BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NZ_CP025268	3,347,754	A→G	164 (TAA→TAG)	ptsN →	PTS IIA‑like nitrogen regulatory protein PtsN

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NZ_CP025268	3,347,754	0	A	G	100.0%	2605.9 / NA	743	164 (TAA→TAG)	ptsN	PTS IIA‑like nitrogen regulatory protein PtsN
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (332/411); total (332/411)

Only 100 of 755 total aligned reads displayed.

ACGCACCTGCATACTCTGTCGCTGGTGGCGAAACGTCTGGCGGACAAAACCATCTGCCGCCGTTTACGCGCAGCCCAGAGCGATGAAGAGCTGTATCAAATCATTACGGATACCGAAGGTACTCCGGATGAAGCGTAATTATTCGGTAATGTCTCTTTTAGACGTTGTGAGGAGAAACAGTACATGGTACTGATGATCGTCAGCGGACGTTCAGGTTCAGGTAAATCTGTCGCCCTGCGTGCGCTGGAAGATATGGGTTTTTACTGCGTGGATA  >  NZ_CP025268/3347617‑3347890

 cGCACCTGCATACTCTGTCGCTGGTGGCGAAACGTCTGGCGGACAAAACCATCTGCCGCCGTTTACGCGCAGCCCAGAGCGATGAAGAGCTGTATCAAATCATTACGGATACCGAAGGTACTCCGGATGAAGCGTAgtta                                                                                                                                       >  2:803830/1‑140 (MQ=255)

 cGCACCTGCATACTCTGTCGCTGGTGGCGAAACGTCTGGCGGAAAAAACCATCTGCCGCCGTTTACGCGCTGCCCAGTGCGATGAAGTGCTGTATCAAAGCATTAAGGATACCGAAGGTACTCCGGATGTAGCGTAgtta                                                                                                                                       >  2:9864217/1‑140 (MQ=255)

   cACCTGCATACTCTGTCGCTGGTGGCGAAACGTCTGGCGGACAAAACCATCTGCCGCCGTTTACGCGCAGCCCAGAGCGATGAAGAGCTGTATCAAATCATTACGGATACCGAAGGTACTCCGGATGAAGCGTAgttatt                                                                                                                                     <  1:5065266/140‑1 (MQ=255)

    aCCTGCATACTCTGTCGCTGGTGGCGAAACGTCTGGCGGACAAAACCATCTGCCGCCGTTTACGCGCAGCCCAGAGCGATGAAGAGCTGTATCAAATCATTACGGATACCGAAGGTACTCCGGATGAAGCGTAGttcttc                                                                                                                                    >  1:1203379/1‑140 (MQ=255)

    aCCTGCATACTCTGTCGCTGGTGGCGAAACGTCTGGCGGACAAAACCATCTGCCGCCGTTTACGCGCAGCCCAGAGCGATGAAGAGCTGTATCAAATCATTACGGATACCGAAGGTACTCCGGATGAAGCGTAGTTATTc                                                                                                                                    <  2:3766677/140‑1 (MQ=255)

       tGCATACTCTGTCGCTGGTGGCGAAACGTCTGGCGGACAAAACCATCTGCCGCCGTTTACGCGCAGCCCAGAGCGATGAAGAGCTGTATCAAATCATTACGGATACCGAAGGTACTCCGGATGAAGCGTAGTTATTCGGt                                                                                                                                 <  1:10955498/140‑1 (MQ=255)

            aCTCTGTCGCTGGTGGCGAAACGTCTGGCGGACAAAACCATCTGCCGCCGTTTACGCGCAGCCCAGAGCGATGAAGAGCTGTATCAAATCATTACGGATACCGAAGGTACTCCGGATGAAGCGTAGTTATTCGGTAATGt                                                                                                                            <  1:9880693/140‑1 (MQ=255)

              tctGTCGCTGGTGGCGAAACGTCTGGCGGACAAAACCATCTGCCGCCGTTTACGCGCAGCCCAGAGCGATGAAGAGCTGTATCAAATCATTACGGATACCGAAGGTACTCCGGATGAAGCGTAGTTATTCGGTAATGtct                                                                                                                          >  2:4758794/1‑140 (MQ=255)

                tGTCGCTGGTGGCGAAACGTCTGGCGGACAAAACCATCTGCCGCCGTTTACGCGCAGCCCAGAGCGATGAAGAGCTGTATCAAATCATTACGGATACCGAAGGTACTCCGGATGAAGCGTAGTTATTCGGTAATGTctct                                                                                                                        >  1:4150834/1‑140 (MQ=255)

                tGTCGCTGGTGGCGAAACGTCTGGCGGACAAAACCATCTGCCGCCGTTTACGCGCAGCCCAGAGCGATGAAGAGCTGTATCAAATCATTACGGATACCGAAGGTACTCCGGATGAAGCGTAGTTATTCGGTAATGTctct                                                                                                                        >  2:3896917/1‑140 (MQ=255)

                tGTCGCTGGTGGCGAAACGTCTGGCGGACAAAACCATCTGCCGCCGTTTACGCGCAGCCCAGAGCGATGAAGAGCTGTATCAAATCATTACGGATACCGAAGGTACTCCGGATGAAGCGTAGTTATTCGGTAATGTctct                                                                                                                        >  2:223013/1‑140 (MQ=255)

                  tCGCTGGTGGCGAAACGTCTGGCGGACAAAACCATCTGCCGCCGTTTACGCGCAGCCCAGAGCGATGAAGAGCTGTATCAAATCATTACGGATACCGAAGGTACTCCGGATGAAGCGTAGTTATTCGGTAATGTCTCttt                                                                                                                      >  1:5664270/1‑140 (MQ=255)

                   cGCTGGTGGCGAAACGTCTGGCGGACAAAACCATCTGCCGCCGTTTACGCGCAGCCCAGAGCGATGAAGAGCTGTATCAAATCATTACGGATACCGAAGGTACTCCGGATGAAGCGTAGTTATTCGGTAATGTCTCtttt                                                                                                                     >  1:6493709/1‑140 (MQ=255)

                   cGCTGGTGGCGAAACGTCTGGCGGACAAAACCATCTGCCGCCGTTTACGCGCAGCCCAGAGCGATGAAGAGCTGTATCAAATCATTACGGATACCGAAGGTACTCCGGATGAAGCGTAGTTATTCGGTAATGTCTCtttt                                                                                                                     >  2:3597082/1‑140 (MQ=255)

                   cGCTGGTGGCGAAACGTCTGGCGGACAAAACCATCTGCCGCCGTTTACGCGCAGCCCAGAGCGATGAAGAGCTGTATCAAATCATTACGGATACCGAAGGTACTCCGGATGAAGCGTAGTTATTCGGTAATGTCTCtttt                                                                                                                     >  1:10765245/1‑140 (MQ=255)

                   cGCTGGTGGCGAAACGTCTGGCGGACAAAACCATCTGCCGCCGTTTACGCGCAGCCCAGAGCGATGAAGAGCTGTATCAAATCATTACGGATACCGAAGGTACTCCGGATGAAGCGTAGTTAGTCGGTAATGTCTCtttt                                                                                                                     >  2:2627021/1‑140 (MQ=255)

                        gtggCGAAACGTCTGGCGGACAAAACCATCTGCCGCCGTTTACGCGCAGCCCAGAGCGATGAAGAGCTGTAGCAAATCATTACGGATACCGAAGGTACTCCGGATGAAGCGTAGTTATTCGGTAATGTCTCTTTTCGACg                                                                                                                >  1:869202/1‑140 (MQ=255)

                            cGAAACGTCTGGCGGACAAAACCATCTGCCGCCGTTTACGCGCAGCCCAGAGCGATGACGAGCTGTATCAAATCATCACGGATAGCGAAGGTACGCCGGCTGAAGCGTAGTTCGTCGGGAATGTCTCGTTTAGACGgtgt                                                                                                            >  2:6602802/1‑140 (MQ=255)

                            cGAAACGTCTGGCGGACAAAACCATCTGCCGCCGTTTACGCGCAGCCCAGAGCGATGAAGAGCTGTATCAAATCATTACGGATACCGAAGGTACTCCGGATGAAGCGTAGTTATTCGGTAATGTCTCTTTTAGACGTtgt                                                                                                            >  1:4765962/1‑140 (MQ=255)

                             gcaaCGTCTGGCGGACAAACCCATCTGCCGCCGTTTACGCGCAGCCCAGCGCGATGAAGAGCTGTATCAACTCATTACGGATACCGAAGGTACTCCGGATGAAGCGTAGTTATTCGGTACTGTCTCTTTTAGACGTtgtg                                                                                                           <  1:5271389/138‑1 (MQ=255)

                             gacaCGTCTGGCGGACAAAACCATCTGCCGCCGTTTACGCGCAGCCCAGAGCGATGAAGAGCTGTATCAAATCATTACGGATACCGAAGGTACTCCGGATGAAGCGTAGTTATTCGGTAATGTCTCTTTTAGACGTtgtg                                                                                                           <  1:9165985/137‑1 (MQ=255)

                                  gTCTGGCGGACAAAACCATCTGCCGCCGTTTACGCGCAGCCCAGAGCGATGAAGAGCTGTATCAAATCATTACGGATACCGAAGGTACTCCGGATGAAGCGTAGTTATTCGGTAATGTCTCTTTTAGACGTTGTgaggag                                                                                                      >  1:8903162/1‑140 (MQ=255)

                                    cTGGCGGACACAACCATCTGCCGCCGTTTACGCGCAGCCCAGAGCGATGAAGAGCTGTATCAAATCATTACGGCTACCGAAGGTACTCCGGATGAAGCGTAGTTATTCGGTAATGTCTCTTTTAGACGTTGTGAGGAGaa                                                                                                    <  1:11098565/140‑1 (MQ=255)

                                     tGGCGGACAAAACCATCTGCCGCCGTTTACGCGCAGCCCAGAGCGAGGAAGAGCTGTATCAAATCATTACGGATACCGAAGGTACTCCGGATGAAGCGTAGTTATTCGGTAATGTCTCTTTTAGACGTTGTGAGGAGaaa                                                                                                   <  2:1983175/140‑1 (MQ=255)

                                       gCGGACAAACCCATCTGCCGCCGTTTACGCGCAGCCCCGAGCGCTGAAGAGCTGTATCAAATCCTTACGGATACCGAAGGTACTCCGGATGAAGCGGAGTTATTCGGTAATGTCACTTTTAGACGTTGTGAGGAGAAACa                                                                                                 <  2:10171202/140‑1 (MQ=255)

                                       gCGGACAAAACCATCTGCCGCCGTTTACGCGCAGCCCAGAGCGATGAAGAGCTGTATCAAATCATTACGGATACCGAAGGTACTCCGGATGAAGCGTAGTTATTCGGTAATGTCTCTTTTAGACGTTGTGAGGAGAAACa                                                                                                 <  1:11390738/140‑1 (MQ=255)

                                       gCGGACAAAACCATCTGCCGCCGTTTACGCGCAGCCCAGAGCGATGAAGAGCTGTATCAAATCATTACGGATACCGAAGGTACTCCGGATGAAGCGTAGTTATTCGGTAATGTCTCTTTTAGACGTTGTGAGGAGAAACa                                                                                                 <  2:9215163/140‑1 (MQ=255)

                                       gCGGACAAAACCATCTGCCGCCGTTTACGCGCAGCCCAGAGCGATGAAGAGCTGTATCAAATCATTACGGATACCGAAGGTACTCCGGATGAAGCGTAGTTATTCGGTAATGTCTCTTTTAGACGTTGTGAGGAGAAACa                                                                                                 <  2:10611679/140‑1 (MQ=255)

                                       gCGGACAAAACCATCTGCCGCCGTTTACGCGCAGCCCAGAGCGATGAAGAGCTGTATCAAATCATTACGGATACCGAAGGTACTCCGGATGAAGCGTAGTTATTCGGTAATGTCTCTTTTAGACGTTGTGAGGAGAAACa                                                                                                 <  1:6083056/140‑1 (MQ=255)

                                       gCGGACAAAACCATCTGCCGCCGTTTACGCGCAGCCCAGAGCGATGAAGAGCCGTATCAAATCATTACGGATACCGAAGGTACTCCGGATGAAGCGTAGTTATTCGGTAATGTCTCTTTTAGACGTTGTGAGGAGAAACa                                                                                                 <  1:3011085/140‑1 (MQ=255)

                                            cacaaCCATCTGCCGCCCTGTACGCGCAGCCCAGAGCGATGAAGAGCTGTATCAAATCATTACGGATACCGAAGGTACTCCTGATGAAGCGTAGTTATTCGGTAATGTCTCTTTTAGACGTTGTGAGGAGAAACAGTACa                                                                                            <  2:8747280/137‑1 (MQ=255)

                                            cAAAACCATCTGCCGCCGTTTACGCGCAGCCCAGAGCGATGAAGAGCTGTATCAACTCATGACGGATACCGAAGGTACTCCGGATGAAGCGTAGTTATTCGGTAATGTCTCTTTTAGACGTTGTGAGGAGAAACAGTACa                                                                                            <  1:6694390/140‑1 (MQ=255)

                                            cAAAACCATCTGCCGCCGTTTACGCGCAGCCCAGAGCGATGAAGAGCTGTATCAAATCATTACGGATACCGAAGGTACTCCGGATGAAGCGTAGTTATTCGGTAATGTCTCTTTTAGACGTTGTGAGGAGAAACAGTACa                                                                                            <  1:7118558/140‑1 (MQ=255)

                                            cAAAACCATCTGCCGCCGTTTACGCGCAGCCCAGAGCGATGAAGAGCTGTATCAAATCATTACGGATACCGAAGGTACTCCGGATGAAGCGTAGTTATTCGGTAATGTCTCTTTTAGACGTTGTGAGGAGAAACAGTACa                                                                                            <  1:7953304/140‑1 (MQ=255)

                                            cAAAACCATCTGCCGCCGTTTACGCGCAGCCCAGAGCGATGAAGAGCTGTATCAAATCATTACGGATACCGAAGGTACTCCGGATGAAGCGTAGTTATTCGGTAATGTCTCTTTTAGACGTTGTGAGGAGAAACAGTACa                                                                                            <  1:2830887/140‑1 (MQ=255)

                                            cAAAACCATCTGCCGCCGTTTACGCGCAGCCCAGAGCGATGAAGAGCTGTATCAAATCATTACGGATACCGAAGGTACTCCGGATGAAGCGTAGTTATTCGGTAATGTCTCTTTTAGACGTTGTGAGGAGAAACAGTACa                                                                                            <  2:4211670/140‑1 (MQ=255)

                                            cAAAACCATCTGCCGCCGTTTACGCGCAGCCCAGAGCGATGAAGAGCTGTATCAAATCATTACGGATACCGAAGGTACTCCGGATGAAGCGTAGTTATTCGGTAATGTCTCTTTTAGACGTTGTGAGGAGAAACAGTACa                                                                                            <  1:3656988/140‑1 (MQ=255)

                                            cAAAACCATCTGCCGCCGTTTACGCGCAGCCCAGAGCGATGAAGAGCTGTATCAAATCATTACGGATACCGAAGGTACTCCGGATGAAGCGTAGTTATTCGGTAATGTCTCTTTTAGACGTTGTGAGGAGAAACAGTACa                                                                                            <  1:1305877/140‑1 (MQ=255)

                                            cAAAACCATCTGCCGCCGTTTACGCGCAGCCCAGAGCGATGAAGAGCTGTATCAAATCATGACGGATACCGAAGGTACTCCGGATGAAGCGTAGTTATTCGGTAATGTCTCTTTTAGACGTTGTGAGGAGAAACAGTACa                                                                                            <  1:3757106/140‑1 (MQ=255)

                                             aaaaCCATCTGCCGCCGTTTACGCGCAGCCCAGAGCGATGAAGAGCTGTATCAAATCATTACGGATACCGAAGGTACTCCGGATGAAGCGTAGTTATTCGGTAATGTCTCTTTTAGACGTTGTGAGGAGAAACAGTACAt                                                                                           >  1:3489830/1‑140 (MQ=255)

                                                  cATCTTCCGCCGTTTACGCGCAGCCCAGAGCGATGAAGAGCTGTATCAAATCATTACGGATACCGAAGGTACTCCGGATGAAGCGTAGTTATTCGGTAATGTCTCTTTTAGACGTTGTGAGGAGAAACAGTACATGGTAc                                                                                      <  1:6186833/140‑1 (MQ=255)

                                                  cATCTGCCGCCGTTTACGCGCAGCCCAGAGCGATGAAGAGCTGTATCAAATCATTACGGATACCGAAGGTACTCCGGATGAAGCGTAGTTATTCGGTAATGTCTCTTTTCGACGTTGTGAGGAGAAACAGTACATGGTAc                                                                                      <  1:6588191/140‑1 (MQ=255)

                                                  cATCTGCCGCCGTTTACGCGCAGCCCAGAGCGATGAAGAGCTGTATCAAATCATTACGGATACCGAAGGTACTCCGGATGAAGCGTAGTTATTCGGTAATGTCTCTTTTAGACGTTGTGAGGAGAAACAGTACATGGTAc                                                                                      <  2:10478600/140‑1 (MQ=255)

                                                       gccgccGTTTACGCGCAGCCCAGAGCGATGAAGAGCTGTATCAAATCATTACGGATACCGAAGGTACTCCGGATGAAGCGTAGTTATTCGTTAATGTCTCTTTTAGACGTTGTGAGGAGAAACAGTACATGGTACtgatg                                                                                 <  2:10831508/140‑1 (MQ=255)

                                                        ccgccgTTTACGCGCAGCCCAGAGCGATGAAGAGCTGTATCAAATCATGACGGATACCGAAGGTACTCCGGATGAAGCGTAGTTATTCGGTAATGTCTCTTTTAGACGTTGTGAGGAGAAACAGTACATGGTACtgatga                                                                                <  2:7582933/140‑1 (MQ=255)

                                                         cgccgTTTACGCGCAGCCCAGAGCGATGAAGAGCTGTATCAAATCATGACGGAGACCGAAGGTACTCCGGATGAAGCGTAGTTATTCGGTAATGTCTCTTTTAGACGTTGTGAGGAGAAACAGTACATGGTACTgatgat                                                                               <  2:7371312/140‑1 (MQ=255)

                                                                tACGCGCAGCCCAGATCGATGAAGAGCTGTATCAAATCATTACGGATACCGAAGGTACTCCGGATGAAGCGTAGTTATTCGGTAATGTCTCTTTTAGACGTTGTGAGGAGAAACAGTACATGGTACTTATGATCGTCAGc                                                                        <  2:8292671/140‑1 (MQ=255)

                                                                      cAGCCCAGAGCGATGAAGAGCTGTATCAAATCATTACTGATACCGAAGGTACTCCGGATGAAGCGTAGTAATTCGGTAATGACTCTTTTAGACGTTGTGAGGAGAAACAGTACATTGTACTGATGATCGTCAGCGGACgt                                                                  >  2:11005590/1‑140 (MQ=255)

                                                                       aGCCCAGAGCGATGAAGAGCTGTATCAAATCATTACGGATACCGAAGGTACTCCGGATGAAGCGTAGTTATTCGGTAATGTCTCTTTTAGACGTTGTGAGGAGAAACAGTACATGGTACTGATGATCGTCAGCGGACgtt                                                                 <  2:158168/140‑1 (MQ=255)

                                                                        gCCCAGAGCGATGAAGAGCTGTATCAAATGATTACGGATACCGAAGGTACTCCGGATGAAGGGTAGTTATTCGGTAATGTCTCTTTTAGACGTTGTGAGGAGAAACTGTACTTGGTACTGATGATCGTCAGCGGACgttc                                                                >  2:7091429/1‑140 (MQ=255)

                                                                        gCCCAGAGCGATGAAGAGCTGTATCAAATCATTACGGATACCGAAGGTACTCCGGATGAAGCGTAGTTATTCGGTAATGTCTCTTTTAGACGTTGTGAGGAGAAACAGTACATGGTACTGATGATCGTCAGCGGACgttc                                                                >  2:1815053/1‑140 (MQ=255)

                                                                        gCCCAGAGCGATGAAGAGCTGTATCAAATCATTACGGATACCGAAGGTACTCCGGATGAAGCGTAGTTATTCGGTAATGTCTCTTTTAGACGTTGTGAGGAGAAACAGTACATGGTACTGATGATCGTCAGCGGACgttc                                                                <  1:2085477/140‑1 (MQ=255)

                                                                            agagCGATGAAGAGCTGTATCAAATCATTACGGATACCGAAGGTACTCCGGAGGAAGCGTAGTTATTCGGTAAGGTCTCTTTTAGACGTTGTGAGGAGAAACAGTACATGGTACTGATGATCGTCAGCGGACgttcaggt                                                            <  2:9315307/140‑1 (MQ=255)

                                                                              agCGATGAAGAGCTGTATCAAATCATTACGGATACCGAAGGTACTCCGGATGAAGCGTAGTTATTCGGTAATGTCTCTTTTAGACGTTGTGAGGAGAAACAGTACATGGTACTGATGATCGTCAGAGGACgttcaggttc                                                          >  2:5164584/1‑140 (MQ=255)

                                                                                  aTGAAGAGCTGTATCAAATCATTACGGATACCGAAGGTACTCCGGATGAAGCGTAGTTATTCGGTAATGTCTCTTTTAGACGTTGTGAGGAGAAACAGTACATGGTACTGATGATCGTCAGCGGACGTtcaggttcaggt                                                      <  1:5857606/140‑1 (MQ=255)

                                                                                   tGAAGAGCTGTATCAAATCATTACGGATACCGAAGGTACTCCGGATGAAGCGTAGTTCTTCGGTAATGTCTCTTTTAGACGGTGTGAGGAGAAACAGTACATGGTACTGATGATCGTCAGCGGACGTTCAGGTTCAGGTa                                                     >  1:2514817/1‑140 (MQ=255)

                                                                                   tGAAGAGCTGTATCAAATCATTACGGATACCGAAGGTACTCCGGATGAAGCGTAGTTATTCGGTAATGTCTCTTTTAGACGTTGTGAGGAGAAACAGTACATGGTACTGATGATCGTCAGCGGCCGTTCAGGTTCAGGTa                                                     >  1:9685180/1‑140 (MQ=255)

                                                                                   tGAAGAGCTGTATCAAATCATTACGGATACCGAAGGTACTCCGGATGAAGCGTAGTTATTCGGTAATGTCTCTTTTAGACGTTGTGAGGAGAAACAGTACATGGTACTGATGATCGTCAGCGGACGTTCAGGTTCAGTTa                                                     >  2:3107138/1‑140 (MQ=255)

                                                                                   tGAAGAGCTGTATCAAATCATTACGGATACCGAAGGTACTCCGGATGAAGCGTAGTTATTCGGTAATGTCTCTTTTAGACGTTGTGAGGAGAAACAGTACATGGTACTGATGATCGTCAGCGGACGTTCAGGTTCAGGTa                                                     >  1:1782243/1‑140 (MQ=255)

                                                                                   tGAAGAGCTGTATCAAATCATTACGGATACCGAAGGTACTCCGGATGAAGCGTAGTTATTCGGTAATGTCTCTTTTAGACGTTGTGAGGAGAAACAGTACATGGTACTGATGATCGTCAGCGGACGTTCAGGTTCAGGTa                                                     >  1:1678793/1‑140 (MQ=255)

                                                                                   tGAAGAGCTGTATCAAATCATTACGGATACCGAAGGTACTCCGGATGAAGCGTAGTTATTCGGTAATGTCTCTTTTAGACGTTGTGAGGAGAAACAGTACATGGTACTGATGATCGTCAGCGGACGTTCAGGTTCAGGTa                                                     >  2:6143419/1‑140 (MQ=255)

                                                                                   tGAAGAGCTGTATCAAATCATTACGGATACCGAAGGTACTCCGGATGAAGCGTAGTTATTCGGTAATGTCTCTTTTAGACGTTGTGAGGAGAAACAGTACATGGTACTGATGATCGTCAGCGGACGTTCAGGTTCAGGTa                                                     >  2:5597047/1‑140 (MQ=255)

                                                                                   tGAAGAGCTGTATCAAATCATTACGGATACCGAAGGTACTCCGGATGAAGCGTAGTTATTCGGTAATGTCTCTTTTAGACGTGGTGAGGAGAAACAGTACATGGTACTGATGATCGTCAGCGGACGTTCAGGGTCAGGTa                                                     >  2:7820701/1‑140 (MQ=255)

                                                                                    gAAGAGCTGTATCAAATCATTACGGATACCGAAGGTACTCCGGATGAAGCGTAGTTATTCGGTAATGTCTCTTTTAGACGTTGTGAGGAGAAACAGTACATGGTACTGATGATCGTCAGCGGACGTTCAGGTTCAGGTaa                                                    <  2:900284/140‑1 (MQ=255)

                                                                                    gAAGAGCTGTATCAAATCATTACGGATACCGAAGGTACTCCGGATGAAGCGTAGTTATTCGGTAATGTCTCTTTTAGACGTTGTGAGGAGAAACAGTACATGGTACTGATGATCGTCAGCGGACGTTCAGGTTCAGGTaa                                                    <  1:1023115/140‑1 (MQ=255)

                                                                                    gAAGAGCTGTATCAAATCATGACGGATACCGAAGGTACTCCGGATGAAGCGTAGTTATTCGGTAATGTCTCTTTTAGACGTTGTGAGGAGAAACAGTACATGGTACTGATGATCGTCAGCGGACGTTCAGGTTCAGGGaa                                                    <  2:847629/140‑1 (MQ=255)

                                                                                        agCTGTATCAAATCATTACGGATACCGAAGGTACTCCGGATGAAGCGTAGTTATTCGGTAATGTCTCTTTTAGACGTTGTGAGGAGAAACAGTACa                                                                                            <  2:4951395/96‑1 (MQ=255)

                                                                                        agCTGTATCAAATCATTACGGATACCGAAGGTACTCCGGATGAAGCGTAGTTATTCGGTAATGTCTCTTTTAGACGTTGTGAGGAGAAACAGTACa                                                                                            >  1:4950895/1‑96 (MQ=255)

                                                                                        agCTGTATCAAATCATTACGGATACCGAAGGTACTCCGGATGAAGCGTAGTTATTCGGTAATGTCTCTTTTAGACGTTGTGAGGAGAAACAGTACATGGTACTGATGATCGTCAGCGGACGTTCAGGTTCAGGTAAATCt                                                >  1:4495043/1‑140 (MQ=255)

                                                                                        agCTGTATCAAATCATTACGGATACCGAAGGTACTCCGGATGAAGCGTAGTTATTCGGTAATGTCTCTTTTAGACGTTGTGAGGAGAAACAGTACATGGTACTGATGATCGTCAGCGGACGTTCAGGTTCAGGTAAATCt                                                >  1:1519917/1‑140 (MQ=255)

                                                                                         gCTGTATCAAATCATTACGGATACCGAAGGTACTCCGGATGAAGCGTAGTTATTCGGTAATGt                                                                                                                            >  1:4351826/1‑63 (MQ=255)

                                                                                          cTGTATCAAATCATTACGGATACCGAAGGTACTCCGGATGAAGCGTAGTTATTCGGTAATGTCTCTTTTAGACGTTGTGAGGAGAAACAGTACATGGTACTGATGATCGTCAGCGGACGTTCAGGTTCAGGTAAATCTGt                                              >  1:3293800/1‑140 (MQ=255)

                                                                                             tATCAAATCATTACGGATACCGAAGGTACTCCGGATGAAGCGTAGTTATTCGGTAATGtc                                                                                                                           <  2:10006423/60‑1 (MQ=255)

                                                                                             tATCAAATCATTACGGATACCGAAGGTACTCCGGATGAAGCGTAGTTATTCGGTAATGtc                                                                                                                           >  1:10006305/1‑60 (MQ=255)

                                                                                             tATCAAATCATTACGGATACCGAAGGTACTCCGGATGAAGCGTAGTTATTCGGTAATGTCTCTTTTAGACGTTGTGAGGAGAAACAGTACATGGTACTGATGATCGTCAGCGGACGTTCAGGTTCAGGTAAATCTGTCGc                                           >  1:5456266/1‑140 (MQ=255)

                                                                                               tCAAATCATTACGGATACCGAAGGTACTCCGGATGAAGCGTAGTTATTCGGTAATGTCTCTTTTAGACGTTGTGAGGAGAAACAGTACa                                                                                            <  2:11240741/89‑1 (MQ=255)

                                                                                               tCAAATCATTACGGATACCGAAGGTACTCCGGATGAAGCGTAGTTATTCGGTAATGTCTCTTTTAGACGTTGTGAGGAGAAACAGTACATGGTACTGATGATCGTCAGCGGACGTTCAGGTTCAGGTAAATCTGTCGccc                                         >  2:10261630/1‑140 (MQ=255)

                                                                                                   aTCATTACGGATACCGAAGGTACTCCGGATGAAGCGTAGTTATTCGGTAATGTCTCTTTTAGACGTTGTGAGGAGAAACAGTACATGGTACTGATGATCGTCAGCGGACGTTCAGGTTCAGGTAAATCTGTCGCCCtgcg                                     <  1:10074710/140‑1 (MQ=255)

                                                                                                       ttACGGATACCGAAGGTACTCCGGATGAAGCGTAGTTATTCGGTAATGTCTCTTTTAGACGTTGTGAGGAGAAACAGTACATGGTACTGATGATCGTCAGCGGACGTTCAGGTTCAGGTAAATCTGTCGCCCtgcgtgcg                                 >  2:697284/1‑140 (MQ=255)

                                                                                                        tACGGATACCGAAGGTACTCCGGATGAAGCGTAGTTATTCGGTAATGTCTCTTTTAGACGTTGTGAGGAGAAACAGTACATGGTACTGATGATCGTCAGCGGACGTTCAGGTTCAGGTAAATCTGTCGCCCTGCGTgcgc                                <  2:5825908/140‑1 (MQ=255)

                                                                                                          cGGATACCGAAGGTACTCCGGATGAAGCGTAGTTATTCGGTAATGTCTCTTTTAGACGTTGTGAGGAGAAACAGTACATGGTACTGATGATCGTCAGCGGACGTTCTGGTTCAGGTAAATCTGTCGCCCTGCGTGCGCTg                              <  2:1189785/140‑1 (MQ=255)

                                                                                                                 cGAAGGTACTCCTGATGATGCGTAGTTTTTCGGTAATGTCTCTTTTAGACGTTGTGAGGAGAAACAGTACTTGGTACTGATGATCGTCAGCGGACGTTCAGGTTCAGGTAAATCTGTCGCCCTGCGTTCGCTGGAAGatt                       <  2:459695/140‑2 (MQ=255)

                                                                                                                 cGAAGGTACTCCGGATGAAGCGTAGTTATTCGGTAATGTCTCTTTTAGACGTTGTGCGGAGAAACAGTACATGGTACTGATGATCGTCAGCGGACGTTCAGGTTCAGGTAAATCTGTCGCCCTGCGTGCGCTGGAAGata                       <  1:7496198/140‑1 (MQ=255)

                                                                                                                 cGAAGGTACTCCGGATGAAGCGTAGTTATTCGGTAATGTCTCTTTTAGACGTTGTGAGGAGAAACAGTACATGGTACTGATGATCGTCAGCGGACGTTCAGGTTCAGGTAAATCTGTCGCCCTGCGTGCGCTGGAAGata                       >  2:3278137/1‑140 (MQ=255)

                                                                                                                 cGAAGGTACTCCGGATGAAGCGTAGTTATTCGGTAATGTCTCTTTTAGACGTTGTGAGGAGAAACAGTACATGGTACTGATGATCGTCAGCGGACGTTCAGGTTCAGGTAAATCTGTCGCCCTGCGTGCGCTGGAAGata                       <  2:648336/140‑1 (MQ=255)

                                                                                                                 cGAAGGTACTCCGGATGAAGCGTAGGTATTCGGTAATGTCTCTTATAGACGTTGTGAGGAGAAACAGTACATGGTACTGATGATCGTCAGCGGACGTTCAGGTTCAGGTAAATCTGTCGCCCTGCGTGCGCTGGAAGata                       <  1:3973965/140‑1 (MQ=255)

                                                                                                                     ggTACTCCGGATGAAGCGTAGTTATTCGGTAATGTCTCTTTTAGACGTTGTGAGGAGAAACAGTACATGGTACTGATGATCGTCAGCGGACGTTCAGGTTCAGGTAAATCTGTCGCCCTGCGTGCGCTGGAAGATATggg                   >  1:2356166/1‑140 (MQ=255)

                                                                                                                       tACTCCGGATGAAGCGTAGTTATTCGGTAATGTCTCTTTTAGACGTTGTGAGgaga                                                                                                     >  1:7807606/1‑56 (MQ=255)

                                                                                                                       tACTCCGGATGAAGCGTAGTTATTCGGTAATGTCTCTTTTAGACGTTGTGAGGAGAAACAGTACATGGTACTGATGATCGTCAGCGGACGTTCAGGTTCAGGTAAATCTGTCGCCCTGCGTGCGCTGGAAGATATGGGtt                 >  2:2427546/1‑140 (MQ=255)

                                                                                                                       tACTCCGGATGAAGCGTAGTTATTCGGTAATGTCTCTTTTAGACGTTGTGAGGAGAAACAGTACATGGTACTGATGATCGTCAGCGGACGTTCAGGTTCAGGTAAATCTGTCGCCCTGCGTGCGCTGGAAGATATGGGtt                 >  1:7021133/1‑140 (MQ=255)

                                                                                                                        aCTCCGGATGAAGCGGAGTTCTTCGGTAATGTCTCTTTTAGACGTTGGGAGGAGAAACAGTACATGGTACTGATGATCGTCAGCGGACGTTCAGGTTCAGGTAACTCTGTCGCCCTGCGTGCGCTGGAAGATATGGGttt                >  1:7730321/1‑140 (MQ=255)

                                                                                                                           ccGGATGAAGCGTAGTTATTCTGTAATGTCTCTTTTAGACGTTGTGAGGAGAAACAGTACATGGTACTGATGATCGTCAGCGGACGTTCAGGTTCAGGTAAATCTGTCGCCCTGCGTGCTCTGGAAGATATGGGTTTTTa             <  1:8394822/140‑1 (MQ=255)

                                                                                                                            cGGATGAAGCGTAGTTATTCGGTAATGTCTCTTTTAGACGTTGTGAGGAGAAACAGTACATGGTACTGATGATCGTCAGCGGACGTTCAGGTTCAGGTAAATCTGTCGCCCTGCGTGCGCTGGAAGATATGGGTTTTTAc            >  1:10484081/1‑140 (MQ=255)

                                                                                                                              gATGAAGCGTAGTTATTCGGTAATGTCTCTTTTAGACGTTGTGAGGAGAAACAGTACATGGTACTGATGATCGTCAGCGGACGTTCAGGTTCAGGTAAATCTGTCGCCCTGCGTGCGCTGGAAGATATGGGTTTTTACTg          <  1:8108839/140‑1 (MQ=255)

                                                                                                                                tGAAGCGTAGTTATTCGGTAATGTCTCTTTTAGACGTTGTGAGGAGAACCAGTACATGGTACTGATGATCGTCAGCGGACGTTCAGGTTCAGGTAAATCTGTCGCCCTGCGTGCGCTGGAAGATATGGGTTTTTACTGCg        <  2:5756302/140‑1 (MQ=255)

                                                                                                                                 gAAGCGTAGTTATTCGGTAATGTCTCTTTTAGACGTTGTGAGGAGAAACAGTACa                                                                                            >  2:6037065/1‑55 (MQ=255)

                                                                                                                                 gAAGCGTAGTTATTCGGTAATGTCTCTTTTAGACGTTGTGAGGAGAAACAGTACATGGTACTGATGATCGTCAGCGGACGTTCAGGTTCAGGTAAATCTGTCGCCCTGCGTGCGCTGGAAGATATGGGTTTTTACTGCGt       >  2:9671607/1‑140 (MQ=255)

                                                                                                                                   aGCGTAGTTATTCGGTAATGTCTCTTTTAGACGTTGTGAGGAGAAACAGTACATGGTACTGATGATCGTCAGCGGACGTTCAGGTTCAGGTAAATCTGTCGCCCTGCGTGCGCTGGAAGATATGGGTTTTTACTGCGTgg     >  1:9454033/1‑140 (MQ=255)

                                                                                                                                     cGTAGTTATTCGGTAATGTCTCTTTTAGACGTTGTGAGGAGAAACAGTACATGGTACTGATGATCGTCAGCGGACGTTCAGGTTCAGGTAAATCTGTCGCCCTGCGTGCGCTGGAAGATATGGGTTTTTACTGCGTGGAt   <  1:884908/140‑1 (MQ=255)

                                                                                                                                     cGTAGTTATTCGGTAATGTCTCTTTTAGACGTTGTGAGGAGAAACAGTACATGGTACTGATGATCGTCAGCGGACGTTCAGGTTCAGGTAAATCTGTCGCCCTGCGTGCGCTGGAAGATATGGGTTTTTACTGCGTGGAt   <  2:451890/140‑1 (MQ=255)

ACGCACCTGCATACTCTGTCGCTGGTGGCGAAACGTCTGGCGGACAAAACCATCTGCCGCCGTTTACGCGCAGCCCAGAGCGATGAAGAGCTGTATCAAATCATTACGGATACCGAAGGTACTCCGGATGAAGCGTAATTATTCGGTAATGTCTCTTTTAGACGTTGTGAGGAGAAACAGTACATGGTACTGATGATCGTCAGCGGACGTTCAGGTTCAGGTAAATCTGTCGCCCTGCGTGCGCTGGAAGATATGGGTTTTTACTGCGTGGATA  >  NZ_CP025268/3347617‑3347890

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`