| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 3,016,591 | T→C | *257* (TAA→TAG) | yqeC ← | selenium cofactor biosynthesis protein YqeC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 3,016,591 | 0 | T | C | 99.3% | 2110.5 / NA | 610 | *257* (TAA→TAG) | yqeC | selenium cofactor biosynthesis protein YqeC |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (265/341); minor base A (0/4); total (265/345) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.37e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 610 total aligned reads displayed.
GGGAGTCGAGCCTCGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGAT‑AT‑C‑TTTCAGTAACCCGGAATACCCGGGCCGTTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCGCTTTGTGCAATCGCATTCTCACATTGAGAAAAACGGTTAA > NZ_CP025268/3016455‑3016727 | gggAGTCGAGCCTCGGCTATCAACAATTTGCGCCAGAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCCACCTCAATGGAT‑ATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTa < 2:9187776/140‑1 (MQ=255)gggAGTCGAGCCTCGGCAATCCACCATGTGCGCCATAGCACACGGACACGAGAGCACTTCGACTTTGGCAGCCTCTGTGAAAATCTTCATACCAACCTCAATGGAT‑ATCC‑TTTCACTAACCCGGAATACCCGGGCCGCTa < 2:7421499/140‑1 (MQ=255) aGTCGAGCCTCGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGAT‑CTCC‑TTTCAGNAACCCGGAATAGCCGGGCCGCTAAtt > 1:6867660/1‑140 (MQ=255) aGTCGAGCCTCGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGAT‑ATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAAtt > 2:8507558/1‑140 (MQ=255) aGTCGAGCCTCGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGAT‑ATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAAtt > 1:10717352/1‑140 (MQ=255) aGTCGAGCCTCGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGAT‑ATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAAtt > 1:8682177/1‑140 (MQ=255) aGTCGAGCCTCGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGAT‑ATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAAtt > 1:3492044/1‑140 (MQ=255) aGTCGAGCCTCGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGAT‑ATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAAtt > 1:1361136/1‑140 (MQ=255) aGTCGAGCCTCGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGAT‑ATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAAtt > 2:159656/1‑140 (MQ=255) aGTCGAGCCTCGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATAGTCATCCCAACCTCAATGGAT‑ATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAAtt > 2:3917696/1‑140 (MQ=255) tCGAGCCTCGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGAT‑ATCC‑TGTCAGTAACCCGGAATACCCGGGCCGCTAATTca > 1:7111082/1‑140 (MQ=255) gAGCCTCGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGAT‑ATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTcaca > 1:5532534/1‑140 (MQ=255) gCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGAT‑ATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTgcg < 2:9337083/140‑1 (MQ=255) gCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGAT‑ATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTgcg > 1:11145549/1‑140 (MQ=255) cTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGAT‑ATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTgcgc < 2:7047170/140‑1 (MQ=255) tATCAACAATTTGCGCCATAGCAAACTGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGAT‑ATCC‑TTTAAGTAACCCGGAATACCCGGGCCGATAATTCACAAATCTgcgcg < 2:54769/140‑1 (MQ=255) tCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGAT‑ATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGcgcgcg > 2:4967668/1‑140 (MQ=255) aTTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGAT‑ATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCa < 1:3750627/140‑1 (MQ=255) tttGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGAT‑ATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAg > 1:6642759/1‑140 (MQ=255) ttGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGAT‑ATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAgg < 2:2393402/140‑1 (MQ=255) tGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGAT‑ATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGa < 1:4164010/140‑1 (MQ=255) tGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGAT‑ATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGa < 2:10118972/140‑1 (MQ=255) gcgcCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGAT‑ATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGAt > 1:1987469/1‑140 (MQ=255) cgcCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGAT‑ATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATg < 1:7980035/140‑1 (MQ=255) cgcCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGAT‑ATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATg < 1:7411867/140‑1 (MQ=255) cgcCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGAT‑ATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATg < 2:2754387/140‑1 (MQ=255) cgcCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGAT‑ATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATg < 2:6606147/140‑1 (MQ=255) cgcCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGAT‑ATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATg < 1:2964268/140‑1 (MQ=255) cgcCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGAT‑ATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATg < 2:11027589/140‑1 (MQ=255) cgcCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGAT‑ATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATg < 1:2305178/140‑1 (MQ=255) cgcCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGAT‑ATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATg < 2:2230674/140‑1 (MQ=255) cgcCATAGCAAACCGACAATTTAGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAACGGAT‑ATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATg < 1:9913210/140‑1 (MQ=255) gcCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGAT‑ATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGt > 2:3147439/1‑140 (MQ=255) cATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGAT‑ATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTc > 2:8167267/1‑140 (MQ=255) aTAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGAT‑ATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCt > 2:213155/1‑140 (MQ=255) aGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATAAC‑C‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTg > 1:848983/1‑140 (MQ=255) cAAACGGACAATTTTGCTCTTCGAGTTTTGCTGCCTCTGTGAAAATAGTCCTACCAACCTCAATGGAT‑ATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGAGGTGCGTGta > 1:1026967/1‑140 (MQ=255) aaaCGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGAT‑ATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGtat < 1:7833105/140‑1 (MQ=255) ggACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGAT‑ATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCg < 1:1134304/140‑1 (MQ=255) aCAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGAT‑ATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGcc < 2:4409383/140‑1 (MQ=255) aCAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGAT‑ATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGcc > 2:6033692/1‑140 (MQ=255) aCAATTGTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGAT‑ATCC‑TGTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCATGATGTTCTTGTATATCGcc < 2:4583444/140‑1 (MQ=255) ttttGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGAT‑ATCC‑TGTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAAACTGCGCGCGATTGCAGGATGTTCTTGTATATCGCccagc < 1:5032551/140‑1 (MQ=255) ctctTCGATTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGAT‑ATCC‑TGTCAGTAACCCGGACTACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGAt < 2:10652164/140‑1 (MQ=255) ctctTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCACTGGAT‑ATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGAt < 1:6189745/140‑1 (MQ=255) ctctTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGAT‑ATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGAt < 1:2234943/140‑1 (MQ=255) ctctTCGAGTTGTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGAT‑ATCC‑TTTCAGTAACCCGGAATCCCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGAt < 1:10145690/140‑1 (MQ=255) cGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGAT‑ATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCct < 2:6732932/140‑1 (MQ=255) cGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGAT‑ATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCct > 2:3035018/1‑140 (MQ=255) cGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGAT‑ATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCct > 1:6942229/1‑140 (MQ=255) cGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGAT‑ATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCct > 1:2719346/1‑140 (MQ=255) cGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGAT‑ATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATAGCct > 2:1965972/1‑140 (MQ=255) cGAGTTTAGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGAT‑ATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGATCTTGTATATCGCCCAGCCAGATTGCct < 2:6410877/140‑1 (MQ=255) gTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGAT‑ATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTa < 1:5201064/140‑1 (MQ=255) gTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGAT‑ATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTa < 2:1679457/140‑1 (MQ=255) tttGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGAT‑ATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTAcg < 1:2822984/140‑1 (MQ=255) tttGCAGCCTCTGTGAAAATATTCAGACCAACCTCCATGGAT‑ATCC‑TGTCAGTAACCCGGAAGACCCGGGCCGCTACTTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGAGTGCCTCTAcg < 2:3775666/140‑1 (MQ=255) ttGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGAT‑ATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTAcgt < 2:6942228/140‑1 (MQ=255) gCAGCCTCTGTGAAAATATTCATACCAACCTCACTGGAT‑ATCC‑TTTCAGTAACCCGGCATACCCGGGCCGCTAATTCACAAATCGGCGCGCGATTGCAGGATGTTCTGGTATATCGCCCAGCCAGAGTGCCTCTAcgtcg < 2:3296776/140‑1 (MQ=255) gCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGAT‑ATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTAcgtcg < 2:5095546/140‑1 (MQ=255) gCAGCCACAGTGAAAATATACATACCAACCTCAATGGAT‑ATCC‑TTACATTAACCCGGAATACCCGTGCCGCTAATTCACAAATCTGAGCGCGATTGCAGGATCTACTTGTATATCGCCCAGCCAGATTGCCTCTAcgtcg < 2:9486616/140‑1 (MQ=255) ccTCTGTGAAAATATTCATACCAACCTCAATGGAT‑ATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATg < 1:10894065/99‑1 (MQ=255) cactGTGAAAATATTCATAAAAACCTCATTGGAT‑AT‑CATTTCAGTAAACCGGAATACCCGGTCCGCTAATTCACAAATAAGCTCGAGATTGCAGGATGTTCTTGTAGATCGCCCATCCCGCTTGCCTCTACGTCGtgttg > 2:6273377/3‑140 (MQ=255) gtgAACATATTCATACCAACCTCAATGGAT‑ATCC‑TTTCCGTAACCCGGAATACCCGGGCCGCTAATTCACAAAGCTGCGCGCGCTTGCAGGATGTTCTTGTATCTCGCCCAGCCAGATTGCATCTACGTCGTGTTGTTGc > 2:1791520/1‑140 (MQ=255) gtgAAAATATTCATACCAACCTCAATGGAT‑ATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGc > 2:9721862/1‑140 (MQ=255) tgAAAATATTCATACCAACCTCAATGGAT‑ATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCa < 1:4085686/140‑1 (MQ=255) atTCATACCAACCTCAATGGAT‑ATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTg < 2:779657/140‑1 (MQ=255) ttCATACCAACCTCAATGGAT‑AT‑CATTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGa > 2:4742465/1‑140 (MQ=255) tCATACCAACCTCAATGGAT‑ATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGaa < 1:1703133/140‑1 (MQ=255) cATACCAACCTCAATGGAT‑ATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAg > 1:1882512/1‑140 (MQ=255) cATACCAACCTCAATGGAT‑ATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAg > 2:7651815/1‑140 (MQ=255) ccAACCTCAATGGAT‑ATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGc < 2:866444/140‑1 (MQ=255) cAACCTCAATGGAT‑ATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCt < 1:5848680/140‑1 (MQ=255) aCCTCCATGGAT‑ATCC‑TTTCAGGAACCCGGAATACCCGGGCCGCTCAGTCACATATCTGCGCGCGATTGCAGGTTGTTCTTGTTTTTCGCCCAGCTCTATTGCCTCTACGTCGTGTTGGTGCAGCGGTTGTAGGAGCTCg < 2:11473664/140‑1 (MQ=255) aCCTCAATGGAT‑ATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCg > 2:10907778/1‑140 (MQ=255) aCCTCAATGGAT‑ATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCg > 1:7233389/1‑140 (MQ=255) aCCTCAATGGAT‑ATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCg < 1:8268979/140‑1 (MQ=255) cTCAATGGAT‑ATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCGCt < 1:3316868/140‑1 (MQ=255) ggAT‑ATCC‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCGCTTTGTGc > 2:3672744/1‑140 (MQ=255) atatcc‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCGCTTTGTGCaa > 1:3866158/6‑140 (MQ=255) atcc‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCGCTTTGTGCAATc > 2:4149751/4‑140 (MQ=255) tcc‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCGCTTTGTGCAATCg < 1:5723084/138‑1 (MQ=255) tcc‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCGCTTTGTGCAATCg < 1:4554403/138‑1 (MQ=255) tcc‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGGCGTGTTGTTGCAGCGGTTGAAGGAGCTCGCTTTGTGCAATCg < 1:4845679/138‑1 (MQ=255) c‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCGCTTTGTGCAATCGCa < 1:9582657/140‑1 (MQ=255) c‑TTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCGCTTTGTGCAATCGCa < 1:6084886/140‑1 (MQ=255) ttCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCGCTTTGTGCAATCGCAtt > 1:443665/1‑140 (MQ=255) tCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCGCTTTGTGCAATCGCATtc > 1:2503919/1‑140 (MQ=255) tCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCGCTTTGTGCAATCGCATtc > 2:3588686/1‑140 (MQ=255) tAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCGCTTTGTGCAATCGCATTCTcac > 1:9148618/1‑140 (MQ=255) tAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCGCTTTGTGCAATCGCATTCTcac > 2:2655998/1‑140 (MQ=255) aaTACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCGCTTTGTGCAATCGCATTCTCACATTGAGaa > 2:7961419/1‑140 (MQ=255) ccGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCGCTTTGTGCAATCGCATTCTCACATTGAGAAAAACg < 2:1335113/140‑1 (MQ=255) cGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTCTATCGCCCAGCCAGCTTGCCGCTACGTCTGGTTGTTGCAGCGGTTGAAGGAGCTCGCTTTGTGCAATCGCATTCTCACATTGAGAAAAACgg > 2:5288847/1‑140 (MQ=255) cGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCGCTTTGTGCAATCGCATTCTCACATTGAGAAAAACgg > 1:1191965/1‑140 (MQ=255) cGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGAGGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCGCTTTGTGCAATCGCATTCTCACATTGAGAAAAACgg > 2:8976476/1‑140 (MQ=255) ccGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCGCTTTGTGCAATCGCATTCTCACATTGAGAAAAACGGTTaa < 2:10799226/140‑1 (MQ=255) ccGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCGCTTTGTGCAATCGCATTCTCACATTGAGAAAAACGGTTaa > 1:1529186/1‑140 (MQ=255) ccGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGGCGTGTTGTTGCAGCGGTTGAAGGAGCTCGATTTGTGCAATCGCATTCTCACATTGAGAAAATCGGTTaa > 2:8856222/1‑140 (MQ=255) ccGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTAGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCGCTTTGTGCAATCGAATTCTCACATTGAGCCAAACGGTTaa > 2:11196723/1‑140 (MQ=255) | GGGAGTCGAGCCTCGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGAT‑AT‑C‑TTTCAGTAACCCGGAATACCCGGGCCGTTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCGCTTTGTGCAATCGCATTCTCACATTGAGAAAAACGGTTAA > NZ_CP025268/3016455‑3016727 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |