| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 1,826,683 | (A)7→8 | intergenic (‑247/+51) | chbB ← / ← osmE | PTS N,N'‑diacetylchitobiose transporter subunit IIB/osmotically‑inducible lipoprotein OsmE |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 1,826,676 | 1 | . | A | 96.8% | 3610.5 / 84.4 | 958 | intergenic (‑240/+58) | chbB/osmE | PTS N,N'‑diacetylchitobiose transporter subunit IIB/osmotically‑inducible lipoprotein OsmE |
| Reads supporting (aligned to +/- strand): ref base . (21/10); new base A (551/376); total (572/386) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.57e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 974 total aligned reads displayed.
TGGCTGAAAGGAGTATACGGTATAGACCTGAGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑CC‑AAA‑AAAACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCTGATAACCGGAGTTGATGACATGTCCGGTATCAT > NZ_CP025268/1826539‑1826810 | gCTGAAAGGAGTATACGGTATAGACCTGAGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑CC‑aaa‑a > 1:6959753/1‑140 (MQ=255) gAAAGGAGTATACGGTATAGACCTGAGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑CC‑aaa‑aaaa > 1:977525/1‑140 (MQ=255) aCGGTATAGACCTGAGCAATAGTATTTCTTTGACCTTATAAATTGTGTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGTTAATTAAGAACTCAGG‑CCAAAA‑AAAACCGGCGCAAt > 1:2297804/1‑140 (MQ=255) tataGACCTGAGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑CCAAAA‑AAAACCGGCGCACTGGcc > 2:3792351/1‑140 (MQ=255) tataGACCTGAGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑CCAAAA‑AAAACCGGCGCAATGGcc > 1:4163374/1‑140 (MQ=255) tataGACCTGAGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑CCAAAA‑AAAACCGGCGCAATGGcc > 2:4853935/1‑140 (MQ=255) ataGACCTGAGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑CCAAAA‑AAAACCGGCGCAATGGCCg > 1:7841046/1‑140 (MQ=255) ataGACCTGAGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑CCAAAA‑AAAACCGGCGCAATGGCCg > 1:6246326/1‑140 (MQ=255) aGACCTGAGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACTGGTCGGGCAAATAATTCTCTAAGATAATTAAGAACTCAGG‑CCAAAA‑AAAACCGGCGCTAGGGCgggg > 2:8590026/1‑139 (MQ=255) aGACCTGAGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑CCAAAA‑AAAACCGGCGCAATGGCCGGt > 1:276850/1‑140 (MQ=255) aCCTGAGCAATAGTATTTCTTTTACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGTACTCAGG‑CC‑AAATAAAACCGGCGCGATGGCCGGttt > 1:8724177/1‑140 (MQ=255) aCCTGAGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑CCAAAA‑AAAACCGGCGCAATGGCCGGttt > 2:5907413/1‑140 (MQ=255) aCCTGAGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑CCAAAA‑AAAACCGGCGCAATGGCCGGttt > 1:604062/1‑140 (MQ=255) aCCTGAGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTACACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑CCAAAA‑AAAACCGGCGCAATGGCCGGttt > 1:8110611/1‑140 (MQ=255) gAGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑CCAAAA‑AAAACCGGCGCAATGGCCGGTTTCCgt > 1:6809165/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAATTAATTCGCGAAGATAATTAAGAACTCAGG‑CCAAAA‑AAAACCGGCGCAATGGCCGGTTTCCgtt > 1:2175932/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGACGATAATTAAGAACTCAGGCCC‑AAA‑AAAACCGGCGCAATGGCCGGTTTCCgtt > 1:8366903/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑CCAAAA‑AAAACCGGCGCACTGGCCGGTTTCCgtg > 1:3182669/1‑139 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑CCAAAA‑AAAACCGGCGCAATGGCCGGTTTCCgtt > 2:3649210/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑CCAAAA‑AAAACCGGCGCAATGGCCGGTTTCCgtt > 1:573842/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑CCAAAA‑AAAACCGGCGCAATGGCCGGTTTCCgtt > 2:9744017/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑CCAAAA‑AAAACCGGCGCAATGGCCGGTTTCCgtt > 1:1895378/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑CCAAAA‑AAAACCGGCGCAATGGCCGGTTTCCgtt > 2:8184317/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑CCAAAA‑AAAACCGGCGCAATGGCCGGTTTCCgtt > 2:7856980/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑CCAAAA‑AAAACCGGCGCAATGGCCGGTTTCCgtt > 1:3335364/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑CC‑aaa‑aaaaacc > 2:500095/1‑115 (MQ=255) tAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAGTTAAGAACTCAGG‑CCAAAA‑AAAACCGGCGCAATGGCCGGTGTCCGTTGTTAc > 1:5888878/1‑140 (MQ=255) tAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑CCAAAA‑AAAACCGGCGCAATGGCCGGTTTCCGTTGTTAc > 2:3342276/1‑140 (MQ=255) gTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑CCAAAA‑AAAACCGGCGCAATGGCCGGTTTCCGTTGTTACTc < 1:1616739/140‑1 (MQ=255) gTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑CCAAAA‑AAAACCGGCGCAATGGCCGGTTTCCGTTGTTACTc > 1:3443987/1‑140 (MQ=255) gTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑CCAAAA‑AAAACCGGCGCAATGGCCGGTTTCCGTTGTTACTc < 1:4855849/140‑1 (MQ=255) tCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑CCAAAA‑AAAACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCt > 2:186267/1‑140 (MQ=255) cTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑CCAAAA‑AAAACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCtt > 1:5267562/1‑140 (MQ=255) aCCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑CCAAAA‑AAAACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGa > 1:10222963/1‑140 (MQ=255) ataAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑CCAAAA‑AAAACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAAt > 2:7976772/1‑140 (MQ=255) ataAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑CCAAAA‑AAAACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAAt > 2:10162987/1‑140 (MQ=255) ataAATTGTTTCTCCTTGACCTGTGGTTATGACCCTATTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑CCAAAA‑AAAACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAAt > 1:1751764/1‑140 (MQ=255) aaTTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑CC‑AAA‑AAAACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGAt < 2:5201700/140‑1 (MQ=255) ttGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑CCAAAA‑AAAACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGAtt < 2:1729587/140‑1 (MQ=255) ttGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑CCAAAA‑AAAACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGAtt > 2:10811372/1‑140 (MQ=255) tctcCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑CCAAAA‑AAAACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTAGTTc > 1:9010991/1‑140 (MQ=255) tctcCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑CCAAAA‑AAAACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTc > 2:6878854/1‑140 (MQ=255) ctcCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑CCAAAA‑AAAACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCg < 2:8919043/140‑1 (MQ=255) ctcCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑CCAAAA‑AAAACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCg < 1:8563134/140‑1 (MQ=255) ccTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑CCAAAA‑AAAACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCa < 2:7694876/140‑1 (MQ=255) ccTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑CCAAAA‑AAAACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCa < 2:2505286/140‑1 (MQ=255) ccTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑CCAAAA‑AAAACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCa < 1:10649140/140‑1 (MQ=255) cTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑CCAAAA‑AAAACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAg > 1:10001608/1‑140 (MQ=255) gtgGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑CCAAAA‑AAAACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCg < 1:1260237/129‑1 (MQ=255) gtgGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑CCAAAA‑AAAACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGa > 2:2070351/1‑140 (MQ=255) gtgGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑CCAAAA‑AAAACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCGGTGGa > 1:5566564/1‑140 (MQ=255) tgGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑CCAAAA‑AAAACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGAt < 1:10514268/140‑1 (MQ=255) tgGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑CCAAAA‑AAAACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGAt < 2:7007702/140‑1 (MQ=255) tgGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑CCAAAA‑AAAACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGAt > 1:4392912/1‑140 (MQ=255) tgGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑CCAAAA‑AAAACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGAt < 1:3656110/140‑1 (MQ=255) tgGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑CCAAAA‑AAAACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGAt > 2:10651771/1‑140 (MQ=255) aTGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑CCAAAA‑AAAACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGACTTGATTACTTCGCAGCCGGTGGATCAgtg > 1:8874875/1‑140 (MQ=255) aTGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑CCAAAA‑AAAACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCg < 1:9686547/123‑1 (MQ=255) tGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑CCAAAA‑AAAACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGATTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAgtgt > 2:7357837/1‑140 (MQ=255) gACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑CCAAAA‑AAAACCGGCGCTATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTc < 2:9437171/140‑1 (MQ=255) gACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑CCAAAA‑AAAACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTc < 1:10095867/140‑1 (MQ=255) ccTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑CCAAAA‑AAAACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAgtg > 2:4364772/1‑135 (MQ=255) ccTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑CCAAAA‑AAAACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTa > 2:4606602/1‑140 (MQ=255) ccTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑CCAAAA‑AAAACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTa > 1:3031753/1‑140 (MQ=255) tctTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑CCAAAA‑AAAACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTAtt > 1:3817209/1‑140 (MQ=255) ctTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑CCAAAA‑AAAACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGAt < 2:9170286/127‑1 (MQ=255) ctTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑CCAAAA‑AAAACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTc > 2:1204343/1‑140 (MQ=255) ctTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑CCAAAA‑AAAACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTc > 1:9425736/1‑140 (MQ=255) acaTTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑CCAAAA‑AAAACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGca < 1:2408643/140‑1 (MQ=255) acaTTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑CCAAAA‑AAAACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGca < 2:7246222/140‑1 (MQ=255) acaTTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑CCAAAA‑AAAACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGca < 2:6246326/140‑1 (MQ=255) aTTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑CCAAAA‑AAAACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGcaca < 1:5084638/140‑1 (MQ=255) tttCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑CCAAAA‑AAAACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCttt < 2:10507313/88‑1 (MQ=255) tttCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑CCAAAA‑AAAACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAg > 2:2348329/1‑140 (MQ=255) tttCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑CCAAAA‑AAAACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAg > 2:3489982/1‑140 (MQ=255) tttCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑CCAAAA‑AAAACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAg > 2:10300183/1‑140 (MQ=255) tCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑CCAAAA‑AAAACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGt > 2:3003349/1‑140 (MQ=255) cGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑CCAAAA‑AAAACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCa > 2:5488715/1‑119 (MQ=255) cGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑CCAAAA‑AAAACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTc > 1:7256783/1‑140 (MQ=255) gggCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑CCAAAA‑AAAACCGGCGCAATGGc < 1:7450251/59‑1 (MQ=255) gggCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑CCAAAA‑AAAACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTCCTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCt > 2:392187/1‑140 (MQ=255) ggCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑CCAAAA‑AAAACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCTg < 2:3169940/140‑1 (MQ=255) ggCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑CCAAAA‑AAAACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCTg < 1:4617116/140‑1 (MQ=255) aatTCGCGAAGATACTTAAGAACTCAGG‑CCAAAA‑AAAACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCTGATAACCg < 2:2813154/140‑1 (MQ=255) aatTCGCGAAGATAATTAAGAACTCAGG‑CCAAAA‑AAAACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCTGATAACCg < 2:1550411/140‑1 (MQ=255) aatTCGCGAAGATAATTAAGAACTCAGG‑CCAAAA‑AAAACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCTGATAACCg < 1:2043019/140‑1 (MQ=255) cgAAGATAATTAAGAACTCAGG‑CCAAAA‑AAAACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCTGATAACCGGAGTtg < 1:7153439/140‑1 (MQ=255) cgAAGATAATTAAGAACTCAGG‑CCAAAA‑AAAACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCTGATAACCGGAGTtg < 1:6517240/140‑1 (MQ=255) aaGATAATTAAGAACTCAGG‑CCAAAA‑AAAACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCTGATAACCGGAGTtgat < 2:9263093/140‑1 (MQ=255) aTAATTAAGAACTCAGG‑CCAAAA‑AAAACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCTGATAACCGGAGTTGATGAc < 1:10827002/140‑1 (MQ=255) tAAGAACTCAGG‑CCAAAA‑AAAACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCTGATAACCGGAGTTGATGACATGTc < 2:2655095/140‑1 (MQ=255) tAAGAACTCAGG‑CCAAAA‑AAAACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCTGATAACCGGAGTTGATGACATGTc < 2:220272/140‑1 (MQ=255) aaCTCAGG‑CCAAAA‑AAAACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCTGATAACCGGAGTTGATGACATGTCCGGt < 1:7593205/140‑1 (MQ=255) aaCTCAGG‑CCAAAA‑AAAACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCTGATAACCGGAGTTGATGACATGTCCGGt < 1:9231341/140‑1 (MQ=255) aaCTCAGG‑CCAAAA‑AAAACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCTGATAACCGGAGTTGATGACATGTCCGGt < 2:1001793/140‑1 (MQ=255) aCTCAGG‑CCAAAA‑AAAACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCTGATAACCGGAGTTGATGACATGTCCGGTa < 1:7953438/140‑1 (MQ=255) aCTCAGG‑CCAAAA‑AAAACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCTGATAACCGGAGTTGATGACATGTCCGGTa < 2:6555266/140‑1 (MQ=255) aCTCAGG‑CCAAAA‑AAAACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCTGATAACCGGAGTTGATGACATGTCCGGTa > 1:2527239/1‑140 (MQ=255) aCTCAGG‑CCAAAA‑AAAACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCTGATAACCGGAGTTGATGACATGTCCGGTa > 2:5768982/1‑140 (MQ=255) tCAGG‑CCAAAA‑AAAACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGca < 2:4149813/102‑1 (MQ=255) | TGGCTGAAAGGAGTATACGGTATAGACCTGAGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑CC‑AAA‑AAAACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCTGATAACCGGAGTTGATGACATGTCCGGTATCAT > NZ_CP025268/1826539‑1826810 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |