAAAATGGATTTAATCATGTCAAAACAGTCACCAAAATTATATTTAtttt                                              <  1:9845967/140‑1 (MQ=255)
                                                                                            cATTCTGTTACAGGCAGGTTTAAAGAAAAATGCGAAACATATCGTTAATAATTAAAGGGAGTAACGTATTATGTCAGAAGAAAATAAAGAAAATGGATTTAATCATGTCAAAACATTCACCAAAATTATATTTAtttttt                                            <  2:7139939/140‑1 (MQ=255)
                                                                                            cATTCTGTTACAGGCAGGTTTAAAGAAAAATGCGAAACATATCGTTAATAATTAAAGGGAGTAACGTATTATGTCAGAAGAAAATAAAGAAAATGGATTTAATCATGTCAAAACATTCACCAAAATTATATTTAtttttt                                            >  2:74314/1‑140 (MQ=255)
                                                                                            cATTCTGTTACAGGCAGGTTTAAAGAAAAATGCGAAACATATCGTTAATAATTAAAGGGAGTAACGTATTATGTCAGAAGAAAATAAAGAAAATGGATTTAATCATGTCAAAACATTCACCAAAATTATATTTAtttttt                                            <  2:8028966/140‑1 (MQ=255)
                                                                                             aTTCTGTTACAGGCAGGTTTAAAGAAAAATGCGAAACATATCGTTAATAATTAAAGGGAGTAACGTATTATGTCAGAAGAAAATAAAGAAAATGGATTTAATCATGTCAAAACATTCACCAAAATTATATTTATTTTTTc                                           >  2:1412710/1‑140 (MQ=255)
                                                                                                 tGTTACAGGCAGGTTTAAAGAAAAAAGCGAAACATATCGTTAAAAAATAAAGGGAGTAACGTATTATGTCAGAAGAGAATAAAGAAAATGGATTTAATCATGTCAAAACATTCACCAAAATTATATTTATTTTTTCTGTa                                       <  1:8674957/140‑1 (MQ=255)
                                                                                                  gTTACAGGCAGGTTTAAAGAAAAATGCGAAACATATCGTTAATAATTAAAGGGAGTAACGTATTATGt                                                                                                              >  1:4107132/1‑68 (MQ=255)
                                                                                                             gTTTAAAGAAAAATGCGAAACATATCGTTAATAATTaa                                                                                                                                 <  1:8340768/38‑1 (MQ=255)
                                                                                                                  aaGAAAAATGCGAAACATATCGTTAATAATTAAAGGGAGTAACGTATTATGTCAGAAGAAAATAAAGAAAATGGATTTAATCATGTCAAAACATTCACCAAAATTATATTTATTTTTTCTGTATTAGTTTTTAATGATaa                      <  2:6085621/140‑1 (MQ=255)
                                                                                                                       aaaTGCGAAACATATCGTTAATAATTAAAGGGAGTAACGTATTATGTCAGAAGAAAATAAAGAAAATGGATTTAATCATGTCAAAACATTCACCAAAATTATATTTATTTTTTCTGTATTAGTTTTTAATGATAACGAat                 >  2:3200540/1‑140 (MQ=255)
                                                                                                                               aaCATATCGTTAATAATTAAAGGGAGTAACGTATTATGTCAGAAGAAAATAAAGAAAATGGATTTAATCATGTCAAAACATTCACCAAAATTAGATTTATTTTTTCTGTATTAGTTTTTAATGATAACGAATATAAAAtt         >  2:10871706/1‑140 (MQ=255)
                                                                                                                                         |                                                                                                                                        
CATCTCGTTAATCGGGTACTGCATAGCATTCTCTGTGAAGTGGATAATTGTTAATTATTGCAGATCCTGCCACAACAATCATGTCTTATTAACATTCTGTTACAGGCAGGTTTAAAGAAAAATGCGAAACATATCGTCAATAATTAAAGGGAGTAACGTATTATGTCAGAAGAAAATAAAGAAAATGGATTTAATCATGTCAAAACATTCACCAAAATTATATTTATTTTTTCTGTATTAGTTTTTAATGATAACGAATATAAAATTACCGATG  >  NZ_CP025268/2907700‑2907973

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: