BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NZ_CP025268	3,309,691	A→G	intergenic (‑82/+26)	nlpI ← / ← pnp	lipoprotein NlpI/polyribonucleotide nucleotidyltransferase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NZ_CP025268	3,309,691	0	A	G	100.0%	1938.6 / NA	555	intergenic (‑82/+26)	nlpI/pnp	lipoprotein NlpI/polyribonucleotide nucleotidyltransferase
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (280/275); total (280/275)

Only 100 of 555 total aligned reads displayed.

CAAGCGTAAGTGCTGTCGCAACGAAACACCAGCGCAAAAAAGGCTTCATTTCCCACTCCCGAAGACCACGGTTGAATGAACGTCCTGTTCCCGGTTGCTAACAAGGCGTCCTGCCCGGTTAAAAG‑CCCC‑CACCGCAGCGGAGGGCAAATGGCAACCTTACTCGCCCTGTTCAGCAGCCGGAGCTTCCGGTGCTGCAGCAGGTTGAGACTGCTCAGTCGCTTCTTTAATGCTCAGACGGATACGGCCCTGGCGATCAACTTCCAGAAC  >  NZ_CP025268/3309561‑3309827

cAAGCGTAAGTGCTGTCGCAACGAAACACCAGCGCAAAAAAGGCTTCATTTCCCACTCCCGAAGACCACGGTTGAATGAACGTCCTGTTCCCGGTTGCTAACAAGGCGTCCTGCCCGGTTAAAAGCCCCC‑CGCCGCAGCg                                                                                                                                  >  2:9404523/1‑140 (MQ=255)

cAAGCGTAAGTGCTGTCGCAACGAAACACCAGCGCAAAAAAGGCTTCATTTCCCACTCCCGAAGACCACGGTTGAATGAACGTCCTGTTCCCGGTTGCTAACAAGGCGTCCTGCCCGGTTAAAAGCCCCC‑CGCCGCAGCg                                                                                                                                  >  1:7939402/1‑140 (MQ=255)

    cGTAAGTGCTGTCGCAACGAAACACCAGCGCAAAAAAGGCTTCATTTCCCACTCCCGAAGACCACGGTTGAATGAACGTCCTGTTCCCGGTTGCTAACAAGGCGTCCTGCCCGGTTAAAAGCCCCC‑CGCCGCAGCGGAgg                                                                                                                              >  1:4981533/1‑140 (MQ=255)

     gTAAGTGCTGTCGCAACGAAACACCAGCGCAAAACAGGCTTCATTTCCCACTCCCGAAGACCACGGTTGAATGAACGTCCTGTTCCCGGTTGCTAACAAGGCGTCCTGCCCGGATAAAAGCCCCC‑CGCCGCAGCGGAggg                                                                                                                             <  2:5785656/140‑1 (MQ=255)

        aGTGCTGTCGCAACGAAACACCAGCGCAAAAAAGGCTTCATTTCCCACTCCCGAAGACCACGGTTGAATGAACGTCCTGTTCCCGGTTGCTAACAAGGCGTCCTGCCCGGTTAAAAGCCCCC‑CGCCGCAGCGGAGGGCaa                                                                                                                          >  2:7730576/1‑140 (MQ=255)

        aGTGCTGTCGCAACGAAACACCAGCGCAAAAAAGGCTTCATTTCCCACTCCCGAAGACCACGGTTGAATGAACGTCCTGTTCCCGGTTGCTAACAAGGCGTCCTGCCCGGTTAAAAGCCCCC‑CGCCGCAGCGGAGGGCaa                                                                                                                          >  1:5271546/1‑140 (MQ=255)

            cTGTCGCAACGAAACACCAGCGCAAAAAAGGCTTCATTTCCCACTCCCGAAGACCACGGTTGAATGAACGTCCTGTTCCCGGTTGCTAACAAGGCGTCCTGCCCGGTTAAAAGCCCCC‑CGCCGCAGCGGAGGGCAAATgg                                                                                                                      >  1:11186767/1‑140 (MQ=255)

            cTGTCGCAACGAAACACCAGCGCAAAAAAGGCTTCATTTCCCACTCCCGAAGACCACGGTTGAATGAACGTCCTGTTCCCGGTTGCTAACAAGGCGTCCTGCCCGGTTAAAAGCCCCC‑CGCCGCAGCGGAGGGCAAATgg                                                                                                                      <  1:2414041/140‑1 (MQ=255)

               tCGCAACGAAACACCAGCGCAAAAAAGGCTTCATTTCCCACTCCCGAAGACCACGGTTGAATGAACGTCCTGTTCCCGGTTGCTAACAAGGCGTCCTGCCCGGTTAAAAGCCCCC‑CGCCGCAGCGGAGGGCAAATGGCaa                                                                                                                   >  2:6857803/1‑140 (MQ=255)

               tCGCAACGAAACACCAGCGCAAAAAAGGCTTCATTTCCCACTCCCGAAGACCACGGTTGAATGAACGTCCTGTTCCCGGTTGCTAACAAGGCGTCCTGCCCGGTTAAAAG‑CCCCACGCCGCAGCGGAGGGCAAATGGCaa                                                                                                                   >  2:9806339/1‑140 (MQ=255)

                cGCAACGAAACACCAGCGCAAAAAAGGCTTCATTTCCCACTCCCGAAGACCACGGTTGAATGAACGTCCTGTTCCCGGTTGCTAACAAGGCGTCCTGCCCGGTTAAAAGCCCCC‑CGCCGCAGCGGAGGGCAAATGGCAAc                                                                                                                  <  1:7502369/140‑1 (MQ=255)

                     cGAAACACCAGCGCAAAAAAGGCTTCATTTCCCACTCCCGAAGACCACGGTTGAATGAACGTCCTGTTCCCGGTTGCTAACAAGGCGTCCTGCCCGGTTAAAAGCCCCC‑CGCCGCAGCGGAGGGCAAATGGCAACCTTAc                                                                                                             <  2:10358770/140‑1 (MQ=255)

                        aaCACCAGCGCAAAAAAGGCTTCATTTCCCACTCCCGAAGACCACGGTTGAATGAACGTCCTGTTCCCGGTTGCTAACAAGGCGTCCTGCCCGGTTAAAAGCCCCC‑CGCCGCAGCGGAGGGCAAATGGCAACCTTACTCg                                                                                                          <  2:8743192/140‑1 (MQ=255)

                        aaCACCAGCGCAAAAAAGGCTTCATTTCCCACTCCCGAAGACCACGGTTGAATGAACGTCCTGTTCCCGGTTGCTAACAAGGCGTCCTGCCCGGTTAAAAGCCCCC‑CGCCGCAGCGGAGGGCAAATGGCAACCTTACTCg                                                                                                          <  1:6878408/140‑1 (MQ=255)

                          cacCAGCGCAAAAAAGGCTTCATTTCCCACTCCCGAAGACCACTGTTGAATGAACGTCCTGTTCCCGGTTGCTAACAAGGCGTCCTGCCCGGTTAAAAGCCCCC‑CGCCGCAGCGGAGGGCAAATGGCAACCTTACTCGcc                                                                                                        <  2:7827414/140‑1 (MQ=255)

                          cacCAGCGCAAAAAAGGCTTCAGTTCCCACTCCCGAAGACCACGGTTGAATGAACGTCCTGTTCCCGGTTGCTAACAAGGCGTCCTGCCCGGTTAAAAGCCCCC‑CGCCGCAGCGGAGGGCAAATGGCAACCTTACTCGcc                                                                                                        <  1:7220738/140‑1 (MQ=255)

                           acCAGCGCACAAAAGGCTTCATTTCCCACTCCCGAAGACCACGGTTGAATGAACGTCCTGTACCCGGTGGCTAACAAGGCGTCCTGCCCGGTTAAAAGCCCCC‑CGCCGCAGCGGAGGGCAAATGGCAACCTTACTCGccc                                                                                                       <  1:10194518/140‑1 (MQ=255)

                              aGCGCAAAAAAGGCTTCATTTCCCACTCCCGAAGACCACGGTTGAATGAACGTCCTGTTCCCGGTTGCTAACAAGGCGTCCTGCCCGGTTAAAAGCCCCC‑CGCCGCAGCGGAGGGCAAATGGCAACCTTACTCGCCCTGt                                                                                                    <  2:514308/140‑1 (MQ=255)

                                ggcAAAATCGGCTTCTTTTCCCACTCCCGAAGACCACGGTTGACTGAAGGTCCTGTTCCCGGTTGCTGACTAGGCGGCCTGCCCGGTTCAGTGCCCCC‑CGGCGCTGCGGGGGGCAAATGGCACGCTTACTCGCCCGGTTc                                                                                                  >  2:7460345/2‑140 (MQ=255)

                                  cAAAAAAGGCTTCATTTCCCACTCCCGAAGACCACGGTTGAATGAACGTCCTGTTCCCGGTTGCTAACAAGGCGTCCTGCCCGGTTAAAAGCCCCC‑CGCCGCAGCGGAGGGCAAATGGCAACCTTACTCGCCCTGTTcag                                                                                                <  1:3711674/140‑1 (MQ=255)

                                           cTTCATTTCCCACTCCCGAAGACCACGGTTGAATGAACGTCCTGTTCCCGGTTGCTAACAAGGCGTCCTGCCCGGTTAAAAGCCCCC‑CGCCGCAGCGGAGGGCAAATGGCACCCTTACTCGCCCTGTTCAGCAGCCGGAg                                                                                       >  2:4216917/1‑140 (MQ=255)

                                             tCATTTCCCACTCCCGAAGACCACGGTTGAATGAACGTCCTGTTCCCGGTTGCTAACAAGGCGTCCTGCCCGGTTAAAAGCCCCC‑CGCCGCAGCGGAGGGCAAATGGCAACCTTACTCGCCCTGTTCAGCAGCCGGAGCt                                                                                     <  1:3470733/140‑1 (MQ=255)

                                               aTTTCCCACTCCCGAAGACCACGGTTGAATGAACGTCCTGTTCCCGGTTGCTAACAAGGCGTCCTGCCCGGTTAAAAGCCCCC‑CGCCGCAGCGGAGGGCTAATGGCAACCTTACTCGCCCTGTTCAGCAGCCGGAGCTTc                                                                                   <  2:4625035/140‑1 (MQ=255)

                                               aTTTCCCACTCCCGAAGACCACGGTTGAATGAACGTCCTGTTCCCGGTTGCTAACAAGGCGTCCTGCCCGGTTAAAAGCCCCC‑CGCCGCAGCGGAGGGCAAATGGCAACCTTACTCGCCCTGTTCAGCAGCCGGAGCTTc                                                                                   >  1:4290060/1‑140 (MQ=255)

                                               aTTTCCCACTCCCGAAGACCACGGTTGAATGAACGTCCTGTTCCCGGTTGCTAACAAGGCGTCCTGCCCGGTTAAAAGCCCCC‑CGCCGCAGCGGAGGGCAAATGGCAACCTTACTCGCCCTGTTCAGCAGCCGGAGCTTc                                                                                   <  2:2493249/140‑1 (MQ=255)

                                               aTTTCCCACTCCCGAAGACCACGGTTGAATGAACGTCCTGGTCCCGGTTGCTAACAAGGCGTCCTGCCCGGTTAAAAGCCCCC‑CGCCGCAGCGGAGGGCAAATGGCAACCTTACTCGCCCTGTTCAGCAGCCGGAGCTTc                                                                                   <  2:11026330/140‑1 (MQ=255)

                                                 ttCCCACTCCCGAAGACCACGGTTGAATGAACGTCCTGTTCCCGGTTGCTAACAAGGCGTCCTGCCCGGTTAAAAGCCCCC‑CGCCGCAGCGGAGGGCAAATGGCAACCTTACTCGCCCTGTTCAGCAGCCGGAGCTTCCg                                                                                 <  1:8227801/140‑1 (MQ=255)

                                                   cccACTCCCGAAGACCACGGTTGAATGAACGTCCTGTTCCCGGTTGCTAACAAGGCGTCCTGCCCGGTTAAAAGCCCCC‑CGCAGCAGCGGAGGGCAAATGGCAACCTTACTCGCCCTGTTCAGCAGCCGGAGCTTCCGGt                                                                               <  2:377862/140‑1 (MQ=255)

                                                    ccACTCCCGAAGACCACGGTTGAATGAACGTCCTGTTCCCGGTTGCTAACAAGGCGTCCTGCCCGGTTAAAAGCCCCC‑CGCCGCAGCGGAGGGCAAATGGCAACCTTACTCGCCCTGTTCAGCAGCCGGAGCTTCCGGtg                                                                              <  2:281504/140‑1 (MQ=255)

                                                    ccACTCCCGAAGACCACGGTTGAATGAACGTCCTGTTCCCGGTTGCTAACAAGGCGTCCTGCCCGGTTAAAAGCCCCC‑CGCCGCAGCGGAGGGCAAATGGCAACCTTACTCGCCCTGTTCAGCAGCCGGAGCTTCCGGtg                                                                              <  2:7378635/140‑1 (MQ=255)

                                                    ccACTCCCGAAGACCACGGTTGAATGAACGTCCTGTTCCCGGTTGCTAACAAGGCGTCCTGCCCGGTTAAAAGCCCCC‑CGCCGCAGCGGAGGGCAAATGGCAACCTTACTCGCCCTGTTCAGCAGCCGGAGCTTCCGGtg                                                                              >  1:166397/1‑140 (MQ=255)

                                                    ccACTCCCGAAGACCACGGTTGAATGAACGTCCTGTTCCCGGTTGCTAACAAGGCGTCCTGCCCGGTTAAAAGCCCCC‑CGCCGCAGCGGAGGGCAAATGGCAACCTTACTCGCCCTGTTCAGCAGCCGGAGCTTCCGGtg                                                                              <  1:1939460/140‑1 (MQ=255)

                                                    ccACTCCCGAAGACCACGGTTGAATGAACGTCCTGTTCCCGGTTGCTAACAAGGCGTCCTGCCCGGTTAAAAGCCCCC‑CGCCGCAGCGGAGGGCAAATGGCAACCTTACTCGCCCTGTTCAGCAGCCGGAGCTTCCGGtg                                                                              >  1:2885502/1‑140 (MQ=255)

                                                          ccGCAGACCACGGTTGAATGAACGTCCTGTTCCCGGTTGCTAACAAGGCGTCCTGCCCGGTTAAAAGCCCCC‑CGCCGCAGCGGAGGGCAAATGGCAACCTTACTCGCCCTGTTCAGCAGCCGGAGCTTCCGGTGCTgcag                                                                        <  1:9652523/140‑1 (MQ=255)

                                                          ccGAAGACCACGGTTGAATGAACGTCCTGTTCCCGGTTGCTAACAAGGCGTCCTGCCCGGTTAAAAGCCCCC‑CGCCGCAGCGGAGGGCAAATGGCAACCTTACTCGCCCTGTTCAGCAGCCGGAGCTTCCGGTGCTgcag                                                                        <  1:6086/140‑1 (MQ=255)

                                                          ccGAAGACCACGGTTGAATGAACGTCCTGTTCCCGGTTGCTAACAAGGCGTCCTGCCCGGTTAAAAGCCCCC‑CGCCGCAGCGGAGGGCAAATGGCAACCTTACTCGCCCTGTTCAGCAGCCGGAGCTTCCGGTGCTgcag                                                                        <  2:6698365/140‑1 (MQ=255)

                                                          ccGAAGACCACGGTTGAATGAACGTCCTGTTCCCGGTTGCTAACAAGGCGTCCTGCCCGGTTAAAAGCCCCC‑CGCCGCAGCGGAGGGCAAATGGCAACCTTACTCGCCCTGTTCAGCAGCCGGAGCTTCCGGTGCTgcag                                                                        <  2:2004920/140‑1 (MQ=255)

                                                          ccGAAGACCACGGTTGAATGAACGTCCTGTTCCCGGTTGCTAACAAGGCGTCCTGCCCGGTTAAAAGCCCCC‑CGCCGCAGCGGAGGGCAAATGGCAACCTTACTCGCCCTGTTCAGCAGCCGGAGCTTCCGGTGCTgcag                                                                        <  1:9949068/140‑1 (MQ=255)

                                                          ccGAAGACCACGGTTGAATGAACGTCCTGTTCCCGGTTGCTAACAAGGCGTCCTGCCCGGTTAAAAGCCCCC‑CGCCGCAGCGGAGGGCAAATGGCAACCTTACTCGCCCTGTTCAGCAGCCGGAGCTTCCGGTGCTgcag                                                                        <  2:337303/140‑1 (MQ=255)

                                                          ccGAAGACCACGGTTGAATGAACGTCCTGTTCCCGGTTGCTAACAAGGCGTCCTGCCCGGTTAAAAGCCCCC‑CGCCGCAGCGGAGGGCAAATGGCAACCTTACTCGCCCTGTTCAGCAGCCGGAGCTTCCGGTGCTgcag                                                                        <  2:497769/140‑1 (MQ=255)

                                                          ccGAAGACCACGGTTGAATGAACGTCCTGTTCCCGGTTGCTAACAAGGCGTCCTGCCCGGTTAAAAGCCCCC‑CGCCGCAGCGGAGGGCAAATGGCAACCTTACTCGCCCTGTTCAGCAGCCGGAGCTTCCGGTGCTgcag                                                                        <  2:3957744/140‑1 (MQ=255)

                                                          ccGAAGACCACGGTTGAATGAACGTCCTGTTCCCGGTTGCTAACAAGGCGTCCTGCCCGGTTAAAAGCCCCC‑CGCCGCAGCGGAGGGCAAATGGCAACCTTACTCGCCCTGTTCAGCAGCCGGAGCTTCCGGTGCTgcag                                                                        <  2:9560124/140‑1 (MQ=255)

                                                          ccGAAGACCACGGTTGAATGAACGTCCTGTTCCCGGTTGCTAACAAGGCGTCCTGCCCGGTTAAAAGCCCCC‑CGCCGCAGCGGAGGGCAAATGGCAACCTTACTCGCCCTGTTCAGCAGCCGGAGCTTCCGGTGCTgcag                                                                        <  1:4123467/140‑1 (MQ=255)

                                                          ccGAAGACCACGGTTGAATGAACGTCCTGTTCCCGGTTGCTAACAAGGCGTCCTGCCCGGTTAAAAGCCCCC‑CGCCGCAGCGGAGGGCAAATGGCAACCTTACTCGCCCTGTTCAGCAGCCGGAGCTTCCGGTGCTgcag                                                                        <  1:3886483/140‑1 (MQ=255)

                                                          ccGAAGACCACGGTTGAATGAACGTCCTGTTCCCGGTTGCTAACAAGGCGTCCTGCCCGGTTAAAAGCCCCC‑CGCCGCAGCGGAGGGCAAATGGCAACCTTACTCGCCCTGTTCAGCAGCCGGAGCTTCCGGTGCTgcag                                                                        <  1:9402729/140‑1 (MQ=255)

                                                            gAAGACCACGGTTGAATGAACGTCCTGTTCCCGGTTGCTAACAAGGCGTCCTGCCCGGTTAAAAGCCCCC‑CGCCGCAGCGGAGGGCAAATGGCAACCTTACTCGCCCTGTTCAGCAGCCGGAGCTTCCGGTGCTgcagca                                                                      >  1:11060282/1‑140 (MQ=255)

                                                             aaGACCACGGTTGAATGAACGTCCTGTTCCCGGTTGCTAACAAGGCGGCCTGCCCGGTTAAAAGCCCCC‑CGCCGCAGCGGAGGGCAAATGGCAACCTTACTCGCCCTGTTCAGCAGCCGGAGCTTCCGGTGCTGcagcag                                                                     >  1:10028886/1‑140 (MQ=255)

                                                               gACCACGGTTGAATGAACGTCCTGTTCCCGGTTGCTAACAAGGCGTCCTGCCCGGTTAAAAGCCCCC‑CGCCGCAGCGGAGGGCAAATGGCAACCTTACTCGCCCTGTTCAGCAGCCGGAGCTTCCGGTGCTGCAGCAGGt                                                                   <  1:10385922/140‑1 (MQ=255)

                                                               gACCACGGTTGAATGAACGTCCTGTTCCCGGTTGCTAACAAGGCGTCCTGCCCGGTTAAAAGCCCCC‑CGCCGCAGCGGAGGGCAAATGGCAACCTTACTCGCCCTGTTCAGCAGCCGGAGCTTCCGGTGCTGCAGCAGGt                                                                   <  2:8237955/140‑1 (MQ=255)

                                                                  cACGGTTGAATGAACGTCCTGTTCCCGGTTGCTAACAAGGCGTCCTGCCCGGTTAAAAGCCCCC‑CGCCGCAGCGGAGGGCAAATGGCAACCTTACTCGCCCTGTTCAGCAGCCGGAGCTTCCGGTGCTGCAGCAGGTTga                                                                >  2:10443573/1‑140 (MQ=255)

                                                                  cACGGTTGAATGAACGTCCTGTTCCCGGTTGCTAACAAGGCGTCCTGCCCGGTTAAAAGCCCCC‑CGCCGCAGCGGAGGGCAAATGGCAACCTTACTCGCCCTGTTCAGCAGCCGGAGCTTCCGGTGCTGCAGCAGGTTga                                                                <  2:4848306/140‑1 (MQ=255)

                                                                    cGGTTGAATGAACGTCCTGTTCCCGGTTGCTAACATGGCGTCCTGCCCGGTTAAAAGCCCCC‑CGCCGCAGCGGAGGGCAAATGGCAACCTTACTCGCCCTGTTCAGCAGCCGGAGCTTCCGGTGCTGCAGCAGGTTgaga                                                              >  2:10248950/1‑140 (MQ=255)

                                                                    cGGTTGAATGAACGTCCTGTTCCCGGTTGCTAACAAGGCGTCCTGCCCGGTTCAAAGCCCCC‑CGCCGCAGCGGAGGGCAAATGGCAACCGTACTCGCCCTGTTCAGCAGCCGGAGCTTCCGGTGCTGCAGCAGGTTgagc                                                              >  1:2608529/1‑139 (MQ=255)

                                                                    cGGTTGAATGAACGTCCTGTTCCCGGTTGCTAACAAGGCGTCCTGCCCGGTTAAAAGCCCCC‑CGCCGCAGCGGAGGGCAAATGGCAACCTTACTCGCCCTGTTCAGCAGCCGGAGCTTCCGGTGCTGCAGCAGGTTgaga                                                              >  1:3078529/1‑140 (MQ=255)

                                                                    cGGTTGAATGAACGTCCTGTTCCCGGTTGCTAACAAGGCGTCCTGCCCGGTTAAAAGCCCCC‑CGCCGCAGCGGAGGGCAAATGGCAACCTTACTCGCCCTGTTCAGCAGCCGGAGCTTCCGGTGCTGCAGCAGGTTgaga                                                              >  2:10009626/1‑140 (MQ=255)

                                                                    cGGTTGAATGAACGTCCTGTTCCCGGTTGCTAACAAGGCGTCCTGACCGGTTAAAAGCCCCC‑CGCCGCAGCGGAGGGCAAATGGCAACCTTACTCGCCCTGTTCAGCAGCCGGAGCTTCCGGTGCTGCAGCAGGTTgaga                                                              >  2:9218250/1‑140 (MQ=255)

                                                                        tgaatgaaCGTCCTGTTCCCGGTTGCTAACAAGGCGTCCTGCCCGGTTAAAAGCCCCC‑CGCCGCAGCGGAGGGCAAATGGCAACCTTACTCGCCCTGTTCAGCAGCCGGAGCTTCCGGTGCTGCAGCAGGTTGAGACTGc                                                          <  2:1529840/140‑1 (MQ=255)

                                                                           atgaaCGTCCTGTTCCCGGTTGCTAACAAGGCGTCCTGCCCGGTTAAAAGCCCCC‑CGCCGCAGCGGAGGGCAAATGGCAACCTTACTCGCCCTGTTCAGCAGCCGGAGCTTCCGGTGCTGCAGCAGGTTGAGACTGCTCa                                                       <  2:3585943/140‑1 (MQ=255)

                                                                             gaaCGTCCTGTTCCCGGTTGCTAACAAGGCGTCCTGCCCGGTTAAAAGCCCCC‑CGCCGCAGCGGAGGGCAAATGGCAACCTTACTCGCCCTGTTCAGCAGCCGGAGCTTCCGGTGCTGCAGCAGGTTGAGACTGCTCAGt                                                     <  1:21863/140‑1 (MQ=255)

                                                                               aCGTCCTGTTCCCGGTTGCTAACAAGGCGTCCTGCCCGGTTAAAAGCCCCC‑CGCCGCAGCGGAGGGCAAATGGCAACCTTACTCGCCCTGTTCAGCAGCCGGAGCTTCCGGTGCTGCAGCAGGTTGAGACTGCTCAGTCg                                                   >  1:3220257/1‑140 (MQ=255)

                                                                                cGTCCTGTTCCCGGTTGCTAACAAGGCGTCCTGCCCGGTTAAAAGCCCCC‑CGCCGCAGCGGAGGGCAAATGGCAACCTTACTCGCCCTGTTCAGCAGCCGGAGCTTCCGGTGCTGCAGCAGGTTGAGACTGCTCAGTCGc                                                  <  1:4680917/140‑1 (MQ=255)

                                                                                cGTCCTGTTCCCGGTTGCTAACAAGGCGTCCTGCCCGGTTAAAAGCCCCC‑CGCCGCAGCGGAGGGCAAATGGCAACCTTACTCGCCCTGTTCAGCAGCCGGAGCTTCCGGTGCTGCAGCAGGTTGAGACTGCTCAGTCGc                                                  <  2:2227871/140‑1 (MQ=255)

                                                                                  tCCTGTTCCCGGTTGCTAACAAGGCGTCCTGCCCGGTTAAAAGCCCCC‑CGCCGCAGCGGAGGGCAAATGGCAACCTTACTCGCCCTGTTCAGCAGCCGGAGCTTCCGGTGCTGCAGCAGGTTGAGACTGCTCAGTCGctt                                                <  1:7031962/140‑1 (MQ=255)

                                                                                    cTGTTCCCGGTTGCTAACAAGGCGTCCTGCCCGGTTAAAAGCCCCC‑CGCCGCAGCGGAGGGCAAATGGCAACCTTACTCGCCCTGTTCAGCAGCCGGAGCTTCCGGTGCTGCAGCAGGTTGAGACTGCTCAGTCGcttct                                              >  1:5095905/1‑140 (MQ=255)

                                                                                    cTGTTCCCGGTTGCTAACAAGGCGTCCTGCCCGGTTAAAAGCCCCC‑CGCCGCAGCGGAGGGCAAATGGCAACCTTACTCGCCCTGTTCAGCAGCCGGAGCTTCCGGTGCTGCAGCAGGTTGAGACTGCTCAGTCGcttct                                              >  1:10819225/1‑140 (MQ=255)

                                                                                      gTTCCCGGTTGCTAACAAGGCGTCCTGCCCGGTTAAAAGCCCCC‑CGCCGCAGCGGAGGGCAAATGGCAACCTTACTCGCCCTGTTCAGCAGCCGGAGCTTCCGGTGCTGCAGCAGGTTGAGACTGCTCAGTCGCTTCttt                                            >  1:6204945/1‑140 (MQ=255)

                                                                                      gTTCCCGGTTGCTAACAAGGCGTCCTGCCCGGTTAAAAGCCCCC‑CGCCGCAGCGGAGGGCAAATGGCAACCTTACTCGCCCTGTTCAGCAGCCGGAGCTTCCGGTGCTGCAGCAGGTTGAGACTGCTCAGTCGCTTCttt                                            <  2:8979129/140‑1 (MQ=255)

                                                                                       ttCCCGGTTGCTAACAAGGCGTCCTGCCCGGTTAAAAGCCCCC‑CGCCGCAGCGGAGGGCAAATGGCAACCTTACTCGCCCTGTTCAGCAGCCGGAGCTTCCGGTGCTGCAGCAGGTTGAGACTGCTCAGTCGCTTCTTTa                                           >  1:8786019/1‑140 (MQ=255)

                                                                                       ttCCCGGTTGCTAACAAGGCGTCCTGCCCGGTTAAAAGCCCCC‑CGCCGCAGCGGAGGGCAAATGGCAACCTTACTCGCCCTGTTCAGCAGCCGGAGCTTCCGGTGCTGCAGCAGGTTGAGACTGCTCAGTCGCGTCTTTa                                           >  1:7130186/1‑140 (MQ=255)

                                                                                            ggTTGCTAACAAGGCGTCCTGCCCGGTTAAAAGCCCCC‑CGCCGCAGCGGAGGGCAAATGGCAACCTTACTCGCCCTGTTCAGCAGCCGGAGCTTCCGGTGCTGCAGCAGGTTGAGACTGCTCAGTCGCTTCTTTAATGCt                                      <  1:8945325/140‑1 (MQ=255)

                                                                                            ggTTGCTAACAAGGCGTCCTGCCCGGTTAAAAGCCCCC‑CGCCGCAGCGGAGGGCAAATGGCAACCTTACTCGCCCTGTTCAGCAGCCGGAGCTTCCGGTGCTGCAGCAGGTTGAGACTGCTCAGTCGCTTCTTTAATGCt                                      <  2:11461625/140‑1 (MQ=255)

                                                                                            ggTTGCTAACAAGGCGTCCTGCCCGGTTAAAAGCCCCC‑CGCCGCAGCGGAGGGCAAATGGCAACCTTACTCGCCCTGTTCAGCAGCCGGAGCTTCCGGTGCTGCAGCAGGTTGAGACTGCTCAGTCGCTTCTTTAATGCt                                      >  2:6121833/1‑140 (MQ=255)

                                                                                            ggTTGCTAACAAGGCGTCCTGCCCGGTTAAAAGCCCCC‑CGCCGCAGCGGAGGGCAAATGGCAACCTTACTCGCCCTGTTCAGCAGCCGGAGCTTCCGGTGCTGCAGCAGGTTGAGACTGCTCAGTCGCTTCTTTAATGCt                                      <  2:5532899/140‑1 (MQ=255)

                                                                                            ggTGGCTAACAAGGCGTCCTGCCCGGTTAAAAGCCCCC‑CGCCGCAGCGGAGGGCAAATGGCAACCTTACTCGCCCTGTTCAGCAGCCGGAGCTTCCGGTGCTGCAGCAGGTTGAGACTGCTCAGTCGCTTCTTTAATGCt                                      <  1:9910813/140‑1 (MQ=255)

                                                                                               tGCTAACAAGGCGTCCTGCCCGGTTAAAAGCCCCC‑CGCCGCAGCGGAGGGCAAATGGCAACCTTACTCGCCCTGTTCAGCAGCCGGAGCTTCCGGTGCTGCAGCAGGTTGAGACTGCTCAGTCGCTTCTTTAATGCTCAg                                   >  1:5707750/1‑140 (MQ=255)

                                                                                                 cTAACAAGGCGTCCTGCCCGGTTAAAAGCCCCC‑CGCCGCAGCGGAGGGCAAATGGCAACCTTACTCGCCCTGTTCAGCAGCCGGAGCTTCCGGTGCTGCAGCAGGTTGAGACTGCTCAGTCGCTTCTTTAATGCTCAGAc                                 >  2:11364714/1‑140 (MQ=255)

                                                                                                 cTAACAAGGCGTCCTGCCCGGTTAAAAGCCCCC‑CGCCGCAGCGGAGGGCAAATGGCAACCTTACTCGCCCTGTTCAGCAGCCGGAGCTTCCGGTGCTGCAGCAGGTTGAGACTGCTCAGTCGCTTCTTTAATGCTCAGAc                                 >  1:105045/1‑140 (MQ=255)

                                                                                                 cTAACAAGGCGTCCTGCCCGGTTAAAAGCCCCC‑CGCCGCAGCGGAGGGCAAATGGCAACCTTACTCGCCCTGTTCAGCAGCCGGAGCTTCCGGTGCTGCAGCAGGTTGAGACTGCTCAGTCGCTTCTTTAATGCTCAGAc                                 >  2:6240127/1‑140 (MQ=255)

                                                                                                 cTAACAAGGCGTCCTGCCCGGTTAAAAGCCCCC‑CGCCGCAGCGGAGGGCAAATGGCAACCTTACTCGCCCTGTTCAGCAGCCGGAGCTTCCGGTGCTGCAGCAGGTTGAGACTGCTCAGTCGCTTCTTTAATGCTCAGAc                                 >  1:6681049/1‑140 (MQ=255)

                                                                                                   aaCAAGGCGTCCTGCCCGGTTAAAAGCCCCC‑CGCCGCAGCGGAGGGCAAATGGCAACCTTACTCGCCCTGTTCAGCAGCCGGAGCTTCCGGTGCTGCAGCAGGTTGAGACTGCTCAGTCGCTTCTTTAATGCTCAGACgg                               >  2:5254951/1‑140 (MQ=255)

                                                                                                      acggCGTCCTGCCCGGTTAACAGCCCCC‑CGCCGCAGCGGAGGGCAAATGGCAACCGTACTCGCCCTGTTCAGCAGCCGGAGCTTCCGGTGCTGCAGCAGGTTGAGACTGCTCAGTCGCTTCTTTAATGCTCAGACGGATa                            <  2:7959901/138‑1 (MQ=255)

                                                                                                      aaGGCGTCCGGCCCGGTTAAAAGCCCCC‑CGCCGCAGCGGAGGGCAAATGGCAACCTTACTCGCCCTGTTCAGCAGCCGGAGCTTCCGGTGCTGCAGCAGGTTGAGACTGCTCAGTCGCTTCTTTAATGCTCAGACGGATa                            <  1:7695644/140‑1 (MQ=255)

                                                                                                        ggCGTCCTGCCCGGTTAAAAGCCCCC‑CGCCGCAGCGGAGGGCAAATGGCAACCTTACTCGCCCTGTTCAGCAGCCGGAGCTTCCGGTGCTGCAGCAGGTTGAGACTGCTCAGTCGCTTCTTTAATGCTGAGACGGATACg                          >  1:8650403/1‑140 (MQ=255)

                                                                                                        ggCGTCCTGCCCGGTTAAAAGCCCCC‑CGCCGCAGCGGAGGGCAAATGGCAACCTTACTCGCCCTGTTCAGCAGCCGGAGCTTCCGGTGCTGCAGCAGGTTGAGACTGCTCAGTCGCTTCTTTAATGCTCAGACGGATACg                          <  2:9111242/140‑1 (MQ=255)

                                                                                                        ggCGTCCTGCCCGGTTAAAAGCCCCC‑CGCCGCAGCGGAGGGCAAATGGCAACCTTACTCGCCCTGTTCAGCAGCCGGAGCTTCCGGTGCTGCAGCAGGTTGAGACTGCTCAGTCGCGTCTTTAATGCTCAGACGGATACg                          >  2:7014808/1‑140 (MQ=255)

                                                                                                         gCGTCCTGCCCGGTTAAAAGCCCCC‑CGCCGCAGCGGAGGGCAAATGGCAACCTTACTCGCCCTGTTCAGCAGCCGGAGCTTCCGGTGCTGCAGCAGGTTGAGACTGCTCAGACGCTTCTTTAATGCTCAGACGGATACgg                         >  2:10855470/1‑140 (MQ=255)

                                                                                                            tCCTGCCCGGTTAAAAGCCCCC‑CGCCGCAGCGGAGGGCAAATGGCAACCTTACTCGCCCTGTTCAGCAGCCGGAGCTTCCGGTGCTGCAGCAGGTTGAGACTGCTCAGTCGCTTCTTTACTGCTCAGACGGATACGGccg                      >  1:6465929/1‑139 (MQ=255)

                                                                                                            tCCTGCCCGGTTAAAAGCCCCC‑CGCCGCAGCGGAGGGCAAATGGCAACCTTACTCGCCCTGTTCAGCAGCCGGAGCTTCCGGTGCTGCAGCAGGTTGAGACTGCTCAGTCGCTTCTTTAATGCTCAGACGGATACGGccc                      <  2:3090459/140‑1 (MQ=255)

                                                                                                            tCCTGCCCGGTTAAAAGCCCCC‑CGCCGCAGCGGAGGGCAAATGGCAACCTTACTCGCCCTGTTCAGCAGCCGGAGCTTCCGGTGCTGCAGCAGGTTGAGACTGCTCAGTCGCTTCTTTAATGCTCAGACGGATACGGccc                      >  1:4516816/1‑140 (MQ=255)

                                                                                                            tCCTGCCCGGTGACAAGCCCCC‑CGCCGCAGCGGAGGGCAAATGGCAACCGTACTCGCCCTGATCAGCAGCCGGAGCTTCCGGTGCTGCAGCAGGTTGAGACTGCTCAGTCGCTTCATTAATGCTCAGACGGATACGGccc                      <  2:10623363/140‑1 (MQ=255)

                                                                                                              cTGCCCGGTTAAAAGCCCCC‑CGCCGCAGCGGAGGGCAAATGGCAACCTTACTCGCCCTGTTCAGCAGCCGGAGCTTCCGGTGCTGCAGCAGGTTGAGACTGCTCAGTCGCTTCTTTAATGCTCAGACGGATACGGCCCTg                    <  1:1177045/140‑1 (MQ=255)

                                                                                                                    ggTTAAAAGCCCCC‑CGCCGCAGCGGAGGGCAAATGGCAACCTTACTCGCCCTGTTCAGCAGCCGGAGCTTCCGGTGCTGCAGCAGGTTGAGACTGCTCAGTCGCTTCTTTAATGCTCAGACGGATACGGCCCTGGCGATc              >  1:9045880/1‑140 (MQ=255)

                                                                                                                     gTTAAAAGCCCCC‑CGCCGCAGCGGAGGGCAAATGGCAACCTTACTCGCCCTGTTCAGCAGCCGGAGCTTCCGGTGCTGCAGCAGGTTGAGACTGCTCAGTCGCTTCTTTAATGCTCAGACGGATACGGCCCTGGCGATCa             >  2:7533856/1‑140 (MQ=255)

                                                                                                                      ttAAAAGCCCCC‑CGCCGCAGCGGAGGGCAAATGGCAACCTTACTCGCCCTGTTCAGCAGCCGGAGCTTCCGGTGCTGCAGCAGGTTGAGACTGCTCAGTCGCTTCTTTAATGCTCAGACGGATACGGCCCTGGCGATCaa            >  2:1753568/1‑140 (MQ=255)

                                                                                                                      ttAAAAGCCCCC‑CGCCGCAGCGGAGGGCAAATGGCAACCTTACTCGCCCTGTTCAGCAGCCGGAGCTTCCGGTGCTGCAGCAGGTTGAGACTGCTCAGTCGCTTCTTTAATGCTCAGACGGATACGGCCCTGGCGATCaa            >  1:1497533/1‑140 (MQ=255)

                                                                                                                      ttAAAAGCCCCC‑CGCCGCAGCGGAGGGCAAATGGCAACCTTACTCGCCCTGTTCAGCAGCCGGAGCTTCCGGTGCTGCAGCAGGTTGAGACTGCTCAGTCGCTTCTTTAATGCTCAGACGGATACGGCCCGGGCGAGCaa            >  1:9795270/1‑140 (MQ=255)

                                                                                                                           agccccc‑cGCCGCAGCGGAGGGCAAATGGCAACCTTACTCGCCCTGTTCAGCAGCCGGAGCTTCCGGTGCTGCAGCAGGTTGAGACTGCTCAGTCGCTTCTTTAATGCTCAGACGGCTACGGCCCTGGCGATCAACTTcc       >  1:5568141/4‑140 (MQ=255)

                                                                                                                                cc‑cGCCGCAGCGGAGGGCAAATGGCAACCTTACTCGCCCTGTTCAGCAGCCGGAGCTTCCGGTGCTGCAGCAGGTTgaga                                                              <  1:10709067/80‑1 (MQ=255)

                                                                                                                                cc‑cGCCGCAGCGGAGGGCAAATGGCAACCTTACTCGCCCTGTTCAGCAGCCGGAGCTTCCGGTGCTGCAGCAGGTTGAGACTGCTCAGTCGCTTCTTTAATGCTCAGACGGATACGGCCCTGGCGCTCAACTTAAAGAAc  >  1:3283655/1‑140 (MQ=255)

                                                                                                                                cc‑cGCCGCAGCGGAGGGCAAATGGCAACCTTACTCGCCCTGTTCAGCAGCCGGAGCTTCCGGTGCTGCAGCAGGTTGAGACTGCTCAGTCGCTTCTTTAATGCTCAGACGGATACGGCCCTGGCGATCAACTTCCAGAAc  >  1:850856/1‑140 (MQ=255)

CAAGCGTAAGTGCTGTCGCAACGAAACACCAGCGCAAAAAAGGCTTCATTTCCCACTCCCGAAGACCACGGTTGAATGAACGTCCTGTTCCCGGTTGCTAACAAGGCGTCCTGCCCGGTTAAAAG‑CCCC‑CACCGCAGCGGAGGGCAAATGGCAACCTTACTCGCCCTGTTCAGCAGCCGGAGCTTCCGGTGCTGCAGCAGGTTGAGACTGCTCAGTCGCTTCTTTAATGCTCAGACGGATACGGCCCTGGCGATCAACTTCCAGAAC  >  NZ_CP025268/3309561‑3309827

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`